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1.
Zygote ; 30(6): 854-862, 2022 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-36106341

RESUMEN

Heat shock protein 90 (Hsp90) is critical for cell homeostasis but its role on bovine oocyte maturation is not well known. We investigated the importance of Hsp90 for competence of bovine oocyte using 17-(allylamino)-17-demethoxygeldanamycin (17AAG), an inhibitor of Hsp90, during in vitro maturation (IVM). Three experiments evaluated the effect of 17AAG on developmental competence of oocytes matured in vitro under thermoneutral (38.5ºC) or heat shock (HS; 41.5ºC) temperatures. The first experiment found that the blastocyst rates were lower (P < 0.05) with 2 µM 17AAG compared with the untreated control (0 µM). The abundance of HSF1 transcripts was higher in oocytes matured with 2 µM than with 0 and 1 µM 17AAG, whereas the abundance of HSP90AA1 and HSPA1A transcripts was lower (P < 0.05) with 1 and 2 µM than with 0 µM. The second experiment found that 2 µM 17AAG for 12 or 24 h during IVM decreased (P < 0.05) the blastocysts rates. In the third experiment, the association of 2 µM 17AAG with HS for 12 h during IVM resulted in lower (P < 0.05) blastocysts rates than 17AAG, HS or untreated control. In conclusion, inhibition of Hsp90 during in vitro maturation compromises further embryo development; the association of Hsp90 inhibition with HS aggravates the deleterious effect of both on oocyte developmental competence.


Asunto(s)
Técnicas de Maduración In Vitro de los Oocitos , Oocitos , Bovinos , Animales , Técnicas de Maduración In Vitro de los Oocitos/métodos , Oocitos/fisiología , Lactamas Macrocíclicas/farmacología , Lactamas Macrocíclicas/metabolismo , Respuesta al Choque Térmico , Blastocisto/fisiología , Proteínas HSP90 de Choque Térmico/genética
2.
Nat Prod Rep ; 38(6): 1136-1220, 2021 06 01.
Artículo en Inglés | MEDLINE | ID: mdl-33283831

RESUMEN

Covering from 1992 to the end of 2020-11-20.Genetically-encoded polyenic macrolactams, which are constructed by Nature using hybrid polyketide synthase/nonribosomal peptide synthase (PKSs/NRPSs) assembly lines, are part of the large collection of natural products isolated from bacteria. Activation of cryptic (i.e., silent) gene clusters in these microorganisms has more recently allowed to generate and eventually isolate additional members of the family. Having two unsaturated fragments separated by short saturated chains, the primary macrolactam is posited to undergo transannular reactions and further rearrangements thus leading to the generation of a structurally diverse collection of polycyclic (natural) products and oxidized derivatives. The review will cover the challenges that scientists face on the isolation of these unstable compounds from the cultures of the producing microorganisms, their structural characterization, biological activities, optimized biogenetic routes, as well as the skeletal rearrangements of the primary structures of the natural macrolactams derived from pericyclic reactions of the polyenic fragments. The efforts of the synthetic chemists to emulate Nature on the successful generation and structural confirmation of these natural products will also be reported.


Asunto(s)
Actinobacteria , Productos Biológicos/metabolismo , Lactamas Macrocíclicas/metabolismo , Actinobacteria/enzimología , Actinobacteria/genética , Estructura Molecular , Péptido Sintasas/metabolismo , Sintasas Poliquetidas/metabolismo , Metabolismo Secundario
3.
Appl Environ Microbiol ; 87(10)2021 04 27.
Artículo en Inglés | MEDLINE | ID: mdl-33712422

RESUMEN

Polycyclic tetramate macrolactams (PoTeMs) are a fast-growing family of antibiotic natural products found in phylogenetically diverse microorganisms. Surprisingly, none of the PoTeMs have been investigated for potential physiological functions in their producers. Here, we used heat-stable antifungal factor (HSAF), an antifungal PoTeM from Lysobacter enzymogenes, as a model to show that PoTeMs form complexes with iron ions, with an association constant (Ka ) of 2.71 × 106 M-1 The in vivo and in vitro data showed formation of 2:1 and 3:1 complexes between HSAF and iron ions, which were confirmed by molecular mechanical and quantum mechanical calculations. HSAF protected DNA from degradation in high concentrations of iron and H2O2 or under UV radiation. HSAF mutants of L. enzymogenes barely survived under oxidative stress and exhibited markedly increased production of reactive oxygen species (ROS). Exogenous addition of HSAF into the mutants significantly prevented ROS production and restored normal growth in the mutants under the oxidative stress. The results reveal that the function of HSAF is to protect the producer microorganism from oxidative damage rather than as an iron-acquisition siderophore. The characteristic structure of PoTeMs, a 2,4-pyrrolidinedione-embedded macrolactam, may represent a new iron-chelating scaffold of microbial metabolites. The study demonstrated a previously unrecognized strategy for microorganisms to modulate oxidative damage to the cells.IMPORTANCE PoTeMs are a family of structurally distinct metabolites that have been found in a large number of bacteria. Although PoTeMs exhibit diverse therapeutic properties, the physiological function of PoTeMs in the producer microorganisms had not been investigated. HSAF from Lysobacter enzymogenes is an antifungal PoTeM that has been subjected to extensive studies for mechanisms of biosynthesis, regulation, and antifungal activity. Using HSAF as a model system, we here showed that the characteristic structure of PoTeMs, a 2,4-pyrrolidinedione-embedded macrolactam, may represent a new iron-chelating scaffold of microbial metabolites. In L. enzymogenes, HSAF functions as a small-molecule modulator for oxidative damage caused by iron, H2O2, and UV light. Together, the study demonstrated a previously unrecognized strategy for microorganisms to modulate oxidative damage to the cells. HSAF represents the first member of the fast-growing PoTeM family of microbial metabolites whose potential biological function has been studied.


