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Pediococcus pentosaceus IMI 507025 genome sequencing data.
Nikodinoska, Ivana; Makkonen, Jenny; Blande, Daniel; Moran, Colm.
Afiliación
  • Nikodinoska I; Alltech European Headquarters, Sarney, Summerhill Road, Dunboyne, Co. Meath, Ireland.
  • Makkonen J; Biosafe - Biological Safety Solutions Ltd, Microkatu 1M, Kuopio, Finland.
  • Blande D; Biosafe - Biological Safety Solutions Ltd, Microkatu 1M, Kuopio, Finland.
  • Moran C; Regulatory Affairs Department, Alltech SARL, Vire, France.
Data Brief ; 43: 108446, 2022 Aug.
Article en En | MEDLINE | ID: mdl-35864877
ABSTRACT
The genome sequence data for the pickled cucumbers isolate, Pediococcus pentosaceus IMI 507025, is reported. The raw reads and analysed genome reads were deposited at NCBI under Bioproject with the accession number PRJNA814992. The number of contigs before and after trimming were 17 and 12 contigs, respectively. The total size of the genome was 1,795,439 bp containing 1,811 total genes, of which 1,751 were coding sequences. IMI 507025 identity was determined via average nucleotide identity (ANI), obtaining an identity value of 99.5994% between IMI 507025 and the type strain P. pentosaceus ATCC 33316, identifying the strain as P. pentosaceus. Screening for the antimicrobial resistance (AMR) and virulence genes in the genome of IMI 507025 showed no hits, confirming the safety of the tested strain. Presence of plasmids was not found.
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Texto completo: 1 Banco de datos: MEDLINE Idioma: En Revista: Data Brief Año: 2022 Tipo del documento: Article País de afiliación: Irlanda

Texto completo: 1 Banco de datos: MEDLINE Idioma: En Revista: Data Brief Año: 2022 Tipo del documento: Article País de afiliación: Irlanda