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1.
BMC Microbiol ; 24(1): 340, 2024 Sep 12.
Artículo en Inglés | MEDLINE | ID: mdl-39266945

RESUMEN

BACKGROUND: Along bacteria, yeasts are common in forages and forage fermentations as spoilage microbes or as additives, yet few studies exist with species-level data on these fungi's occurrence in feedstuff. Active dry yeast and other yeast-based products are also common feed additives in animal husbandry. Here, we aimed to characterize both fermented and non-fermented milking cow feedstuff samples from Hungary to assess their microbial diversity in the first such study from Central Europe. RESULTS: We applied long-read bacterial metabarcoding to 10 fermented and 25 non-fermented types of samples to assess bacterial communities and their characteristics, surveyed culturable mold and yeast abundance, and identified culturable yeast species. Fermented forages showed the abundance of Aerococcaceae, Bacillaceae, Brucellaceae, Lactobacillaceae, Staphylococcaceae, and Thermoactinomycetaceae, non-fermented ones had Cyanothecaceae, Enterobacteriaceae, Erwiniaceae, Gomontiellaceae, Oxalobacteraceae, Rhodobiaceae, Rickettsiaceae, and Staphylococcaceae. Abundances of bacterial families showed mostly weak correlation with yeast CFU numbers, only Microcoleaceae (positive) and Enterococcaceae and Alcaligenaceae (negative correlation) showed moderate correlation. We identified 14 yeast species, most commonly Diutina rugosa, Pichia fermentans, P. kudriavzevii, and Wickerhahomyces anomalus. We recorded S. cerevisiae isolates only from animal feed mixes with added active dry yeast, while the species was completely absent from fermented forages. The S. cerevisiae isolates showed high genetic uniformity. CONCLUSION: Our results show that both fermented and non-fermented forages harbor diverse bacterial microbiota, with higher alpha diversity in the latter. The bacterial microbiome had an overall weak correlation with yeast abundance, but yeasts were present in the majority of the samples, including four new records for forages as a habitat for yeasts. Yeasts in forages mostly represented common species including opportunistic pathogens, along with a single strain of Saccharomyces used as a feed mix additive.


Asunto(s)
Alimentación Animal , Bacterias , Fermentación , Ganado , Levaduras , Animales , Hungría , Levaduras/clasificación , Levaduras/aislamiento & purificación , Levaduras/genética , Bacterias/clasificación , Bacterias/genética , Bacterias/aislamiento & purificación , Alimentación Animal/microbiología , Alimentación Animal/análisis , Ganado/microbiología , Bovinos/microbiología , Microbiota/genética , Biodiversidad
2.
BMC Microbiol ; 24(1): 306, 2024 Aug 16.
Artículo en Inglés | MEDLINE | ID: mdl-39152378

RESUMEN

BACKGROUND: Deoxynivalenol (DON) is a type B trichothecene mycotoxin that is commonly found in cereals and grains worldwide. The presence of this fungal secondary-metabolite raises public-health concerns at both the agriculture and food industry level. Recently, we have shown that DON has a negative impact on gut integrity, a feature also noticed for Campylobacter (C.) jejuni. We further demonstrated that DON increased the load of C. jejuni in the gut and inner organs. In contrast, feeding the less toxic DON metabolite deepoxy-deoxynivalenol (DOM-1) to broilers reduced the Campylobacter load in vivo. Consequently, it can be hypothesized that DON and DOM-1 have a direct effect on the growth profile of C. jejuni. The aim of the present study was to further resolve the nature of this interaction in vitro by co-incubation and RNA-sequencing. RESULTS: The co-incubation of C. jejuni with DON resulted in significantly higher bacterial growth rates from 30 h of incubation onwards. On the contrary, the co-incubation of C. jejuni with DOM-1 reduced the CFU counts, indicating that this DON metabolite might contribute to reduce the burden of C. jejuni in birds, altogether confirming in vivo data. Furthermore, the transcriptomic profile of C. jejuni following incubation with either DON or DOM-1 differed. Co-incubation of C. jejuni with DON significantly increased the expression of multiple genes which are critical for Campylobacter growth, particularly members of the Flagella gene family, frr (ribosome-recycling factor), PBP2 futA-like (Fe3+ periplasmic binding family) and PotA (ATP-binding subunit). Flagella are responsible for motility, biofilm formation and host colonization, which may explain the high Campylobacter load in the gut of DON-fed broiler chickens. On the contrary, DOM-1 downregulated the Flagella gene family and upregulated ribosomal proteins. CONCLUSION: The results highlight the adaptive mechanisms involved in the transcriptional response of C. jejuni to DON and its metabolite DOM-1, based on the following effects: (a) ribosomal proteins; (b) flagellar proteins; (c) engagement of different metabolic pathways. The results provide insight into the response of an important intestinal microbial pathogen against DON and lead to a better understanding of the luminal or environmental acclimation mechanisms in chickens.


