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1.
Structure ; 31(7): 757-759, 2023 07 06.
Artigo em Inglês | MEDLINE | ID: mdl-37419098

RESUMO

The sulfate donor 3'-phosphoadenosine-5'-phosphosulfate (PAPS) is a near-universal component of sulfur metabolism. In a report by Zhang et al. in this issue of Structure, X-ray crystal structures of the APS kinase domains from human PAPS synthase reveal dynamic substrate recognition and a regulatory "redox switch" analogous to that previously described only in plant APS kinases.


Assuntos
Adenosina , Fosfotransferases (Aceptor do Grupo Álcool) , Plantas , Humanos , Adenosina/metabolismo , Oxirredução , Fosfotransferases (Aceptor do Grupo Álcool)/química , Plantas/enzimologia
2.
Sci Transl Med ; 14(649): eabg4132, 2022 06 15.
Artigo em Inglês | MEDLINE | ID: mdl-35704598

RESUMO

Resistance to second-generation androgen receptor (AR) antagonists such as enzalutamide is an inevitable consequence in patients with castration-resistant prostate cancer (CRPC). There are no effective therapeutic options for this recurrent disease. The expression of truncated AR variant 7 (AR-V7) has been suggested to be one mechanism of resistance; however, its low frequency in patients with CRPC does not explain the almost universal acquisition of resistance. We noted that the ability of AR to translocate to nucleus in an enzalutamide-rich environment opens up the possibility of a posttranslational modification in AR that is refractory to enzalutamide binding. Chemical proteomics in enzalutamide-resistant CRPC cells revealed acetylation at Lys609 in the zinc finger DNA binding domain of AR (acK609-AR) that not only allowed AR translocation but also galvanized a distinct global transcription program, conferring enzalutamide insensitivity. Mechanistically, acK609-AR was recruited to the AR and ACK1/TNK2 enhancers, up-regulating their transcription. ACK1 kinase-mediated AR Y267 phosphorylation was a prerequisite for AR K609 acetylation, which spawned positive feedback loops at both the transcriptional and posttranslational level that regenerated and sustained high AR and ACK1 expression. Consistent with these findings, oral and subcutaneous treatment with ACK1 small-molecule inhibitor, (R)-9b, not only curbed AR Y267 phosphorylation and subsequent K609 acetylation but also compromised enzalutamide-resistant CRPC xenograft tumor growth in mice. Overall, these data uncover chronological modification events in AR that allows prostate cancer to evolve through progressive stages to reach the resilient recurrent CRPC stage, opening up a therapeutic vulnerability.


Assuntos
Neoplasias de Próstata Resistentes à Castração , Receptores Androgênicos , Antagonistas de Receptores de Andrógenos/farmacologia , Antagonistas de Receptores de Andrógenos/uso terapêutico , Animais , Linhagem Celular Tumoral , Resistencia a Medicamentos Antineoplásicos , Humanos , Masculino , Camundongos , Nitrilas , Fosforilação , Neoplasias de Próstata Resistentes à Castração/tratamento farmacológico , Neoplasias de Próstata Resistentes à Castração/patologia , Proteínas Tirosina Quinases/metabolismo , Receptores Androgênicos/metabolismo
3.
Plant Physiol ; 189(3): 1519-1535, 2022 06 27.
Artigo em Inglês | MEDLINE | ID: mdl-35377452

RESUMO

Heterotrimeric G-protein complexes comprising Gα-, Gß-, and Gγ-subunits and the regulator of G-protein signaling (RGS) are conserved across most eukaryotic lineages. Signaling pathways mediated by these proteins influence overall growth, development, and physiology. In plants, this protein complex has been characterized primarily from angiosperms with the exception of spreading-leaved earth moss (Physcomitrium patens) and Chara braunii (charophytic algae). Even within angiosperms, specific G-protein components are missing in certain species, whereas unique plant-specific variants-the extra-large Gα (XLGα) and the cysteine-rich Gγ proteins-also exist. The distribution and evolutionary history of G-proteins and their function in nonangiosperm lineages remain mostly unknown. We explored this using the wealth of available sequence data spanning algae to angiosperms representing extant species that diverged approximately 1,500 million years ago, using BLAST, synteny analysis, and custom-built Hidden Markov Model profile searches. We show that a minimal set of components forming the XLGαßγ trimer exists in the entire land plant lineage, but their presence is sporadic in algae. Additionally, individual components have distinct evolutionary histories. The XLGα exhibits many lineage-specific gene duplications, whereas Gα and RGS show several instances of gene loss. Similarly, Gß remained constant in both number and structure, but Gγ diverged before the emergence of land plants and underwent changes in protein domains, which led to three distinct subtypes. These results highlight the evolutionary oddities and summarize the phyletic patterns of this conserved signaling pathway in plants. They also provide a framework to formulate pertinent questions on plant G-protein signaling within an evolutionary context.


