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1.
Org Biomol Chem ; 22(29): 6004-6015, 2024 07 24.
Artículo en Inglés | MEDLINE | ID: mdl-38993172

RESUMEN

Glycosyltransferases are nature's key biocatalysts for the formation of glycosidic bonds. Discovery and characterization of new synthetically useful glycosyltransferases are critical for the development of efficient enzymatic and chemoenzymatic strategies for producing complex carbohydrates and glycoconjugates. Herein we report the identification of Pasteurella multocida PmNatB as a bifunctional single-catalytic-domain glycosyltransferase with both ß1-3-galactosyltransferase and ß1-3-N-acetylgalactosaminyltransferase activities. It is a novel glycosyltransferase for constructing structurally diverse GalNAcß3Galα/ßOR and Galß3GalNAcα/ßOR disaccharides in one-pot multienzyme systems with in situ generation of UDP-sugars.


Asunto(s)
Disacáridos , N-Acetilgalactosaminiltransferasas , Pasteurella multocida , Pasteurella multocida/enzimología , Disacáridos/química , Disacáridos/síntesis química , Disacáridos/biosíntesis , N-Acetilgalactosaminiltransferasas/metabolismo , N-Acetilgalactosaminiltransferasas/química , Galactosiltransferasas/metabolismo
2.
Glycobiology ; 31(11): 1435-1443, 2021 12 18.
Artículo en Inglés | MEDLINE | ID: mdl-34280262

RESUMEN

Glycosaminoglycans (GAGs), such as hyaluronan (HA) and heparan sulfate (HS), are a large group of polysaccharides found in the extracellular matrix and on the cell surface. The turnover of these molecules is controlled by de novo synthesis and catabolism through specific endoglycosidases, which are the keys to our understanding of the homeostasis of GAGs and could hold opportunities for therapeutic intervention. Herein, we describe assays for endoglycosidases using nonreducing end fluorophore-labeled GAGs, in which GAGs were labeled via incorporation of GlcNAz by specific synthases and cycloaddition of alkyne fluorophores and then digested with corresponding endoglycosidases. Assays of various HA-specific hyaluronidases (HYALs), including PH-20 or SPAM1, and HS-specific heparanase (HPSE) are presented. We demonstrated the distinctive pH profiles, substrate specificities and specific activities of these enzymes and provided evidence that both HYAL3 and HYAL4 are authentic hyaluronidases. In addition, while all HYALs are active on high-molecular-weight HA, they are active on low-molecular-weight HA. Subsequently, we defined a new way of measuring the activities of HYALs. Our results indicate that the activities of HYALs must be under strict pH regulation. Our quantitative methods of measuring the activity GAG endoglycosidases could bring the opportunity of designing novel therapeutics by targeting these important enzymes.


Asunto(s)
Glucuronidasa/metabolismo , Proteoglicanos de Heparán Sulfato/metabolismo , Ácido Hialurónico/metabolismo , Hialuronoglucosaminidasa/metabolismo , Imagen Óptica , Electroforesis en Gel de Poliacrilamida , Concentración de Iones de Hidrógeno , Pasteurella multocida/enzimología , Proteínas Recombinantes/metabolismo , Streptococcus agalactiae/enzimología , Especificidad por Sustrato
3.
Microb Pathog ; 159: 105145, 2021 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-34411653

RESUMEN

Pasteurella multocida (P. multocida) is a Gram-negative bacterium which causes diseases in poultry, livestock, and humans, resulting in huge economic losses. P. multocida serovar A CQ6 (PmCQ6) is a naturally occurring attenuated strain with a thin capsule. Thus, we aimed to explore why this strain is less virulent and produces less capsule compared with P. multocida serovar A strain CQ2 (PmCQ2). Analysis of capsular polysaccharide synthesis genes in PmCQ6 revealed that, compared with PmCQ2, there was only a single point mutation in the initiation codon sequence of the hyaC gene. To test whether this point mutation caused capsular deficiency and reduced virulence, we rescued this hyaC mutation and observed a restoration of capsule production and higher virulence. Transcriptome analysis showed that the hyaC point mutation led to a downregulation of capsule synthesis and/or iron utilization related-genes. Taken together, the results indicate that the start codon mutation of hyaC is an important factor affecting the capsule synthesis and virulence of PmCQ6.