Asunto(s)
Campylobacter jejuni , Pollos , Transcriptoma , Tricotecenos , Tricotecenos/metabolismo , Campylobacter jejuni/efectos de los fármacos , Campylobacter jejuni/genética , Campylobacter jejuni/crecimiento & desarrollo , Campylobacter jejuni/metabolismo , Animales , Transcriptoma/efectos de los fármacos , Pollos/microbiología , Regulación Bacteriana de la Expresión Génica/efectos de los fármacos , Infecciones por Campylobacter/microbiología , Infecciones por Campylobacter/veterinaria , Alimentación Animal/microbiología
3.
Euro Surveill ; 29(18)2024 May.
Artículo en Inglés | MEDLINE | ID: mdl-38699902

RESUMEN

BackgroundThe pet industry is expanding worldwide, particularly raw meat-based diets (RMBDs). There are concerns regarding the safety of RMBDs, especially their potential to spread clinically relevant antibiotic-resistant bacteria or zoonotic pathogens.AimWe aimed to investigate whether dog food, including RMBD, commercially available in Portugal can be a source of Salmonella and/or other Enterobacteriaceae strains resistant to last-line antibiotics such as colistin.MethodsFifty-five samples from 25 brands (21 international ones) of various dog food types from 12 suppliers were screened by standard cultural methods between September 2019 and January 2020. Isolates were characterised by phenotypic and genotypic methods, including whole genome sequencing and comparative genomics.ResultsOnly RMBD batches were contaminated, with 10 of 14 containing polyclonal multidrug-resistant (MDR) Escherichia coli and one MDR Salmonella. One turkey-based sample contained MDR Salmonella serotype 1,4,[5],12:i:- ST34/cgST142761 with similarity to human clinical isolates occurring worldwide. This Salmonella exhibited typical antibiotic resistance (bla TEM + strA-strB + sul2 + tet(B)) and metal tolerance profiles (pco + sil + ars) associated with the European epidemic clone. Two samples (turkey/veal) carried globally dispersed MDR E. coli (ST3997-complexST10/cgST95899 and ST297/cgST138377) with colistin resistance (minimum inhibitory concentration: 4 mg/L) and mcr-1 gene on IncX4 plasmids, which were identical to other IncX4 circulating worldwide.ConclusionSome RMBDs from European brands available in Portugal can be a vehicle for clinically relevant MDR Salmonella and pathogenic E. coli clones carrying genes encoding resistance to the last-line antibiotic colistin. Proactive actions within the One Health context, spanning regulatory, pet-food industry and consumer levels, are needed to mitigate these public health risks.


Asunto(s)
Antibacterianos , Escherichia coli , Carne , Salmonella , Animales , Salmonella/aislamiento & purificación , Salmonella/genética , Salmonella/efectos de los fármacos , Humanos , Portugal , Escherichia coli/aislamiento & purificación , Escherichia coli/genética , Escherichia coli/efectos de los fármacos , Perros , Antibacterianos/farmacología , Carne/microbiología , Farmacorresistencia Bacteriana Múltiple/genética , Mascotas/microbiología , Secuenciación Completa del Genoma , Microbiología de Alimentos , Pruebas de Sensibilidad Microbiana , Proteínas de Escherichia coli/genética , Colistina/farmacología , Alimentación Animal/microbiología , Infecciones por Escherichia coli/microbiología , Infecciones por Escherichia coli/epidemiología
4.
J Sci Food Agric ; 104(12): 7678-7687, 2024 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-38775588

RESUMEN

BACKGROUND: The recurrent contaminations of feed materials with mycotoxigenic fungi can endanger both farmed animals and humans. Biosynthesized nanomaterials are assumingly the ideal agents to overcome fungal invasion in feed/foodstuffs, especially when utilizing sustainable sources for synthesis. Herein, the phycosynthesis of selenium nanoparticles (SeNPs) was targeted using Cystoseira myrica algal extract (CE), and the conjugation of CE/SeNPs with chitosan nanoparticles (NCt) to produce potential antifungal nanocomposites for controlling Aspergillus flavus isolates in fish feed. RESULTS: The phycosynthesis of SeNPs with CE was effectually carried out and validated using visible/UV analysis, X-ray diffraction and transmission microscopy; CE/SeNPs had diameters of 8.7 nm and spherical shapes. NCt/CE/SeNPs nanocomposite (173.3 nm mean diameter) was achieved and the component interactions were validated via infrared spectroscopic analysis. The antifungal assessment of screened nanomaterials against three Aspergillus flavus strains indicated that NCt/CE/SeNPs exceeded the fluconazole action using qualitative/quantitative assays. Severe alteration/distortions in A. flavus mycelial structure and morphology were microscopically observed within 48 h of NCt/CE/SeNPs treatment. The treatment of feed ingredients (crushed corn and feed powder) by blending with nanomaterials (NCt, CE/SeNPs and NCt/CE/SeNPs) led to significant reduction in A. flavus count/growth after storage for 7 days; NCt/CE/SeNPs could completely inhibit any fungal growth in feed material. CONCLUSION: The pioneering phycosynthesis of CE/SeNPs and their nanoconjugation with NCt generated bioactive antifungal agents to control A. flavus strains. The innovatively constructed NCt/CE/SeNPs nanocomposite is advised for application as an effectual, biosafe and natural fungicidal conjugate for the protection of fish feed from mycotoxigenic fungi. © 2024 Society of Chemical Industry.