Assuntos
Proteínas Heterotriméricas de Ligação ao GTP , Evolução Biológica , Proteínas Heterotriméricas de Ligação ao GTP/genética , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Plantas/genética , Plantas/metabolismo , Transdução de Sinais/genética
4.
Plant J ; 109(4): 844-855, 2022 02.
Artigo em Inglês | MEDLINE | ID: mdl-34807484

RESUMO

l-Tyrosine is an essential amino acid for protein synthesis and is also used in plants to synthesize diverse natural products. Plants primarily synthesize tyrosine via TyrA arogenate dehydrogenase (TyrAa or ADH), which are typically strongly feedback inhibited by tyrosine. However, two plant lineages, Fabaceae (legumes) and Caryophyllales, have TyrA enzymes that exhibit relaxed sensitivity to tyrosine inhibition and are associated with elevated production of tyrosine-derived compounds, such as betalain pigments uniquely produced in core Caryophyllales. Although we previously showed that a single D222N substitution is primarily responsible for the deregulation of legume TyrAs, it is unknown when and how the deregulated Caryophyllales TyrA emerged. Here, through phylogeny-guided TyrA structure-function analysis, we found that functionally deregulated TyrAs evolved early in the core Caryophyllales before the origin of betalains, where the E208D amino acid substitution in the active site, which is at a different and opposite location from D222N found in legume TyrAs, played a key role in the TyrA functionalization. Unlike legumes, however, additional substitutions on non-active site residues further contributed to the deregulation of TyrAs in Caryophyllales. The introduction of a mutation analogous to E208D partially deregulated tyrosine-sensitive TyrAs, such as Arabidopsis TyrA2 (AtTyrA2). Moreover, the combined introduction of D222N and E208D additively deregulated AtTyrA2, for which the expression in Nicotiana benthamiana led to highly elevated accumulation of tyrosine in planta. The present study demonstrates that phylogeny-guided characterization of key residues underlying primary metabolic innovations can provide powerful tools to boost the production of essential plant natural products.


Assuntos
Complexos Multienzimáticos/genética , Complexos Multienzimáticos/metabolismo , Mutagênese , Plantas/genética , Plantas/metabolismo , Tirosina/metabolismo , Arabidopsis/genética , Arabidopsis/metabolismo , Proteínas de Arabidopsis , Betalaínas/biossíntese , Caryophyllales/genética , Caryophyllales/metabolismo , Fabaceae , Complexos Multienzimáticos/classificação , Oxirredutases/genética , Oxirredutases/metabolismo , Filogenia , Prefenato Desidrogenase/genética , Prefenato Desidrogenase/metabolismo
5.
Antioxidants (Basel) ; 10(9)2021 Sep 21.
Artigo em Inglês | MEDLINE | ID: mdl-34573132

RESUMO

Plants evolved specialized metabolic pathways through gene duplication and functional divergence of enzymes involved in primary metabolism. The results of this process are varied pathways that produce an array of natural products useful to both plants and humans. In plants, glucosinolates are a diverse class of natural products. Glucosinolate function stems from their hydrolysis products, which are responsible for the strong flavors of Brassicales plants, such as mustard, and serve as plant defense molecules by repelling insects, fighting fungal infections, and discouraging herbivory. Additionally, certain hydrolysis products such as isothiocyanates can potentially serve as cancer prevention agents in humans. The breadth of glucosinolate function is a result of its great structural diversity, which comes from the use of aliphatic, aromatic and indole amino acids as precursors and elongation of some side chains by up to nine carbons, which, after the formation of the core glucosinolate structure, can undergo further chemical modifications. Aliphatic methionine-derived glucosinolates are the most abundant form of these compounds. Although both elongation and chemical modification of amino acid side chains are important for aliphatic glucosinolate diversity, its elongation process has not been well described at the molecular level. Here, we summarize new insights on the iterative chain-elongation enzymes methylthioalkylmalate synthase (MAMS) and isopropylmalate dehydrogenase (IPMDH).

