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1.
Nat Struct Mol Biol ; 27(2): 202-209, 2020 02.
Artigo em Inglês | MEDLINE | ID: mdl-32042153

RESUMO

The mitochondrial membrane-bound AAA protein Bcs1 translocate substrates across the mitochondrial inner membrane without previous unfolding. One substrate of Bcs1 is the iron-sulfur protein (ISP), a subunit of the respiratory Complex III. How Bcs1 translocates ISP across the membrane is unknown. Here we report structures of mouse Bcs1 in two different conformations, representing three nucleotide states. The apo and ADP-bound structures reveal a homo-heptamer and show a large putative substrate-binding cavity accessible to the matrix space. ATP binding drives a contraction of the cavity by concerted motion of the ATPase domains, which could push substrate across the membrane. Our findings shed light on the potential mechanism of translocating folded proteins across a membrane, offer insights into the assembly process of Complex III and allow mapping of human disease-associated mutations onto the Bcs1 structure.


Assuntos
ATPases Associadas a Diversas Atividades Celulares/química , Chaperonas Moleculares/química , ATPases Associadas a Diversas Atividades Celulares/metabolismo , Difosfato de Adenosina/metabolismo , Trifosfato de Adenosina/metabolismo , Animais , Cristalografia por Raios X , Camundongos , Proteínas Mitocondriais/química , Proteínas Mitocondriais/metabolismo , Modelos Moleculares , Chaperonas Moleculares/metabolismo , Conformação Proteica , Domínios Proteicos , Dobramento de Proteína , Multimerização Proteica , Transporte Proteico
2.
Neuron ; 105(5): 882-894.e5, 2020 03 04.
Artigo em Inglês | MEDLINE | ID: mdl-31866091

RESUMO

Transient receptor potential channel subfamily A member 1 (TRPA1) is a Ca2+-permeable cation channel that serves as one of the primary sensors of environmental irritants and noxious substances. Many TRPA1 agonists are electrophiles that are recognized by TRPA1 via covalent bond modifications of specific cysteine residues located in the cytoplasmic domains. However, a mechanistic understanding of electrophile sensing by TRPA1 has been limited due to a lack of high-resolution structural information. Here, we present the cryoelectron microscopy (cryo-EM) structures of nanodisc-reconstituted ligand-free TRPA1 and TRPA1 in complex with the covalent agonists JT010 and BITC at 2.8, 2.9, and 3.1 Å, respectively. Our structural and functional studies provide the molecular basis for electrophile recognition by the extraordinarily reactive C621 in TRPA1 and mechanistic insights into electrophile-dependent conformational changes in TRPA1. This work also provides a platform for future drug development targeting TRPA1.


Assuntos
Acetamidas/metabolismo , Irritantes/metabolismo , Isotiocianatos/metabolismo , Canal de Cátion TRPA1/ultraestrutura , Tiazóis/metabolismo , Acetamidas/farmacologia , Microscopia Crioeletrônica , Cisteína/metabolismo , Células HEK293 , Humanos , Irritantes/farmacologia , Isotiocianatos/farmacologia , Modelos Moleculares , Nociceptores , Dor/metabolismo , Técnicas de Patch-Clamp , Fosfolipídeos/metabolismo , Domínios Proteicos , Estrutura Terciária de Proteína , Prurido/metabolismo , Canal de Cátion TRPA1/efeitos dos fármacos , Canal de Cátion TRPA1/metabolismo , Tiazóis/farmacologia
3.
Nat Commun ; 10(1): 3740, 2019 08 20.
Artigo em Inglês | MEDLINE | ID: mdl-31431622

