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1.
J Proteome Res ; 18(5): 2206-2220, 2019 05 03.
Artículo en Inglés | MEDLINE | ID: mdl-30958009

RESUMEN

The genus Trimeresurus comprises a group of venomous pitvipers endemic to Southeast Asia and the Pacific Islands. Of these, Trimeresurus insularis, the White-lipped Island Pitviper, is a nocturnal, arboreal species that occurs on nearly every major island of the Lesser Sunda archipelago. In the current study, venom phenotypic characteristics of T. insularis sampled from eight Lesser Sunda Islands (Flores, Lembata, Lombok, Pantar, Sumba, Sumbawa, Timor, and Wetar) were evaluated via SDS-PAGE, enzymatic activity assays, fibrinogenolytic assays, gelatin zymography, and RP-HPLC, and the Sumbawa sample was characterized by venomic analysis. For additional comparative analyses, venoms were also examined from several species in the Trimeresurus complex, including T. borneensis, T. gramineus, T. puniceus, T. purpureomaculatus, T. stejnegeri, and Protobothrops flavoviridis. Despite the geographical isolation, T. insularis venoms from all eight islands demonstrated remarkable similarities in gel electrophoretic profiles and RP-HPLC patterns, and all populations had protein bands in the mass ranges of phosphodiesterases (PDE), l-amino acid oxidases (LAAO), P-III snake venom metalloproteinases (SVMP), serine proteases, cysteine-rich secretory proteins (CRISP), phospholipases A2 (PLA2), and C-type lectins. An exception was observed in the Lombok sample, which lacked protein bands in the mass range of serine protease and CRISP. Venomic analysis of the Sumbawa venom also identified these protein families, in addition to several proteins of lesser abundance (<1%), including glutaminyl cyclase, aminopeptidase, PLA2 inhibitor, phospholipase B, cobra venom factor, 5'-nucleotidase, vascular endothelial growth factor, and hyaluronidase. All T. insularis venoms exhibited similarities in thrombin-like and PDE activities, while significant differences were observed for LAAO, SVMP, and kallikrein-like activities, though these differences were only observed for a few islands. Slight but noticeable differences were also observed with fibrinogen and gelatin digestion activities. Trimeresurus insularis venoms exhibited overall similarity to the other Trimeresurus complex species examined, with the exception of P. flavoviridis venom, which showed the greatest overall differentiation. Western blot analysis revealed that all major T. insularis venom proteins were recognized by Green Pitviper ( T. albolabris) antivenom, and reactivity was also seen with most venom proteins of the other Trimeresurus species, but incomplete antivenom-venom recognition was observed against P. flavoviridis venom proteins. These results demonstrate significant conservation in the venom composition of T. insularis across the Lesser Sunda archipelago relative to the other Trimeresurus species examined.


Asunto(s)
Venenos de Crotálidos/química , L-Aminoácido Oxidasa/aislamiento & purificación , Metaloproteasas/aislamiento & purificación , Hidrolasas Diéster Fosfóricas/aislamiento & purificación , Serina Proteasas/aislamiento & purificación , Trimeresurus/metabolismo , Animales , Antivenenos/farmacología , Secuencia Conservada , Venenos de Crotálidos/aislamiento & purificación , Electroforesis en Gel de Poliacrilamida , Fibrinógeno/química , Gelatina/química , Expresión Génica , Indonesia , Islas , L-Aminoácido Oxidasa/antagonistas & inhibidores , L-Aminoácido Oxidasa/genética , L-Aminoácido Oxidasa/metabolismo , Lectinas Tipo C/antagonistas & inhibidores , Lectinas Tipo C/genética , Lectinas Tipo C/aislamiento & purificación , Lectinas Tipo C/metabolismo , Glicoproteínas de Membrana/antagonistas & inhibidores , Glicoproteínas de Membrana/genética , Glicoproteínas de Membrana/aislamiento & purificación , Glicoproteínas de Membrana/metabolismo , Metaloproteasas/antagonistas & inhibidores , Metaloproteasas/genética , Metaloproteasas/metabolismo , Fenotipo , Fosfolipasas A2/genética , Fosfolipasas A2/aislamiento & purificación , Fosfolipasas A2/metabolismo , Hidrolasas Diéster Fosfóricas/genética , Hidrolasas Diéster Fosfóricas/metabolismo , Filogenia , Proteolisis , Serina Proteasas/genética , Serina Proteasas/metabolismo , Trimeresurus/genética
2.
Am Nat ; 178(2): 221-40, 2011 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-21750386