6.
Biochem J ; 478(8): 1511-1513, 2021 04 30.
Artigo em Inglês | MEDLINE | ID: mdl-33881485

RESUMO

P-type ATPase are ubiquitous transport proteins across all kingdoms of life. These proteins share a common mechanism involving phosphorylation of an invariant aspartate to facilitate movement of substrates from protons to phospholipids across cellular membranes. In this issue of the Biochemical Journal, Welle et al. identify a conserved cysteine near the functionally critical aspartate of P-type plasma membrane H+-ATPases that protects the protein from reactive oxygen species.


Assuntos
ATPases Translocadoras de Prótons , Prótons , Transporte Biológico , Membrana Celular/metabolismo , ATPases Translocadoras de Prótons/metabolismo , Espécies Reativas de Oxigênio/metabolismo
7.
Sci Rep ; 10(1): 14989, 2020 09 14.
Artigo em Inglês | MEDLINE | ID: mdl-32929147

RESUMO

ATP sulfurylase, an enzyme which catalyzes the conversion of sulfate to adenosine 5'-phosphosulfate (APS), plays a significant role in controlling sulfur metabolism in plants. In this study, we have expressed soybean plastid ATP sulfurylase isoform 1 in transgenic soybean without its transit peptide under the control of the 35S CaMV promoter. Subcellular fractionation and immunoblot analysis revealed that ATP sulfurylase isoform 1 was predominantly expressed in the cell cytoplasm. Compared with that of untransformed plants, the ATP sulfurylase activity was about 2.5-fold higher in developing seeds. High-resolution 2-D gel electrophoresis and immunoblot analyses revealed that transgenic soybean seeds overexpressing ATP sulfurylase accumulated very low levels of the ß-subunit of ß-conglycinin. In contrast, the accumulation of the cysteine-rich Bowman-Birk protease inhibitor was several fold higher in transgenic soybean plants when compared to the non-transgenic wild-type seeds. The overall protein content of the transgenic seeds was lowered by about 3% when compared to the wild-type seeds. Metabolite profiling by LC-MS and GC-MS quantified 124 seed metabolites out of which 84 were present in higher amounts and 40 were present in lower amounts in ATP sulfurylase overexpressing seeds compared to the wild-type seeds. Sulfate, cysteine, and some sulfur-containing secondary metabolites accumulated in higher amounts in ATP sulfurylase transgenic seeds. Additionally, ATP sulfurylase overexpressing seeds contained significantly higher amounts of phospholipids, lysophospholipids, diacylglycerols, sterols, and sulfolipids. Importantly, over expression of ATP sulfurylase resulted in 37-52% and 15-19% increases in the protein-bound cysteine and methionine content of transgenic seeds, respectively. Our results demonstrate that manipulating the expression levels of key sulfur assimilatory enzymes could be exploited to improve the nutritive value of soybean seeds.


Assuntos
Aminoácidos/metabolismo , Antígenos de Plantas/metabolismo , Globulinas/metabolismo , Glycine max/metabolismo , Proteínas de Armazenamento de Sementes/metabolismo , Proteínas de Soja/metabolismo , Sulfato Adenililtransferase/genética , Inibidor da Tripsina de Soja de Bowman-Birk/metabolismo , Aminoácidos Sulfúricos/genética , Aminoácidos Sulfúricos/metabolismo , Antígenos de Plantas/genética , Regulação da Expressão Gênica de Plantas , Globulinas/genética , Plantas Geneticamente Modificadas , Proteínas de Armazenamento de Sementes/genética , Sementes/genética , Sementes/metabolismo , Proteínas de Soja/genética , Glycine max/genética , Sulfato Adenililtransferase/metabolismo , Inibidor da Tripsina de Soja de Bowman-Birk/genética
8.
Mol Biochem Parasitol ; 238: 111291, 2020 07.
Artigo em Inglês | MEDLINE | ID: mdl-32479776

RESUMO

In free-living and parasitic nematodes, the methylation of phosphoethanolamine to phosphocholine provides a key metabolite to sustain phospholipid biosynthesis for growth and development. Because the phosphoethanolamine methyltransferases (PMT) of nematodes are essential for normal growth and development, these enzymes are potential targets of inhibitor design. The pine wilt nematode (Bursaphelenchus xylophilus) causes extensive damage to trees used for lumber and paper in Asia. As a first step toward testing BxPMT1 as a potential nematicide target, we determined the 2.05 Å resolution x-ray crystal structure of the enzyme as a dead-end complex with phosphoethanolamine and S-adenosylhomocysteine. The three-dimensional structure of BxPMT1 served as a template for site-directed mutagenesis to probe the contribution of active site residues to catalysis and phosphoethanolamine binding using steady-state kinetic analysis. Biochemical analysis of the mutants identifies key residues on the ß1d-α6 loop (W123F, M126I, and Y127F) and ß1e-α7 loop (S155A, S160A, H170A, T178V, and Y180F) that form the phosphobase binding site and suggest that Tyr127 facilitates the methylation reaction in BxPMT1.