Asunto(s)
Lactamas Macrocíclicas/metabolismo , Lysobacter/metabolismo , Compuestos Ferrosos/farmacología , Peróxido de Hidrógeno/farmacología , Lysobacter/efectos de los fármacos , Lysobacter/efectos de la radiación , Estrés Oxidativo/efectos de los fármacos , Estrés Oxidativo/efectos de la radiación , Especies Reactivas de Oxígeno/metabolismo , Rayos Ultravioleta
4.
Mar Drugs ; 19(8)2021 Jul 31.
Artículo en Inglés | MEDLINE | ID: mdl-34436279

RESUMEN

We have previously shown deep-sea-derived Streptomyces koyangensis SCSIO 5802 to produce two types of active secondary metabolites, abyssomicins and candicidins. Here, we report the complete genome sequence of S. koyangensis SCSIO 5802 employing bioinformatics to highlight its potential to produce at least 21 categories of natural products. In order to mine novel natural products, the production of two polycyclic tetramate macrolactams (PTMs), the known 10-epi-HSAF (1) and a new compound, koyanamide A (2), was stimulated via inactivation of the abyssomicin and candicidin biosynthetic machineries. Detailed bioinformatics analyses revealed a PKS/NRPS gene cluster, containing 6 open reading frames (ORFs) and spanning ~16 kb of contiguous genomic DNA, as the putative PTM biosynthetic gene cluster (BGC) (termed herein sko). We furthermore demonstrate, via gene disruption experiments, that the sko cluster encodes the biosynthesis of 10-epi-HSAF and koyanamide A. Finally, we propose a plausible biosynthetic pathway to 10-epi-HSAF and koyanamide A. In total, this study demonstrates an effective approach to cryptic BGC activation enabling the discovery of new bioactive metabolites; genome mining and metabolic profiling methods play key roles in this strategy.


Asunto(s)
Lactamas Macrocíclicas/metabolismo , Streptomyces , Organismos Acuáticos , Genoma , Humanos , Familia de Multigenes , Fitoterapia , Secuenciación Completa del Genoma
5.
Bioorg Med Chem Lett ; 30(15): 127282, 2020 08 01.
Artículo en Inglés | MEDLINE | ID: mdl-32527461

RESUMEN

A novel 17-allylamino-17-demethoxygeldanamycin (17-AAG) glucoside (1) was obtained from in vitro enzymatic glycosylation using a UDP-glycosyltransferase (YjiC). The water-solubility of compound 1 was approximately 10.5 times higher than that of the substrate, 17-AAG. Compound 1 showed potential anti-proliferative activities against five human cancer cell lines, with IC50 values ranging from 5.26 to 28.52 µM. Further studies also indicated that compound 1 could inhibit the growth of CNE-2Z cells by inducing the degradation of Hsp90 client proteins (Akt, c-Raf, Bcl-2, and HIF-1α). In addition, compound 1 showed greater potential anti-tumor efficacy than 17-AAG in nude mice xenografted with CNE-2Z cells. Therefore, we suggest that in vitro enzymatic glycosylation is a powerful approach for the structural optimization of 17-AAG.


Asunto(s)
Antineoplásicos/farmacología , Benzoquinonas/farmacología , Glucósidos/farmacología , Glicosiltransferasas/metabolismo , Lactamas Macrocíclicas/farmacología , Uridina Difosfato/metabolismo , Animales , Antineoplásicos/química , Antineoplásicos/metabolismo , Benzoquinonas/química , Benzoquinonas/metabolismo , Línea Celular Tumoral , Proliferación Celular/efectos de los fármacos , Supervivencia Celular/efectos de los fármacos , Relación Dosis-Respuesta a Droga , Ensayos de Selección de Medicamentos Antitumorales , Glucósidos/biosíntesis , Glucósidos/química , Glicosilación , Humanos , Lactamas Macrocíclicas/química , Lactamas Macrocíclicas/metabolismo , Ratones , Ratones Desnudos , Estructura Molecular , Neoplasias Experimentales/tratamiento farmacológico , Neoplasias Experimentales/metabolismo , Neoplasias Experimentales/patología , Relación Estructura-Actividad
6.
Appl Microbiol Biotechnol ; 104(4): 1647-1660, 2020 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-31853567

