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1.
Nat Commun ; 13(1): 6488, 2022 10 30.
Artículo en Inglés | MEDLINE | ID: mdl-36310176

RESUMEN

α-Amanitin is a bicyclic octapeptide composed of a macrolactam with a tryptathionine cross-link forming a handle. Previously, the occurrence of isomers of amanitin, termed atropisomers has been postulated. Although the total synthesis of α-amanitin has been accomplished this aspect still remains unsolved. We perform the synthesis of amanitin analogs, accompanied by in-depth spectroscopic, crystallographic and molecular dynamics studies. The data unambiguously confirms the synthesis of two amatoxin-type isomers, for which we propose the term ansamers. The natural structure of the P-ansamer can be ansa-selectively synthesized using an optimized synthetic strategy. We believe that the here described terminology does also have implications for many other peptide structures, e.g. norbornapeptides, lasso peptides, tryptorubins and others, and helps to unambiguously describe conformational isomerism of cyclic peptides.


Asunto(s)
Alfa-Amanitina , Péptidos Cíclicos , Alfa-Amanitina/química , Amanitinas/química , Isomerismo , Péptidos
2.
Chemistry ; 23(29): 7009-7023, 2017 May 23.
Artículo en Inglés | MEDLINE | ID: mdl-28094884

RESUMEN

Deprotonation of ligand-appended alkoxyl groups in mononuclear copper(II) complexes of N,O ligands L1 and L2 , gave dinuclear complexes sharing symmetrical Cu2 O2 cores. Molecular structures of these mono- and binuclear complexes have been characterized by XRD, and their electronic structures by UV/Vis, 1 H NMR, EPR and DFT; moreover, catalytic performance as models of catechol oxidase was studied. The binuclear complexes with anti-ferromagnetically coupled copper(II) centers are moderately active in quinone formation from 3,5-di-tert-butyl-catechol under the established conditions of oxygen saturation, but are strongly activated when additional dioxygen is administered during catalytic turnover. This unforeseen and unprecedented effect is attributed to increased maximum reaction rates vmax , whereas the substrate affinity KM remains unaffected. Oxygen administration is capable of (partially) removing limitations to turnover caused by product inhibition. Because product inhibition is generally accepted to be a major limitation of catechol oxidase models, we think that our observations will be applicable more widely.


Asunto(s)
Materiales Biocompatibles/química , Catecol Oxidasa/química , Complejos de Coordinación/química , Cobre/química , Materiales Biocompatibles/metabolismo , Catálisis , Catecol Oxidasa/metabolismo , Complejos de Coordinación/metabolismo , Cristalografía por Rayos X , Espectroscopía de Resonancia por Spin del Electrón , Cinética , Espectroscopía de Resonancia Magnética , Conformación Molecular , Oxígeno/química , Oxígeno/metabolismo , Espectrofotometría
3.
Nat Commun ; 6: 10037, 2015 Nov 27.
Artículo en Inglés | MEDLINE | ID: mdl-26612781

RESUMEN

Aluminum chalcogenides are mostly encountered in the form of bulk aluminum oxides that are structurally diverse but typically consist of networks with high lattice energy in which the chalcogen atoms bridge the metal centres. This makes their molecular congeners difficult to synthesize because of a pronounced tendency for oligomerization. Here we describe the isolation of the monotopic aluminum chalcogenide (L(Dip)N)AlTe(L(Et))2 (L(Dip)=1,3-(2,6-diisopropylphenyl)-imidazolin-2-imine, L(Et)=1,3-diethyl-4,5-dimethyl-imidazolin-2-ylidene). Unique features of (L(Dip)N)AlTe(L(Et))2 are the terminal position of the tellurium atom, the shortest aluminum-tellurium distance hitherto reported for a molecular complex and the highest bond order reported for an interaction between these elements, to the best of our knowledge. At elevated temperature (L(Dip)N)AlTe(L(Et))2 equilibrates with dimeric {(L(Dip)N)AlTe(L(Et))}2 in which the chalcogen atoms assume their common role as bridges between the metal centres. These findings demonstrate that (L(Dip)N)AlTe(L(Et))2 comprises the elusive Al=Te double bond in the form of an N-heterocyclic carbene-stabilized species.

