RESUMEN
The fall armyworm (Spodoptera frugiperda) was found to have invaded China in December 2018, and in just one year, crops in 26 provinces were heavily affected. Currently, the most effective method for emergency control of fulminant pests is to use of chemical pesticides. Recently, most fall armyworm populations in China were begining to exhibite low level resistance to chlorantraniliprole. At present, it is not possible to sensitively reflect the low level resistance of S. frugiperda by detecting target mutation and detoxification enzyme activity. In this study we found that 12 successive generations of screening with chlorantraniliprole caused S. frugiperda to develop low level resistance to this insecticide, and this phenotype was not attribute to genetic mutations in S. frugiperda, but rather to a marked increase in the relative amount of the symbiotic bacteria Sphingomonas. Using FISH and qPCR assays, we determined the amount of Sphingomonas in the gut of S. frugiperda and found Sphingomonas accumulation to be highest in the 3rd-instar larvae. Additionally, Sphingomonas was observed to provide a protective effect to against chlorantraniliprole stress to S. frugiperda. With the increase of the resistance to chlorantraniliprole, the abundance of bacteria also increased, we propose Sphingomonas monitoring could be adapted into an early warning index for the development of chlorantraniliprole resistance in S. frugiperda populations, such that timely measures can be taken to delay or prevent the widespread propagation of resistance to this highly useful agricultural chemical in S. frugiperda field populations.
Asunto(s)
Insecticidas , Larva , Sphingomonas , Spodoptera , ortoaminobenzoatos , Animales , Spodoptera/efectos de los fármacos , Spodoptera/microbiología , ortoaminobenzoatos/farmacología , Insecticidas/farmacología , Insecticidas/toxicidad , Larva/efectos de los fármacos , Sphingomonas/efectos de los fármacos , Sphingomonas/genética , Resistencia a los Insecticidas/genéticaRESUMEN
BACKGROUND: Plumbing systems are an infrequent but known reservoir for opportunistic microbial pathogens that can infect hospitalized patients. In 2016, a cluster of clinical sphingomonas infections prompted an investigation. METHODS: We performed whole-genome DNA sequencing on clinical isolates of multidrug-resistant Sphingomonas koreensis identified from 2006 through 2016 at the National Institutes of Health (NIH) Clinical Center. We cultured S. koreensis from the sinks in patient rooms and performed both whole-genome and shotgun metagenomic sequencing to identify a reservoir within the infrastructure of the hospital. These isolates were compared with clinical and environmental S. koreensis isolates obtained from other institutions. RESULTS: The investigation showed that two isolates of S. koreensis obtained from the six patients identified in the 2016 cluster were unrelated, but four isolates shared more than 99.92% genetic similarity and were resistant to multiple antibiotic agents. Retrospective analysis of banked clinical isolates of sphingomonas from the NIH Clinical Center revealed the intermittent recovery of a clonal strain over the past decade. Unique single-nucleotide variants identified in strains of S. koreensis elucidated the existence of a reservoir in the hospital plumbing. Clinical S. koreensis isolates from other facilities were genetically distinct from the NIH isolates. Hospital remediation strategies were guided by results of microbiologic culturing and fine-scale genomic analyses. CONCLUSIONS: This genomic and epidemiologic investigation suggests that S. koreensis is an opportunistic human pathogen that both persisted in the NIH Clinical Center infrastructure across time and space and caused health care-associated infections. (Funded by the NIH Intramural Research Programs.).
Asunto(s)
Infección Hospitalaria/microbiología , Reservorios de Enfermedades/microbiología , Infecciones por Bacterias Gramnegativas/microbiología , Ingeniería Sanitaria , Sphingomonas/genética , Antibacterianos/farmacología , Hospitales Federales , Humanos , Metagenómica , Pruebas de Sensibilidad Microbiana , National Institutes of Health (U.S.) , Estudios Retrospectivos , Sphingomonas/efectos de los fármacos , Sphingomonas/aislamiento & purificación , Estados Unidos , Abastecimiento de Agua , Secuenciación Completa del GenomaRESUMEN
Immobilized cells (ICs) have been widely used to enhance the remediation of organic-contaminated soil (e.g., polycyclic aromatic hydrocarbons, PAHs). Once ICs are added to the heterogeneous soil, degradation hotspots are immediately formed near the carrier, leaving the remaining soil lack of degrading bacteria. Therefore, it remains unclear how ICs efficiently utilize PAHs in soil. In this study, the viability of Silica-IC (Cells@Sawdust@Silica) and the distribution of inoculated ICs and phenanthrene (Phe) in a slurry system (soil to water ratio 1:2) were investigated to explore the removal mechanism of PAHs by the ICs. Results showed that the Silica-IC maintained (i) good reproductive ability (displayed by the growth curve in soil and water phase), (ii) excellent stability, which was identified by the ratio of colony forming units in the soil phase to the water phase, the difference between the colony number and the DNA copies, and characteristics of the biomaterial observed by the FESEM, and (iii) high metabolic activity (the removal percentages of Phe in soil by the ICs were more than 95% after 48 h). Finally, the possible pathways for the ICs to efficiently utilize Phe in soil are proposed based on the distribution and correlation of Phe and ICs between the soil and water phase. The adsorption-degradation process was dominant, i.e., the enhanced degradation occurred between the ICs and carrier-adsorbed Phe. This study provided new insights on developing a bio-material for efficient bio-remediation of PAHs-contaminated soil.