RESUMEN

More than two-third of known antibiotics are produced by actinomycetes of the genus Streptomyces. Unfortunately, the production rate from Streptomyces natural antibiotic is extremely slow and thus cannot satisfy industrial demand. In this study, the production of antibiotics by Streptomyces is enhanced by a "superplasmid" which including global regulatory factors afsR, cyclic adenosine receptor protein (CRP), RNA polymerase beta subunits (rpoB) with point mutation and acetyl coenzyme A carboxylase gene (accA2BE), these elements are controlled by the PermE* promoter and then transfer into Streptomyces coelicolor M145, Streptomyces mutabilis TRM45540, Streptomyces hygroscopicus XM201, and Streptomyces hygroscopicus ATCC29253 by conjugation to generate exconjugants. NMR, HPLC, and LC-MS analyses revealed that the superplasmid led to the overproduction of actinorhodin (101.90%), undecylprodigiosin (181.60%) in S. coelicolor M145:: pLQ003, of rapamycin (110%), hygrocin A (163.4%) in S. hygroscopicus ATCC29253:: pLQ003, and of actinomycin D (11.78%) in S. mutabilis TRM45540:: pLQ003, and also to the downregulation of geldanamycin in S. hygroscopicus XM201, but we found that mutant strains in mutant strains of S. hygroscopicus XM201 with regulatory factors inserted showed several peaks that were not found in wild-type strains. The results of the present work indicated that the regulator net working in Streptomyces was not uniform, the superplasmid we constructed possibly caused this overproduction and downregulation in different Streptomyces.


Asunto(s)
Antibacterianos/biosíntesis , Ingeniería Genética/métodos , Plásmidos/genética , Streptomyces/genética , Acetil-CoA Carboxilasa/genética , Bacterias/efectos de los fármacos , Benzoquinonas/metabolismo , Dactinomicina/biosíntesis , Lactamas Macrocíclicas/metabolismo , Mutación Puntual , Regiones Promotoras Genéticas
7.
Appl Environ Microbiol ; 85(4)2019 02 15.
Artículo en Inglés | MEDLINE | ID: mdl-30530711

RESUMEN

A number of strategies have been developed to mine novel natural products based on biosynthetic gene clusters and there have been dozens of successful cases facilitated by the development of genomic sequencing. During our study on biosynthesis of the antitumor polyketide kosinostatin (KST), we found that the genome of Micromonospora sp. strain TP-A0468, the producer of KST, contains other potential polyketide gene clusters, with no encoded products detected. Deletion of kst cluster led to abolishment of KST and the enrichment of several new compounds, which were isolated and characterized as 16-demethylrifamycins (referred to here as compounds 3 to 6). Transcriptional analysis demonstrated that the expression of the essential genes related to the biosynthesis of compounds 3 to 6 was comparable to the level in the wild-type and in the kst cluster deletion strain. This indicates that the accumulation of these compounds was due to the redirection of metabolic flux rather than transcriptional activation. Genetic disruption, chemical complementation, and bioinformatic analysis revealed that the production of compounds 3 to 6 was accomplished by cross talk between the two distantly placed polyketide gene clusters pks3 and M-rif This finding not only enriches the analogue pool and the biosynthetic diversity of rifamycins but also provides an auxiliary strategy for natural product discovery through genome mining in polyketide-producing microorganisms.IMPORTANCE Natural products are essential in the development of novel clinically used drugs. Discovering new natural products and modifying known compounds are still the two main ways to generate new candidates. Here, we have discovered several rifamycins with varied skeleton structures by redirecting the metabolic flux from the predominant polyketide biosynthetic pathway to the rifamycin pathway in the marine actinomycetes species Micromonospora sp. strain TP-A0468. Rifamycins are indispensable chemotherapeutics in the treatment of various diseases such as tuberculosis, leprosy, and AIDS-related mycobacterial infections. This study exemplifies a useful method for the discovery of cryptic natural products in genome-sequenced microbes. Moreover, the 16-demethylrifamycins and their genetically manipulable producer provide a new opportunity in the construction of novel rifamycin derivates to aid in the defense against the ever-growing drug resistance of Mycobacterium tuberculosis.


Asunto(s)
Aminoglicósidos/biosíntesis , Aminoglicósidos/genética , Antibacterianos/biosíntesis , Antibacterianos/farmacología , Descubrimiento de Drogas , Micromonospora/genética , Micromonospora/metabolismo , Aminoglicósidos/farmacología , Secuencia de Bases , Vías Biosintéticas/genética , Eliminación de Gen , Lactamas Macrocíclicas/metabolismo , Familia de Multigenes/genética , Policétidos/metabolismo , Rifamicinas/biosíntesis , Metabolismo Secundario/genética
8.
Appl Microbiol Biotechnol ; 103(4): 1811-1822, 2019 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-30617535

