AI-Enhanced Lung Cancer Prediction: A Hybrid Model's Precision Triumph.

Lung cancer is considered one of the most dangerous cancers, with a 5-year survival rate, ranking the disease among the top three deadliest cancers globally. Effectively combating lung cancer requires early detection for timely targeted interventions. However, ensuring early detection poses a major challenge, giving rise to innovative approaches. The emergence of artificial intelligence offers revolutionary solutions for predicting cancer. While marking a significant healthcare shift, the imperative to enhance artificial intelligence models remains a focus, particularly in precision medicine. This study introduces a hybrid deep learning model, incorporating Convolutional Neural Networks (CNN) and Bidirectional Long Short-Term Memory Networks (BiLSTM), designed for lung cancer detection from patients' medical notes. Comparative analysis with the MIMIC IV dataset reveals the model's superiority, achieving an MCC of 96.2% with an Accuracy of 98.1%, and outperforming LSTM and BioBERT with an MCC of 93.5 %, an accuracy of 97.0% and MCC of 95.5 with an accuracy of 98.0% respectively. Another comprehensive comparison was conducted with state-of-the-art results using the Yelp Review Polarity dataset. Remarkably, our model significantly outperforms the compared models, showcasing its superior performance and potential impact in the field. This research signifies a significant stride toward precise and early lung cancer detection, emphasizing the ongoing necessity for Artificial Intelligence model refinement in precision medicine.

Multiclass classification of breast cancer histopathology images using multilevel features of deep convolutional neural network.

Breast cancer is a common malignancy and a leading cause of cancer-related deaths in women worldwide. Its early diagnosis can significantly reduce the morbidity and mortality rates in women. To this end, histopathological diagnosis is usually followed as the gold standard approach. However, this process is tedious, labor-intensive, and may be subject to inter-reader variability. Accordingly, an automatic diagnostic system can assist to improve the quality of diagnosis. This paper presents a deep learning approach to automatically classify hematoxylin-eosin-stained breast cancer microscopy images into normal tissue, benign lesion, in situ carcinoma, and invasive carcinoma using our collected dataset. Our proposed model exploited six intermediate layers of the Xception (Extreme Inception) network to retrieve robust and abstract features from input images. First, we optimized the proposed model on the original (unnormalized) dataset using 5-fold cross-validation. Then, we investigated its performance on four normalized datasets resulting from Reinhard, Ruifrok, Macenko, and Vahadane stain normalization. For original images, our proposed framework yielded an accuracy of 98% along with a kappa score of 0.969. Also, it achieved an average AUC-ROC score of 0.998 as well as a mean AUC-PR value of 0.995. Specifically, for in situ carcinoma and invasive carcinoma, it offered sensitivity of 96% and 99%, respectively. For normalized images, the proposed architecture performed better for Makenko normalization compared to the other three techniques. In this case, the proposed model achieved an accuracy of 97.79% together with a kappa score of 0.965. Also, it attained an average AUC-ROC score of 0.997 and a mean AUC-PR value of 0.991. Especially, for in situ carcinoma and invasive carcinoma, it offered sensitivity of 96% and 99%, respectively. These results demonstrate that our proposed model outperformed the baseline AlexNet as well as state-of-the-art VGG16, VGG19, Inception-v3, and Xception models with their default settings. Furthermore, it can be inferred that although stain normalization techniques offered competitive performance, they could not surpass the results of the original dataset.

A Fair Performance Comparison between Complex-Valued and Real-Valued Neural Networks for Disease Detection.

Our aim is to contribute to the classification of anomalous patterns in biosignals using this novel approach. We specifically focus on melanoma and heart murmurs. We use a comparative study of two convolution networks in the Complex and Real numerical domains. The idea is to obtain a powerful approach for building portable systems for early disease detection. Two similar algorithmic structures were chosen so that there is no bias determined by the number of parameters to train. Three clinical data sets, ISIC2017, PH2, and Pascal, were used to carry out the experiments. Mean comparison hypothesis tests were performed to ensure statistical objectivity in the conclusions. In all cases, complex-valued networks presented a superior performance for the Precision, Recall, F1 Score, Accuracy, and Specificity metrics in the detection of associated anomalies. The best complex number-based classifier obtained in the Receiving Operating Characteristic (ROC) space presents a Euclidean distance of 0.26127 with respect to the ideal classifier, as opposed to the best real number-based classifier, whose Euclidean distance to the ideal is 0.36022 for the same task of melanoma detection. The 27.46% superiority in this metric, as in the others reported in this work, suggests that complex-valued networks have a greater ability to extract features for more efficient discrimination in the dataset.