RESUMEN

Because island communities are derived from mainland communities, they are often less diverse by comparison. However, reduced complexity of island communities can also present ecological opportunities. For example, amphibian diversity on Sulawesi Island is lower than it is in the Philippines, but Sulawesi supports a surprising diversity of Sulawesi fanged frogs (Limnonectes). Here we examine molecular, morphological, and geographical variation of fanged frogs from these two regions. Using genealogical concordance, morphology, and a Bayesian approach to species delimitation, we identified 13 species on Sulawesi, only four of which have been previously described. After evolutionary history is accounted for, a model with multiple body size optima in sympatric species is favored over a "random-walk" model of body size evolution. Additionally, morphological variation is higher among sympatric than nonsympatric species on Sulawesi but not in the Philippines. These findings suggest that adaptive radiation of fanged frogs on Sulawesi was driven by natural selection to infiltrate ecological niches occupied by other frog lineages in the Philippines. This supports a role of ecological opportunity in community assembly: diversification in mature communities, such as the Philippines, is limited by a dearth of unoccupied ecological niches. On Sulawesi, evolutionary novelties originated in a predictable and replicated fashion in response to opportunities presented by a depauperate ancestral community.


Asunto(s)
Biodiversidad , Evolución Biológica , Ranidae/anatomía & histología , Ranidae/genética , Animales , Tamaño Corporal , ADN Mitocondrial/genética , Ecosistema , Complejo IV de Transporte de Electrones/genética , Femenino , Genes RAG-1/genética , Especiación Genética , Indonesia , Masculino , Datos de Secuencia Molecular , Filipinas , Filogenia , ARN Ribosómico/genética , ARN Ribosómico 16S/genética , Ranidae/fisiología , Selección Genética , Análisis de Secuencia
3.
Mol Phylogenet Evol ; 57(2): 598-619, 2010 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-20601009

RESUMEN

Southeast Asia's widespread species offer unique opportunities to explore the effects of geographical barriers to dispersal on patterns of vertebrate lineage diversification. We analyzed mitochondrial gene sequences (16S rDNA) from a geographically widespread sample of 266 Southeast Asian tree frogs, including 244 individuals of Polypedates leucomystax and its close relatives. Our expectation was that lineages on island archipelagos would exhibit more substantial geographic structure, corresponding to the geological history of terrestrial connectivity in this region, compared to the Asian mainland. Contrary to predictions, we found evidence of numerous highly divergent lineages from a limited area on the Asian mainland, but fewer lineages with shallower divergences throughout oceanic islands of the Philippines and Indonesia. Surprisingly and in numerous instances, lineages in the archipelagos span distinct biogeographical provinces. Phylogeographic analyses identified four major haplotype clades; summary statistics, mismatch distributions, and Bayesian coalescent inference of demography provide support for recent range expansion, population growth, and/or admixture in the Philippine and some Sulawesi populations. We speculate that the current range of P. leucomystax in Southeast Asia is much larger now than in the recent past. Conversion of forested areas to monoculture agriculture and transportation of agricultural products between islands may have facilitated unprecedented population and range expansion in P. leucomystax throughout thousands of islands in the Philippine and Indonesian archipelagos.


Asunto(s)
Anuros/clasificación , Anuros/genética , Filogeografía , Animales , ADN Ribosómico/genética , Variación Genética/genética , Humanos , Indonesia , Filipinas
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