Asunto(s)
Infecciones por Pasteurella , Pasteurella multocida , Uridina Difosfato Glucosa Deshidrogenasa/genética , Humanos , Infecciones por Pasteurella/veterinaria , Pasteurella multocida/enzimología , Pasteurella multocida/genética , Mutación Puntual , Serogrupo , Virulencia/genética
4.
BMC Microbiol ; 20(1): 369, 2020 12 03.
Artículo en Inglés | MEDLINE | ID: mdl-33272193

RESUMEN

BACKGROUND: Pasteurella multocida is responsible for a highly infectious and contagious disease in birds, leading to heavy economic losses in the chicken industry. However, the pathogenesis of this disease is poorly understood. We recently identified an aspartate ammonia-lyase (aspA) in P. multocida that was significantly upregulated under iron-restricted conditions, the protein of which could effectively protect chicken flocks against P. multocida. However, the functions of this gene remain unclear. In the present study, we constructed aspA mutant strain △aspA::kan and complementary strain C△aspA::kan to investigate the function of aspA in detail. RESULT: Deletion of the aspA gene in P. multocida resulted in a significant reduction in bacterial growth in LB (Luria-Bertani) and MH (Mueller-Hinton) media, which was rescued by supplementation with 20 mM fumarate. The mutant strain △aspA::kan showed significantly growth defects in anaerobic conditions and acid medium, compared with the wild-type strain. Moreover, growth of △aspA::kan was more seriously impaired than that of the wild-type strain under iron-restricted conditions, and this growth recovered after supplementation with iron ions. AspA transcription was negatively regulated by iron conditions, as demonstrated by quantitative reverse transcription-polymerase chain reaction. Although competitive index assay showed the wild-type strain outcompetes the aspA mutant strain and △aspA::kan was significantly more efficient at producing biofilms than the wild-type strain, there was no significant difference in virulence between the mutant and the wild-type strains. CONCLUSION: These results demonstrate that aspA is required for bacterial growth in complex medium, and under anaerobic, acid, and iron-limited conditions.


Asunto(s)
Aspartato Amoníaco-Liasa/metabolismo , Proteínas Bacterianas/metabolismo , Pasteurella multocida/enzimología , Ácidos/metabolismo , Anaerobiosis , Animales , Aspartato Amoníaco-Liasa/genética , Proteínas Bacterianas/genética , Biopelículas/crecimiento & desarrollo , Pollos , Fumaratos/metabolismo , Hierro/metabolismo , Mutación , Infecciones por Pasteurella/microbiología , Infecciones por Pasteurella/veterinaria , Pasteurella multocida/crecimiento & desarrollo
5.
Microb Cell Fact ; 18(1): 132, 2019 Aug 12.
Artículo en Inglés | MEDLINE | ID: mdl-31405374

RESUMEN

BACKGROUND: Heparosan is the unsulfated precursor of heparin and heparan sulfate and its synthesis is typically the first step in the production of bioengineered heparin. In addition to its utility as the starting material for this important anticoagulant and anti-inflammatory drug, heparosan is a versatile compound that possesses suitable chemical and physical properties for making a variety of high-quality tissue engineering biomaterials, gels and scaffolds, as well as serving as a drug delivery vehicle. The selected production host was the Gram-positive bacterium Bacillus megaterium, which represents an increasingly used choice for high-yield production of intra- and extracellular biomolecules for scientific and industrial applications. RESULTS: We have engineered the metabolism of B. megaterium to produce heparosan, using a T7 RNA polymerase (T7 RNAP) expression system. This system, which allows tightly regulated and efficient induction of genes of interest, has been co-opted for control of Pasteurella multocida heparosan synthase (PmHS2). Specifically, we show that B. megaterium MS941 cells co-transformed with pT7-RNAP and pPT7_PmHS2 plasmids are capable of producing heparosan upon induction with xylose, providing an alternate, safe source of heparosan. Productivities of ~ 250 mg/L of heparosan in shake flasks and ~ 2.74 g/L in fed-batch cultivation were reached. The polydisperse Pasteurella heparosan synthase products from B. megaterium primarily consisted of a relatively high molecular weight (MW) heparosan (~ 200-300 kD) that may be appropriate for producing certain biomaterials; while the less abundant lower MW heparosan fractions (~ 10-40 kD) can be a suitable starting material for heparin synthesis. CONCLUSION: We have successfully engineered an asporogenic and non-pathogenic B. megaterium host strain to produce heparosan for various applications, through a combination of genetic manipulation and growth optimization strategies. The heparosan products from B. megaterium display a different range of MW products than traditional E. coli K5 products, diversifying its potential applications and facilitating increased product utility.


Asunto(s)
Bacillus megaterium/genética , Bacillus megaterium/metabolismo , Disacáridos/biosíntesis , Glicosiltransferasas/metabolismo , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Vías Biosintéticas , ARN Polimerasas Dirigidas por ADN/genética , Ingeniería Genética , Glicosiltransferasas/genética , Ingeniería Metabólica , Pasteurella multocida/enzimología , Proteínas Virales/genética
6.
J Org Chem ; 84(11): 6697-6708, 2019 06 07.
Artículo en Inglés | MEDLINE | ID: mdl-31083938