Asunto(s)
Células Inmovilizadas/metabolismo , Viabilidad Microbiana/efectos de los fármacos , Fenantrenos/análisis , Dióxido de Silicio/química , Contaminantes del Suelo/análisis , Sphingomonas/metabolismo , Madera/química , Adsorción , Biodegradación Ambiental , Células Inmovilizadas/efectos de los fármacos , Modelos Teóricos , Fenantrenos/metabolismo , Suelo/química , Microbiología del Suelo , Contaminantes del Suelo/metabolismo , Sphingomonas/efectos de los fármacosRESUMEN
Plant growth-promoting rhizobacteria play vital roles not only in plant growth, but also in reducing biotic/abiotic stress. Sphingomonas panacis DCY99T is isolated from soil and root of Panax ginseng with rusty root disease, characterized by raised reddish-brown root and this is seriously affects ginseng cultivation. To investigate the relationship between 159 sequenced Sphingomonas strains, pan-genome analysis was carried out, which suggested genomic diversity of the Sphingomonas genus. Comparative analysis of S. panacis DCY99T with Sphingomonas sp. LK11 revealed plant growth-promoting potential of S. panacis DCY99T through indole acetic acid production, phosphate solubilizing, and antifungal abilities. Detailed genomic analysis has shown that S. panacis DCY99T contain various heavy metals resistance genes in its genome and the plasmid. Functional analysis with Sphingomonas paucimobilis EPA505 predicted that S. panacis DCY99T possess genes for degradation of polyaromatic hydrocarbon and phenolic compounds in rusty-ginseng root. Interestingly, when primed ginseng with S. panacis DCY99T during high concentration of iron exposure, iron stress of ginseng was suppressed. In order to detect S. panacis DCY99T in soil, biomarker was designed using spt gene. This study brings new insights into the role of S. panacis DCY99T as a microbial inoculant to protect ginseng plants against rusty root disease.
Asunto(s)
Tolerancia a Medicamentos/genética , Genoma Bacteriano , Hierro/metabolismo , Panax/microbiología , Sphingomonas/genética , Sphingomonas/fisiología , ADN Bacteriano , Genes Bacterianos/genética , Tamaño del Genoma , Hidroxibenzoatos , Hierro/toxicidad , Metales Pesados , Desarrollo de la Planta , Raíces de Plantas/microbiología , Microbiología del Suelo , Sphingomonas/efectos de los fármacos , Sphingomonas/aislamiento & purificación , Estrés FisiológicoRESUMEN
Di-(2-ethylhcxyl) phthalate (DEHP) is applied as plasticizer, which results in the pollution of environment. In this study, the effects of DEHP on soil microbial functions, structure and genetic diversity were investigated. The concentration of DEHP in the soil were 0, 0.1, 1, 10 and 50 mg/kg, and the experimental period were 28 days. DEHP reduced the quantity, abundance, species dominance and homogeneity of soil microbes during the first 14 days. In addition, microbial utilization efficiency of carbon (carbohydrates, aliphatics, amino acids, metabolites) was impacted after 28 days, though the effects gradually weakened. Based on denaturing gradient gel electrophoresis and clone library analysis, in the presence of DEHP, the dominant microbes in the DEHP-contaminated soil were Sphingomonas and Bacillus, which belonged to the Acidobacteria and Proteobacteriav, respectively. With 0.1 or 1 mg/kg of DEHP, the relative abundances of Acidobacteria were higher, and with 10 or 50 mg/kg of DEHP, the relative abundances of Proteobacteria were higher.
