Cryptococcal meningitis in non-HIV patients in the State of Amazonas, Northern Brazil.

Cryptococcosis is a life-threatening fungal infection caused by the Cryptococcus neoformans/Cryptococcus gattii species complex. Most cases are recorded in patients suffering from HIV/AIDS (human immunodeficiency virus/acquired immunodeficiency syndrome). However, this infection also occurs in non-HIV patients with a proportion of 10-30% of all cases. The study aimed at the clinical and molecular characterization of non-HIV patients diagnosed with cryptococcosis at the Tropical Medicine Foundation (FMT-HVD) from July 2016 to June 2019. Medical records of respective patients were analyzed to describe the course of cryptococcosis in non-HIV patients. In addition, multi-locus sequence typing (MLST) was applied to identify the sequence types of the isolated Cryptococcus strains, to perform phylogenetic analysis, and to evaluate the isolates' genetic relationship to global reference strains. Antifungal susceptibility profiles to amphotericin B, fluconazole, and itraconazole were assessed by broth microdilution. From a total of 7 patients, 4 were female, the age range varied between 10 and 53 years (median of 36.3 years). Cryptococcal meningitis was the common clinical manifestation (100%). The period between onset of symptoms and confirmed diagnosis ranged from 15 to 730 days (mean value of 172.9 days), and the observed mortality was 57.1%. Of note, comorbidities of the assessed cryptococcosis patients comprised hypertension, diabetes mellitus, and intestinal tuberculosis. Genotyping applying PCR-RFLP of the URA5 gene identified all clinical isolates as C. gattii genotype VGII. Using MLST, it was possible to discriminate the sequence types ST20 (n = 4), ST5 (n = 3), and the newly identified sequence type ST560 (n = 1). The antifungals amphotericin B, fluconazole, and itraconazole showed satisfactory inhibitory activity (microdilution test) against all C. gattii VGII strains.

Airborne fungi isolated from different environments of a primary school in the city of Manaus, Amazonas, Brazil / Fungos anemófilos isolados de diferentes ambientes de uma escola primária na cidade de Manaus, Amazonas, Brasil

Introduction: Airborne fungi can cause respiratory diseases, including pulmonary mycoses. The objective of this study was to isolate and identify airborne fungi from external and internal environments at a full-day primary school in Manaus, Brazil, and ascertain the influence of seasonality on the incidence of these microorganisms. Methods: Airborne fungi were collected by exposing Sabouraud agar plates at various external and internal locations in the school. Results: A total of 2,386 fungal colonies were isolated, 1,041 in the rainy season and 1,345 during the dry season. Of these, 1,858 were identified and distributed into 34 genera. The most prevalent were Cladosporium sp. (22.6%); Aspergillus sp. (17.14%); Penicillium sp. (8.55%); Curvularia sp. (6.83%); and Drechslera sp. (5.7%). During the dry season, the most prevalent genre was Aspergillus (19.3%), while in the rainy season, Cladosporium predominated (34.6%). Conclusion: Seasonality influenced fungal incidence, especially of the genus Cladosporium, which increased significantly during the rainy season. Cladosporium can be considered a bioindicator of the rainy season in the Brazilian Amazon.

Introdução: Os fungos presentes no ar, denominados anemófilos, possuem uma ampla diversidade em locais de clima tropical e são causadores de micoses pulmonares e outras doenças do aparelho respiratório. O objetivo do estudo foi isolar e identificar os fungos do ar de uma escola de ensino fundamental de tempo integral, a partir de ambientes externos e internos, e verificar se a sazonalidade influencia a incidência desses microrganismos. Métodos: Para coleta dos fungos do ar, placas de Petri contendo Sabouraud foram expostas nos ambientes externos e internos da escola. Resultados: Foram isoladas 2.386 colônias de fungos, sendo 1.041 na estação chuvosa e 1.345 na estação seca. Foram identificados 1.858 fungos, que puderam ser distribuídos em 34 gêneros. Os gêneros mais frequentes foram Cladosporium sp. (22,6%), Aspergillus sp. (17,14%), Penicillium sp. (8,55%), Curvularia sp. (6,83%) e Drechslera sp. (5,7%). Durante o período seco, o gênero mais frequente foi o Aspergillus (19,21%), e no período chuvoso, o gênero Cladosporium (34,8%). Conclusão: A sazonalidade influenciou principalmente o gênero Cladosporium, que obteve aumento significativo na estação chuvosa, constituindo um biomarcador dessa estação.

Effects of culture filtrates of endophytic fungi obtained from Piper aduncum L. on the growth of mycobacterium tuberculosis

Substances that inhibit the growth of Mycobacterium tuberculosis could potentially be used as antibiotics. These substances could also be added to test culture media to improve the speed of tuberculosis diagnosis. The aim of this work was to investigate the influence of culture filtrates of endophytic fungi isolated from P. aduncum L. on the growth of M. tuberculosis. To achieve this objective, the following methodology was used: a) endophytic fungi were isolated from the leaves and stems of P. aduncum L.; b) the isolated fungi were submitted to submerged bioprocessing; c) culture filtrates from the bioprocess were assayed to evaluate their effect on the growth of M. tuberculosis. We isolated 315 fungal types, which represented 85 morphologies, from different parts of P. aduncum L. The bioassays were performed on 82 culture filtrates and 6 plant extracts and resulted in the detection of 1 culture filtrate that stimulated the growth of M. tuberculosis and 15 that inhibited microbial growth. None of the phytochemical extracts had an effect on the growth of M. tuberculosis. In conclusion, we observed that the endophytic fungi isolated from P. aduncum L. (Piperaceae) produced extracellular metabolites (present in the culture filtrate) that affect the growth of M. tuberculosis. These compounds have the potential to be used as antimicrobials or in the diagnosis of tuberculosis.

Micoses superficiais na cidade de Manaus, AM, entre março e novembro/2003 / Superficial mycoses in the City of Manaus/AM between March and November/2003

FUNDAMENTOS: Micoses superficiais estritas são infecções fúngicas que se localizam nas camadas superficiais da pele e seus anexos. As micoses superficiais cutâneas representadas pelas dermatofitoses e candidíases podem ultrapassar a camada córnea da pele. Na região amazônica possuem incidência elevada. OBJETIVOS: Estudar as micoses superficiais, estritas e cutâneas, diagnosticadas sob o ponto de vista epidemiológico e micológico. PACIENTES E MÉTODOS: Pacientes com suspeita clínica de micoses superficiais submetidos a exame micológico no período de março a novembro de 2003 no Laboratório de Micologia Médica/CPCS/INPA. RESULTADOS: Foram realizados 394 exames, tendo 256 apresentado diagnóstico positivo. As micoses mais incidentes foram onicomicoses (135) e pitiríase versicolor (98). Malassezia spp. (77) e Candida spp. (72) foram os agentes fúngicos mais isolados. Tinea capitis apresentou maior ocorrência nos pré-escolares (3), e onicomicoses em adultos (94). O sexo feminino foi o mais acometido (91). Todas as classes sociais foram infectadas, com predominância da C (37). CONCLUSÃO: Onicomicoses e pitiríase versicolor acometeram sobretudo adultos. A Tinea capitis ocorre principalmente, em crianças. As micoses superficiais apresentaram mais incidentes nas mulheres. Malassezia spp. e Candida spp. foram os agentes mais isolados.