An integrated framework for breast mass classification and diagnosis using stacked ensemble of residual neural networks.

A computer-aided diagnosis (CAD) system requires automated stages of tumor detection, segmentation, and classification that are integrated sequentially into one framework to assist the radiologists with a final diagnosis decision. In this paper, we introduce the final step of breast mass classification and diagnosis using a stacked ensemble of residual neural network (ResNet) models (i.e. ResNet50V2, ResNet101V2, and ResNet152V2). The work presents the task of classifying the detected and segmented breast masses into malignant or benign, and diagnosing the Breast Imaging Reporting and Data System (BI-RADS) assessment category with a score from 2 to 6 and the shape as oval, round, lobulated, or irregular. The proposed methodology was evaluated on two publicly available datasets, the Curated Breast Imaging Subset of Digital Database for Screening Mammography (CBIS-DDSM) and INbreast, and additionally on a private dataset. Comparative experiments were conducted on the individual models and an average ensemble of models with an XGBoost classifier. Qualitative and quantitative results show that the proposed model achieved better performance for (1) Pathology classification with an accuracy of 95.13%, 99.20%, and 95.88%; (2) BI-RADS category classification with an accuracy of 85.38%, 99%, and 96.08% respectively on CBIS-DDSM, INbreast, and the private dataset; and (3) shape classification with 90.02% on the CBIS-DDSM dataset. Our results demonstrate that our proposed integrated framework could benefit from all automated stages to outperform the latest deep learning methodologies.

Early detection and classification of abnormality in prior mammograms using image-to-image translation and YOLO techniques.

BACKGROUND AND OBJECTIVE: Computer-aided-detection (CAD) systems have been developed to assist radiologists on finding suspicious lesions in mammogram. Deep Learning technology have recently succeeded to increase the chance of recognizing abnormality at an early stage in order to avoid unnecessary biopsies and decrease the mortality rate. In this study, we investigated the effectiveness of an end-to-end fusion model based on You-Only-Look-Once (YOLO) architecture, to simultaneously detect and classify suspicious breast lesions on digital mammograms. Four categories of cases were included: Mass, Calcification, Architectural Distortions, and Normal from a private digital mammographic database including 413 cases. For all cases, Prior mammograms (typically scanned 1 year before) were all reported as Normal, while Current mammograms were diagnosed as cancerous (confirmed by biopsies) or healthy. METHODS: We propose to apply the YOLO-based fusion model to the Current mammograms for breast lesions detection and classification. Then apply the same model retrospectively to synthetic mammograms for an early cancer prediction, where the synthetic mammograms were generated from the Prior mammograms by using the image-to-image translation models, CycleGAN and Pix2Pix. RESULTS: Evaluation results showed that our methodology could significantly detect and classify breast lesions on Current mammograms with a highest rate of 93% ± 0.118 for Mass lesions, 88% ± 0.09 for Calcification lesions, and 95% ± 0.06 for Architectural Distortion lesions. In addition, we reported evaluation results on Prior mammograms with a highest rate of 36% ± 0.01 for Mass lesions, 14% ± 0.01 for Calcification lesions, and 50% ± 0.02 for Architectural Distortion lesions. Normal mammograms were accordingly classified with an accuracy rate of 92% ± 0.09 and 90% ± 0.06 respectively on Current and Prior exams. CONCLUSIONS: Our proposed framework was first developed to help detecting and identifying suspicious breast lesions in X-ray mammograms on their Current screening. The work was also suggested to reduce the temporal changes between pairs of Prior and follow-up screenings for early predicting the location and type of abnormalities in Prior mammogram screening. The paper presented a CAD method to assist doctors and experts to identify the risk of breast cancer presence. Overall, the proposed CAD method incorporates the advances of image processing, deep learning and image-to-image translation for a biomedical application.

Connected-UNets: a deep learning architecture for breast mass segmentation.