Asunto(s)
Alimentación Animal , Aspergillus flavus , Quitosano , Peces , Nanopartículas , Selenio , Quitosano/química , Quitosano/farmacología , Alimentación Animal/análisis , Alimentación Animal/microbiología , Aspergillus flavus/efectos de los fármacos , Aspergillus flavus/crecimiento & desarrollo , Aspergillus flavus/metabolismo , Animales , Peces/microbiología , Selenio/química , Selenio/farmacología , Nanopartículas/química , Antifúngicos/farmacología , Antifúngicos/química , Contaminación de Alimentos/prevención & control , Contaminación de Alimentos/análisis , Aflatoxinas/metabolismo , Nanocompuestos/química
5.
World J Microbiol Biotechnol ; 40(10): 293, 2024 Aug 08.
Artículo en Inglés | MEDLINE | ID: mdl-39112831

RESUMEN

Probiotics are live microorganisms that, when administered in adequate quantities, provide health benefits to the host. In this study, phenotypic and genotypic methods were used to evaluate the probiotic properties of Bacillus altitudinis 1.4. The isolate was sensitive to all antimicrobials tested and presented a positive result in the hemolysis test. B. altitudinis 1.4 spores were more resistant than vegetative cells, when evaluated in simulation of cell viability in the gastrointestinal tract, as well as adhesion to the intestinal mucosa. The isolate was capable of self-aggregation and coaggregation with pathogens such as Escherichia coli ATCC 25922 and Salmonella Enteritidis ATCC 13076. Genomic analysis revealed the presence of genes with probiotic characteristics. From this study it was possible to evaluate the gene expression of pro-inflammatory and anti-inflammatory cytokines for different treatments. Viable vegetative cells of B. altitudinis 1.4 increased the transcription of pro-inflammatory factors, in addition to also increasing the transcription of IL-10, indicating a tendency to stimulate a pro-inflammatory profile. Given the results presented, B. altitudinis 1.4 showed potential to be applied in the incorporation of this microorganism into animal feed, since the spores could tolerate the feed handling and pelletization processes.


Asunto(s)
Bacillus , Genoma Bacteriano , Probióticos , Probióticos/farmacología , Bacillus/genética , Factores Inmunológicos/farmacología , Citocinas/metabolismo , Citocinas/genética , Escherichia coli/genética , Esporas Bacterianas/genética , Adhesión Bacteriana , Salmonella enteritidis/genética , Alimentación Animal/microbiología , Antibacterianos/farmacología , Animales
6.
Rev Argent Microbiol ; 56(2): 191-197, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38272730

RESUMEN

Water kefir is a sparkling, slightly acidic fermented beverage made from sugar, water, and water kefir grains, which are a mixture of yeast and bacteria. These grains produce a variety of fermentation compounds such as lactic acid, acetaldehyde, acetoin, ethanol and carbon dioxide. In this study, a high-throughput sequencing technique was used to characterize the bacterial composition of the original water kefir from which potential probiotics were obtained. We studied the bacterial diversity of both water kefir grains and beverages. DNA was extracted from three replicate samples of both grains and beverages using the Powerlyzer Microbial Kit. The hypervariable V1-V2 region of the bacterial 16S ribosomal RNA gene was amplified to prepare six DNA libraries. Between 1.4M and 2.4M base-pairs were sequenced for the library. In total, 28721971 raw reads were obtained from all the samples. Estimated species richness was higher in kefir beverage samples compared to grain samples. Moreover, a higher level of microbial alpha diversity was observed in the beverage samples. Particularly, the predominant bacteria in beverages were Anaerocolumna and Ralstonia, while in grains Liquorilactobacillus dominated, with lower levels of Leuconostoc and Oenococcus. Although the bacterial diversity in kefir grains was low because only three genera were the most represented, all of them are LAB bacteria with the potential to serve as probiotics in the artificial feeding of bees.


Asunto(s)
Bacterias , Kéfir , Metagenómica , Probióticos , ARN Ribosómico 16S , Animales , Abejas/microbiología , Kéfir/microbiología , ARN Ribosómico 16S/genética , Metagenómica/métodos , Bacterias/aislamiento & purificación , Bacterias/genética , Bacterias/clasificación , ADN Bacteriano/análisis , Biodiversidad , ADN Ribosómico/genética , Alimentación Animal/microbiología
7.
J Appl Microbiol ; 133(2): 1078-1088, 2022 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-35611609

RESUMEN

AIMS: Bacillus cereus is often responsible for foodborne diseases and both local and systemic infections in humans. Cases of infection in other mammals are rather rare. In this study, we report a B. cereus feed-related outbreak that caused the death of 6234 pigs in Italy. METHODS AND RESULTS: Massive doses of a Gram-positive, spore-forming bacterium were recovered from the animal feed, faeces of survived pigs and intestinal content of dead ones. The B. cereus MM1 strain was identified by MALDI-TOF MS and typified by RAPD-PCR. The isolate was tested for the production of PC-PLC, proteases, hemolysins and biofilm, for motility, as well as for the presence of genes encoding tissue-degrading enzymes and toxins. Antimicrobial resistance and pathogenicity in Galleria mellonella larvae were also investigated. Our results show that the isolated B. cereus strain is swimming-proficient, produces PC-PLC, proteases, hemolysins, biofilm and carries many virulence genes. The strain shows high pathogenicity in G. mellonella larvae. CONCLUSIONS: The isolated B. cereus strain demonstrates an aggressive profile of pathogenicity and virulence, being able to produce a wide range of determinants potentially hazardous to pigs' health. SIGNIFICANCE AND IMPACT OF STUDY: This study highlights the proficiency of B. cereus to behave as a devastating pathogen in swine if ingested at high doses and underlines that more stringent quality controls are needed for livestock feeds and supplements.


