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Ultrafast prediction of somatic structural variations by filtering out reads matched to pan-genome k-mer sets.
Sohn, Jang-Il; Choi, Min-Hak; Yi, Dohun; Menon, Vipin A; Kim, Yeon Jeong; Lee, Junehawk; Park, Jung Woo; Kyung, Sungkyu; Shin, Seung-Ho; Na, Byunggook; Joung, Je-Gun; Ju, Young Seok; Yeom, Min Sun; Koh, Youngil; Yoon, Sung-Soo; Baek, Daehyun; Kim, Tae-Min; Nam, Jin-Wu.
Afiliación
  • Sohn JI; Department of Life Science, Hanyang University, Seoul, Republic of Korea.
  • Choi MH; Research Institute for Convergence of Basic Sciences, Hanyang University, Seoul, Republic of Korea.
  • Yi D; Department of Life Science, Hanyang University, Seoul, Republic of Korea.
  • Menon VA; Department of Life Science, Hanyang University, Seoul, Republic of Korea.
  • Kim YJ; Department of Life Science, Hanyang University, Seoul, Republic of Korea.
  • Lee J; Samsung Genome Institute, Samsung Medical Center, Seoul, Republic of Korea.
  • Park JW; Center for Supercomputing Applications, Division of National Supercomputing, Korea Institute of Science and Technology Information, Daejeon, Republic of Korea.
  • Kyung S; Center for Supercomputing Applications, Division of National Supercomputing, Korea Institute of Science and Technology Information, Daejeon, Republic of Korea.
  • Shin SH; GENINUS Inc., Seoul, Republic of Korea.
  • Na B; GENINUS Inc., Seoul, Republic of Korea.
  • Joung JG; Department of Electrical and Computer Engineering, Seoul National University, Seoul, Republic of Korea.
  • Ju YS; Department of Biomedical Science, College of Life Science, CHA University, Seongnam, Republic of Korea.
  • Yeom MS; Graduate School of Medical Science and Engineering, Korea Advanced Institute of Science and Technology, Daejeon, Republic of Korea.
  • Koh Y; Biomedical Science and Engineering Interdisciplinary Program, Korea Advanced Institute of Science and Technology, Daejeon, Republic of Korea.
  • Yoon SS; Center for Supercomputing Applications, Division of National Supercomputing, Korea Institute of Science and Technology Information, Daejeon, Republic of Korea.
  • Baek D; College of Medicine, Seoul National University, Seoul, Republic of Korea.
  • Kim TM; College of Medicine, Seoul National University, Seoul, Republic of Korea.
  • Nam JW; School of Biological Sciences, Seoul National University, Seoul, Republic of Korea.
Nat Biomed Eng ; 7(7): 853-866, 2023 07.
Article en En | MEDLINE | ID: mdl-36536253
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Texto completo: 1 Banco de datos: MEDLINE Asunto principal: Secuenciación de Nucleótidos de Alto Rendimiento / Neoplasias Tipo de estudio: Prognostic_studies / Risk_factors_studies Límite: Humans Idioma: En Revista: Nat Biomed Eng Año: 2023 Tipo del documento: Article
Texto completo
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XML
PubMed Links
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Texto completo: 1 Banco de datos: MEDLINE Asunto principal: Secuenciación de Nucleótidos de Alto Rendimiento / Neoplasias Tipo de estudio: Prognostic_studies / Risk_factors_studies Límite: Humans Idioma: En Revista: Nat Biomed Eng Año: 2023 Tipo del documento: Article