4.
J Am Chem Soc ; 135(41): 15617-26, 2013 Oct 16.
Artículo en Inglés | MEDLINE | ID: mdl-24053603

RESUMEN

The first [ECE]Ni(II) pincer complexes with E = Si(II) and E = Ge(II) metallylene donor arms were synthesized via C-X (X = H, Br) oxidative addition, starting from the corresponding [EC(X)E] ligands. These novel complexes were fully characterized (NMR, MS, and XRD) and used as catalyst for Ni-catalyzed Sonogashira reactions. These catalysts allowed detailed information on the elementary steps of this catalytic reaction (transmetalation → oxidative addition → reductive elimination), resulting in the isolation and characterization of an unexpected intermediate in the transmetalation step. This complex, {[ECE]Ni acetylide → CuBr} contains both nickel and copper, with the copper bound to the alkyne π-system. Consistent with these unusual structural features, DFT calculations of the {[ECE]Ni acetylide → CuBr} intermediates revealed an unusual E-Cu-Ni three-center-two-electron bonding scheme. The results reveal a general reaction mechanism for the Ni-based Sonogashira coupling and broaden the application of metallylenes as strong σ-donor ligands for catalytic transformations.

5.
Bioorg Med Chem ; 21(12): 3582-9, 2013 Jun 15.
Artículo en Inglés | MEDLINE | ID: mdl-23548628

RESUMEN

The proximicins A-C are naturally occurring cytotoxic γ-peptides that contain the unique 4-amino-furan-carboxylic acid. In contrast to the structurally related cytotoxic natural DNA binder netropsin and distamycin, both exhibiting as core building block N-methyl-4-amino-pyrrol-carboxylic acid, no DNA binding was observed for the procimicins. X-ray analysis of crystals of a protected 4-amino-furan-2-carboxylic acid dipeptide revealed a stretched conformation. In contrast, for netropsin and distamycin, sickle-shaped crystal conformations were observed. DFT-calculations elegantly confirm these conformational arrangements. The most stable conformers of the proximicins are linear whereas sickle-shaped conformations are less stable, having higher Gibbs energies. For netropsin, distamycin and the netropsin-proximicin-hybrid a sickle shaped conformation appears energetically favored. The reported results are consistent with the observations that the proximicins A-C do not bind to the DNA and have a different mode of action concerning their cytotoxic activity with respect to netropsin and distamycin.


Asunto(s)
Antibacterianos/química , Péptidos/química , Teoría Cuántica , Cristalografía por Rayos X , Modelos Moleculares , Netropsina/análogos & derivados , Netropsina/química , Conformación Proteica
6.
J Am Chem Soc ; 135(17): 6703-13, 2013 May 01.
Artículo en Inglés | MEDLINE | ID: mdl-23570308

RESUMEN

The first electron-rich N-heterocyclic silylene (NHSi)-iron(0) complexes are reported. The synthesis of the starting complex is accomplished by reaction of the electron-rich Fe(0) precursor [(dmpe)2Fe(PMe3)] 1 (dmpe =1,2-bis(dimethylphosphino)ethane) with the N-heterocyclic chlorosilylene LSiCl (L = PhC(N(t)Bu)2) 2 to give, via Me3P elimination, the corresponding iron complex [(dmpe)2Fe(←:Si(Cl)L)] 3. Reaction of in situ generated 3 with MeLi afforded [(dmpe)2Fe(←:Si(Me)L)] 4 under salt metathesis reaction, while its reaction with Li[BHEt3] yielded [(dmpe)2Fe(←:Si(H)L)] 5, a rare example of an isolable Si(II) hydride complex and the first such example for iron. All complexes were fully characterized by spectroscopic means and by single-crystal X-ray diffraction analyses. DFT calculations further characterizing the bonding situation between the Si(II) and Fe(0) centers were also carried out, whereby multiple bonding character is detected in all cases (Wiberg Bond Index >1). For the first time, the catalytic activity of a Si(II) hydride complex was investigated. Complex 5 was used as a precatalyst for the hydrosilylation of a variety of ketones in the presence of (EtO)3SiH as a hydridosilane source. In most cases excellent conversions to the corresponding alcohols were obtained after workup. The reaction pathway presumably involves a ketone-assisted 1,2-hydride transfer from the Si(II) to Fe(0) center, as a key elementary step, resulting in a betaine-like silyliumylidene intermediate. The appearance of the latter intermediate is supported by DFT calculations, and a mechanistic proposal for the catalytic process is presented.

7.
Chem Asian J ; 6(6): 1613-23, 2011 Jun 06.
Artículo en Inglés | MEDLINE | ID: mdl-21598400

RESUMEN

Herein, the iron-catalyzed reduction of a variety of alkynes with silanes as a reductant has been examined. With a straightforward catalyst system composed of diiron nonacarbonyl and tributyl phosphane, excellent yields and chemoselectivities (>99%) were obtained for the formation of the corresponding alkenes. After studying the reaction conditions, and the scope and limitations of the reaction, several attempts were undertaken to shed light on the reaction mechanism.