Asunto(s)
Alimentación Animal , Bacillus cereus , Infecciones por Bacterias Grampositivas , Proteínas Hemolisinas , Alimentación Animal/microbiología , Animales , Bacillus cereus/genética , Bacillus cereus/patogenicidad , Brotes de Enfermedades , Bacterias Grampositivas , Infecciones por Bacterias Grampositivas/microbiología , Infecciones por Bacterias Grampositivas/veterinaria , Proteínas Hemolisinas/genética , Larva/microbiología , Mariposas Nocturnas/microbiología , Péptido Hidrolasas , Técnica del ADN Polimorfo Amplificado Aleatorio , Esporas Bacterianas , Porcinos
8.
Regul Toxicol Pharmacol ; 129: 105126, 2022 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-35065094

RESUMEN

Asterarcys quadricellulare (AQ) is a microalgal species with potential applications in improving the quality of animal feed, and safety studies on this species are lacking. Therefore, this study presents safety data on an industrially cultivated strain of AQ tested using the following Organisation for Economic Co-operation and Development (OECD) guidelines: acute skin irritation in rabbits; skin sensitisation in guinea pigs; acute eye irritation in rabbits; acute oral fixed-dose procedure in rats; and bacterial reverse mutation using the B.N. Ames technique. Results showed that AQ is non-irritant and non-sensitising to skin. AQ caused transient conjunctival lacrimation and redness; however, the scores for these clinical signs translated into low ocular irritation indices and classification of AQ as non-irritant to the eyes. An acute oral dose of AQ (2000 mg/kg) did not cause mortality, change in body weight gain, or any general, functional, and neurobehavioral clinical signs. In five strains of Salmonella typhimurium bacteria, treatment with AQ did not cause biologically or statistically significant changes in the number of revertant colonies, indicating that AQ does not cause mutagenic toxicity. This study demonstrates the safety of a heterotrophically-produced strain of AQ and supports its use as a safe and non-toxic feed ingredient.


Asunto(s)
Alimentación Animal/microbiología , Crianza de Animales Domésticos , Chlorophyceae , Microalgas , Animales , Relación Dosis-Respuesta a Droga , Ojo/efectos de los fármacos , Cobayas , Pruebas de Mutagenicidad , Conejos , Ratas , Piel/efectos de los fármacos
9.
Genomics ; 113(6): 4061-4074, 2021 11.
Artículo en Inglés | MEDLINE | ID: mdl-34678442

RESUMEN

The present study describes genome annotation and phenotypic characterization of Bacillus velezensis ZBG17 and evaluation of its performance as antibiotic growth promoter substitute in broiler chickens. ZBG17 comprises 3.89 Mbp genome with GC content of 46.5%. ZBG17 could tolerate simulated gastrointestinal juices prevalent in the animal gut. Some adhesion-associated genomic features of ZBG17 supported the experimentally determined cell surface hydrophobicity and cell aggregation results. ZBG17 encoded multiple secondary metabolite gene clusters correlating with its broad-spectrum antibacterial activity. Interestingly, ZBG17 completely inhibited Salmonella enterica and Escherichia coli within 6 h and 8 h in liquid co-culture assay, respectively. ZBG17 genome analysis did not reveal any genetic determinant associated with reported safety hazards for use as a poultry direct-fed microbial. Dietary supplementation of ZBG17 significantly improved feed utilization efficiency and humoral immune response in broiler chickens, suggesting its prospective application as a direct-fed microbial in broiler chickens.


Asunto(s)
Pollos , Probióticos , Alimentación Animal/análisis , Alimentación Animal/microbiología , Animales , Antibacterianos/farmacología , Bacillus , Pollos/genética , Dieta/veterinaria , Probióticos/farmacología
10.
J Sci Food Agric ; 102(3): 1193-1204, 2022 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-34343355

RESUMEN

BACKGROUND: Feed shortage is a factor restricting animal production in the tropics, therefore how to use natural woody plant resources as animal feed is an important strategy. RESULTS: Under the dual stress of an anaerobic and acidic environment, the microbial response during the fermentation of paper mulberry (PM) silage was found to be sensitive. The Gram-negative bacteria and mould died, and the dominant microbial community rapidly shifted to Gram-positive bacteria, resulting in a large reduction in microbial diversity and abundance. Exogenous bran additives interfered with the stress effects of the woody silage environment. Wheat bran (WB) accelerated the response of microorganisms to the anaerobic stress, and lactic acid bacteria became the dominant microbial community, thereby enhancing the lactic acid fermentation of silage, affecting the metabolic pathways of microorganisms, and improving the flavour and quality of the silage. Addition of rice bran made Enterobacter and Clostridium species quickly respond to the stress of the silage environment and become the predominant bacterial groups. In particular, anaerobic and spore-forming Clostridium species showed a strong tolerance to the silage environment, leading to butyric acid fermentation and protein degradation of the silage, and reducing its fermentation quality. CONCLUSION: The PacBio single-molecule real-time (SMRT) sequencing technology accurately revealed the microbial co-occurrence network and fermentation mechanism of silage. Our results indicate that PM can be used in combination with WB to prepare high-quality silage for animal production. © 2021 Society of Chemical Industry.