RESUMEN

Spermidine is a common polyamine compound produced in bacteria, but its roles remain poorly understood. The bacterial SpeD encodes an S-adenosylmethionine decarboxylase that participates in spermidine synthesis. Lysobacter enzymogenes is an efficient environmental predator of crop fungal pathogens by secreting an antifungal antibiotic HSAF (heat-stable antifungal factor), while Clp is a master transcription factor essential for the antifungal activity of L. enzymogenes. In this work, we observed that speD was a close genomic neighbor of the clp gene. This genomic arrangement also seems to occur in many other bacteria, but the underlying reason remains unclear. By using L. enzymogenes OH11 as a working model, we showed that SpeD was involved in spermidine production that was essential for the L. enzymogenes antifungal activity. Spermidine altered the bacterial growth capability and HSAF production, both of which critically contributed to the L. enzymogenes antifungal activity. We further found that spermidine in L. enzymogenes was able to play a crucial, yet indirect role in maintaining the Clp level in vivo, at least partially accounting for its role in the antifungal activity. Thus, our findings suggested that spermidine probably plays an uncharacterized role in maintaining the levels of the master transcription regulator Clp to optimize its role in antifungal activity in an agriculturally beneficial bacterium.


Asunto(s)
Antifúngicos/metabolismo , Regulación Bacteriana de la Expresión Génica , Lactamas Macrocíclicas/metabolismo , Lysobacter/genética , Lysobacter/metabolismo , Espermidina/metabolismo , Factores de Transcripción/metabolismo , Orden Génico , Genoma Bacteriano , Estabilidad Proteica , Factores de Transcripción/química
9.
Biochemistry ; 57(33): 5005-5013, 2018 08 21.
Artículo en Inglés | MEDLINE | ID: mdl-30070831

RESUMEN

Leinamycin (LNM) is a potent antitumor antibiotic produced by Streptomyces atroolivaceus S-140. Both in vivo and in vitro characterization of the LNM biosynthetic machinery have established the formation of the 18-membered macrolactam backbone and the C-3 alkyl branch; the nascent product, LNM E1, of the hybrid nonribosomal peptide synthetase (NRPS)-acyltransferase (AT)-less type I polyketide synthase (PKS); and the generation of the thiol moiety at C-3 of LNM E1. However, the tailoring steps converting LNM E1 to LNM are still unknown. Based on gene inactivation and chemical investigation of three mutant strains, we investigated the tailoring steps catalyzed by two cytochromes P450 (P450s), LnmA and LnmZ, in LNM biosynthesis. Our studies revealed that (i) LnmA and LnmZ regio- and stereoselectively hydroxylate the C-8 and C-4' positions, respectively, on the scaffold of LNM; (ii) both LnmA and LnmZ exhibit substrate promiscuity, resulting in multiple LNM analogs from several shunt pathways; and (iii) the C-8 and C-4' hydroxyl groups play important roles in the cytotoxicity of LNM analogs against different cancer cell lines, shedding light on the structure-activity relationships of the LNM scaffold and the LNM-type natural products in general. These studies set the stage for future biosynthetic pathway engineering and combinatorial biosynthesis of the LNM family of natural products for structure diversity and drug discovery.


Asunto(s)
Antibióticos Antineoplásicos/biosíntesis , Sistema Enzimático del Citocromo P-450/metabolismo , Lactamas Macrocíclicas/metabolismo , Lactamas/metabolismo , Macrólidos/metabolismo , Tiazoles/metabolismo , Tionas/metabolismo , Antibióticos Antineoplásicos/química , Antibióticos Antineoplásicos/toxicidad , Vías Biosintéticas , Línea Celular Tumoral , Sistema Enzimático del Citocromo P-450/genética , Escherichia coli/genética , Silenciador del Gen , Humanos , Hidroxilación , Lactamas/química , Lactamas/toxicidad , Lactamas Macrocíclicas/química , Lactamas Macrocíclicas/toxicidad , Macrólidos/química , Macrólidos/toxicidad , Estructura Molecular , Familia de Multigenes , Estereoisomerismo , Streptomyces/genética , Relación Estructura-Actividad , Tiazoles/química , Tiazoles/toxicidad , Tionas/química , Tionas/toxicidad
10.
Int J Cancer ; 143(8): 2029-2038, 2018 10 15.
Artículo en Inglés | MEDLINE | ID: mdl-29744867