Breast cancer analysis implies that radiologists inspect mammograms to detect suspicious breast lesions and identify mass tumors. Artificial intelligence techniques offer automatic systems for breast mass segmentation to assist radiologists in their diagnosis. With the rapid development of deep learning and its application to medical imaging challenges, UNet and its variations is one of the state-of-the-art models for medical image segmentation that showed promising performance on mammography. In this paper, we propose an architecture, called Connected-UNets, which connects two UNets using additional modified skip connections. We integrate Atrous Spatial Pyramid Pooling (ASPP) in the two standard UNets to emphasize the contextual information within the encoder-decoder network architecture. We also apply the proposed architecture on the Attention UNet (AUNet) and the Residual UNet (ResUNet). We evaluated the proposed architectures on two publically available datasets, the Curated Breast Imaging Subset of Digital Database for Screening Mammography (CBIS-DDSM) and INbreast, and additionally on a private dataset. Experiments were also conducted using additional synthetic data using the cycle-consistent Generative Adversarial Network (CycleGAN) model between two unpaired datasets to augment and enhance the images. Qualitative and quantitative results show that the proposed architecture can achieve better automatic mass segmentation with a high Dice score of 89.52%, 95.28%, and 95.88% and Intersection over Union (IoU) score of 80.02%, 91.03%, and 92.27%, respectively, on CBIS-DDSM, INbreast, and the private dataset.

Factors Influencing Care Pathways for Breast and Prostate Cancer in a Hospital Setting.

Breast cancer (BCa) and prostate cancer (PCa) are the most prevalent types of cancers. We aimed to understand and analyze the care pathways for BCa and PCa patients followed at a hospital setting by analyzing their different treatment lines. We evaluated the association between different treatment lines and the lifestyle and demographic characteristics of these patients. Two datasets were created using the electronic health records (EHRs) and information collected through semi-structured one-on-one interviews. Statistical analysis was performed to examine which variable had an impact on the treatment each patient followed. In total, 83 patients participated in the study that ran between January and November 2018 in Beacon Hospital. Results show that chemotherapy cycles indicate if a patient would have other treatments, i.e., patients who have targeted therapy (25/46) have more chemotherapy cycles (95% CI 4.66-9.52, p = 0.012), the same is observed with endocrine therapy (95% CI 4.77-13.59, p = 0.044). Patients who had bisphosphonate (11/46), an indication of bone metastasis, had more chemotherapy cycles (95% CI 5.19-6.60, p = 0.012). PCa patients with tall height (95% CI 176.70-183.85, p = 0.005), heavier (95% CI 85.80-99.57, p < 0.001), and a BMI above 25 (95% CI 1.85-2.62, p = 0.017) had chemotherapy compared to patients who were shorter, lighter and with BMI less than 25. Initial prostate-specific antigen level (PSA level) indicated if a patient would be treated with bisphosphonate or not (95% CI 45.51-96.14, p = 0.002). Lifestyle variables such as diet (95% CI 1.46-1.85, p = 0.016), and exercise (95% CI 1.20-1.96, p = 0.029) indicated that healthier and active BCa patients had undergone surgeries. Our findings show that chemotherapy cycles and lifestyle for BCa, and tallness and weight for PCa may indicate the rest of treatment plan for these patients. Understanding factors that influence care pathways allow a more person-centered care approach and the redesign of care processes.

Breast Cancer Histopathology Image Classification Using an Ensemble of Deep Learning Models.

Breast cancer is one of the major public health issues and is considered a leading cause of cancer-related deaths among women worldwide. Its early diagnosis can effectively help in increasing the chances of survival rate. To this end, biopsy is usually followed as a gold standard approach in which tissues are collected for microscopic analysis. However, the histopathological analysis of breast cancer is non-trivial, labor-intensive, and may lead to a high degree of disagreement among pathologists. Therefore, an automatic diagnostic system could assist pathologists to improve the effectiveness of diagnostic processes. This paper presents an ensemble deep learning approach for the definite classification of non-carcinoma and carcinoma breast cancer histopathology images using our collected dataset. We trained four different models based on pre-trained VGG16 and VGG19 architectures. Initially, we followed 5-fold cross-validation operations on all the individual models, namely, fully-trained VGG16, fine-tuned VGG16, fully-trained VGG19, and fine-tuned VGG19 models. Then, we followed an ensemble strategy by taking the average of predicted probabilities and found that the ensemble of fine-tuned VGG16 and fine-tuned VGG19 performed competitive classification performance, especially on the carcinoma class. The ensemble of fine-tuned VGG16 and VGG19 models offered sensitivity of 97.73% for carcinoma class and overall accuracy of 95.29%. Also, it offered an F1 score of 95.29%. These experimental results demonstrated that our proposed deep learning approach is effective for the automatic classification of complex-natured histopathology images of breast cancer, more specifically for carcinoma images.