Asunto(s)
Dietilhexil Ftalato/toxicidad , Microbiota/efectos de los fármacos , Plastificantes/toxicidad , Microbiología del Suelo , Contaminantes del Suelo/toxicidad , Suelo/química , Bacillus/efectos de los fármacos , Bacillus/metabolismo , Carbono/metabolismo , Dietilhexil Ftalato/análisis , Plastificantes/análisis , Contaminantes del Suelo/análisis , Sphingomonas/efectos de los fármacos , Sphingomonas/metabolismoRESUMEN
Little is known about the effect of ionic liquids (ILs) on the structure of soil microbial communities and resulting biodiversity. Therefore, we studied the influence of six trihexyl(tetradecyl)phosphonium ILs (with either bromide or various organic anions) at sublethal concentrations on the structure of microbial community present in an urban park soil in 100-day microcosm experiments. The biodiversity decreased in all samples (Shannon's index decreased from 1.75 down to 0.74 and OTU's number decreased from 1399 down to 965) with the largest decrease observed in the microcosms spiked with ILs where biodegradation extent was higher than 80%. (i.e. [P66614][Br] and [P66614][2,4,4]). Despite this general decrease in biodiversity, which can be explained by ecotoxic effect of the ILs, the microbial community in the microcosms was enriched with Gram-negative hydrocarbon-degrading genera e.g. Sphingomonas. It is hypothesized that, in addition to toxicity, the observed decrease in biodiversity and change in the microbial community structure may be explained by the primary biodegradation of the ILs or their metabolites by the mentioned genera, which outcompeted other microorganisms unable to degrade ILs or their metabolites. Thus, the introduction of phosphonium-based ILs into soils at sub-lethal concentrations may result not only in a decrease in biodiversity due to toxic effects, but also in enrichment with ILs-degrading bacteria.
Asunto(s)
Líquidos Iónicos/toxicidad , Consorcios Microbianos/efectos de los fármacos , Compuestos Organofosforados/toxicidad , Microbiología del Suelo/normas , Contaminantes del Suelo/toxicidad , Sphingomonas/efectos de los fármacos , Biodegradación Ambiental , Biodiversidad , Líquidos Iónicos/química , Compuestos Organofosforados/química , Polonia , Suelo/química , Contaminantes del Suelo/química , Sphingomonas/metabolismo , UrbanizaciónRESUMEN
The general stress response (GSR) in Alphaproteobacteria was recently shown to be controlled by a partner-switching mechanism that is triggered by phosphorylation of the response regulator PhyR. Activation of PhyR ultimately results in release of the alternative extracytoplasmic function sigma factor σ(EcfG), which redirects transcription toward the GSR. Little is known about the signal transduction pathway(s) controlling PhyR phosphorylation. Here, we identified the single-domain response regulator (SDRR) SdrG and seven histidine kinases, PakA to PakG, belonging to the HWE/HisKA2 family as positive modulators of the GSR in Sphingomonas melonis Fr1. Phenotypic analyses, epistasis experiments, and in vitro phosphorylation assays indicate that Paks directly phosphorylate PhyR and SdrG, and that SdrG acts upstream of or in concert with PhyR, modulating its activity in a nonlinear pathway. Furthermore, we found that additional SDRRs negatively affect the GSR in a way that strictly requires PhyR and SdrG. Finally, analysis of GSR activation by thermal, osmotic, and oxidative stress indicates that Paks display different degrees of redundancy and that a specific kinase can sense multiple stresses, suggesting that the GSR senses a particular condition as a combination of, rather than individual, molecular cues. This study thus establishes the alphaproteobacterial GSR as a complex and interlinked network of two-component systems, in which multiple histidine kinases converge to PhyR, the phosphorylation of which is, in addition, subject to regulation by several SDRRs. Our finding that most HWE/HisKA2 kinases contribute to the GSR in S. melonis Fr1 opens the possibility that this notion might also be true for other Alphaproteobacteria.