RESUMEN

Lorlatinib (PF-06463922) is a promising oral anaplastic lymphoma kinase (ALK) and ROS1 inhibitor currently in Phase III clinical trials for treatment of non-small-cell lung cancer (NSCLC) containing an ALK rearrangement. With therapy-resistant brain metastases a major concern in NSCLC, lorlatinib was designed to have high membrane and blood-brain barrier permeability. We investigated the roles of the multidrug efflux transporters ABCB1 and ABCG2, and the multispecific drug-metabolizing enzyme CYP3A in plasma pharmacokinetics and tissue distribution of lorlatinib using genetically modified mouse strains. In vitro, human ABCB1 and mouse Abcg2 modestly transported lorlatinib. Following oral lorlatinib administration (at 10 mg/kg), brain accumulation of lorlatinib, while relatively high in wild-type mice, was still fourfold increased in Abcb1a/1b-/- and Abcb1a/1b;Abcg2-/- mice, but not in single Abcg2-/- mice. Lorlatinib plasma levels were not altered. Oral coadministration of the ABCB1/ABCG2 inhibitor elacridar increased the brain accumulation of lorlatinib in wild-type mice fourfold, that is, to the same level as in Abcb1a/1b;Abcg2-/- mice, without altering plasma exposure. Similar results were obtained for lorlatinib testis accumulation. In Cyp3a-/- mice, the plasma exposure of lorlatinib was increased 1.3-fold, but was then twofold reduced upon transgenic overexpression of human CYP3A4 in liver and intestine, whereas relative tissue distribution of lorlatinib remained unaltered. Our data indicate that lorlatinib brain accumulation is substantially limited by P-glycoprotein/ABCB1 in the blood-brain barrier, but this can be effectively reversed by elacridar coadministration. Moreover, oral availability of lorlatinib is markedly restricted by CYP3A4 activity. These insights may be used in optimizing the therapeutic application of lorlatinib.


Asunto(s)
Miembro 1 de la Subfamilia B de Casetes de Unión a ATP/metabolismo , Quinasa de Linfoma Anaplásico/antagonistas & inhibidores , Encéfalo/metabolismo , Sistema Enzimático del Citocromo P-450/metabolismo , Lactamas Macrocíclicas/metabolismo , Proteínas Tirosina Quinasas/antagonistas & inhibidores , Administración Oral , Aminopiridinas , Animales , Disponibilidad Biológica , Carcinoma de Pulmón de Células no Pequeñas/tratamiento farmacológico , Carcinoma de Pulmón de Células no Pequeñas/metabolismo , Línea Celular , Perros , Femenino , Humanos , Lactamas , Lactamas Macrocíclicas/farmacología , Neoplasias Pulmonares/tratamiento farmacológico , Neoplasias Pulmonares/metabolismo , Células de Riñón Canino Madin Darby , Masculino , Ratones , Ratones Noqueados , Proyectos Piloto , Pirazoles
11.
Int J Mol Sci ; 19(7)2018 Jun 22.
Artículo en Inglés | MEDLINE | ID: mdl-29932128

RESUMEN

Alternaria alternata (Fries) Keissler is a lethal pear pathogen that causes leaf black spot disease of pear in Southern China. Heat-stable activity factor (HSAF) is a polycyclic tetramate macrolactam (PTM) produced by Lysobacter enzymogenes and many other microbes with a broad-spectrum antifungal activity against many filamentous fungi. In this study, we evaluated the antifungal effect of HSAF against A. alternata and proposed its antifungal mechanism in A. alternata. We report that HSAF inhibited the mycelial growth of A. alternata in a dose-dependent manner. Transcriptomics analysis revealed that HSAF treatment resulted in an expression alteration of a wide range of genes, with 3729 genes being up-regulated, and 3640 genes being down-regulated. Furthermore, we observed that HSAF treatment disrupted multiple signaling networks and essential cellular metabolisms in A. alternata, including the AMPK signaling pathway, sphingolipid metabolism and signaling pathway, carbon metabolism and the TCA (tricarboxylic acid) cycle, cell cycle, nitrogen metabolism, cell wall synthesis and a key hub protein phosphatase 2A (PP2A). These observations suggest that HSAF breaches metabolism networks and ultimately induces increased thickness of the cell wall and apoptosis in A. alternata. The improved understanding of the antifungal mechanism of HSAF against filamentous fungi will aid in the future identification of the direct interaction target of HSAF and development of HSAF as a novel bio-fungicide.


Asunto(s)
Alternaria/genética , Perfilación de la Expresión Génica/métodos , Regulación Fúngica de la Expresión Génica , Lactamas Macrocíclicas/metabolismo , Alternaria/efectos de los fármacos , Alternaria/fisiología , Antifúngicos/metabolismo , Antifúngicos/farmacología , Pared Celular/efectos de los fármacos , Pared Celular/microbiología , Ontología de Genes , Lactamas Macrocíclicas/farmacología , Lysobacter/metabolismo , Micelio/efectos de los fármacos , Micelio/genética , Micelio/fisiología , Enfermedades de las Plantas/microbiología , Pyrus/microbiología
12.
Chemistry ; 23(9): 2010-2013, 2017 Feb 10.
Artículo en Inglés | MEDLINE | ID: mdl-27862436

RESUMEN

The phenotypes produced when cells are treated with the heat shock protein 90 (Hsp90) inhibitors AUY922 or 17-AAG (classical inhibitors) are different to those produced when cells are knocked down with Hsp90α. Pull-down assays using classical inhibitors suggest that these molecules bind to multiple targets other than Hsp90. Classical inhibitors also induce similar protein markers as other anti-cancer therapies cisplatin and bortezomib that do not target Hsp90. Together these data suggest that AUY922 and 17-AAG acts on multiple targets and likely kills cells through multiple mechanisms. Comparing these classical inhibitors to the effects seen when treating cells with C-terminal Hsp90 modulators reveals that C-terminal modulators effectively bind to Hsp90, and induce phenotypic markers consistent with the Hsp90α CRISPR knockdown data. Our findings challenge the current interpretation of Hsp90 inhibitors and suggest that a large body of literature that describes the Hsp90 phenotype and inhibitors is re-examined in this context.


