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Genome sequence of bubaline alphaherpesvirus 1 (BuHV1) isolated in Australia in 1972.
Scheffer, Camila Mengue; Varela, Ana Paula Muterle; Cibulski, Samuel Paulo; Schmidt, Candice; Campos, Fabrício Souza; Paim, Willian Pinto; Dos Santos, Raíssa Nunes; Teixeira, Thais Fumaco; Loiko, Márcia Regina; Tochetto, Caroline; Dos Santos, Helton Fernandes; de Lima, Diane Alves; Cerva, Cristine; Mayer, Fabiana Quoos; Petzhold, Sylio Alfredo; Franco, Ana Cláudia; George, Toby St; Spilki, Fernando Rosado; Roehe, Paulo Michel.
Afiliación
  • Scheffer CM; Institute of Veterinary Research "Desidério Finamor" (IPVDF), Estrada do Conde 6000, Eldorado do Sul, Rio Grande do Sul, CEP 92990-000, Brazil. scheffer.cm@gmail.com.
  • Varela AP; Virology Laboratory, Department of Microbiology, Immunology and Parasitology, Institute of Basic Health Sciences, Federal University of Rio Grande do Sul (UFRGS), Rua Sarmento Leite 500, Porto Alegre, Rio Grande do Sul, CEP 90050-170, Brazil. scheffer.cm@gmail.com.
  • Cibulski SP; Institute of Veterinary Research "Desidério Finamor" (IPVDF), Estrada do Conde 6000, Eldorado do Sul, Rio Grande do Sul, CEP 92990-000, Brazil.
  • Schmidt C; Virology Laboratory, Department of Microbiology, Immunology and Parasitology, Institute of Basic Health Sciences, Federal University of Rio Grande do Sul (UFRGS), Rua Sarmento Leite 500, Porto Alegre, Rio Grande do Sul, CEP 90050-170, Brazil.
  • Campos FS; Institute of Veterinary Research "Desidério Finamor" (IPVDF), Estrada do Conde 6000, Eldorado do Sul, Rio Grande do Sul, CEP 92990-000, Brazil.
  • Paim WP; Virology Laboratory, Department of Microbiology, Immunology and Parasitology, Institute of Basic Health Sciences, Federal University of Rio Grande do Sul (UFRGS), Rua Sarmento Leite 500, Porto Alegre, Rio Grande do Sul, CEP 90050-170, Brazil.
  • Dos Santos RN; Institute of Veterinary Research "Desidério Finamor" (IPVDF), Estrada do Conde 6000, Eldorado do Sul, Rio Grande do Sul, CEP 92990-000, Brazil.
  • Teixeira TF; Virology Laboratory, Department of Microbiology, Immunology and Parasitology, Institute of Basic Health Sciences, Federal University of Rio Grande do Sul (UFRGS), Rua Sarmento Leite 500, Porto Alegre, Rio Grande do Sul, CEP 90050-170, Brazil.
  • Loiko MR; Virology Laboratory, Department of Microbiology, Immunology and Parasitology, Institute of Basic Health Sciences, Federal University of Rio Grande do Sul (UFRGS), Rua Sarmento Leite 500, Porto Alegre, Rio Grande do Sul, CEP 90050-170, Brazil.
  • Tochetto C; Institute of Veterinary Research "Desidério Finamor" (IPVDF), Estrada do Conde 6000, Eldorado do Sul, Rio Grande do Sul, CEP 92990-000, Brazil.
  • Dos Santos HF; Virology Laboratory, Department of Microbiology, Immunology and Parasitology, Institute of Basic Health Sciences, Federal University of Rio Grande do Sul (UFRGS), Rua Sarmento Leite 500, Porto Alegre, Rio Grande do Sul, CEP 90050-170, Brazil.
  • de Lima DA; Virology Laboratory, Department of Microbiology, Immunology and Parasitology, Institute of Basic Health Sciences, Federal University of Rio Grande do Sul (UFRGS), Rua Sarmento Leite 500, Porto Alegre, Rio Grande do Sul, CEP 90050-170, Brazil.
