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1.
J Chem Theory Comput ; 16(5): 2914-2929, 2020 May 12.
Artigo em Inglês | MEDLINE | ID: mdl-32271568

RESUMO

The chiral-induced spin selectivity (CISS) effect, which describes the spin-filtering ability of diamagnetic structures like DNA or peptides having chiral symmetry, has emerged in the past years as the central mechanism behind a number of important phenomena, like long-range biological electron transfer, enantiospecific electrocatalysis, and molecular recognition. Also, CISS-induced spin polarization has a considerable promise for new spintronic devices and the design of quantum materials. The CISS effect is attributed to spin-orbit coupling, but a sound theoretical understanding of the surprising magnitude of this effect in molecules without heavy atoms is currently lacking. We are taking an essential step into this direction by analyzing the importance of imaginary terms in the Hamiltonian as a necessary condition for nonvanishing spin polarization in helical structures. On the basis of first-principles calculations and analytical considerations, we perform a symmetry analysis of the key quantities determining transport probabilities of electrons of different spin orientations. These imaginary terms originate from the spin-orbit coupling, and they preserve the Hermitian nature of the Hamiltonian. Hence, they are not related to the breaking of time-reversal symmetry resulting from the fact that molecules are open systems in a junction. Our symmetry analysis helps to identify essential constraints in the theoretical description of the CISS effect. We further draw an analogy with the appearance of imaginary terms in simple models of barrier scattering, which may help understanding the unusually effective long-range electron transfer in biological systems.


Assuntos
DNA/química , Teoria da Densidade Funcional , Peptídeos/química , Transporte de Elétrons , Elétrons , Ouro/química
2.
Small ; 13(2)2017 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-27753200

RESUMO

The electronic spin filtering capability of a single chiral helical peptide is measured. A ferromagnetic electrode source is employed to inject spin-polarized electrons in an asymmetric single-molecule junction bridging an α-helical peptide sequence of known chirality. The conductance comparison between both isomers allows the direct determination of the polarization power of an individual chiral molecule.


Assuntos
Peptídeos/química , Marcadores de Spin , Sequência de Aminoácidos , Condutividade Elétrica , Eletrodos , Elétrons , Ouro/química , Níquel/química , Estereoisomerismo
3.
J Am Chem Soc ; 137(3): 1109-15, 2015 Jan 28.
Artigo em Inglês | MEDLINE | ID: mdl-25562523

RESUMO

Here we report the electrocatalytic reduction of protons to hydrogen by a novel S2P2 coordinated nickel complex, [Ni(bdt)(dppf)] (bdt = 1,2-benzenedithiolate, dppf = 1,1'-bis(diphenylphosphino)ferrocene). The catalysis is fast and efficient with a turnover frequency of 1240 s(-1) and an overpotential of only 265 mV for half activity at low acid concentrations. Furthermore, catalysis is possible using a weak acid, and the complex is stable for at least 4 h in acidic solution. Calculations of the system carried out at the density functional level of theory (DFT) are consistent with a mechanism for catalysis in which both protonations take place at the nickel center.


Assuntos
Hidrogênio/química , Níquel/química , Compostos Organometálicos/química , Fosfinas/química , Catálise , Técnicas Eletroquímicas , Modelos Moleculares , Conformação Molecular , Compostos Organometálicos/síntese química , Teoria Quântica
4.
J Phys Chem A ; 112(40): 9771-83, 2008 Oct 09.
Artigo em Inglês | MEDLINE | ID: mdl-18788718

RESUMO

A nanosystem formed by a high electric dipole moment thiopolypeptide alpha-helix, consisting of eight l-glycine units, chemisorbed on the (111) surface of Au23 and Au55 clusters, with the S as the linking atom, was studied using the wave function broken symmetry UDFT method. We have found a strong correlation between the orientation of the electric dipole of the alpha-helix and charge transfer and the magnetic behavior of the adsorbate-cluster system. Upon chemisorption, dipole moments may be quenched or enhanced, with respect to the gas phase value, with the strongest reduction corresponding to the magnetic state. A reduction of the alpha-helix's electric dipole with the net charge transfer from the Au surface was obtained for the more stable state. In this state description, it may happen that the calculated spin densities of the chemisorbed alpha-helix and its free radical form are similar. The magnetic properties are strongly dependent on the size of the Au cluster and on its electronic structure with respect to nuclei positions. In general, the localized spin density per atom increases and the magnetization of the extended system decreases with cluster size, a trend found experimentally for organic monolayers with a similar type of adsorbate we consider here.


Assuntos
Ouro/química , Magnetismo , Peptídeos/química , Teoria Quântica , Enxofre/química , Adsorção , Propriedades de Superfície
5.
Ann N Y Acad Sci ; 1006: 68-81, 2003 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-14976010

RESUMO

Although very few measurements have appeared in the open literature and there seems to be a controversy about the existence of the NDR phenomenon in molecules, the prospects of building such systems have attracted significant attention. In the work reported in this paper we used a model based on DFT calculations of the electronic structure of the 2'-amino-4,4'-di(ethynylphenyl)-5'-nitro-1-benzenethiolate molecule (previously reported to exhibit NDR behavior) in a capacitor-like electric field that mimics the potential spatial profile of the junction. Our results suggest that in these systems, there seems to be a correlation between a substantial charge density rearrangement of the neutral bridge at a threshold voltage and the NDR behavior observed in previous experiments. Our results highlight the importance of inclusion of the field in the study of electrified interfaces. We applied this model to a fluorine-substituted conjugated diethynylphenyl molecule and found that these calculations predict similar behavior. Results based on extended system calculations, including electrode-molecule interactions, confirm the validity of the model based on the isolated molecule and suggest the use of these simple models to rationally design molecular devices with similar switching characteristics.


Assuntos
Algoritmos , Alcenos/química , Capacitância Elétrica , Eletroquímica/métodos , Transporte de Elétrons , Eletrônica/métodos , Etilenos/química , Modelos Químicos , Simulação por Computador , Condutividade Elétrica , Impedância Elétrica , Eletroquímica/instrumentação , Eletrodos , Eletrônica/instrumentação , Conformação Molecular
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