Assuntos
Etanolaminas/química , Proteínas de Helminto/química , Metiltransferases/química , Nematoides/enzimologia , Pinus/parasitologia , Doenças das Plantas/parasitologia , Sequência de Aminoácidos , Animais , Sítios de Ligação , Clonagem Molecular , Cristalografia por Raios X , Escherichia coli/genética , Escherichia coli/metabolismo , Etanolaminas/metabolismo , Expressão Gênica , Vetores Genéticos/química , Vetores Genéticos/metabolismo , Proteínas de Helminto/genética , Proteínas de Helminto/metabolismo , Cinética , Metiltransferases/genética , Metiltransferases/metabolismo , Modelos Moleculares , Nematoides/genética , Ligação Proteica , Conformação Proteica em alfa-Hélice , Conformação Proteica em Folha beta , Domínios e Motivos de Interação entre Proteínas , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Alinhamento de Sequência , Homologia de Sequência de Aminoácidos , Especificidade por Substrato , Termodinâmica
9.
J Biol Chem ; 295(2): 335-336, 2020 01 10.
Artigo em Inglês | MEDLINE | ID: mdl-31806701

RESUMO

The diversity of natural products not only fascinates us intellectually, but also provides an armamentarium against the microbes that threaten our health. The increased prevalence of pathogens that are resistant to one or more classes of available medicines continues to be a growing global threat. As drug-resistant pathogens erode the effectiveness of the current reserve of antibiotics and antifungals, methodological advances open additional avenues for discovery of new classes of drugs, as well as novel derivatives of existing (and proven) classes of compounds. In this Thematic Review Series, we aim to provide a snapshot of the current state of the art in natural product discovery. The reviews in this series encapsulate convergent approaches toward the identification of different classes of primary and specialized metabolites, including nonribosomal peptides, polyketides, and ribosomally synthesized and post-translationally modified peptides, from all kingdoms of life. Traction in unraveling new and diverse classes of molecules has come largely from the academic sector, which ensures availability of methods and data sets. Such knowledge is needed to thwart serious threats to human health and calls to mind the proverb praemonitus praemunitus (forewarned is forearmed).


Assuntos
Produtos Biológicos/metabolismo , Vias Biossintéticas , Descoberta de Drogas , Animais , Biologia Computacional/métodos , Descoberta de Drogas/métodos , Humanos , Peptídeos/metabolismo , Policetídeos/metabolismo
10.
J Biol Chem ; 294(45): 16855-16864, 2019 11 08.
Artigo em Inglês | MEDLINE | ID: mdl-31575658

RESUMO

To modulate responses to developmental or environmental cues, plants use Gretchen Hagen 3 (GH3) acyl acid amido synthetases to conjugate an amino acid to a plant hormone, a reaction that regulates free hormone concentration and downstream responses. The model plant Arabidopsis thaliana has 19 GH3 proteins, of which 8 have confirmed biochemical functions. One Brassicaceae-specific clade of GH3 proteins was predicted to use benzoate as a substrate and includes AtGH3.7 and AtGH3.12/PBS3. Previously identified as a 4-hydroxybenzoic acid-glutamate synthetase, AtGH3.12/PBS3 influences pathogen defense responses through salicylic acid. Recent work has shown that AtGH3.12/PBS3 uses isochorismate as a substrate, forming an isochorismate-glutamate conjugate that converts into salicylic acid. Here, we show that AtGH3.7 and AtGH3.12/PBS3 can also conjugate chorismate to cysteine and glutamate, which act as precursors to aromatic amino acids and salicylic acid, respectively. The X-ray crystal structure of AtGH3.12/PBS3 in complex with AMP and chorismate at 1.94 Å resolution, along with site-directed mutagenesis, revealed how the active site potentially accommodates this substrate. Examination of Arabidopsis knockout lines indicated that the gh3.7 mutants do not alter growth and showed no increased susceptibility to the pathogen Pseudomonas syringae, unlike gh3.12 mutants, which were more susceptible than WT plants, as was the gh3.7/gh3.12 double mutant. The findings of our study suggest that GH3 proteins can use metabolic precursors of aromatic amino acids as substrates.