Asunto(s)
Benzoquinonas/química , Proteínas HSP90 de Choque Térmico/antagonistas & inhibidores , Isoxazoles/química , Lactamas Macrocíclicas/química , Resorcinoles/química , Benzoquinonas/metabolismo , Benzoquinonas/farmacología , Sistemas CRISPR-Cas/genética , Técnicas de Silenciamiento del Gen , Células HCT116 , Proteínas HSP70 de Choque Térmico/genética , Proteínas HSP70 de Choque Térmico/metabolismo , Proteínas HSP90 de Choque Térmico/metabolismo , Células HeLa , Factores de Transcripción del Choque Térmico/genética , Factores de Transcripción del Choque Térmico/metabolismo , Humanos , Isoxazoles/metabolismo , Isoxazoles/farmacología , Lactamas Macrocíclicas/metabolismo , Lactamas Macrocíclicas/farmacología , Fenotipo , Unión Proteica , Resorcinoles/metabolismo , Resorcinoles/farmacología , Regulación hacia Arriba/efectos de los fármacos
13.
J Ind Microbiol Biotechnol ; 44(2): 285-293, 2017 02.
Artículo en Inglés | MEDLINE | ID: mdl-27885438

RESUMEN

Genomics-based methods are now commonplace in natural products research. A phylogeny-guided mining approach provides a means to quickly screen a large number of microbial genomes or metagenomes in search of new biosynthetic gene clusters of interest. In this approach, biosynthetic genes serve as molecular markers, and phylogenetic trees built with known and unknown marker gene sequences are used to quickly prioritize biosynthetic gene clusters for their metabolites characterization. An increase in the use of this approach has been observed for the last couple of years along with the emergence of low cost sequencing technologies. The aim of this review is to discuss the basic concept of a phylogeny-guided mining approach, and also to provide examples in which this approach was successfully applied to discover new natural products from microbial genomes and metagenomes. I believe that the phylogeny-guided mining approach will continue to play an important role in genomics-based natural products research.


Asunto(s)
Productos Biológicos/análisis , Genoma Microbiano , Metagenoma , Marcadores Genéticos , Genómica , Lactamas Macrocíclicas/metabolismo , Familia de Multigenes , Filogenia , Policétidos/metabolismo
14.
Mar Drugs ; 15(9)2017 Sep 01.
Artículo en Inglés | MEDLINE | ID: mdl-28862674

RESUMEN

The aim of this research is to explore the biological and chemical diversity of bacteria associated with a marine flatworm Paraplanocera sp., and to discover the bioactive metabolites from culturable strains. A total of 141 strains of bacteria including 45 strains of actinomycetes and 96 strains of other bacteria were isolated, identified and fermented on a small scale. Bioactive screening (antibacterial and cytotoxic activities) and chemical screening (ultra-performance liquid chromatography-mass spectrometry (UPLC-MS)) yielded several target bacterial strains. Among these strains, the ethyl acetate (EA) crude extract of Streptomyces sp. XY-FW47 fermentation broth showed strong antibacterial activity against methicillin-resistant Staphylococcus aureus ATCC43300 (MRSA ATCC43300) and potent cytotoxic effects on HeLa cells. The UPLC-MS spectral analysis of the crude extract indicated that the strain XY-FW47 could produce a series of geldanamycins (GMs). One new geldanamycin (GM) analog, 4,5-dihydro-17-O-demethylgeldanamycin (1), and three known GMs (2-4) were obtained. All of these compounds were tested for antibacterial, cytotoxic, and antifungal activities, yet only GM (3) showed potent cytotoxic (HeLa cells, EC50 = 1.12 µg/mL) and antifungal (Setosphaeria turcica MIC = 2.40 µg/mL) activities. Their structure-activity relationship (SAR) was also preliminarily discussed in this study.


Asunto(s)
Antibacterianos/farmacología , Antifúngicos/farmacología , Platelmintos/microbiología , Actinobacteria/química , Actinobacteria/genética , Animales , Benzoquinonas/metabolismo , Sedimentos Geológicos/microbiología , Células HeLa , Humanos , Lactamas Macrocíclicas/metabolismo , Biología Marina , Staphylococcus aureus Resistente a Meticilina/efectos de los fármacos , Pruebas de Sensibilidad Microbiana , Streptomyces/química , Relación Estructura-Actividad
15.
Bioorg Med Chem Lett ; 26(6): 1599-1604, 2016 Mar 15.
Artículo en Inglés | MEDLINE | ID: mdl-26874404

RESUMEN

One new macrolactam derivative, nivelactam (1) and one new polyenoic acid derivative, niveamide (2), along with two other known 20-atom macrolactams (3 and 4) were isolated from the fermentation broth of Streptomyces niveus, which obtained from the forest soil in northeastern China. The structures of 1 and 2 were elucidated on the basis of HRESIMS, IR, and NMR spectroscopic data analyses. Compound 1 was proposed as an intramolecular [4+6]-cycloaddition product of 3 by S. niveus, and displayed moderate cytotoxic activity against a panel of human tumor cell lines in vitro, with IC50 values ranging from 3.76 ± 0.58 to 15.02 ± 2.81 µM.