RESUMEN

A library of 2(a),3(a/e)-difluorosialic acids and their C-5 and/or C-9 derivatives were chemoenzymatically synthesized. Pasteurella multocida sialic acid aldolase (PmAldolase), but not its Escherichia coli homologue (EcAldolase), was found to catalyze the formation of C5-azido analogue of 3-fluoro(a)-sialic acid. In comparison, both PmAldolase and EcAldolase could catalyze the synthesis of 3-fluoro(a/e)-sialic acids and their C-9 analogues although PmAldolase was generally more efficient. The chemoenzymatically synthesized 3-fluoro(a/e)-sialic acid analogues were purified and chemically derivatized to form the desired difluorosialic acids and derivatives. Inhibition studies against several bacterial sialidases and a recombinant human cytosolic sialidase hNEU2 indicated that sialidase inhibition was affected by the C-3 fluorine stereochemistry and derivatization at C-5 and/or C-9 of the inhibitor. Opposite to that observed for influenza A virus sialidases and hNEU2, compounds with axial fluorine at C-3 were better inhibitors (up to 100-fold) against bacterial sialidases compared to their 3F-equatorial counterparts. While C-5-modified compounds were less-efficient antibacterial sialidase inhibitors, 9-N3-modified 2,3-difluoro-Neu5Ac showed increased inhibitory activity against bacterial sialidases. 9-Azido-9-deoxy-2-(e)-3-(a)-difluoro- N-acetylneuraminic acid [2(e)3(a)DFNeu5Ac9N3] was identified as an effective inhibitor with a long effective duration selectively against pathogenic bacterial sialidases from Clostridium perfringens (CpNanI) and Vibrio cholerae.


Asunto(s)
Inhibidores Enzimáticos/farmacología , Neuraminidasa/antagonistas & inhibidores , Pasteurella multocida/enzimología , Ácidos Siálicos/farmacología , Conformación de Carbohidratos , Inhibidores Enzimáticos/síntesis química , Inhibidores Enzimáticos/química , Neuraminidasa/metabolismo , Ácidos Siálicos/síntesis química , Ácidos Siálicos/química
7.
Int J Mol Sci ; 20(22)2019 Nov 12.
Artículo en Inglés | MEDLINE | ID: mdl-31726754

RESUMEN

In the last decades, interest in medical or cosmetic applications of hyaluronic acid (HA) has increased. Size and dispersity are key characteristics of biological function. In contrast to extraction from animal tissue or bacterial fermentation, enzymatic in vitro synthesis is the choice to produce defined HA. Here we present a one-pot enzyme cascade with six enzymes for the synthesis of HA from the cheap monosaccharides glucuronic acid (GlcA) and N-acetylglucosamine (GlcNAc). The combination of two enzyme modules, providing the precursors UDP-GlcA and UDP-GlcNAc, respectively, with hyaluronan synthase from Pasteurella multocida (PmHAS), was optimized to meet the kinetic requirements of PmHAS for high HA productivity and molecular weight. The Mg2+ concentration and the pH value were found as key factors. The HA product can be tailored by different conditions: 25 mM Mg2+ and 2-[4-(2-hydroxyethyl)piperazin-1-yl]ethanesulfonic acid (HEPES)-NaOH pH 8 result into an HA product with high Mw HA (1.55 MDa) and low dispersity (1.05). Whereas with 15 mM Mg2+ and HEPES-NaOH pH 8.5, we reached the highest HA concentration (2.7 g/L) with a yield of 86.3%. Our comprehensive data set lays the basis for larger scale enzymatic HA synthesis.


Asunto(s)
Proteínas de Arabidopsis/química , Arabidopsis/enzimología , Proteínas Bacterianas/química , Hialuronano Sintasas/química , Ácido Hialurónico/biosíntesis , Pasteurella multocida/enzimología , Cinética , Uridina Difosfato Ácido Glucurónico/química
8.
Chembiochem ; 19(13): 1414-1423, 2018 07 04.
Artículo en Inglés | MEDLINE | ID: mdl-29603528

RESUMEN

Hyaluronic acid (HA), with diverse cosmetic and medical applications, is the natural glycosaminoglycan product of HA synthases. Although process and/or metabolic engineering are used for industrial HA production, the potential of protein engineering has barely been realised. Herein, knowledge-gaining directed evolution (KnowVolution) was employed to generate an HA synthase variant from Pasteurella multocida (pmHAS) with improved chain-length specificity and a twofold increase in mass-based turnover number. Seven improved pmHAS variants out of 1392 generated by error-prone PCR were identified; eight prospective positions were saturated and the most beneficial amino acid substitutions were recombined. After one round of KnowVolution, the longest HA polymer (<4.7 MDa), through an engineered pmHAS variant in a cell-free system, was synthesised. Computational studies showed that substitutions from the best variant (T40L, V59M and T104A) are distant from the glycosyltransferase sites and increase the flexibility of the N-terminal region of pmHAS. Taken together, these findings suggest that the N terminus may be involved in HA synthesis and demonstrate the potential of protein engineering towards improved HA synthase activity.