Assuntos
Aminoácidos Aromáticos/metabolismo , Brassicaceae/enzimologia , Ácido Corísmico/metabolismo , Ligases/metabolismo , Ácido Salicílico/metabolismo , Arabidopsis/enzimologia , Domínio Catalítico , Cinética , Ligases/química , Ligases/genética , Modelos Moleculares , Mutação , Especificidade da Espécie , Especificidade por Substrato
11.
Biochem J ; 476(7): 1105-1107, 2019 04 10.
Artigo em Inglês | MEDLINE | ID: mdl-30971459

RESUMO

Nitrilases are versatile enzymes that hydrolyze nitriles to carboxylic acids and ammonia, but many members of this family lack defined biological functions. In plants, nitrilases have been associated with detoxification of cyanide-containing compounds and auxin biosynthesis; however, recent work suggests that the chemical versatility of these proteins contributes to metabolite repair. In this issue of the Biochemical Journal, Niehaus et al. demonstrate that the Nit1 nitrilase from Arabidopsis thaliana functions as a metabolite repair enzyme that removes deaminated glutathione from the cytoplasm and plastids.


Assuntos
Arabidopsis , Amidoidrolases , Aminoidrolases , Glutationa
12.
J Exp Bot ; 70(16): 4089-4103, 2019 08 19.
Artigo em Inglês | MEDLINE | ID: mdl-30825314

RESUMO

Sulfur is an essential element for all organisms. Plants must assimilate this nutrient from the environment and convert it into metabolically useful forms for the biosynthesis of a wide range of compounds, including cysteine and glutathione. This review summarizes structural biology studies on the enzymes involved in plant sulfur assimilation [ATP sulfurylase, adenosine-5'-phosphate (APS) reductase, and sulfite reductase], cysteine biosynthesis (serine acetyltransferase and O-acetylserine sulfhydrylase), and glutathione biosynthesis (glutamate-cysteine ligase and glutathione synthetase) pathways. Overall, X-ray crystal structures of enzymes in these core pathways provide molecular-level information on the chemical events that allow plants to incorporate sulfur into essential metabolites and revealed new biochemical regulatory mechanisms, such as structural rearrangements, protein-protein interactions, and thiol-based redox switches, for controlling different steps in these pathways.


Assuntos
Glutationa/metabolismo , Proteínas de Plantas/química , Plantas/metabolismo , Enxofre/metabolismo , Regulação da Expressão Gênica de Plantas , Glutationa/química , Oxirredução , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Plantas/química , Plantas/enzimologia , Plantas/genética , Enxofre/química
13.
Plant Sci ; 272: 14-21, 2018 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-29807584

RESUMO

Soybeans are an excellent source of protein in monogastric diets and rations with ∼75% of soybeans produced worldwide used primarily for animal feed. Even though soybeans are protein-rich and have a well-balanced amino acid profile, the nutritive quality of this important crop could be further improved by elevating the concentrations of certain amino acids. The levels of the sulfur-containing amino acids cysteine and methionine in soybean seed proteins are inadequate for optimal growth and development of monogastric animals, which necessitates dietary supplementation. Subsequently, concerted efforts have been made to increase the concentrations of cysteine and methionine in soybean seeds by both classical breeding and genetic engineering; however, these efforts have met with only limited success. In this review, we discuss the strengths and weakness of different approaches in elevating the sulfur amino acid content of soybeans. Manipulation of enzymes involved in the sulfur assimilatory pathway appears to be a viable avenue for improving sulfur amino acid content. This approach requires a through biochemical characterization of sulfur assimilatory enzymes in soybean seeds. We highlight recent studies targeting key sulfur assimilatory enzymes and the manipulation of sulfur metabolism in transgenic soybeans to improve the nutritive value of soybean proteins.