Asunto(s)
Reacción de Cicloadición , Lactamas Macrocíclicas/química , Lactamas Macrocíclicas/aislamiento & purificación , Streptomyces/química , Antineoplásicos/química , Antineoplásicos/aislamiento & purificación , Antineoplásicos/metabolismo , Antineoplásicos/farmacología , Línea Celular Tumoral , Proliferación Celular/efectos de los fármacos , Relación Dosis-Respuesta a Droga , Ensayos de Selección de Medicamentos Antitumorales , Humanos , Lactamas Macrocíclicas/metabolismo , Lactamas Macrocíclicas/farmacología , Estructura Molecular , Streptomyces/metabolismo , Relación Estructura-Actividad
16.
Chembiochem ; 16(14): 2086-93, 2015 Sep 21.
Artículo en Inglés | MEDLINE | ID: mdl-26194087

RESUMEN

Heronamides belong to a growing family of ß-amino acid polyketide macrolactams (ßPMs) with an unsaturated side chain. The biosynthetic gene cluster for heronamide F was identified from the deep-sea-derived Streptomyces sp. SCSIO 03032. The involvement of the gene cluster in heronamide biosynthesis was confirmed by the functional characterization of the P450 enzyme HerO as an 8-hydroxylase for tailoring heronamide biosynthesis. The presence of migrated double bonds in the conjugated diene-containing side chain of heronamides was confirmed by feeding experiments with labeled small carboxylic acid molecules. This study is the first demonstration of migrated double bonds in ßPMs with an unsaturated side chain.


Asunto(s)
Lactamas Macrocíclicas/metabolismo , Oxigenasas de Función Mixta/metabolismo , Policétidos/metabolismo , Streptomyces/enzimología , Vías Biosintéticas , Hidroxilación , Lactamas Macrocíclicas/química , Oxigenasas de Función Mixta/genética , Familia de Multigenes , Policétidos/química , Streptomyces/química , Streptomyces/genética , Streptomyces/metabolismo
17.
J Am Chem Soc ; 136(14): 5209-12, 2014 Apr 09.
Artículo en Inglés | MEDLINE | ID: mdl-24670227

RESUMEN

Polyene macrolactams are a class of microbial metabolites, many of which show potent biological activities with unidentified modes of action. Here we report that 8-deoxyheronamide C, a new 20-membered polyene macrolactam from a marine-derived actinomycete Streptomyces sp., is a unique membrane binder. 8-Deoxyheronamide C showed a characteristic sensitivity profile against fission yeast sterol mutant cells, indicating that the metabolite targets cell membranes. We detected tight physical interaction between heronamides including 8-deoxyheronamide C and heronamide C and saturated hydrocarbon chains in lipid membranes using surface plasmon resonance experiments. We further show that heronamides induced abnormal cell wall morphology in fission yeast probably by perturbing the structure of membrane microdomains. This work will accelerate the biological and medical investigation of polyene macrolactams.


Asunto(s)
Hidrocarburos/metabolismo , Lactamas Macrocíclicas/farmacología , Lípidos de la Membrana/química , Schizosaccharomyces/efectos de los fármacos , Streptomyces/química , Proliferación Celular/efectos de los fármacos , Relación Dosis-Respuesta a Droga , Hidrocarburos/química , Lactamas Macrocíclicas/química , Lactamas Macrocíclicas/metabolismo , Lípidos de la Membrana/metabolismo , Conformación Molecular , Estructura Molecular , Schizosaccharomyces/citología , Streptomyces/metabolismo , Relación Estructura-Actividad
18.
Chembiochem ; 15(1): 94-102, 2014 Jan 03.
Artículo en Inglés | MEDLINE | ID: mdl-24501776

RESUMEN

Hygrocins are naphthoquinone ansamycins with significant antitumor activities. Here, we report the identification and characterization of the hygrocin biosynthetic gene cluster (hgc) in Streptomyces sp. LZ35. A biosynthetic pathway is proposed based on bioinformatics analysis of the hgc genes and intermediates accumulated in selected gene disruption mutants. One of the steps during the biosynthesis of hygrocins is a Baeyer­Villiger oxidation between C5 and C6, catalyzed by luciferase- like monooxygenase homologue Hgc3. Hgc3 represents the founding member of a previously uncharacterized family of enzymes acting as Baeyer­Villiger monooxygenases.