Asunto(s)
Proteínas Bacterianas/metabolismo , Hialuronano Sintasas/metabolismo , Ácido Hialurónico/biosíntesis , Pasteurella multocida/enzimología , Sustitución de Aminoácidos , Proteínas Bacterianas/química , Proteínas Bacterianas/genética , Evolución Molecular Dirigida/métodos , Hialuronano Sintasas/química , Hialuronano Sintasas/genética , Ácido Hialurónico/química , Simulación de Dinámica Molecular , Peso Molecular , Reacción en Cadena de la Polimerasa/métodos , Dominios Proteicos/efectos de los fármacos
9.
Org Biomol Chem ; 15(7): 1700-1709, 2017 Feb 21.
Artículo en Inglés | MEDLINE | ID: mdl-28134951

RESUMEN

A microtiter plate-based screening assay capable of determining the activity and regioselectivity of sialyltransferases was developed. This assay was used to screen two single-site saturation libraries of Pasteurella multocidaα2-3-sialyltransferase 1 (PmST1) for α2-6-sialyltransferase activity and total sialyltransferase activity. PmST1 double mutant P34H/M144L was found to be the most effective α2-6-sialyltransferase and displayed 50% reduced donor hydrolysis and 50-fold reduced sialidase activity compared to the wild-type PmST1. It retained the donor substrate promiscuity of the wild-type enzyme and was used in an efficient one-pot multienzyme (OPME) system to selectively catalyze the sialylation of the terminal galactose residue in a multigalactose-containing tetrasaccharide lacto-N-neotetraoside.


Asunto(s)
Colorimetría , Pasteurella multocida/enzimología , Sialiltransferasas/química , Sialiltransferasas/genética , Mutagénesis , Sialiltransferasas/metabolismo , Estereoisomerismo , beta-D-Galactósido alfa 2-6-Sialiltransferasa , beta-Galactosida alfa-2,3-Sialiltransferasa
10.
Bioorg Med Chem ; 25(12): 3182-3194, 2017 06 15.
Artículo en Inglés | MEDLINE | ID: mdl-28462843

RESUMEN

Non-substrate-like inhibitors of glycosyltransferases are sought after as chemical tools and potential lead compounds for medicinal chemistry, chemical biology and drug discovery. Here, we describe the discovery of a novel small molecular inhibitor chemotype for LgtC, a retaining α-1,4-galactosyltransferase involved in bacterial lipooligosaccharide biosynthesis. The new inhibitors, which are structurally unrelated to both the donor and acceptor of LgtC, have low micromolar inhibitory activity, comparable to the best substrate-based inhibitors. We provide experimental evidence that these inhibitors react covalently with LgtC. Results from detailed enzymological experiments with wild-type and mutant LgtC suggest the non-catalytic active site residue Cys246 as a likely target residue for these inhibitors. Analysis of available sequence and structural data reveals that non-catalytic cysteines are a common motif in the active site of many bacterial glycosyltransferases. Our results can therefore serve as a blueprint for the rational design of non-substrate-like, covalent inhibitors against a broad range of other bacterial glycosyltransferases.


Asunto(s)
Proteínas Bacterianas/antagonistas & inhibidores , Inhibidores Enzimáticos/química , Inhibidores Enzimáticos/farmacología , Glicosiltransferasas/antagonistas & inhibidores , Neisseria meningitidis/enzimología , Pasteurella multocida/enzimología , Animales , Proteínas Bacterianas/química , Proteínas Bacterianas/metabolismo , Dominio Catalítico/efectos de los fármacos , Bovinos , Descubrimiento de Drogas , Glicosiltransferasas/química , Glicosiltransferasas/metabolismo , Humanos , Meningitis Meningocócica/tratamiento farmacológico , Meningitis Meningocócica/microbiología , Simulación del Acoplamiento Molecular , Neisseria meningitidis/química , Infecciones por Pasteurella/tratamiento farmacológico , Infecciones por Pasteurella/microbiología , Pasteurella multocida/química
11.
Bioprocess Biosyst Eng ; 40(5): 675-681, 2017 May.
Artículo en Inglés | MEDLINE | ID: mdl-28120124

RESUMEN

Heparosan, the capsular polysaccharide discovered in many pathogenic bacteria, is a promising material for heparin preparation. In this study, the Pasteurella multocida heparosan synthase 1 (PmHS1) module was used to synthesize heparosan with controlled molecular weight, while tuaD/gtaB module or gcaD module was responsible for UDP-precursors production in Bacillus subtilis 168. After metabolic pathway optimization, the yield of heparosan was as high as 237.6 mg/L in strain containing PmHS1 module and tuaD/gtaB module, which indicated that these two modules were key factors in heparosan production. The molecular weight of heparosan varied from 39 to 53 kDa, which indicated that heparosan molecular weight could be adjusted by the amount of PmHS1 and the ratio of two UDP precursors. The results showed that it would be possible to produce safe heparosan with appropriate molecular weight which is useful in heparin production.