8.
Dalton Trans ; (24): 4689-94, 2009 Jun 28.
Artículo en Inglés | MEDLINE | ID: mdl-19513477

RESUMEN

Molybdenum hexacarbonyl reacts with 1,2-bis[(2,6-diisopropylphenyl)imino]acenaphthene (, dpp-BIAN) and 1,2-bis[(trimethylsilyl)imino]acenaphthene (, tms-BIAN) in toluene to produce (dpp-BIAN)Mo(CO)(4) () and (tms-BIAN)Mo(CO)(4) (), respectively. The reaction of [CpNi(CO)](2) with yields (dpp-BIAN)NiCp (). Metathesis between Li(2)(tms-BIAN) and NiCl(2)(dppe) affords the Ni(0) complex (tms-BIAN)Ni(dppe) (). The diamagnetic compounds , and have been characterized by (1)H, (29)Si and (31)P NMR spectroscopy, IR spectroscopy and elemental analysis. The ESR spectrum of the paramagnetic compound indicates the presence of Ni(i) coordinated by Cp and a neutral dpp-BIAN ligand. The molecular structures of have been determined by single-crystal X-ray analysis.

9.
J Antibiot (Tokyo) ; 62(2): 99-104, 2009 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-19198633

RESUMEN

Caboxamycin, a new benzoxazole antibiotic, was detected by HPLC-diode array screening in extracts of the marine strain Streptomyces sp. NTK 937, which was isolated from deep-sea sediment collected in the Canary Basin. The structure of caboxamycin was determined by mass spectrometry, NMR experiments and X-ray analysis. It showed inhibitory activity against Gram-positive bacteria, selected human tumor cell lines and the enzyme phosphodiesterase.


Asunto(s)
Antibacterianos/biosíntesis , Antibacterianos/farmacología , Benzoxazoles/farmacología , Streptomyces/metabolismo , Antibacterianos/aislamiento & purificación , Antibióticos Antineoplásicos/farmacología , Benzoxazoles/aislamiento & purificación , Benzoxazoles/metabolismo , Línea Celular Tumoral , Supervivencia Celular , Evaluación Preclínica de Medicamentos , Ensayos de Selección de Medicamentos Antitumorales , Fermentación , Bacterias Grampositivas/efectos de los fármacos , Humanos , Espectroscopía de Resonancia Magnética , Pruebas de Sensibilidad Microbiana , Modelos Moleculares , Conformación Molecular , Agua de Mar/microbiología , Espectrometría de Masa por Ionización de Electrospray , Espectrofotometría Infrarroja , Espectrofotometría Ultravioleta , Streptomyces/química , Microbiología del Agua
10.
J Antibiot (Tokyo) ; 61(6): 356-64, 2008 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-18667783

RESUMEN

Bendigoles A approximately C are the first secondary metabolites to be isolated from a member of the actinomycete genus Gordonia. They were detected in a culture filtrate extract of Gordonia australis Acta 2299 by HPLC-diode array analysis and characterized as new steroids by mass spectrometry and NMR experiments. Bendigole C show binding affinity to the human progesterone and A approximately C to androgen receptor but are inactive at mineralocorticoid and estrogen receptors. In in vitro transactivation studies bendigoles A and C showed moderate and weak androgenic activities.


Asunto(s)
Andrógenos , Andrógenos/biosíntesis , Bacteria Gordonia/metabolismo , Hidroxiesteroides/metabolismo , Andrógenos/química , Andrógenos/aislamiento & purificación , Andrógenos/farmacología , Cromatografía Líquida de Alta Presión , Cristalografía por Rayos X , Fermentación , Bacteria Gordonia/clasificación , Bacteria Gordonia/crecimiento & desarrollo , Humanos , Hidroxiesteroides/química , Hidroxiesteroides/aislamiento & purificación , Hidroxiesteroides/farmacología , Espectroscopía de Resonancia Magnética , Espectrometría de Masas , Estructura Molecular , Progesterona/metabolismo , Receptores Androgénicos/metabolismo , Receptores de Estrógenos/efectos de los fármacos , Receptores de Estrógenos/metabolismo , Receptores de Mineralocorticoides/efectos de los fármacos , Receptores de Mineralocorticoides/metabolismo
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