Asunto(s)
Antineoplásicos/metabolismo , Lactamas Macrocíclicas/metabolismo , Streptomyces/genética , Antineoplásicos/química , Proteínas Bacterianas/metabolismo , Lactamas Macrocíclicas/química , Oxigenasas de Función Mixta/genética , Oxigenasas de Función Mixta/metabolismo , Familia de Multigenes , Naftoquinonas/química , Naftoquinonas/metabolismo , Oxidación-Reducción , Filogenia , Streptomyces/enzimología
19.
J Virol ; 87(18): 10126-38, 2013 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-23843639

RESUMEN

All eight human herpesviruses have a conserved herpesvirus protein kinase (CHPK) that is important for the lytic phase of the viral life cycle. In this study, we show that heat shock protein 90 (Hsp90) interacts directly with each of the eight CHPKs, and we demonstrate that an Hsp90 inhibitor drug, 17-dimethylaminoethylamino-17-demethoxygeldanamycin (17-DMAG), decreases expression of all eight CHPKs in transfected HeLa cells. 17-DMAG also decreases expression the of the endogenous Epstein-Barr virus protein kinase (EBV PK, encoded by the BGLF4 gene) in lytically infected EBV-positive cells and inhibits phosphorylation of several different known EBV PK target proteins. Furthermore, 17-DMAG treatment abrogates expression of the human cytomegalovirus (HCMV) kinase UL97 in HCMV-infected human fibroblasts. Importantly, 17-DMAG treatment decreased the EBV titer approximately 100-fold in lytically infected AGS-Akata cells without causing significant cellular toxicity during the same time frame. Increased EBV PK expression in 17-DMAG-treated AGS-Akata cells did not restore EBV titers, suggesting that 17-DMAG simultaneously targets multiple viral and/or cellular proteins required for efficient viral replication. These results suggest that Hsp90 inhibitors, including 17-DMAG, may be a promising group of drugs that could have profound antiviral effects on herpesviruses.


Asunto(s)
Antivirales/metabolismo , Benzoquinonas/metabolismo , Inhibidores Enzimáticos/metabolismo , Proteínas HSP90 de Choque Térmico/antagonistas & inhibidores , Herpesvirus Humano 4/fisiología , Lactamas Macrocíclicas/metabolismo , Proteínas Quinasas/metabolismo , Replicación Viral/efectos de los fármacos , Línea Celular , Células Epiteliales/efectos de los fármacos , Células Epiteliales/virología , Fibroblastos/efectos de los fármacos , Fibroblastos/virología , Herpesvirus Humano 4/efectos de los fármacos , Humanos , Mapeo de Interacción de Proteínas , Carga Viral , Cultivo de Virus
20.
Virol J ; 11: 17, 2014 Feb 03.
Artículo en Inglés | MEDLINE | ID: mdl-24490822

RESUMEN

BACKGROUND: Porcine reproductive and respiratory syndrome virus (PRRSV) infection leads to substantial economic losses to the swine industry worldwide. However, no effective countermeasures exist to combat this virus infection so far. The most common antiviral strategy relies on directly inhibiting viral proteins. However, this strategy invariably leads to the emergence of drug resistance due to the error-prone nature of viral ploymerase. Targeting cellular proteins required for viral infection for developing new generation of antivirals is gaining concern. Recently, heat shock protein 90 (HSP90) was found to be an important host factor for the replication of multiple viruses and the inhibition of HSP90 showed significant antiviral effects. It is thought that the inhibition of HSP90 could be a promising broad-range antiviral approach. However, the effects of HSP90 inhibition on PRRSV infection have not been evaluated. In the current research, we tried to inhibit HSP90 and test whether the inhibition affect PRRSV infection. METHODS: We inhibit the function of HSP90 with two inhibitors, geldanamycin (GA) and 17- allylamono-demethoxygeldanamycin (17-AAG), and down-regulated the expression of endogenous HSP90 with specific small-interfering RNAs (siRNAs). Cell viability was measured with alamarBlue. The protein level of viral N was determined by western blotting and indirect immunofluorescence (IFA). Besides, IFA was employed to examine the level of viral double-stranded RNA (dsRNA). The viral RNA copy number and the level of IFN-ß mRNA were determined by quantitative real-time PCR (qRT-PCR). RESULTS: Our results indicated that both HSP90 inhibitors showed strong anti-PRRSV activity. They could reduce viral production by preventing the viral RNA synthesis. These inhibitory effects were not due to the activation of innate interferon response. In addition, we observed that individual knockdown targeting HSP90α or HSP90ß did not show dramatic inhibitory effect. Combined knockdown of these two isoforms was required to reduce viral infection. CONCLUSIONS: Our results shed light on the possibility of developing potential therapeutics targeting HSP90 against PRRSV infection.


Asunto(s)
Proteínas HSP90 de Choque Térmico/metabolismo , Interacciones Huésped-Patógeno , Virus del Síndrome Respiratorio y Reproductivo Porcino/fisiología , Replicación Viral , Animales , Benzoquinonas/metabolismo , Western Blotting , Línea Celular , Supervivencia Celular/efectos de los fármacos , Técnica del Anticuerpo Fluorescente Indirecta , Técnicas de Silenciamiento del Gen , Proteínas HSP90 de Choque Térmico/antagonistas & inhibidores , Lactamas Macrocíclicas/metabolismo , ARN Viral/análisis , Reacción en Cadena en Tiempo Real de la Polimerasa , Porcinos , Proteínas Virales/análisis
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