Asunto(s)
Bacillus subtilis , Proteínas Bacterianas , Glicosiltransferasas , Ingeniería Metabólica , Pasteurella multocida , Bacillus subtilis/genética , Bacillus subtilis/metabolismo , Proteínas Bacterianas/biosíntesis , Proteínas Bacterianas/genética , Glicosiltransferasas/biosíntesis , Glicosiltransferasas/genética , Pasteurella multocida/enzimología , Pasteurella multocida/genética
12.
Glycobiology ; 25(7): 767-73, 2015 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-25840968

RESUMEN

Legionaminic acids (Leg) are bacterial analogs of neuraminic acid, with the same stereochemistry but different substituents at C5, C7 and C9. Hence they may be incorporated into useful analogs of sialoglycoconjugates, and we previously reported two sialyltransferases that could utilize cytidine monophosphate (CMP)-Leg5Ac7Ac for preparation of Leg glycoconjugates, which were resistant to sialidases [Watson DC, Leclerc S, Wakarchuk WW, Young NM. 2011. Enzymatic synthesis and properties of glycoconjugates with legionaminic acid as a replacement for neuraminic acid. Glycobiology. 21:99-108.]. These were the porcine ST3Gal1 and Pasteurella multocida sialyltransferases. We now report two additional sialyltransferases with superior Leg-transferase properties to the previous two. These are (i) a truncated form of a Photobacterium α2,6-sialyltransferase with an Ala-Met mutation in its active site, and (ii) an α2,3-sialyltransferase from Neisseria meningitidis MC58 with a higher transferase activity than the P. multocida enzyme, with either CMP-Neu5Ac or CMP-Leg5Ac7Ac as the donor. These enzymes will enable the production of useful Leg5Ac7Ac glycoconjugate derivatives with either α2,6 or α2,3 linkages and unique biological properties.


Asunto(s)
Glicoconjugados/metabolismo , Ácido N-Acetilneuramínico/metabolismo , Ácidos Siálicos/metabolismo , Sialiltransferasas/metabolismo , Animales , Conformación de Carbohidratos , Glicoconjugados/química , Modelos Moleculares , Mutación , Pasteurella multocida/enzimología , Photobacterium/enzimología , Porcinos
13.
Appl Microbiol Biotechnol ; 98(3): 1127-34, 2014 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-23661084

RESUMEN

The biological activities of heparan sulfate (HS) and heparin (HP) are closely related to their molecular structures. Both Pasteurella multocida heparosan synthase 2 (PmHS2) and Escherichia coli K5 KfiA have been used for enzymatic and chemoenzymatic synthesis of HS and HP oligosaccharides and their derivatives. We show here that cloning using the pET15b vector and expressing PmHS2 as an N-His6-tagged fusion protein improve its expression level in E. coli. Investigation of the donor substrate specificity of the N-acetylglucosaminyltransferase activities of P. multocida heparosan synthase 2 (PmHS2) and E. coli K5 KfiA indicates the substrate promiscuities of PmHS2 and KfiA. Overall, both PmHS2 and KfiA can use uridine 5'-diphosphate-N-acetylglucosamine (UDP-GlcNAc) and some of its C2'- and C6'-derivatives as donor substrates for their α1-4-GlcNAcT activities. Nevertheless, PmHS2 has a broader tolerance towards substrate modifications. Other than the UDP-sugars that can be used by KfiA, additional C6'-derivatives of UDP-GlcNAc, UDP-glucose, and UDP-N-acetylgalactosamine (UDP-GalNAc) are tolerable substrates for the α1-4-GlcNAcT activity of PmHS2. The substrate promiscuities of PmHS2 and KfiA will allow efficient chemoenzymatic synthesis of diverse HS and HP oligosaccharide derivatives which may have improved or altered activities compared to their natural counterparts.


Asunto(s)
Proteínas de Escherichia coli/metabolismo , Escherichia coli/enzimología , Glicosiltransferasas/metabolismo , N-Acetilglucosaminiltransferasas/metabolismo , Pasteurella multocida/enzimología , Clonación Molecular , Escherichia coli/genética , Proteínas de Escherichia coli/genética , Expresión Génica , Glicosiltransferasas/genética , N-Acetilglucosaminiltransferasas/genética , Pasteurella multocida/genética , Especificidad por Sustrato
14.
Angew Chem Int Ed Engl ; 53(22): 5700-5, 2014 May 26.
Artículo en Inglés | MEDLINE | ID: mdl-24737687

RESUMEN

Oligosaccharides of the glycolipids and glycoproteins at the outer membranes of human cells carry terminal neuraminic acids, which are responsible for recognition events and adhesion of cells, bacteria, and virus particles. The synthesis of neuraminic acid containing glycosides is accomplished by intracellular sialyl transferases. Therefore, the chemical manipulation of cellular sialylation could be very important to interfere with cancer development, inflammations, and infections. The development and applications of the first nanomolar fluorescent inhibitors of sialyl transferases are described herein. The obtained carbohydrate-nucleotide mimetics were found to bind all four commercially available and tested eukaryotic and bacterial sialyl transferases in a fluorescence polarization assay. Moreover, it was observed that the anionic mimetics intruded rapidly and efficiently into cells in vesicles and translocated to cellular organelles surrounding the nucleus of CHO cells. The new compounds inhibit cellular sialylation in two cell lines and open new perspectives for investigations of cellular sialylation.