Asunto(s)
Alphaproteobacteria/genética , Proteínas Bacterianas/genética , Transducción de Señal/genética , Sphingomonas/genética , Estrés Fisiológico/genética , Alphaproteobacteria/efectos de los fármacos , Alphaproteobacteria/metabolismo , Secuencia de Aminoácidos , Proteínas Bacterianas/metabolismo , Western Blotting , Etanol/farmacología , Regulación Bacteriana de la Expresión Génica/efectos de los fármacos , Histidina Quinasa , Isoenzimas/genética , Isoenzimas/metabolismo , Modelos Genéticos , Datos de Secuencia Molecular , Mutación , Fosforilación , Proteínas Quinasas/genética , Proteínas Quinasas/metabolismo , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa , Homología de Secuencia de Aminoácido , Factor sigma/genética , Factor sigma/metabolismo , Cloruro de Sodio/farmacología , Sphingomonas/efectos de los fármacos , Sphingomonas/metabolismo , Temperatura , terc-Butilhidroperóxido/farmacologíaRESUMEN
Previous study concerning the effects of surfactants on phenanthrene biodegradation focused on observing the changes of cell characteristics of Sphingomonas sp. GY2B. However, the impact of surfactants on the expression of bacterial proteins, controlling phenanthrene transport and catabolism, remains obscure. To overcome the knowledge gap, comparative proteomic approaches were used to investigate protein expressions of Sphingomonas sp. GY2B during phenanthrene biodegradation in the presence and absence of a nonionic surfactant, Tween80. A total of 23 up-regulated and 19 down-regulated proteins were detected upon Tween80 treatment. Tween80 could regulate ion transport (e.g. H+) in cell membrane to provide driving force (ATP) for the transmembrane transport of phenanthrene thus increasing its uptake and biodegradation by GY2B. Moreover, Tween80 probably increased GY2B vitality and growth by inducing the expression of peptidylprolyl isomerase to stabilize cell membrane, increasing the abundances of proteins involved in intracellular metabolic pathways (e.g. TCA cycle), as well as decreasing the abundances of translation/transcription-related proteins and cysteine desulfurase, thereby facilitating phenanthrene biodegradation. This study may facilitate a better understanding of the mechanisms that regulate surfactants-enhanced biodegradation of PAHs at the proteomic level.
Asunto(s)
Fenantrenos/metabolismo , Polisorbatos/farmacología , Proteómica/métodos , Sphingomonas/efectos de los fármacos , Tensoactivos/farmacología , Proteínas Bacterianas/efectos de los fármacos , Proteínas Bacterianas/metabolismo , Biodegradación Ambiental/efectos de los fármacos , Membrana Celular/efectos de los fármacos , Regulación hacia Abajo/efectos de los fármacos , Transporte Iónico/efectos de los fármacos , Hidrocarburos Policíclicos Aromáticos/metabolismo , Regulación hacia Arriba/efectos de los fármacosRESUMEN
The origin of carbapenem-hydrolyzing metallo-ß-lactamases (MBLs) acquired by clinical bacteria is largely unknown. We investigated the frequency, host range, diversity, and functionality of MBLs in the soil microbiota. Twenty-five soil samples of different types and geographical origins were analyzed by antimicrobial selective culture, followed by phenotypic testing and expression of MBL-encoding genes in Escherichia coli, and whole-genome sequencing of MBL-producing strains was performed. Carbapenemase activity was detected in 29 bacterial isolates from 13 soil samples, leading to identification of seven new MBLs in presumptive Pedobacter roseus (PEDO-1), Pedobacter borealis (PEDO-2), Pedobacter kyungheensis (PEDO-3), Chryseobacterium piscium (CPS-1), Epilithonimonas tenax (ESP-1), Massilia oculi (MSI-1), and Sphingomonas sp. (SPG-1). Carbapenemase production was likely an intrinsic feature in Chryseobacterium and Epilithonimonas, as it occurred in reference strains of different species within these genera. The amino acid identity to MBLs described in clinical bacteria ranged between 40 and 69%. Remarkable features of the new MBLs included prophage integration of the encoding gene (PEDO-1), an unusual amino acid residue at a key position for MBL structure and catalysis (CPS-1), and overlap with a putative OXA ß-lactamase (MSI-1). Heterologous expression of PEDO-1, CPS-1, and ESP-1in E. coli significantly increased the MICs of ampicillin, ceftazidime, cefpodoxime, cefoxitin, and meropenem. Our study shows that MBL producers are widespread in soil and include four genera that were previously not known to produce MBLs. The MBLs produced by these bacteria are distantly related to MBLs identified in clinical samples but constitute resistance determinants of clinical relevance if acquired by pathogenic bacteria.