Assuntos
Cisteína/metabolismo , Glycine max/metabolismo , Metionina/metabolismo , Sementes/metabolismo , Cisteína/análise , Redes e Vias Metabólicas/genética , Metionina/análise , Proteínas de Plantas/análise , Proteínas de Plantas/metabolismo , Sementes/química , Glycine max/química , Glycine max/genética
14.
Sci Rep ; 8(1): 2367, 2018 02 05.
Artigo em Inglês | MEDLINE | ID: mdl-29402985

RESUMO

Nitrogen-fixing nodules, which are also major sites of sulfur assimilation, contribute significantly to the sulfur needs of whole soybean plants. Nodules are the predominant sites for cysteine accumulation and the activity of O-acetylserine(thiol)lyase (OASS) is central to the sulfur assimilation process in plants. Here, we examined the impact of overexpressing OASS on soybean nodulation and nodule metabolome. Overexpression of OASS did not affect the nodule number, but negatively impacted plant growth. HPLC measurement of antioxidant metabolites demonstrated that levels of cysteine, glutathione, and homoglutathione nearly doubled in OASS overexpressing nodules when compared to control nodules. Metabolite profiling by LC-MS and GC-MS demonstrated that several metabolites related to serine, aspartate, glutamate, and branched-chain amino acid pathways were significantly elevated in OASS overexpressing nodules. Striking differences were also observed in the flavonoid levels between the OASS overexpressing and control soybean nodules. Our results suggest that OASS overexpressing plants compensate for the increase in carbon requirement for sulfur assimilation by reducing the biosynthesis of some amino acids, and by replenishing the TCA cycle through fatty acid hydrolysis. These data may indicate that in OASS overexpressing soybean nodules there is a moderate decease in the supply of energy metabolites to the nodule, which is then compensated by the degradation of cellular components to meet the needs of the nodule energy metabolism.


Assuntos
Cisteína Sintase/biossíntese , Citosol/enzimologia , Expressão Gênica , Glycine max/enzimologia , Metaboloma , Isoformas de Proteínas/biossíntese , Nódulos Radiculares de Plantas/enzimologia , Antioxidantes/análise , Cromatografia Líquida de Alta Pressão , Cromatografia Líquida , Cisteína/análise , Cisteína Sintase/genética , Citosol/química , Cromatografia Gasosa-Espectrometria de Massas , Glutationa/análogos & derivados , Glutationa/análise , Isoformas de Proteínas/genética , Nódulos Radiculares de Plantas/química , Glycine max/química , Glycine max/crescimento & desenvolvimento
15.
Plant J ; 94(2): 304-314, 2018 04.
Artigo em Inglês | MEDLINE | ID: mdl-29405514

RESUMO

Aromatic amino acids are protein building blocks and precursors to a number of plant natural products, such as the structural polymer lignin and a variety of medicinally relevant compounds. Plants make tyrosine and phenylalanine by a different pathway from many microbes; this pathway requires prephenate aminotransferase (PAT) as the key enzyme. Prephenate aminotransferase produces arogenate, the unique and immediate precursor for both tyrosine and phenylalanine in plants, and also has aspartate aminotransferase (AAT) activity. The molecular mechanisms governing the substrate specificity and activation or inhibition of PAT are currently unknown. Here we present the X-ray crystal structures of the wild-type and various mutants of PAT from Arabidopsis thaliana (AtPAT). Steady-state kinetic and ligand-binding analyses identified key residues, such as Glu108, that are involved in both keto acid and amino acid substrate specificities and probably contributed to the evolution of PAT activity among class Ib AAT enzymes. Structures of AtPAT mutants co-crystallized with either α-ketoglutarate or pyridoxamine 5'-phosphate and glutamate further define the molecular mechanisms underlying recognition of keto acid and amino acid substrates. Furthermore, cysteine was identified as an inhibitor of PAT from A. thaliana and Antirrhinum majus plants as well as the bacterium Chlorobium tepidum, uncovering a potential new effector of PAT.


Assuntos
Proteínas de Arabidopsis/metabolismo , Arabidopsis/enzimologia , Transaminases/metabolismo , Aminoácidos/metabolismo , Arabidopsis/metabolismo , Proteínas de Arabidopsis/antagonistas & inibidores , Domínio Catalítico , Cristalografia por Raios X , Cisteína/farmacologia , Cetoácidos/metabolismo , Redes e Vias Metabólicas , Conformação Proteica , Especificidade por Substrato , Transaminases/antagonistas & inibidores
16.
J Biol Chem ; 292(52): 21690-21702, 2017 12 29.
Artigo em Inglês | MEDLINE | ID: mdl-29084845