Asunto(s)
Alimentación Animal/microbiología , Bacterias/metabolismo , Microbiota , Morus/química , Ensilaje/microbiología , Alimentación Animal/análisis , Animales , Bacterias/clasificación , Bacterias/genética , Bacterias/aislamiento & purificación , Ácido Butírico/análisis , Ácido Butírico/metabolismo , Fermentación , Hongos/clasificación , Hongos/genética , Hongos/aislamiento & purificación , Hongos/metabolismo , Ácido Láctico/análisis , Ácido Láctico/metabolismo , Morus/microbiología , Ensilaje/análisis , Madera/química , Madera/microbiología
11.
Environ Microbiol ; 23(1): 281-298, 2021 01.
Artículo en Inglés | MEDLINE | ID: mdl-33169932

RESUMEN

The development of effective management strategies to reduce the occurrence of diseases in aquaculture is hampered by the limited knowledge on the microbial ecology of these systems. In this study, the dynamics and dominant community assembly processes in the rearing water of Litopenaeus vannamei larviculture tanks were determined. Additionally, the contribution of peripheral microbiomes, such as those of live and dry feeds, to the rearing water microbiome were quantified. The community assembly in the hatchery rearing water over time was dominated by stochasticity, which explains the observed heterogeneity between replicate cultivations. The community undergoes two shifts that match with the dynamics of the algal abundances in the rearing water. Source tracking analysis revealed that 37% of all bacteria in the hatchery rearing water were introduced either by the live or dry feeds, or during water exchanges. The contribution of the microbiome from the algae was the largest, followed by that of the Artemia, the exchange water and the dry feeds. Our findings provide fundamental knowledge on the assembly processes and dynamics of rearing water microbiomes and illustrate the crucial role of these peripheral microbiomes in maintaining health-promoting rearing water microbiomes.


Asunto(s)
Alimentación Animal/microbiología , Artemia/microbiología , Bacterias/crecimiento & desarrollo , Bacterias/metabolismo , Penaeidae/microbiología , Animales , Acuicultura , Enfermedades de los Peces/epidemiología , Enfermedades de los Peces/microbiología , Enfermedades de los Peces/prevención & control , Microbiota , Agua , Microbiología del Agua
12.
BMC Microbiol ; 21(1): 149, 2021 05 19.
Artículo en Inglés | MEDLINE | ID: mdl-34011262

RESUMEN

BACKGROUND: The objective of this study was to evaluate the chemical compositions and microbial communities of salt-tolerant alfalfa silage. Salt-tolerant alfalfa was ensiled with no additive control, and cellulase for 30 and 60 to 90 days. In this study, the dry matter (DM) content of the raw material was 29.9% DM, and the crude protein (CP) content of the alfalfa was 21.9% CP. RESULTS: After 30 days of fermentation, the DM content with the cellulase treatment was reduced by 3.6%, and the CP content was reduced by 12.7%. After 60 days of fermentation, compared with alfalfa raw material, the DM content in the control group (CK) was reduced by 1%, the CP content was reduced by 9.5%, and the WSC (water-soluble carbohydrates) content was reduced by 22.6%. With the cellulase, the lactic acid content of the 30- and 60-day silages was 2.66% DM and 3.48% DM. The content of Firmicutes in salinized alfalfa raw material was less than 0.1% of the total bacterial content. Before and after ensiling, the microbes had similar composition at the phylum level, and were composed of Firmicutes, Actinobacteria, Bacteroidetes, and Proteobacteria. The abundance of Pantoea was dominant in fresh alfalfa. In the absence of additives, after 30 days and 60 days of silage, the dominant lactic acid bacteria species became Lactococcus and Enterococcus. CONCLUSIONS: The results showed that LAB (Lactobacillus, Lactococcus, Enterococcus, and Pediococcus) played a major role in the fermentation of saline alfalfa silage. It also can better preserve the nutrients of saline alfalfa silage. The use of cellulase enhances the reproduction of Lactobacillus. The fermentation time would also change the microbial community of silage fermentation.