Asunto(s)
Chryseobacterium/enzimología , Pedobacter/enzimología , Microbiología del Suelo , Sphingomonas/enzimología , Resistencia betalactámica/genética , beta-Lactamasas/genética , Secuencia de Aminoácidos , Antibacterianos/farmacología , Carbapenémicos/farmacología , Chryseobacterium/efectos de los fármacos , Chryseobacterium/genética , Chryseobacterium/aislamiento & purificación , Clonación Molecular , Escherichia coli/genética , Escherichia coli/metabolismo , Europa (Continente) , Expresión Génica , Hidrólisis , Datos de Secuencia Molecular , Pedobacter/efectos de los fármacos , Pedobacter/genética , Pedobacter/aislamiento & purificación , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Alineación de Secuencia , Homología de Secuencia de Aminoácido , Sphingomonas/efectos de los fármacos , Sphingomonas/genética , Sphingomonas/aislamiento & purificación , beta-Lactamasas/metabolismoRESUMEN
Surfactant-mediated bioremediation has been widely applied in decontaminating PAH-polluted sites. However, the impacts of surfactants on the biodegradation of PAHs have been controversial in the past years. To gain a clear insight into the influencing mechanisms, three nonionic surfactants (Tween80, TritonX-100 and Brij30) were selected to systematically investigate their effects on cell surface properties (membrane permeability, functional groups and elements), cell vitality as well as subsequent phenanthrene degradation ability of Sphingomonas sp. GY2B. Results showed that biodegradation of phenanthrene was stimulated by Tween80, slightly inhibited by TritonX-100 and severely inhibited by Brij30, respectively. Positive effect of Tween80 may arise from its role as the additional carbon source for GY2B to increase bacterial growth and activity, as demonstrated by the increasing viable cells in Tween80 amended degradation systems determined by flow cytometry. Although TritonX-100 could inhibit bacterial growth and disrupt cell membrane, its adverse impacts on microbial cells were weaker than Brij30, which may result in its weaker inhibitive extent. Results from this study can provide a rational basis on selecting surfactants for enhancing bioremediation of PAHs.
Asunto(s)
Fenantrenos/metabolismo , Sphingomonas/efectos de los fármacos , Tensoactivos/química , Biodegradación Ambiental , Membrana Celular/efectos de los fármacos , Membrana Celular/metabolismo , Viabilidad Microbiana/efectos de los fármacos , Octoxinol/química , Polidocanol , Hidrocarburos Policíclicos Aromáticos/metabolismo , Polietilenglicoles/química , Polisorbatos/química , Sphingomonas/metabolismoRESUMEN
Nano bamboo charcoal (NBC) has been commonly used in the production of textiles, plastics, paint, etc. However, little is known regarding their effects towards the microorganisms. The effects of NBC on phenanthrene degrading strain Sphingomonas sp. GY2B were investigated in the present study. Results showed that the addition of NBC could improve the phenanthrene removal by Sphingomonas sp. GY2B, with removal efficiencies increased by 10.29-18.56% in comparison to the control at 24h, and phenanthrene was almost completely removed at 48h. With the presence of low dose of NBC (20 and 50mgL(-1)), strain GY2B displayed a better growth at 6h, suggesting that NBC was beneficial to the growth of GY2B and thus resulting in the quick removal of phenanthrene from water. However, the growth of strain GY2B in high dose of NBC (200mgL(-1)) was inhibited at 6h, and the inhibition could be attenuated and eliminated after 12h. NBC-effected phenanthrene solubility experiment suggested that NBC makes a negligible contribution to the solubilization of phenanthrene in water. Results of electronic microscopy analysis (SEM and TEM) indicated NBC may interact with the cell membrane, causing the enhanced membrane permeability and then NBC adsorbed on the membrane would enter into the cells. The findings of this work would provide important information for the future usage and long-term environmental risk assessment of NBC.
Asunto(s)
Biodegradación Ambiental , Carbón Orgánico/farmacología , Fenantrenos/metabolismo , Sphingomonas/efectos de los fármacos , Adsorción/efectos de los fármacos , Membrana Celular/efectos de los fármacos , Proliferación Celular/efectos de los fármacos , Carbón Orgánico/metabolismo , Nanopartículas/metabolismo , Solubilidad/efectos de los fármacos , Sphingomonas/crecimiento & desarrollo , Sphingomonas/metabolismoRESUMEN
Sphingomonas koreensis is an aerobic Gram-negative rod originally described in 2001 following isolation from natural mineral water in Korea. Here, we report a case study with Sphingomonas koreensis as the causative agent of meningitis. To our knowledge, this is the first documented case of Sphingomonas koreensis as a human pathogen.