RESUMO

Phosphocholine (pCho) is a precursor for phosphatidylcholine and osmoprotectants in plants. In plants, de novo synthesis of pCho relies on the phosphobase methylation pathway. Phosphoethanolamine methyltransferase (PMT) catalyzes the triple methylation of phosphoethanolamine (pEA) to pCho. The plant PMTs are di-domain methyltransferases that divide the methylation of pEA in one domain from subsequent methylations in the second domain. To understand the molecular basis of this architecture, we examined the biochemical properties of three Arabidopsis thaliana PMTs (AtPMT1-3) and determined the X-ray crystal structures of AtPMT1 and AtPMT2. Although each isoform synthesizes pCho from pEA, their physiological roles differ with AtPMT1 essential for normal growth and salt tolerance, whereas AtPMT2 and AtPMT3 overlap functionally. The structures of AtPMT1 and AtPMT2 reveal unique features in each methyltransferase domain, including active sites that use different chemical mechanisms for phosphobase methylation. These structures also show how rearrangements in both the active sites and the di-domain linker form catalytically competent active sites and provide insight on the evolution of the PMTs in plants, nematodes, and apicomplexans. Connecting conformational changes with catalysis in modular enzymes, like the PMT, provides new insights on interdomain communication in biosynthetic systems.


Assuntos
Metiltransferases/metabolismo , Metiltransferases/fisiologia , Arabidopsis/metabolismo , Proteínas de Arabidopsis/metabolismo , Domínio Catalítico/fisiologia , Cristalografia por Raios X/métodos , Cinética , Metilação , Metiltransferases/genética , Modelos Moleculares , Fosforilcolina/química , Domínios Proteicos
17.
Int J Mol Sci ; 18(3)2017 Feb 28.
Artigo em Inglês | MEDLINE | ID: mdl-28264526

RESUMO

Grass pea (Lathyrus sativus L.) is an important legume crop grown mainly in South Asia and Sub-Saharan Africa. This underutilized legume can withstand harsh environmental conditions including drought and flooding. During drought-induced famines, this protein-rich legume serves as a food source for poor farmers when other crops fail under harsh environmental conditions; however, its use is limited because of the presence of an endogenous neurotoxic nonprotein amino acid ß-N-oxalyl-l-α,ß-diaminopropionic acid (ß-ODAP). Long-term consumption of Lathyrus and ß-ODAP is linked to lathyrism, which is a degenerative motor neuron syndrome. Pharmacological studies indicate that nutritional deficiencies in methionine and cysteine may aggravate the neurotoxicity of ß-ODAP. The biosynthetic pathway leading to the production of ß-ODAP is poorly understood, but is linked to sulfur metabolism. To date, only a limited number of studies have been conducted in grass pea on the sulfur assimilatory enzymes and how these enzymes regulate the biosynthesis of ß-ODAP. Here, we review the current knowledge on the role of sulfur metabolism in grass pea and its contribution to ß-ODAP biosynthesis. Unraveling the fundamental steps and regulation of ß-ODAP biosynthesis in grass pea will be vital for the development of improved varieties of this underutilized legume.


Assuntos
Diamino Aminoácidos/química , Diamino Aminoácidos/metabolismo , Lathyrus/química , Lathyrus/metabolismo , Vias Biossintéticas , Clonagem Molecular , Cisteína Sintase/genética , Cisteína Sintase/metabolismo , Expressão Gênica , Estudos de Associação Genética , Sulfeto de Hidrogênio/metabolismo , Lathyrus/genética , Liases/genética , Liases/metabolismo , Nitrogênio/metabolismo , Estresse Oxidativo , Melhoramento Vegetal , Relação Estrutura-Atividade , Enxofre/metabolismo
18.
J Biol Chem ; 291(32): 16740-52, 2016 08 05.
Artigo em Inglês | MEDLINE | ID: mdl-27252378

RESUMO

Amaryllidaceae alkaloids are a large group of plant natural products with over 300 documented structures and diverse biological activities. Several groups of Amaryllidaceae alkaloids including the hemanthamine- and crinine-type alkaloids show promise as anticancer agents. Two reduction reactions are required for the production of these compounds: the reduction of norcraugsodine to norbelladine and the reduction of noroxomaritidine to normaritidine, with the enantiomer of noroxomaritidine dictating whether the derivatives will be the crinine-type or hemanthamine-type. It is also possible for the carbon-carbon double bond of noroxomaritidine to be reduced, forming the precursor for maritinamine or elwesine depending on the enantiomer reduced to an oxomaritinamine product. In this study, a short chain alcohol dehydrogenase/reductase that co-expresses with the previously discovered norbelladine 4'-O-methyltransferase from Narcissus sp. and Galanthus spp. was cloned and expressed in Escherichia coli Biochemical analyses and x-ray crystallography indicates that this protein functions as a noroxomaritidine reductase that forms oxomaritinamine from noroxomaritidine through a carbon-carbon double bond reduction. The enzyme also reduces norcraugsodine to norbelladine with a 400-fold lower specific activity. These studies identify a missing step in the biosynthesis of this pharmacologically important class of plant natural products.