Asunto(s)
Bacterias/aislamiento & purificación , Manipulación de Alimentos/métodos , Medicago sativa/química , Medicago sativa/microbiología , Microbiota , Álcalis/metabolismo , Alimentación Animal/análisis , Alimentación Animal/microbiología , Bacterias/clasificación , Bacterias/genética , Bacterias/metabolismo , Biocatálisis , Celulasa/química , Fermentación , Medicago sativa/metabolismo , Ensilaje/análisis , Ensilaje/microbiología , Cloruro de Sodio/metabolismo
13.
Microb Cell Fact ; 20(1): 122, 2021 Jun 28.
Artículo en Inglés | MEDLINE | ID: mdl-34182992

RESUMEN

BACKGROUND: The development and utilization of probiotics had many environmental benefits for replacing antibiotics in animal production. Bacteria in the intestinal mucosa have better adhesion to the host intestinal epithelial cells compared to bacteria in the intestinal contents. In this study, lactic acid bacteria were isolated from the intestinal mucosa of broiler chickens and investigated as the substitution to antibiotic in broiler production. RESULTS: In addition to acid resistance, high temperature resistance, antimicrobial sensitivity tests, and intestinal epithelial cell adhesion, Enterococcus faecium PNC01 (E. faecium PNC01) was showed to be non-cytotoxic to epithelial cells. Draft genome sequence of E. faecium PNC01 predicted that it synthesized bacteriocin to perform probiotic functions and bacteriocin activity assay showed it inhibited Salmonella typhimurium from invading intestinal epithelial cells. Diet supplemented with E. faecium PNC01 increased the ileal villus height and crypt depth in broiler chickens, reduced the relative length of the cecum at day 21, and reduced the relative length of jejunum and ileum at day 42. Diet supplemented with E. faecium PNC01 increased the relative abundance of Firmicutes and Lactobacillus, decreased the relative abundance of Bacteroides in the cecal microbiota. CONCLUSION: E. faecium PNC01 replaced antibiotics to reduce the feed conversion rate. Furthermore, E. faecium PNC01 improved intestinal morphology and altered the composition of microbiota in the cecum to reduce feed conversion rate. Thus, it can be used as an alternative for antibiotics in broiler production to avoid the adverse impact of antibiotics by altering the gut microbiota.


Asunto(s)
Antibacterianos/farmacología , Pollos/crecimiento & desarrollo , Pollos/microbiología , Enterococcus faecium/fisiología , Intestinos/efectos de los fármacos , Intestinos/microbiología , Probióticos , Alimentación Animal/análisis , Alimentación Animal/microbiología , Animales , Bacteriocinas/farmacología , Ciego/anatomía & histología , Ciego/efectos de los fármacos , Suplementos Dietéticos/microbiología , Microbioma Gastrointestinal/efectos de los fármacos , Íleon/anatomía & histología , Íleon/efectos de los fármacos , Mucosa Intestinal/microbiología , Yeyuno/anatomía & histología , Yeyuno/efectos de los fármacos , Masculino , ARN Ribosómico 16S
14.
J Appl Microbiol ; 130(6): 2141-2146, 2021 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-33190398

RESUMEN

AIMS: In this study, we sought to determine the incidence and diversity of Salmonella in a broad collection of commercial animal feeds collected from animal feed mills across the United States over an 11-month period and utilize CRISPR analysis to identify individual serovars. METHODS AND RESULTS: Over two independent trials, 387 feed samples from 135 different animal feed mills in the United States were screened for Salmonella. A total of 6·2% (24/387) of samples were contaminated with Salmonella, which is concordant with similar studies. Clustered regularly interspaced short palindromic repeats (CRISPR)-typing was used to serotype Salmonella isolates, and serovars Infantis and Tennessee were the most common. CONCLUSIONS: Serogroups O:4 and O:7 were enriched in the feed samples, suggesting that these serogroups are better adapted to surviving in low moisture animal feeds. The study supports the utility of CRISPR to determine serovar type since most of the serovars identified in this study have been also isolated and identified in earlier studies using more classical serotyping methods. SIGNIFICANCE AND IMPACT OF THE STUDY: This work contributes to a growing body of literature concerning the Salmonella prevalence in animal feeds and highlights the need to effectively mitigate pathogens in livestock and poultry feed.


Asunto(s)
Alimentación Animal/microbiología , Salmonella enterica/clasificación , Salmonella enterica/genética , Animales , Técnicas de Tipificación Bacteriana , Repeticiones Palindrómicas Cortas Agrupadas y Regularmente Espaciadas , ADN Bacteriano , Incidencia , Tipificación Molecular , Reacción en Cadena de la Polimerasa , Salmonelosis Animal/epidemiología , Salmonella enterica/aislamiento & purificación , Serogrupo , Serotipificación , Estados Unidos/epidemiología
15.
J Appl Microbiol ; 130(3): 852-864, 2021 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-32816375

RESUMEN

AIMS: The aims of the study were to (i) improve the evaluation criteria of detoxifying Jatropha curcas L. cake (JCC), (ii) isolate and characterize a JCC tolerant strain, (iii) explore its JCC detoxifying potential. METHODS AND RESULTS: The zebrafish was employed as a survival model to screen the strains capable of detoxifying JCC. A strain identified as Mucor circinelloides SCYA25, which is highly capable of degrading all toxic components, was isolated from soil. Different solid-state fermentation parameters were optimized by response surface methodology. The optimal values for inoculation amount, moisture content, temperature, and time were found to be 18% (1·8 × 106 spores g-1 cake), 66%, 26, and 36 days, respectively, to achieve maximum detoxification of the JCC (92%). Under optimal fermentation conditions, the protein content of JCC was increased, while the concentrations of ether extract, crude fiber, toxins, and anti-nutritional substances were all degraded considerably (P < 0·05). Scanning electron microscopy and Fourier transform infrared spectrometer analysis revealed that the fermentation process could disrupt the surface structure and improve the ratio of α-helix to ß-folding in the JCC protein, which may improve the digestibility when the detoxified JCC is used as a feedstuff. CONCLUSIONS: Our results indicate that M. circinelloides SCYA25 is able to detoxify JCC and improve its nutritional profile, which is beneficial to the safe utilization of JCC as a protein feedstuff. SIGNIFICANCE AND IMPACT OF THE STUDY: The newly identified M. circinelloides SCYA25 detoxified JCC in a safe manner to provide a potential alternative to soybean meal for the feed industry. These results also provide a new perspective and method for the toxicity evaluation and utilization of JCC and similar toxic agricultural by-products.