Detection of Volatile Compounds Emitted by Bacteria in Wounds Using Gas Sensors.

In this paper we analyze an experiment for the use of low-cost gas sensors intended to detect bacteria in wounds using a non-intrusive technique. Seven different genera/species of microbes tend to be present in most wound infections. Detection of these bacteria usually requires sample and laboratory testing which is costly, inconvenient and time-consuming. The validation processes for these sensors with nineteen types of microbes (1 Candida, 2 Enterococcus, 6 Staphylococcus, 1 Aeromonas, 1 Micrococcus, 2 E. coli and 6 Pseudomonas) are presented here, in which four sensors were evaluated: TGS-826 used for ammonia and amines, MQ-3 used for alcohol detection, MQ-135 for CO2 and MQ-138 for acetone detection. Validation was undertaken by studying the behavior of the sensors at different distances and gas concentrations. Preliminary results with liquid cultures of 108 CFU/mL and solid cultures of 108 CFU/cm2 of the 6 Pseudomonas aeruginosa strains revealed that the four gas sensors showed a response at a height of 5 mm. The ammonia detection response of the TGS-826 to Pseudomonas showed the highest responses for the experimental samples over the background signals, with a difference between the values ​​of up to 60 units in the solid samples and the most consistent and constant values. This could suggest that this sensor is a good detector of Pseudomonas aeruginosa, and the recording made of its values ​​could be indicative of the detection of this species. All the species revealed similar CO2 emission and a high response rate with acetone for Micrococcus, Aeromonas and Staphylococcus.

Development and Evaluation of a Telematics Platform for Monitoring of Patients in Ambulatory Major Surgery.

BACKGROUND: Ambulatory surgical procedures (ambulatory major surgery [AMS]), to which many people turn, do not require hospital admission. Patients may continue with their recovery from home on the same day they had surgery. OBJECTIVE: The main purpose of this article is to provide a technological solution that may enable nurses to control the evolution of a large number of patients in real time. METHODS: Java and Microsoft Band 2 SDK were used to program the mobile application (app), in contrast, Java, Hibernate, JSP, and Struts2 were used for the web app. The World Health Organization Quality Of Life (WHOQOL) and the System Usability Scale (SUS) questionnaires were applied for assessment purposes. IBM SPSS Statistics Data Editor was used for statistical analysis. Each test lasted 2 weeks, and the test itself involved completing the questionnaire about the patient's health using the mobile app. The average age of the individuals who took part in the study was 42.30 years, with a standard deviation of 17.63 years. RESULTS: The tests involved in this system were conducted at the Ambulatory Major Surgery Unit in the Basurto Hospital, Basque Country, Spain on 20 participants with an average of 42.30 years and a standard deviation of 17.63 years. The application obtained a good score on the SUS ( \documentclass{aastex}\usepackage{amsbsy}\usepackage{amsfonts}\usepackage{amssymb}\usepackage{bm}\usepackage{mathrsfs}\usepackage{pifont}\usepackage{stmaryrd}\usepackage{textcomp}\usepackage{portland, xspace}\usepackage{amsmath, amsxtra}\usepackage{upgreek}\pagestyle{empty}\DeclareMathSizes{10}{9}{7}{6}\begin{document} $$\overline{X}$$ \end{document} = 89.87 of 100, σ = 9.14). Using the WHOQOL questionnaire, the results were found better in the case of the patients' group than in the control group. CONCLUSION: Using a developed multiplatform mobile app, patients noted an improvement in the care provided in the case of day surgery. The web platform accessed by nurses to make consultations has been integrated into the app service provider, while the bracelet sends the data to the app which receives it and then sends it on to the database. Healthcare staff then check patients' condition.

Segmentation of skin lesions in dermoscopy images using fuzzy classification of pixels and histogram thresholding.