Assuntos
Alcaloides de Amaryllidaceae/química , Galanthus/enzimologia , Narcissus/enzimologia , Oxirredutases/química , Proteínas de Plantas/química , Alcaloides de Amaryllidaceae/metabolismo , Galanthus/genética , Narcissus/genética , Oxirredução , Oxirredutases/genética , Oxirredutases/metabolismo , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo
19.
Chem Biol Interact ; 259(Pt A): 31-38, 2016 Nov 25.
Artigo em Inglês | MEDLINE | ID: mdl-26926807

RESUMO

In plants, sulfur is an essential nutrient that must be converted into usable metabolic forms for the formation of sulfur-containing amino acids and peptides (primary route) and for the modification of diverse metabolites (secondary route). In plants, the fate of assimilated sulfate depends on the three enzymes - ATP sulfurylase, adenosine-5'-phosphate (APS) reductase, and APS kinase - that form a branchpoint in the pathway. ATP sulfurylase catalyzes the formation of the critical intermediate APS, which can either be used in the primary assimilatory route or be phosphorylated to 3'-phospho-APS (PAPS) for a variety of sulfation reactions. Recent biochemical and structural studies of the branchpoint enzymes in plant sulfur metabolism suggest that redox-regulation may control sulfur partitioning between primary and secondary routes. Disulfide-based redox switches differentially affect APS reductase and APS kinase. Oxidative conditions that promote disulfide formation increase the activity of APS reductase and decreases PAPS production by APS kinase. Here we review recent work on the ATP sulfurylase and APS kinase from plants that provide new insight on the regulation of PAPS formation, the structural evolution of these enzymes in different organisms, and redox-control of this key branchpoint in plant sulfur metabolism.


Assuntos
Redes e Vias Metabólicas , Plantas/metabolismo , Sulfatos/metabolismo , Oxirredução , Proteínas de Plantas/metabolismo , Plantas/enzimologia
20.
J Biol Chem ; 290(41): 24705-14, 2015 Oct 09.
Artigo em Inglês | MEDLINE | ID: mdl-26294763

RESUMO

In plants, adenosine 5'-phosphosulfate (APS) kinase (APSK) is required for reproductive viability and the production of 3'-phosphoadenosine 5'-phosphosulfate (PAPS) as a sulfur donor in specialized metabolism. Previous studies of the APSK from Arabidopsis thaliana (AtAPSK) identified a regulatory disulfide bond formed between the N-terminal domain (NTD) and a cysteine on the core scaffold. This thiol switch is unique to mosses, gymnosperms, and angiosperms. To understand the structural evolution of redox control of APSK, we investigated the redox-insensitive APSK from the cyanobacterium Synechocystis sp. PCC 6803 (SynAPSK). Crystallographic analysis of SynAPSK in complex with either APS and a non-hydrolyzable ATP analog or APS and sulfate revealed the overall structure of the enzyme, which lacks the NTD found in homologs from mosses and plants. A series of engineered SynAPSK variants reconstructed the structural evolution of the plant APSK. Biochemical analyses of SynAPSK, SynAPSK H23C mutant, SynAPSK fused to the AtAPSK NTD, and the fusion protein with the H23C mutation showed that the addition of the NTD and cysteines recapitulated thiol-based regulation. These results reveal the molecular basis for structural changes leading to the evolution of redox control of APSK in the green lineage from cyanobacteria to plants.


Assuntos
Cianobactérias/enzimologia , Evolução Molecular , Fosfotransferases (Aceptor do Grupo Álcool)/química , Fosfotransferases (Aceptor do Grupo Álcool)/metabolismo , Plantas/enzimologia , Adenosina Fosfossulfato/metabolismo , Adenilil Imidodifosfato/metabolismo , Sequência de Aminoácidos , Arabidopsis/enzimologia , Cristalografia por Raios X , Humanos , Hidrólise , Cinética , Magnésio/metabolismo , Modelos Moleculares , Dados de Sequência Molecular , Oxirredução , Estrutura Terciária de Proteína , Synechocystis/enzimologia
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