Current methods for molecular typing of Campylobacter species.
J Microbiol Methods
; 95(1): 24-31, 2013 Oct.
Article
en En
| MEDLINE
| ID: mdl-23871858
Campylobacter remains one of the most common bacterial causes of gastroenteritis worldwide. Tracking sources of this organism is challenging due to the large numbers of human cases, and the prevalence of this organism throughout the environment due to growth in a wide range of animal species. Many molecular subtyping methods have been developed to characterize Campylobacter species, but only a few are commonly used in molecular epidemiology studies. This review examines the applicability of these methods, as well as the role that emerging whole genome sequencing technologies will play in tracking sources of Campylobacter spp. infection.
Palabras clave
CGF; Campylobacter; Comparative genomic fingerprinting; HRM; MCGH; MLST; Molecular typing; Multi-locus sequence typing; NGS; PFGE; RAPD; SNPs; WGS; Whole genome sequencing; comparative genomic fingerprinting; eMLST; extended MLST; flaA restriction fragment length polymorphism analysis; flaA short variable region sequence typing; flaA-RFLP; flaA-SVR; high-resolution melting analysis; microarray comparative genomic hybridization; multi-locus sequence typing; next-generation sequencing; pulsed field gel electrophoresis; random amplification of polymorphic DNA; single nucleotide polymorphisms; whole genome sequencing
Texto completo:
1
Banco de datos:
MEDLINE
Asunto principal:
Campylobacter
/
Tipificación Molecular
Tipo de estudio:
Risk_factors_studies
Límite:
Animals
/
Humans
Idioma:
En
Revista:
J Microbiol Methods
Año:
2013
Tipo del documento:
Article
País de afiliación:
Canadá