  • Cerva C; Virology Laboratory, Department of Microbiology, Immunology and Parasitology, Institute of Basic Health Sciences, Federal University of Rio Grande do Sul (UFRGS), Rua Sarmento Leite 500, Porto Alegre, Rio Grande do Sul, CEP 90050-170, Brazil.
  • Mayer FQ; Institute of Veterinary Research "Desidério Finamor" (IPVDF), Estrada do Conde 6000, Eldorado do Sul, Rio Grande do Sul, CEP 92990-000, Brazil.
  • Petzhold SA; Virology Laboratory, Department of Microbiology, Immunology and Parasitology, Institute of Basic Health Sciences, Federal University of Rio Grande do Sul (UFRGS), Rua Sarmento Leite 500, Porto Alegre, Rio Grande do Sul, CEP 90050-170, Brazil.
  • Franco AC; Institute of Veterinary Research "Desidério Finamor" (IPVDF), Estrada do Conde 6000, Eldorado do Sul, Rio Grande do Sul, CEP 92990-000, Brazil.
  • George TS; Virology Laboratory, Department of Microbiology, Immunology and Parasitology, Institute of Basic Health Sciences, Federal University of Rio Grande do Sul (UFRGS), Rua Sarmento Leite 500, Porto Alegre, Rio Grande do Sul, CEP 90050-170, Brazil.
  • Spilki FR; Virology Laboratory, Department of Microbiology, Immunology and Parasitology, Institute of Basic Health Sciences, Federal University of Rio Grande do Sul (UFRGS), Rua Sarmento Leite 500, Porto Alegre, Rio Grande do Sul, CEP 90050-170, Brazil.
  • Roehe PM; Institute of Veterinary Research "Desidério Finamor" (IPVDF), Estrada do Conde 6000, Eldorado do Sul, Rio Grande do Sul, CEP 92990-000, Brazil.
Arch Virol ; 162(5): 1169-1176, 2017 May.
Article en En | MEDLINE | ID: mdl-28063080
ABSTRACT
Bubaline alphaherpesvirus 1 (BuHV1) is a member of the family Herpesviridae, subfamily Alphaherpesvirinae, genus Varicellovirus. To date, no full genome sequence of BuHV has been published. Here, we report the complete genome sequence of bubaline alphaherpesvirus 1 (BuHV1) strain b6 (BuHV1-b6), isolated from a water buffalo (Bubalus bubalis) in 1972 in Australia. The virus was multiplied in MDBK cells, and the DNA was extracted and subjected to high-throughput sequencing. The reads were aligned and combined into a single genome sequence, with bovine alphaherpesvirus 5 (BoHV5) strain SV507/99 (accession number NC005261) as a reference. The BuHV1-b6 genome is a linear double-stranded DNA molecule, 137,452 bp long, with a GC content of 76.8%. The genome consists of two unique sequences a long, or UL, sequence (103,818 bp) and a short, or US, sequence (9,586 bp), with the latter being flanked by inverted IR and TR elements of 12,024 bp each. The arrangement is typical of herpesvirus genomes of the D-type. The overall sequence has a 92.2% similarity at the nucleotide level to the reference BoHV5 strain. Our report provides a significant landmark in the history of herpesviruses, represented by the genome sequence of this 44-year-old virus isolate.
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Texto completo: 1 Banco de datos: MEDLINE Asunto principal: ADN Viral / Búfalos / Genoma Viral / Varicellovirus Límite: Animals País/Región como asunto: Oceania Idioma: En Revista: Arch Virol Año: 2017 Tipo del documento: Article País de afiliación: Brasil
Texto completo
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PubMed Links
Buscar en Google

Texto completo: 1 Banco de datos: MEDLINE Asunto principal: ADN Viral / Búfalos / Genoma Viral / Varicellovirus Límite: Animals País/Región como asunto: Oceania Idioma: En Revista: Arch Virol Año: 2017 Tipo del documento: Article País de afiliación: Brasil