Asunto(s)
Infecciones por Bacterias Gramnegativas/diagnóstico , Infecciones por Bacterias Gramnegativas/microbiología , Meningitis Bacterianas/diagnóstico , Meningitis Bacterianas/microbiología , Sphingomonas/aislamiento & purificación , Adolescente , Antibacterianos/farmacología , Técnicas Bacteriológicas , ADN Bacteriano/química , ADN Bacteriano/genética , ADN Ribosómico/química , ADN Ribosómico/genética , Femenino , Humanos , Corea (Geográfico) , Datos de Secuencia Molecular , ARN Ribosómico 16S/genética , Análisis de Secuencia de ADN , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción , Sphingomonas/clasificación , Sphingomonas/efectos de los fármacosRESUMEN
A fusant strain F14 with high biodegradation capability of phenanthrene was obtained by protoplast fusion between Sphingomonas sp. GY2B (GenBank DQ139343) and Pseudomonas sp. GP3A (GenBank EU233280). F14 was screened and identified from 39 random fusants by antibiotic tests, scanning electron microscope (SEM) and randomly amplified polymorphic DNA (RAPD). The result of SEM analysis demonstrated that the cell shape of fusant F14 different from parental strains. RAPD analysis of 5 primers generated a total of 70 bands. The genetic similarity indices between F14 and parental strains GY2B and GP3A were 27.9 and 34.6 %, respectively. F14 could rapidly degrade phenanthrene within 24 h, and the degradation efficiency was much better than GY2B and GP3A. GC-MS analysis of metabolites of phenanthrene degradation indicated F14 had a different degradation pathway from GY2B. Furthermore, the fusant strain F14 had a wider adaptation of temperatures (25-36 °C) and pH values (6.5-9.0) than GY2B. The present study indicated that fusant strain F14 could be an effective and environment-friendly bacterial strain for PAHs bioremediation.
Asunto(s)
Fenantrenos/metabolismo , Protoplastos/metabolismo , Pseudomonas/metabolismo , Sphingomonas/metabolismo , Biodegradación Ambiental , Ceftazidima/farmacología , Farmacorresistencia Bacteriana , Microscopía Electrónica de Rastreo , Piperacilina/farmacología , Hidrocarburos Policíclicos Aromáticos/metabolismo , Protoplastos/química , Protoplastos/efectos de los fármacos , Pseudomonas/efectos de los fármacos , Técnica del ADN Polimorfo Amplificado Aleatorio , Sphingomonas/efectos de los fármacosRESUMEN
Here, we suggest that natural streptomycin resistance of many sphingomonads resides within rpsL. We constructed a dominant, streptomycin-sensitive rpsL allele and demonstrated its use as a counterselection marker in several sphingomonads. An rpsL-based markerless gene deletion system was developed and validated by deleting four genes in Sphingomonas sp. strain Fr1.
Asunto(s)
Eliminación de Gen , Genética Microbiana/métodos , Proteínas Ribosómicas/genética , Sphingomonas/genética , Antibacterianos/farmacología , Biota , Análisis por Conglomerados , ADN Bacteriano/química , ADN Bacteriano/genética , Farmacorresistencia Bacteriana , Genotipo , Datos de Secuencia Molecular , Análisis de Secuencia de ADN , Sphingomonas/efectos de los fármacos , Estreptomicina/farmacologíaRESUMEN
Environmental biodegradation of several chlorinated pesticides is limited by their low solubility and sorption to soil surfaces. To mitigate this problem we quantified the effect of three biosurfactant viz., rhamnolipid, sophorolipid and trehalose-containing lipid on the dissolution, bioavailability, and biodegradation of HCH-isomers in liquid culture and in contaminated soil. The effect of biosurfactants was evaluated through the critical micelle concentration (CMC) value as determined for each isomer. The surfactant increased the solubilization of HCH isomers by 3-9 folds with rhamnolipid and sophorolipid being more effective and showing maximum solubilization of HCH isomers at 40 µg/mL, compared to trehalose-containing lipid showing peak solubilization at 60 µg/mL. The degradation of HCH isomers by Sphingomonas sp. NM05 in surfactant-amended liquid mineral salts medium showed 30% enhancement in 2 days as compared to degradation in 10 days in the absence of surfactant. HCH-spiked soil slurry incubated with surfactant also showed around 30-50% enhanced degradation of HCH which was comparable to the corresponding batch culture experiments. Among the three surfactants, sophorolipid offered highest solubilization and enhanced degradation of HCH isomers both in liquid medium and soil culture. The results of this study suggest the effectiveness of surfactants in improving HCH degradation by increased bioaccessibility.
