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Density functional tight-binding and infrequent metadynamics can capture entropic effects in intramolecular hydrogen transfer reactions.
Oliveira, Luiz F L; Fu, Christopher D; Pfaendtner, Jim.
Afiliación
  • Oliveira LFL; Department of Chemical Engineering, University of Washington, Seattle, Washington 98195, USA.
  • Fu CD; Department of Chemical Engineering, University of Washington, Seattle, Washington 98195, USA.
  • Pfaendtner J; Department of Chemical Engineering, University of Washington, Seattle, Washington 98195, USA.
J Chem Phys ; 148(15): 154101, 2018 Apr 21.
Article en En | MEDLINE | ID: mdl-29679963
ABSTRACT
Infrequent metadynamics uses biased simulations to estimate the unbiased kinetics of a system, facilitating the calculation of rates and barriers. Here the method is applied to study intramolecular hydrogen transfer reactions involving peroxy radicals, a class of reactions that is challenging to model due to the entropic contributions of the formation of ring structures in the transition state. Using the self-consistent charge density-functional based tight-binding (DFTB) method, we applied infrequent metadynamics to the study of four intramolecular H-transfer reactions, demonstrating that the method can qualitatively reproduce these high entropic contributions, as observed in experiments and those predicted by transition state theory modeled by higher levels of theory. We also show that infrequent metadynamics and DFTB are successful in describing the relationship between transition state ring size and kinetic coefficients (e.g., activation energies and the pre-exponential factors).

Texto completo: 1 Banco de datos: MEDLINE Tipo de estudio: Prognostic_studies Idioma: En Revista: J Chem Phys Año: 2018 Tipo del documento: Article País de afiliación: Estados Unidos

Texto completo: 1 Banco de datos: MEDLINE Tipo de estudio: Prognostic_studies Idioma: En Revista: J Chem Phys Año: 2018 Tipo del documento: Article País de afiliación: Estados Unidos