BACKGROUND AND OBJECTIVE: To ensure proper functioning of a Computer Aided Diagnosis (CAD) system for melanoma detection in dermoscopy images, it is important to accurately detect the border of the lesion. This paper proposes a method developed by the authors to address this problem. METHODS: The algorithm for segmentation of skin lesions in dermoscopy images is based on fuzzy classification of pixels and subsequent histogram thresholding. RESULTS: This method participated in the 2016 and 2017 ISBI (International Symposium on Biomedical Imaging) Challenges, hosted by the ISIC (International Skin Imaging Collaboration). It was tested against two public databases containing 379 and 600 images respectively, and compared using the same defined metrics (Accuracy, Dice Coefficient, Jaccard Index, Sensitivity and Specificity) with the rest of participating state-of-the-art work, obtaining good results: (0.934, 0.869, 0.791, 0.870 and 0.978) and (0.884, 0.760, 0.665, 0.869 and 0.923) respectively, ranking 9th and 15th out of a total of 21 and 28 participants respectively using the Jaccard Index (which was the indicator used as a basis for ranking) and the 1st in the 2017 Challenge using the Sensitivity. CONCLUSION: The method has been proven to be robust and reliable. It's main contribution is the very design of the algorithm, highly innovative, which could also be used to deal with other segmentation problems of a similar nature.

Automatized colon polyp segmentation via contour region analysis.

The increasing use of colorectal cancer screening programs has contributed to the growing number of colonoscopies performed by health centers. Hence, in recent years there has been a tendency to develop medical diagnosis support tools in order to assist specialists. This research has designed an automatized polyp detection system that allows a reduction in the rate of missed polyps that can lead to interval cancer; one of the main risks existing in colonoscopy. A characterization has therefore been made of the shape, color and curvature of edges and their regions, enabling the segmentation of polyps present in colonoscopy images. A 90.53% polyp detection rate has been achieved using the designed system, and 76.29% and 71.57% segmentation quality for the Annotated Area Covered and Dice Coefficient indicators respectively. This system aims to offer assistance with medical diagnosis that has a positive impact on patient health.

Activating Technology for Connected Health in Cancer: Protocol for a Research and Training Program.

BACKGROUND: As cancer survival rates increase, the challenge of ensuring that cancer survivors reclaim their quality of life (QoL) becomes more important. This paper outlines the research element of a research and training program that is designed to do just that. OBJECTIVE: Bridging sectors, disciplines, and geographies, it brings together eight PhD projects and students from across Europe to identify the underlying barriers, test different technology-enabled rehabilitative approaches, propose a model to optimize the patient pathways, and examine the business models that might underpin a sustainable approach to cancer survivor reintegration using technology. METHODS: The program, funded under the European Union's Horizon 2020 research and innovation program under the Marie Sklodowska-Curie grant agreement No 722012, includes deep disciplinary PhD projects, intersectoral and international secondments, interdisciplinary plenary training schools, and virtual subject-specific education modules. RESULTS: The 8 students have now been recruited and are at the early stages of their projects. CONCLUSIONS: CATCH will provide a comprehensive training and research program by embracing all key elements-technical, social, and economic sciences-required to produce researchers and project outcomes that are capable of meeting existing and future needs in cancer rehabilitation.

Harmonic to noise ratio improvement in oesophageal speech.

BACKGROUND: This manuscript presents oesophageal speech enhancement. Patients who have undergone a laryngectomy as a result of larynx cancer, that is, laryngectomees, have communication problems. Due to removal of the larynx, oesophageal speech has extremely low intelligibility. OBJECTIVE: Thus, it is necessary to process acoustical parameters, such as Harmonic to Noise Ratio (HNR) in order to increase intelligibility. METHODS: The research focused on oesophageal Spanish /a/ phoneme improvement. In order to enhance oesophageal speech two techniques were applied: Kalman filtering and an algorithm which stabilizes the vocal tract poles. Speech enhancement was measured using the MDVP tool. The oesophageal voice database was compiled with the help of the local association of laryngectomees. RESULTS: The results show an average improvement of 4.2 dB in the HNR. Statistically, differences on average between the original and processed voices, (p < 0.001) for HNR parameter were proven to be significant and we therefore conclude that voice quality was improved due to evidence of a higher HNR on average. CONCLUSIONS: As a conclusion, the study confirms oesophageal voice enhancement since speech parameters are closer to the normal average range. Subjectively, the oesophageal breathing noise is reduced substantially, as is reflected in the MOS test.