Asunto(s)
Citidina Monofosfato/análogos & derivados , Inhibidores Enzimáticos/metabolismo , Colorantes Fluorescentes/química , Ácidos Siálicos/química , Sialiltransferasas/metabolismo , Animales , Sitios de Unión , Células CHO , Permeabilidad de la Membrana Celular , Cricetinae , Cricetulus , Citidina Monofosfato/química , Citidina Monofosfato/metabolismo , Inhibidores Enzimáticos/química , Polarización de Fluorescencia , Colorantes Fluorescentes/metabolismo , Cinética , Simulación del Acoplamiento Molecular , Ácidos Neuramínicos/química , Ácidos Neuramínicos/metabolismo , Pasteurella multocida/enzimología , Photobacterium/enzimología , Unión Proteica , Estructura Terciaria de Proteína , Ácidos Siálicos/metabolismo , Sialiltransferasas/antagonistas & inhibidores , Especificidad por Sustrato
15.
Biochemistry ; 52(47): 8570-9, 2013 Nov 26.
Artículo en Inglés | MEDLINE | ID: mdl-24152047

RESUMEN

N-Acetylneuraminate lyases (NALs) or sialic acid aldolases catalyze the reversible aldol cleavage of N-acetylneuraminic acid (Neu5Ac, the most common form of sialic acid) to form pyruvate and N-acetyl-d-mannosamine. Although equilibrium favors sialic acid cleavage, these enzymes can be used for high-yield chemoenzymatic synthesis of structurally diverse sialic acids in the presence of excess pyruvate. Engineering these enzymes to synthesize structurally modified natural sialic acids and their non-natural derivatives holds promise in creating novel therapeutic agents. Atomic-resolution structures of these enzymes will greatly assist in guiding mutagenic and modeling studies to engineer enzymes with altered substrate specificity. We report here the crystal structures of wild-type Pasteurella multocida N-acetylneuraminate lyase and its K164A mutant. Like other bacterial lyases, it assembles into a homotetramer with each monomer folding into a classic (ß/α)8 TIM barrel. Two wild-type structures were determined, in the absence of substrates, and trapped in a Schiff base intermediate between Lys164 and pyruvate, respectively. Three structures of the K164A variant were determined: one in the absence of substrates and two binary complexes with N-acetylneuraminic acid (Neu5Ac) and N-glycolylneuraminic acid (Neu5Gc). Both sialic acids bind to the active site in the open-chain ketone form of the monosaccharide. The structures reveal that every hydroxyl group of the linear sugars makes hydrogen bond interactions with the enzyme, and the residues that determine specificity were identified. Additionally, the structures provide some clues for explaining the natural discrimination of sialic acid substrates between the P. multocida and Escherichia coli NALs.


Asunto(s)
Proteínas Bacterianas/metabolismo , Modelos Moleculares , Oxo-Ácido-Liasas/metabolismo , Pasteurella multocida/enzimología , Sustitución de Aminoácidos , Proteínas Bacterianas/química , Proteínas Bacterianas/genética , Proteínas Bacterianas/aislamiento & purificación , Biocatálisis , Dominio Catalítico , Hidrólisis , Conformación Molecular , Mutagénesis Sitio-Dirigida , Proteínas Mutantes/química , Proteínas Mutantes/aislamiento & purificación , Proteínas Mutantes/metabolismo , Ácido N-Acetilneuramínico/química , Ácido N-Acetilneuramínico/metabolismo , Ácidos Neuramínicos/química , Ácidos Neuramínicos/metabolismo , Oxo-Ácido-Liasas/química , Oxo-Ácido-Liasas/genética , Oxo-Ácido-Liasas/aislamiento & purificación , Multimerización de Proteína , Estructura Secundaria de Proteína , Subunidades de Proteína/química , Subunidades de Proteína/genética , Subunidades de Proteína/aislamiento & purificación , Subunidades de Proteína/metabolismo , Proteínas Recombinantes/química , Proteínas Recombinantes/aislamiento & purificación , Proteínas Recombinantes/metabolismo , Bases de Schiff , Especificidad por Sustrato
16.
J Biol Chem ; 287(34): 29054-61, 2012 Aug 17.
Artículo en Inglés | MEDLINE | ID: mdl-22773834