Asunto(s)
Hexaclorociclohexano/química , Hexaclorociclohexano/metabolismo , Sphingomonas/efectos de los fármacos , Sphingomonas/metabolismo , Tensoactivos/farmacología , Biodegradación Ambiental/efectos de los fármacos , Glucolípidos/farmacología , Isomerismo , Contaminantes del Suelo/aislamiento & purificación , Solubilidad/efectos de los fármacos , Trehalosa/farmacologíaRESUMEN
The terpene 2-methylisoborneol (MIB), a major cause of off-flavor in farm-raised catfish and drinking water, is transformed by various different terpene-degrading bacteria. Two of these, the R-limonene-degrading strains Pseudomonas sp. 19-rlim and Sphingomonas sp. BIR2-rlima, dehydrated MIB with the formation of odorless metabolites 2-methylenebornane and 4-methylcamphene. These metabolites which have a structural resemblance to camphor, could be further transformed by camphor-degrading bacteria to more oxidized products. The bacterial dehydrations demonstrated here may have application in removing MIB where it is a problem.
Asunto(s)
Canfanos/metabolismo , Ciclohexenos/metabolismo , Odorantes/análisis , Pseudomonas/metabolismo , Sphingomonas/metabolismo , Terpenos/metabolismo , Ácidos , Biodegradación Ambiental/efectos de los fármacos , Biotransformación/efectos de los fármacos , Canfanos/química , Alcanfor/farmacología , Catálisis/efectos de los fármacos , Ciclohexenos/química , Limoneno , Espectrometría de Masas , Oxidación-Reducción/efectos de los fármacos , Pseudomonas/efectos de los fármacos , Sphingomonas/efectos de los fármacos , Terpenos/químicaRESUMEN
AIMS: The objective of this study was to apply the knowledge-based approach to the selection of an inoculum to be used in bioaugmentation processes to facilitate phenanthrene degradation in phenanthrene- and Cr(VI)-co-contaminated soils. METHODS AND RESULTS: The bacterial community composition of phenanthrene and phenanthrene- and Cr(VI)-co-contaminated microcosms, determined by denaturing gradient gel electrophoresis analysis, showed that members of the Sphingomonadaceae family were the predominant micro-organisms. However, the Cr(VI) contamination produced a selective change of predominant Sphingomonas species, and in co-contaminated soil microcosms, a population closely related to Sphingomonas paucimobilis was naturally selected. The bioaugmentation process was carried out using the phenanthrene-degrading strain S. paucimobilis 20006FA, isolated and characterized in our laboratory. Although the strain showed a low Cr(VI) resistance (0·250 mmol l⻹); in liquid culture, it was capable of reducing chromate and degrading phenanthrene simultaneously. CONCLUSION: The inoculation of this strain managed to moderate the effect of the presence of Cr(VI), increasing the biological activity and phenanthrene degradation rate in co-contaminated microcosm. SIGNIFICANCE AND IMPACT OF THE STUDY: In this study, we have applied a novel approach to the selection of the adequate inoculum to enhance the phenanthrene degradation in phenanthrene- and Cr(VI)-co-contaminated soils.
Asunto(s)
Cromo/metabolismo , Fenantrenos/metabolismo , Microbiología del Suelo , Contaminantes del Suelo/metabolismo , Sphingomonas/aislamiento & purificación , Sphingomonas/metabolismo , Bacterias/efectos de los fármacos , Bacterias/genética , Bacterias/aislamiento & purificación , Bacterias/metabolismo , Biodegradación Ambiental , Filogenia , Sphingomonas/efectos de los fármacos , Sphingomonas/genéticaRESUMEN
Biofilms cause runnability problems in paper machines and are therefore controlled with biocides. Peracetic acid is usually effective in preventing bulky biofilms. This study investigated the microbiological status of a paper machine where low concentrations (≤ 15 ppm active ingredient) of peracetic acid had been used for several years. The paper machine contained a low amount of biofilms. Biofilm-forming bacteria from this environment were isolated and characterized by 16S rRNA gene sequencing, whole-cell fatty acid analysis, biochemical tests, and DNA fingerprinting. Seventy-five percent of the isolates were identified as members of the subclades Sphingomonas trueperi and S. aquatilis, and the others as species of the genera Burkholderia (B. cepacia complex), Methylobacterium, and Rhizobium. Although the isolation media were suitable for the common paper machine biofoulers Deinococcus, Meiothermus, and Pseudoxanthomonas, none of these were found, indicating that peracetic acid had prevented their growth. Spontaneous, irreversible loss of the ability to form biofilm was observed during subculturing of certain isolates of the subclade S. trueperi. The Sphingomonas isolates formed monoculture biofilms that tolerated peracetic acid at concentrations (10 ppm active ingredient) used for antifouling in paper machines. High pH and low conductivity of the process waters favored the peracetic acid tolerance of Sphingomonas sp. biofilms. This appears to be the first report on sphingomonads as biofilm formers in warm water using industries.