RESUMO

The transient receptor potential melastatin 2 (TRPM2) channel plays a key role in redox sensation in many cell types. Channel activation requires binding of both ADP-ribose (ADPR) and Ca2+. The recently published TRPM2 structures from Danio rerio in the ligand-free and the ADPR/Ca2+-bound conditions represent the channel in closed and open states, which uncovered substantial tertiary and quaternary conformational rearrangements. However, it is unclear how these rearrangements are achieved within the tetrameric channel during channel gating. Here we report the cryo-electron microscopy structures of Danio rerio TRPM2 in the absence of ligands, in complex with Ca2+ alone, and with both ADPR and Ca2+, resolved to ~4.3 Å, ~3.8 Å, and ~4.2 Å, respectively. In contrast to the published results, our studies capture ligand-bound TRPM2 structures in two-fold symmetric intermediate states, offering a glimpse of the structural transitions that bridge the closed and open conformations.


Assuntos
Adenosina Difosfato Ribose/metabolismo , Cálcio/metabolismo , Estrutura Quaternária de Proteína , Canais de Cátion TRPM/metabolismo , Proteínas de Peixe-Zebra/metabolismo , Animais , Linhagem Celular , Microscopia Crioeletrônica , Células HEK293 , Humanos , Ativação do Canal Iônico , Técnicas de Patch-Clamp , Células Sf9 , Spodoptera , Canais de Cátion TRPM/química , Peixe-Zebra , Proteínas de Peixe-Zebra/química
4.
Nat Commun ; 10(1): 513, 2019 01 31.
Artigo em Inglês | MEDLINE | ID: mdl-30705282

RESUMO

Rix7 is an essential type II AAA-ATPase required for the formation of the large ribosomal subunit. Rix7 has been proposed to utilize the power of ATP hydrolysis to drive the removal of assembly factors from pre-60S particles, but the mechanism of release is unknown. Rix7's mammalian homolog, NVL2 has been linked to cancer and mental illness disorders, highlighting the need to understand the molecular mechanisms of this essential machine. Here we report the cryo-EM reconstruction of the tandem AAA domains of Rix7 which form an asymmetric stacked homohexameric ring. We trapped Rix7 with a polypeptide in the central channel, revealing Rix7's role as a molecular unfoldase. The structure establishes that type II AAA-ATPases lacking the aromatic-hydrophobic motif within the first AAA domain can engage a substrate throughout the entire central channel. The structure also reveals that Rix7 contains unique post-α7 insertions within both AAA domains important for Rix7 function.


Assuntos
ATPases Associadas a Diversas Atividades Celulares/metabolismo , Adenosina Trifosfatases/metabolismo , Adenosina Trifosfatases/ultraestrutura , Microscopia Crioeletrônica/métodos , Proteínas Nucleares/metabolismo , Proteínas Nucleares/ultraestrutura , Proteínas de Saccharomyces cerevisiae/metabolismo , Proteínas de Saccharomyces cerevisiae/ultraestrutura , ATPases Associadas a Diversas Atividades Celulares/ultraestrutura , RNA Ribossômico/metabolismo , RNA Ribossômico/ultraestrutura , Proteínas Ribossômicas/metabolismo , Saccharomyces cerevisiae/metabolismo
5.
Nanotechnology ; 25(39): 395701, 2014 Oct 03.
Artigo em Inglês | MEDLINE | ID: mdl-25190015

RESUMO

Chemical doping has been shown as an effective method of reducing the sheet resistance of graphene. We present the results of our investigations into doping large area chemical vapor deposition graphene using Iron (III) Chloride (FeCl(3)). It is shown that evaporating FeCl(3) can increase the carrier concentration of monolayer graphene to greater than 10(14) cm(-2) and achieve resistances as low as 72 Ω sq(-1). We also evaluate other important properties of the doped graphene such as surface cleanliness, air stability, and solvent stability. Furthermore, we compare FeCl(3) to three other common dopants: Gold (III) Chloride (AuCl(3)), Nitric Acid (HNO(3)), and TFSA ((CF(3)SO(2))(2)NH). We show that compared to these dopants, FeCl(3) can not only achieve better sheet resistance but also has other key advantages including better solvent stability.

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