Asunto(s)
Jatropha/metabolismo , Mucor/metabolismo , Eliminación de Residuos/métodos , Microbiología del Suelo , Toxinas Biológicas/metabolismo , Alimentación Animal/microbiología , Animales , Biodegradación Ambiental , Fermentación , Jatropha/química , Jatropha/toxicidad , Mucor/aislamiento & purificación , Toxinas Biológicas/análisis , Toxinas Biológicas/toxicidad , Pez Cebra
16.
J Appl Microbiol ; 130(2): 356-369, 2021 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-32681565

RESUMEN

AIMS: To investigate the microbiological and nutritional quality of liquid finisher pig feed on commercial production units and the factors influencing this. METHODS AND RESULTS: Microbiological and physio-chemical analyses were performed on liquid feed sampled from the mixing tank and troughs of the finisher section of eight commercial pig units. Lactic acid bacteria, yeast and Escherichia coli counts, as well as lactic acid, ethanol and acetate concentrations were higher in residual feed sampled from the troughs compared with mixing tank samples (P < 0·001). Feed pH, as well as lysine, methionine and threonine concentrations and gross energy were all lower in the residual trough samples (P < 0·001). Liquid co-products reduced E. coli counts in the residual trough samples (P < 0·05), pH in the mixing tank (P < 0·01) and fresh trough samples (P < 0·05) and mould counts at all three sampling locations (P < 0·01) but sanitation practices had no impact. CONCLUSIONS: Even when considered unfermented, a considerable degree of spontaneous fermentation occurs in liquid feed, with resultant negative effects on nutritional quality. SIGNIFICANCE AND IMPACT OF THE STUDY: This is one of the first studies showing that uncontrolled fermentation of fresh liquid pig feed is commonplace on commercial units, highlighting the need for implementation of suitable control strategies.


Asunto(s)
Alimentación Animal/microbiología , Microbiología de Alimentos , Alimentación Animal/análisis , Animales , Escherichia coli/aislamiento & purificación , Escherichia coli/metabolismo , Fermentación , Hongos/aislamiento & purificación , Hongos/metabolismo , Concentración de Iones de Hidrógeno , Lactobacillales/aislamiento & purificación , Lactobacillales/metabolismo , Porcinos , Levaduras/aislamiento & purificación , Levaduras/metabolismo
17.
J Appl Toxicol ; 41(8): 1180-1187, 2021 08.
Artículo en Inglés | MEDLINE | ID: mdl-33140417

RESUMEN

Contamination of animal feed with Fusarium spp results in accumulation of mycotoxins including deoxynivalenol. In animals, deoxynivalenol is metabolized to de-epoxy deoxynivalenol (DOM-1), which is generally considered to be a non-toxic metabolite; however, recent studies demonstrated that DOM-1 can reduce steroid production and induce apoptosis in the bovine ovary. The objectives of this study were to assess the effects of DOM-1 on applied aspects of reproductive function in cattle, specifically sperm function and embryo development in vitro and follicle growth and superovulatory responses in vivo. The effect of naturally contaminated feed on superovulatory responses was assessed; a dose of 6 ppm deoxynivalenol increased blood DOM-1 concentrations to 20 ng/ml, but this did not alter the number of viable embryos recovered on day 7. However, intrafollicular injection of DOM-1 (100 ng/ml) directly into the growing dominant follicle resulted in cessation of follicular growth over the subsequent 3 days. Treatment with DOM-1 reduced motility of bull spermatozoa over a 10-h period in vitro. Addition of DOM-1 to oocytes in vitro during IVM did not alter rates of cumulus expansion and nuclear maturation, but treatment during IVF reduced the rate of blastocyst formation. These data illustrate that DOM-1 is more biologically active than previously thought and negatively impacted reproductive outcomes in cattle.


