The patterns of base sequences in the nucleic acids of prokaryotes and eukaryotes reflect features of their abiotic past.

The base sequences of the nucleic acids corresponding to ten proteins (aconitase, alcohol dehydrogenase, enolase, fumarase, isocitrate dehydrogenase, lactate dehydrogenase, phosphofructokinase, phosphoglycerate mutase, pyruvate kinase and succinate dehydrogenase) belonging to a total of 154 species, ranging from prokaryotes to vertebrates, were compared with the base sequences of oligoribotides whose growth rates were calculated by a chemical kinetics model. It was shown that oligoribotides grown according to the kinetics model have a fraction of repetitive bases larger than expected from random processes. The base sequences of nucleic acids of prokaryotes and eukaryotes retain, in decreasing proportions, this feature of their abiotic past. Chemically synthesized pentameric stretches with repetitive bases are slightly more abundant than those present in prokaryotes. Genetic drift and natural selection, operating as fundamental laws even for the most primitive living systems, reduced the original, chemically controlled, repetitive base frequency in prokaryotes, which was further reduced for eukaryotes.

Aqueous two-phase systems extraction of alpha-toxin from Clostridium perfringens type A.

Two sequential half-fraction designs were applied to studying the alpha-toxin partition produced by Clostridium perfringens type A in aqueous two phase systems (ATPS), as a function of four factors: PEG molar mass and concentration, phosphate concentration and pH. The highest purification factor, yield and partition coefficient results were obtained with PEG 8000 (15%, w/w), phosphate at 20% (w/w) and pH 8.0. This system allows, in a single step, an alpha-toxin purification of 4.6-fold with final activity yield of 230% and partition coefficient of 113.9 in the PEG rich phase.

Extraction and recovery of chromium from electroplating sludge.

This work reports a study of the extraction and recovery of chromium from the wastes (class I dangerous) generated by a galvanic manufacturer. Commercial HCl at room temperature was employed, and the conditions of the extraction process were optimized according to a sequential experimental design, which also included the acid concentration and contact time as variables. The best extraction conditions (80% v/v; 30 min; 97.6% Cr) for the chromic sludge were chosen in order to make the recovery process economically feasible. After each extraction, the residue was submitted to leaching essays, to assess environmental risks. It was found that sludge could be characterized as no longer dangerous. In the recovery study, a simple and low-cost technique was evaluated for selectivity based on an oxidation step with hydrogen peroxide. A 2(3) factorial design to assess the influence of oxidation time (min), temperature ( degrees C) and peroxide amount (mol/L) was employed. The best conditions, yielding a chromium recovery of about 92%, were a time of 60 min, a temperature of 60 degrees C and 2.1 mol/L peroxide. Additional essays revealed that the same result could be obtained with more economic conditions (40 min, 1.4 mol/L peroxide and 60 degrees C). This technique proved not only effective in comparison with existing alternatives, but also low costing.

Effect of medium components and time of cultivation on chitin production by Mucor circinelloides (Mucor javanicus IFO 4570) -- a factorial study.

Chitin production of mycelia from Mucor circinelloides (Mucor javanicus) was studied with a two-level factorial design in all combinations of the following factors in the culture medium: time of cultivation, concentration of D-glucose, L-asparagine and thiamine. Chitin was characterised by infrared and nuclear magnetic resonance spectroscopy. The four factors showed statistically significant (95%) positive main effects on chitin production, without interactions between them. The highest chitin yield (23.9%) was obtained with the medium containing 60 g/l of glucose, 3 g/l of asparagine and 0.008 mg/l of thiamine and is comparable to the highest in the literature.

Do older taxa have older proteins?

We have confirmed through an enlarged set of 728 species with 10,000 or more compiled codons, and a subset of 237 species with at least 50,000 compiled codons, that the mean values of a previously described index phi [the mean value of the ratio between the relative (G, C) content of Class II and Class I codons, where G and C are guanine and cytosine] decrease monotonically across five large taxa, viz archaea, bacteria, eukaryotes (excluding metazoa), metazoa (excluding vertebrates) and vertebrates. It is proposed that these main taxa diverge successively from an ancestral progenome along lines which have persisted over long periods of time, leading to a primordial non-symmetrical phylogenetic tree. Further divergence, i.e. from eukaryotes to plants, fungi and protozoans, has followed symmetrical branching with approximately equal numbers of replacements and fixations. A statistical analysis of the phi values of twelve distinct proteins, distributed over more than one thousand species belonging to the five main groups, was made to verify whether older taxa have older proteins. This supposition was confirmed for the first four taxa, but it was inconclusive for the last pair, metazoa/vertebrates.

Chitosan effect on dental enamel de-remineralization: an in vitro evaluation.

OBJECTIVES: The aim of this work was to evaluate the in vitro effect of chitosan (concentration and time of action) treatment on enamel de-remineralization behavior upon a pH cycling assay. METHODS: Different group of human tooth samples were exposed to de-remineralizing solutions of controlled pH using a random experimental design. Microhardness and phosphorus chemical analysis were employed to evaluate the loss of phosphorus from the samples. Optical coherence tomography (OCT) images were obtained for selected specimens in order to evaluate the degree of penetration of chitosan into enamel. RESULTS: Vickers microhardness results were higher for samples treated with chitosan for concentration between 2.5mg/mL and 5.0mg/mL and time of action between 60s and 90 s. A maximum inhibition of mineral loss of 81% was obtained. Chemical analysis indicated lower net pohosphorus loss (net P loss) for samples treated with chitosan. Best results were obtained in the same conditions found out with microhardness measurements. Chitosan had little effect on the remineralization process. OCT results indicated a correlation of chitosan penetration with chitosan concentration. For chitosan concentrations of 2.5 g/mL and 5.0 g/mL the penetration was up to the dentin-enamel junction. CONCLUSIONS: Chitosan interferes with the process of demineralization of the tooth enamel inhibiting the release of phosphorus in this laboratory study. Demineralization is influenced by the concentration and exposure time of the biopolymer to the enamel. Microhardness measurements may be used as an indication of mineral loss from tooth enamel. Additionally, OCT images support the idea that chitosan may act as a barrier against acid penetration, contributing to its demineralization inhibition.

Behaviour of chemical modifiers in the determination of arsenic by electrothermal atomic absorption spectrometry in petroleum products.

Most comparative studies on the efficiency of chemical modifiers have been conducted in aqueous media. In the present work, we proposed a detailed study of the use of different chemical modifiers for direct determination of arsenic in complex organic matrices by electrothermal atomic absorption spectrometry (ETAAS). Palladium, rhodium, tungsten, silver, lanthanum and a mixture of palladium and magnesium were tested. The figures of merit used for evaluation and comparison were acquired in the optimal conditions for each modifier, established by multivariate optimization of the main variables based on Doehlert designs. Singular features were observed for the chemical behaviour of some modifiers in organic matrices compared to aqueous media, such as the worse performance of Pd+Mg modifier and no notice of severe tube corrosion from La application. Lanthanum was chosen as the best chemical modifier for the present application, according to predefined criteria. Lanthanum showed the minimum limit of detection, characteristic concentration and blank signal among all tested species and no effect of the concomitants usually present in petrochemical feedstocks. Using a 200mgL(-1) lanthanum solution as a chemical modifier, the average relative standard deviations of 7 and 16% (at 3-15mugL(-1) level) and characteristic concentrations of 0.47 and 0.77mugL(-1) for naphtha and petroleum condensates, respectively, were observed.