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Deciphering how naturally occurring sequence features impact the phase behaviours of disordered prion-like domains.
Bremer, Anne; Farag, Mina; Borcherds, Wade M; Peran, Ivan; Martin, Erik W; Pappu, Rohit V; Mittag, Tanja.
Afiliación
  • Bremer A; Department of Structural Biology, St Jude Children's Research Hospital, Memphis, TN, USA.
  • Farag M; Department of Biomedical Engineering and Center for Science & Engineering of Living Systems (CSELS), Washington University in St Louis, St Louis, MO, USA.
  • Borcherds WM; Department of Structural Biology, St Jude Children's Research Hospital, Memphis, TN, USA.
  • Peran I; Department of Structural Biology, St Jude Children's Research Hospital, Memphis, TN, USA.
  • Martin EW; Department of Structural Biology, St Jude Children's Research Hospital, Memphis, TN, USA.
  • Pappu RV; Department of Biomedical Engineering and Center for Science & Engineering of Living Systems (CSELS), Washington University in St Louis, St Louis, MO, USA. pappu@wustl.edu.
  • Mittag T; Department of Structural Biology, St Jude Children's Research Hospital, Memphis, TN, USA. tanja.mittag@stjude.org.
Nat Chem ; 14(2): 196-207, 2022 02.
Article en En | MEDLINE | ID: mdl-34931046
ABSTRACT
Prion-like low-complexity domains (PLCDs) have distinctive sequence grammars that determine their driving forces for phase separation. Here we uncover the physicochemical underpinnings of how evolutionarily conserved compositional biases influence the phase behaviour of PLCDs. We interpret our results in the context of the stickers-and-spacers model for the phase separation of associative polymers. We find that tyrosine is a stronger sticker than phenylalanine, whereas arginine is a context-dependent auxiliary sticker. In contrast, lysine weakens sticker-sticker interactions. Increasing the net charge per residue destabilizes phase separation while also weakening the strong coupling between single-chain contraction in dilute phases and multichain interactions that give rise to phase separation. Finally, glycine and serine residues act as non-equivalent spacers, and thus make the glycine versus serine contents an important determinant of the driving forces for phase separation. The totality of our results leads to a set of rules that enable comparative estimates of composition-specific driving forces for PLCD phase separation.
Asunto(s)

Texto completo: 1 Banco de datos: MEDLINE Asunto principal: Priones / Proteínas Intrínsecamente Desordenadas / Dominios Proteicos Idioma: En Revista: Nat Chem Asunto de la revista: QUIMICA Año: 2022 Tipo del documento: Article País de afiliación: Estados Unidos

Texto completo: 1 Banco de datos: MEDLINE Asunto principal: Priones / Proteínas Intrínsecamente Desordenadas / Dominios Proteicos Idioma: En Revista: Nat Chem Asunto de la revista: QUIMICA Año: 2022 Tipo del documento: Article País de afiliación: Estados Unidos