Asunto(s)
Biopelículas/efectos de los fármacos , Desinfectantes/farmacología , Ácido Peracético/farmacología , Sphingomonas/efectos de los fármacos , Sphingomonas/fisiología , Bacterias/clasificación , Bacterias/efectos de los fármacos , Bacterias/aislamiento & purificación , Fenómenos Fisiológicos Bacterianos , Biopelículas/crecimiento & desarrollo , Papel , Sphingomonas/aislamiento & purificaciónRESUMEN
In this study, 20 samples from three different sources of animal feed were investigated and six bacterial isolates were identified. The susceptibility of four natural antimicrobials, namely, eugenol, cinnamaldehyde, thymol, and carvacrol, against six of these isolates was determined. Carvacrol and eugenol showed better inhibitory effects with larger zones of inhibition. The minimal inhibitory concentration for a range of antibiotics on the susceptibility of two isolates (namely, Sphingomonas paucimobilis and Klebsiella oxytoca) was investigated using the VITEK® 2 microbiological identification system. Both isolates showed a variety of resistance to 18 antibiotics. The minimal inhibitory concentration and fractional inhibitory concentration index of those two isolates for ampicillin and nitrofurantoin in combination with four phenolic compounds was determined. Synergistic interactions were found for most antimicrobial/antibiotic combinations; thymol and carvacrol were very effective (fractional inhibitory concentration ≤0.5) in combination with all antibiotics tested against S. paucimobilis and K. oxytoca, respectively. Ultra performance liquid chromatography techniques were used to investigate the physiological effects of the four natural antimicrobials against those two isolates. Two identical peaks were found to be systematically different between cinnamaldehyde-treated and -untreated cells. The identity of the peaks is unknown and further investigation is needed.
Asunto(s)
Alimentación Animal/microbiología , Antiinfecciosos/farmacología , Farmacorresistencia Bacteriana , Klebsiella oxytoca/efectos de los fármacos , Extractos Vegetales/farmacología , Sphingomonas/efectos de los fármacos , Acroleína/análogos & derivados , Acroleína/farmacología , Ampicilina/farmacología , Animales , Bovinos , Cimenos , Relación Dosis-Respuesta a Droga , Sinergismo Farmacológico , Patos , Eugenol/farmacología , Microbiología de Alimentos , Klebsiella oxytoca/fisiología , Pruebas de Sensibilidad Microbiana , Monoterpenos/farmacología , Nitrofurantoína/farmacología , Percepción de Quorum/efectos de los fármacos , Sphingomonas/fisiología , Porcinos , Timol/farmacologíaRESUMEN
BACKGROUND: Disaccharides are, in general, the first choice as formulation compounds when freeze-drying microorganisms. Although polysaccharides and other biopolymers are considered too large to stabilise and interact with cell components in the same beneficial way as disaccharides, polymers have been reported to support cell survival. In the present study we compare the efficiency of sucrose and the polymers Ficoll, hydroxyethylcellulose, hydroxypropylmethylcellulose and polyvinylalcohol to support the survival of three bacterial strains during freeze drying. The initial osmotic conditions were adjusted to be similar for all formulations. Formulation characterisation was used to interpret the impact that different compound properties had on cell survival. RESULTS: Despite differences in molecular size, both sucrose and the sucrose-based polymer Ficoll supported cell survival after freeze drying equally well. All formulations became amorphous upon dehydration. Scanning electron microscopy and X-ray diffraction data showed that the discerned differences in structure of the dry formulations had little impact on the survival rates. The capability of the polymers to support cell survival correlated with the surface activity of the polymers in a similar way for all investigated bacterial strains. CONCLUSION: Polymer-based formulations can support cell survival as effectively as disaccharides if formulation properties of importance for maintaining cell viability are identified and controlled.