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Capturing sequence diversity in metagenomes with comprehensive and scalable probe design.
Metsky, Hayden C; Siddle, Katherine J; Gladden-Young, Adrianne; Qu, James; Yang, David K; Brehio, Patrick; Goldfarb, Andrew; Piantadosi, Anne; Wohl, Shirlee; Carter, Amber; Lin, Aaron E; Barnes, Kayla G; Tully, Damien C; Corleis, BjÓ§rn; Hennigan, Scott; Barbosa-Lima, Giselle; Vieira, Yasmine R; Paul, Lauren M; Tan, Amanda L; Garcia, Kimberly F; Parham, Leda A; Odia, Ikponmwosa; Eromon, Philomena; Folarin, Onikepe A; Goba, Augustine; Simon-Lorière, Etienne; Hensley, Lisa; Balmaseda, Angel; Harris, Eva; Kwon, Douglas S; Allen, Todd M; Runstadler, Jonathan A; Smole, Sandra; Bozza, Fernando A; Souza, Thiago M L; Isern, Sharon; Michael, Scott F; Lorenzana, Ivette; Gehrke, Lee; Bosch, Irene; Ebel, Gregory; Grant, Donald S; Happi, Christian T; Park, Daniel J; Gnirke, Andreas; Sabeti, Pardis C; Matranga, Christian B.
Afiliación
  • Metsky HC; Broad Institute of MIT and Harvard, Cambridge, MA, USA. hayden@mit.edu.
  • Siddle KJ; Department of Electrical Engineering and Computer Science, Massachusetts Institute of Technology, Cambridge, MA, USA. hayden@mit.edu.
  • Gladden-Young A; Broad Institute of MIT and Harvard, Cambridge, MA, USA. kjsiddle@broadinstitute.org.
  • Qu J; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA. kjsiddle@broadinstitute.org.
  • Yang DK; Broad Institute of MIT and Harvard, Cambridge, MA, USA.
  • Brehio P; Broad Institute of MIT and Harvard, Cambridge, MA, USA.
  • Goldfarb A; Broad Institute of MIT and Harvard, Cambridge, MA, USA.
  • Piantadosi A; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA.
  • Wohl S; Broad Institute of MIT and Harvard, Cambridge, MA, USA.
  • Carter A; Faculty of Arts and Sciences, Harvard University, Cambridge, MA, USA.
  • Lin AE; Broad Institute of MIT and Harvard, Cambridge, MA, USA.
  • Barnes KG; Division of Infectious Diseases, Massachusetts General Hospital, Boston, MA, USA.
  • Tully DC; Broad Institute of MIT and Harvard, Cambridge, MA, USA.
  • Corleis B; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA.
  • Hennigan S; Broad Institute of MIT and Harvard, Cambridge, MA, USA.
  • Barbosa-Lima G; Broad Institute of MIT and Harvard, Cambridge, MA, USA.
  • Vieira YR; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA.
  • Paul LM; Broad Institute of MIT and Harvard, Cambridge, MA, USA.
  • Tan AL; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA.
  • Garcia KF; Department of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health, Harvard University, Boston, MA, USA.
  • Parham LA; The Ragon Institute of MGH, MIT and Harvard, Cambridge, MA, USA.
  • Odia I; The Ragon Institute of MGH, MIT and Harvard, Cambridge, MA, USA.
  • Eromon P; Massachusetts Department of Public Health, Boston, MA, USA.
  • Folarin OA; Fundação Oswaldo Cruz (FIOCRUZ), Rio de Janeiro, Rio de Janeiro, Brazil.
  • Goba A; Fundação Oswaldo Cruz (FIOCRUZ), Rio de Janeiro, Rio de Janeiro, Brazil.
  • Simon-Lorière E; Department of Biological Sciences, College of Arts and Sciences, Florida Gulf Coast University, Fort Myers, FL, USA.
  • Hensley L; Instituto de Investigacion en Microbiologia, Universidad Nacional Autónoma de Honduras, Tegucigalpa, Honduras.
  • Balmaseda A; Instituto de Investigacion en Microbiologia, Universidad Nacional Autónoma de Honduras, Tegucigalpa, Honduras.
  • Harris E; Institute of Lassa Fever Research and Control, Irrua Specialist Teaching Hospital, Irrua, Nigeria.
  • Kwon DS; African Center of Excellence for Genomics of Infectious Disease (ACEGID), Redeemer's University, Ede, Nigeria.
  • Allen TM; African Center of Excellence for Genomics of Infectious Disease (ACEGID), Redeemer's University, Ede, Nigeria.
  • Runstadler JA; Department of Biological Sciences, College of Natural Sciences, Redeemer's University, Ede, Nigeria.
  • Smole S; Lassa Fever Laboratory, Kenema Government Hospital, Kenema, Sierra Leone.
  • Souza TML; Evolutionary Genomics of RNA Viruses, Virology Department, Institut Pasteur, Paris, France.
  • Isern S; Integrated Research Facility, Division of Clinical Research, National Institute of Allergy and Infectious Diseases, US National Institutes of Health, Frederick, MD, USA.
  • Michael SF; Laboratorio Nacional de Virología, Centro Nacional de Diagnóstico y Referencia, Ministry of Health, Managua, Nicaragua.
  • Lorenzana I; Division of Infectious Diseases and Vaccinology, School of Public Health, University of California, Berkeley, Berkeley, CA, USA.
  • Gehrke L; Division of Infectious Diseases, Massachusetts General Hospital, Boston, MA, USA.
  • Bosch I; The Ragon Institute of MGH, MIT and Harvard, Cambridge, MA, USA.
  • Ebel G; The Ragon Institute of MGH, MIT and Harvard, Cambridge, MA, USA.
  • Grant DS; Department of Infectious Disease and Global Health, Cummings School of Veterinary Medicine, Tufts University, North Grafton, MA, USA.
  • Happi CT; Massachusetts Department of Public Health, Boston, MA, USA.
  • Park DJ; Fundação Oswaldo Cruz (FIOCRUZ), Rio de Janeiro, Rio de Janeiro, Brazil.
  • Gnirke A; Fundação Oswaldo Cruz (FIOCRUZ), Rio de Janeiro, Rio de Janeiro, Brazil.
  • Sabeti PC; Department of Biological Sciences, College of Arts and Sciences, Florida Gulf Coast University, Fort Myers, FL, USA.
  • Matranga CB; Department of Biological Sciences, College of Arts and Sciences, Florida Gulf Coast University, Fort Myers, FL, USA.
Nat Biotechnol ; 37(2): 160-168, 2019 02.
Article en En | MEDLINE | ID: mdl-30718881
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Texto completo: 1 Banco de datos: MEDLINE Asunto principal: Genoma Viral / Biología Computacional / Metagenoma / Metagenómica Límite: Animals / Humans País/Región como asunto: Africa Idioma: En Revista: Nat Biotechnol Asunto de la revista: BIOTECNOLOGIA Año: 2019 Tipo del documento: Article País de afiliación: Estados Unidos
Texto completo
Imprimir
XML
PubMed Links
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Texto completo: 1 Banco de datos: MEDLINE Asunto principal: Genoma Viral / Biología Computacional / Metagenoma / Metagenómica Límite: Animals / Humans País/Región como asunto: Africa Idioma: En Revista: Nat Biotechnol Asunto de la revista: BIOTECNOLOGIA Año: 2019 Tipo del documento: Article País de afiliación: Estados Unidos