Asunto(s)
Desarrollo Embrionario/efectos de los fármacos , Micotoxinas/toxicidad , Motilidad Espermática/efectos de los fármacos , Tricotecenos/toxicidad , Alimentación Animal/microbiología , Alimentación Animal/toxicidad , Animales , Blastocisto/efectos de los fármacos , Bovinos , Femenino , Contaminación de Alimentos , Fusarium/metabolismo , Masculino , Micotoxinas/sangre , Oocitos/efectos de los fármacos , Superovulación/efectos de los fármacos , Tricotecenos/sangre
18.
Lett Appl Microbiol ; 73(1): 46-53, 2021 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-33756025

RESUMEN

Cellulolytic micro-organisms are potent silage inoculants that decrease the fibrous content in silage and increase the fibre digestibility and nutritional value of silage. This study aimed to evaluate the effects of Bacillus subtilis CCMA 0087 and its enzyme ß-glucosidase on the nutritional value and aerobic stability of corn silage after 30 and 60 days of storage. We compared the results among silage without inoculant (SC) and silages inoculated with B. subtilis 8 log10 CFU per kg forage (SB8), 9 log10 CFU per kg forage (SB9) and 9·84 log10 CFU per kg forage + ß-glucosidase enzyme (SBE). No differences were observed in the levels of dry matter, crude protein and neutral detergent fibre due to the different treatments or storage times of the silos. Notably, the population of spore-forming bacteria increased in the SB9-treated silage. At 60 days of ensiling, the largest populations of lactic acid bacteria were found in silages treated with SB8 and SBE. Yeast populations were low for all silages, irrespective of the different treatments, and the presence of filamentous fungi was observed only in the SBE-treated silage. Among all silage treatments, SB9 treatment resulted in the highest aerobic stability.


Asunto(s)
Alimentación Animal/microbiología , Bacillus subtilis/metabolismo , Ensilaje/microbiología , Ensilaje/normas , Zea mays/microbiología , Alimentación Animal/análisis , Alimentación Animal/normas , Fibras de la Dieta/metabolismo , Hongos/aislamiento & purificación , Lactobacillus/metabolismo , Levaduras/aislamiento & purificación
19.
Biotechnol Lett ; 43(4): 865-879, 2021 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-33387113

RESUMEN

OBJECTIVE: The application of phytases helps in releasing bound phosphorus and other nutrients in cattle feed eventually reducing the need for supplementations. However, high production cost owing to the unavailability of cheaper sources of phytases has limited their usage in developing countries. Herein, firstly isolation, identification of a phytase from fungal isolate, Aspergillus niger NT7 was carried out followed by optimizing of all production parameters, through solid-state fermentation (SSF). Secondly, crude phytase was characterized and potential applicability of crude phytase was evaluated for dephytinization of wheat bran. RESULTS: The highest phytase production (208.30 ± 0.22 U/gds) was achieved using wheat bran as cheap agro-industrial substrate for SSF. The various physiological parameters were optimized including inoculum age and level (3-day old inoculum and 15 × 107 spores/ml), temperature (35 °C), a moistening agent (distilled water), medium pH (5), and supplementation of various biochemicals like sugar (Mannitol), nitrogen (ammonium sulphate) and detergent (Tween 80). Process optimization through one variable at a time (OVAT) approach increased the difference in productivity to more than 200%. The crude phytase of A. niger NT7 was thermostable, with optimal activity at 60 °C and also displayed optimal activity over a broad range of acidic pH. Further, enhancement in phytase activity was found specifically in the presence of Ca2+, Zn2+, and Co2+ ions, while other metal ions including Fe2+, Fe3+, Mn2+, Mg2+and Cu2+ inhibited its activity. Finally, the phytase showed efficient and sustained release of inorganic phosphate, proteins, and reducing sugars (> 60 h) from livestock feed. CONCLUSION: Overall, our report highlights the production of an efficient and thermotolerant phytase with potential as a low-cost animal feed supplement.


Asunto(s)
6-Fitasa/metabolismo , Alimentación Animal/microbiología , Aspergillus niger/crecimiento & desarrollo , Animales , Aspergillus niger/enzimología , Aspergillus niger/aislamiento & purificación , Bovinos , Fibras de la Dieta/análisis , Estabilidad de Enzimas , Fermentación , Proteínas Fúngicas/metabolismo , Termotolerancia
20.
Lett Appl Microbiol ; 72(1): 36-40, 2021 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-32964486

RESUMEN

Campylobacter spp. is the leading cause of bacterial gastroenteritis worldwide and poultry are the primary reservoir. The aim of this study was to investigate the survival and/or growth of Campylobacter jejuni NCTC 11168 in broiler digestate prepared from commercial starter, grower and finisher feed formulations. Bolton broth and digestates were prepared, inoculated with C. jejuni NCTC 11168 (approximately 3 log10 CFU per ml) and incubated under microaerobic conditions at 42°C for 24 h. Samples were taken at t = 0 (immediately after inoculation) and every 3 h thereafter, serially diluted and plated onto mCCDA. Campylobacter jejuni grew as expected in Bolton broth (control) reaching the early stationary phase after approximately 15 h. In contrast, although bacterial concentrations were maintained for at least 9 h, none of the feed digestates supported the growth of C. jejuni, which were not detected after 15 h. It is suggested that the nutrients available in the feed digestates are not enough to support C. jejuni growth and that additional factors may be at play in the avian gastrointestinal tract.


Asunto(s)
Alimentación Animal/microbiología , Infecciones por Campylobacter/microbiología , Campylobacter jejuni/crecimiento & desarrollo , Pollos/microbiología , Reservorios de Enfermedades/microbiología , Gastroenteritis/microbiología , Enfermedades de las Aves de Corral/microbiología , Animales , Infecciones por Campylobacter/epidemiología , Gastroenteritis/epidemiología , Humanos
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