RESUMEN

Heparan sulfate (HS) and heparin are highly sulfated polysaccharides. Heparin is a commonly used anticoagulant drug that inhibits the activities of factors Xa and IIa (also known as thrombin) to prevent blood clot formation. Here, we report the synthesis of a series of size-defined oligosaccharides to probe the minimum size requirement for an oligosaccharide with anti-IIa activity. The synthesis was completed by a chemoenzymatic approach involving glycosyltransferases, HS sulfotransferases, and C(5)-epimerase. We demonstrate the ability to synthesize highly purified N-sulfo-oligosaccharides having up to 21 saccharide residues. The results from anti-Xa and anti-IIa activity measurements revealed that an oligosaccharide longer than 19 saccharide residues is necessary to display anti-IIa activity. The oligosaccharides also exhibit low binding toward platelet factor 4, raising the possibility of preparing a synthetic heparin with a reduced effect of heparin-induced thrombocytopenia. The results from this study demonstrate the ability to synthesize large HS oligosaccharides and provide a unique tool to probe the structure and function relationships of HS that require the use of large HS fragments.


Asunto(s)
Anticoagulantes/síntesis química , Proteínas Bacterianas/química , Inhibidores del Factor Xa , Glicosiltransferasas/química , Heparina/síntesis química , Oligosacáridos/síntesis química , Pasteurella multocida/enzimología , Protrombina/antagonistas & inhibidores , Anticoagulantes/química , Factor Xa/química , Heparina/farmacología , Humanos , Oligosacáridos/farmacología , Protrombina/química
17.
J Biol Chem ; 287(10): 7203-12, 2012 Mar 02.
Artículo en Inglés | MEDLINE | ID: mdl-22235128

RESUMEN

The Pasteurella multocida heparosan synthases, PmHS1 and PmHS2, are homologous (∼65% identical) bifunctional glycosyltransferase proteins found in Type D Pasteurella. These unique enzymes are able to generate the glycosaminoglycan heparosan by polymerizing sugars to form repeating disaccharide units from the donor molecules UDP-glucuronic acid (UDP-GlcUA) and UDP-N-acetylglucosamine (UDP-GlcNAc). Although these isozymes both generate heparosan, the catalytic phenotypes of these isozymes are quite different. Specifically, during in vitro synthesis, PmHS2 is better able to generate polysaccharide in the absence of exogenous acceptor (de novo synthesis) than PmHS1. Additionally, each of these enzymes is able to generate polysaccharide using unnatural sugar analogs in vitro, but they exhibit differences in the substitution patterns of the analogs they will employ. A series of chimeric enzymes has been generated consisting of various portions of both of the Pasteurella heparosan synthases in a single polypeptide chain. In vitro radiochemical sugar incorporation assays using these purified chimeric enzymes have shown that most of the constructs are enzymatically active, and some possess novel characteristics including the ability to produce nearly monodisperse polysaccharides with an expanded range of sugar analogs. Comparison of the kinetic properties and the sequences of the wild-type enzymes with the chimeric enzymes has enabled us to identify regions that may be responsible for some aspects of both donor binding specificity and acceptor usage. In combination with previous work, these approaches have enabled us to better understand the structure/function relationship of this unique family of glycosyltransferases.


Asunto(s)
Proteínas Bacterianas/química , Glicosiltransferasas/química , Pasteurella multocida/enzimología , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Glicosiltransferasas/genética , Glicosiltransferasas/metabolismo , Isoenzimas/química , Isoenzimas/genética , Isoenzimas/metabolismo , Pasteurella multocida/genética , Polisacáridos Bacterianos/biosíntesis , Polisacáridos Bacterianos/química , Polisacáridos Bacterianos/genética , Proteínas Recombinantes de Fusión/química , Proteínas Recombinantes de Fusión/genética , Proteínas Recombinantes de Fusión/metabolismo , Relación Estructura-Actividad , Uridina Difosfato Ácido Glucurónico/química , Uridina Difosfato Ácido Glucurónico/genética , Uridina Difosfato Ácido Glucurónico/metabolismo , Uridina Difosfato N-Acetilglucosamina/química , Uridina Difosfato N-Acetilglucosamina/genética , Uridina Difosfato N-Acetilglucosamina/metabolismo
18.
Glycobiology ; 23(3): 286-94, 2013 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-23118207

