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1.
Commun Biol ; 5(1): 360, 2022 04 14.
Artículo en Inglés | MEDLINE | ID: mdl-35422073

RESUMEN

In this work we examine how small hydrophobic molecules such as inert gases interact with membrane proteins (MPs) at a molecular level. High pressure atmospheres of argon and krypton were used to produce noble gas derivatives of crystals of three well studied MPs (two different proton pumps and a sodium light-driven ion pump). The structures obtained using X-ray crystallography showed that the vast majority of argon and krypton binding sites were located on the outer hydrophobic surface of the MPs - a surface usually accommodating hydrophobic chains of annular lipids (which are known structural and functional determinants for MPs). In conformity with these results, supplementary in silico molecular dynamics (MD) analysis predicted even greater numbers of argon and krypton binding positions on MP surface within the bilayer. These results indicate a potential importance of such interactions, particularly as related to the phenomenon of noble gas-induced anaesthesia.


Asunto(s)
Anestésicos , Criptón , Argón/química , Argón/farmacología , Cristalografía por Rayos X , Criptón/química , Criptón/metabolismo , Lípidos
2.
Sci Adv ; 3(9): e1603187, 2017 09.
Artículo en Inglés | MEDLINE | ID: mdl-28948217

RESUMEN

Generation of an electrochemical proton gradient is the first step of cell bioenergetics. In prokaryotes, the gradient is created by outward membrane protein proton pumps. Inward plasma membrane native proton pumps are yet unknown. We describe comprehensive functional studies of the representatives of the yet noncharacterized xenorhodopsins from Nanohaloarchaea family of microbial rhodopsins. They are inward proton pumps as we demonstrate in model membrane systems, Escherichia coli cells, human embryonic kidney cells, neuroblastoma cells, and rat hippocampal neuronal cells. We also solved the structure of a xenorhodopsin from the nanohalosarchaeon Nanosalina (NsXeR) and suggest a mechanism of inward proton pumping. We demonstrate that the NsXeR is a powerful pump, which is able to elicit action potentials in rat hippocampal neuronal cells up to their maximal intrinsic firing frequency. Hence, inwardly directed proton pumps are suitable for light-induced remote control of neurons, and they are an alternative to the well-known cation-selective channelrhodopsins.


Asunto(s)
Optogenética , Bombas de Protones/metabolismo , Rodopsina/metabolismo , Archaea/metabolismo , Sitios de Unión , Línea Celular , Cromatografía Líquida de Alta Presión , Escherichia coli/metabolismo , Humanos , Concentración de Iones de Hidrógeno , Luz , Liposomas , Modelos Moleculares , Optogenética/métodos , Unión Proteica , Conformación Proteica , Protones , Retina/metabolismo , Rodopsina/química , Análisis Espectral
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