RESUMEN

Pasteurella multocida strains are classified into 16 Heddleston serovars on the basis of the lipopolysaccharide (LPS) antigens expressed on the surface of the bacteria. The LPS structure and the corresponding LPS outer core biosynthesis loci of strains belonging to serovars 1, 2, 3, 5, 9 and 14 have been characterized, revealing a clear structural basis for serovar classification. However, several of these serovars are genetically related, sharing the same LPS outer core biosynthesis locus, but producing different LPS molecules as a result of mutations within LPS assembly genes. In this article, we report that the P. multocida type strains belonging to serovars 8 and 13 share the same LPS outer core biosynthesis locus and produce structurally related LPS molecules. Structural analysis of the serovar 8 LPS revealed an inner core that is conserved among P. multocida strains and the following outer core structure: X-(1-6)-(1S)GalaNAC-(1-4-6)-α-Gal-(1-3)-ß-Gal(PEtn)-(1-4)-L,D-α-Hep-(1-6) where X is a unique phospho-glycero moiety, 1-((4-aminobutyl)amino)-3-hydroxy-1-oxopropan-2-yl hydrogen phosphate, attached to the sixth position of (1S)GalaNAc. For serovar 13, the LPS structure is the same except for the absence of the terminal phospho-glycero moiety. Analysis of the common outer core biosynthesis locus from the serovar 8 and 13 type strains identified three genes that we predict are involved in the biosynthesis of this terminal moiety. Furthermore, bioinformatic comparisons with the characterized LPS outer core glycosyltransferases from Actinobacillus pleuropneumoniae serovar 1, strain 4074, allowed us to assign a function for each of the glycosyltransferases encoded within the serovar 8/13 LPS outer core biosynthesis locus.


Asunto(s)
Lipopolisacáridos/química , Pasteurella multocida/química , Actinobacillus pleuropneumoniae/enzimología , Actinobacillus pleuropneumoniae/genética , Conformación de Carbohidratos , Secuencia de Carbohidratos , Genes Bacterianos , Sitios Genéticos , Glicosiltransferasas/genética , Lipopolisacáridos/biosíntesis , Pasteurella multocida/enzimología , Pasteurella multocida/genética
19.
Org Biomol Chem ; 11(5): 842-8, 2013 Feb 07.
Artículo en Inglés | MEDLINE | ID: mdl-23241945

RESUMEN

Fluorinated Thomsen-Friedenreich (T) antigens were synthesized efficiently from chemically produced fluorinated monosaccharides using a highly efficient one-pot two-enzyme chemoenzymatic approach containing a galactokinase and a D-galactosyl-ß1-3-N-acetyl-D-hexosamine phosphorylase. These fluorinated T-antigens were further sialylated to form fluorinated ST-antigens using a one-pot two-enzyme system containing a CMP-sialic acid synthetase and an α-2-3-sialyltransferase.


Asunto(s)
Antígenos de Carbohidratos Asociados a Tumores/química , Antígenos de Carbohidratos Asociados a Tumores/metabolismo , Mucinas/química , Mucinas/metabolismo , Antígenos Virales de Tumores/metabolismo , Secuencia de Carbohidratos , Halogenación , Humanos , Datos de Secuencia Molecular , N-Acilneuraminato Citidililtransferasa/metabolismo , Neisseria meningitidis/enzimología , Pasteurella multocida/enzimología , Sialiltransferasas/metabolismo , beta-Galactosida alfa-2,3-Sialiltransferasa
20.
Bioorg Med Chem ; 21(16): 4778-85, 2013 Aug 15.
Artículo en Inglés | MEDLINE | ID: mdl-23535562

RESUMEN

A series of STn-MUC1 and ST-MUC1 glycopeptides containing naturally occurring and non-natural sialic acids have been chemoenzymatically synthesized from Tn-MUC1 glycopeptide using one-pot multienzyme (OPME) approaches. In situ generation of the sialyltransferase donor cytidine 5'-monophosphate-sialic acid (CMP-Sia) using a CMP-sialic acid synthetase in the presence of an extra amount of cytidine 5'-triphosphate (CTP) and removal of CMP from the reaction mixture by flash C18 cartridge purification allow the complete consumption of Tn-MUC1 glycopeptide for quantitative synthesis of STn-MUC1. A Campylobacter jejuni ß1-3GalT (CjCgtBΔ30-His6) mutant has been found to catalyze the transfer of one or more galactose residues to Tn-MUC1 for the synthesis of T-MUC1 and galactosylated T-MUC1. Sialylation of T-MUC1 using Pasteurella multocida α2-3-sialyltransferase 3 (PmST3) with Neisseria meningitidis CMP-sialic acid synthetase (NmCSS) and Escherichia coli sialic acid aldolase in one pot produced ST-MUC1 efficiently. These glycopeptides are potential cancer vaccine candidates.


Asunto(s)
Proteínas Bacterianas/metabolismo , Glicopéptidos/biosíntesis , Ácidos Siálicos/química , Antígenos Virales de Tumores/química , Proteínas Bacterianas/genética , Secuencia de Bases , Campylobacter jejuni/enzimología , Clonación Molecular , Escherichia coli/enzimología , Glicopéptidos/química , Datos de Secuencia Molecular , Mutación , Neisseria meningitidis/enzimología , Oxo-Ácido-Liasas/genética , Oxo-Ácido-Liasas/metabolismo , Pasteurella multocida/enzimología , Proteínas Recombinantes de Fusión/biosíntesis , Proteínas Recombinantes de Fusión/genética , Sialiltransferasas/genética , Sialiltransferasas/metabolismo
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