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1.
J Phys Chem A ; 127(50): 10600-10612, 2023 Dec 21.
Artigo em Inglês | MEDLINE | ID: mdl-38085654

RESUMO

The aqueous electron affinity and aqueous reduction potentials for F•, Cl•, Br•, I•, OH•, SH•, SeH•, TeH•, ClO•, BrO•, and IO• were calculated using electronic structure methods for explicit cluster models coupled with a self-consistent reaction field (SMD) to treat the aqueous solvent. Calculations were conducted using MP2 and correlated molecular orbital theory up to the CCSD(T)-F12b level for water tetramer clusters and MP2 for octamer cluster. Inclusion of explicit waters was found to be important for accurately predicting the redox potentials in a number of cases. The calculated reduction potentials for X• and ChH• were predicted to within ∼0.1 V of the reported literature values. Fluorine is anomalous due to abstraction of a hydrogen from one of the surrounding water molecules to form a hydroxyl radical and hydrogen fluoride, so its redox potential was calculated using only an implicit model. Larger deviations from experiment were predicted for ClO• and BrO•. These deviations are due to the free energy of solvation of the anion being too negative, as found in the pKa calculations, and that for the neutral being too positive with the current approach.

2.
Dalton Trans ; 51(6): 2135-2157, 2022 Feb 08.
Artigo em Inglês | MEDLINE | ID: mdl-35029613

RESUMO

The iron-catalyzed disproportionation of H2O2 has been investigated for over a century, as has been its ability to induce the oxidation of other species present in the system (Fenton reaction). The mechanisms of these reactions have been under consideration at least since 1932. Unfortunately, little or no attention has been paid to ensuring the conformity of the proposed mechanisms and rate constants with the constraints of the principle of detailed balancing. Here we identify more than 200 publications having mechanisms that violate the principle of detailed balancing. These violations occur through the use of incorrect values for certain rate constants, the use of incorrect forms of the rate laws for certain steps in the mechanisms, and the inclusion of illegal loops. A core mechanism for the iron-catalyzed decomposition of H2O2 is proposed that is consistent with the principle of detailed balancing and includes both the one-electron oxidation of H2O2 by Fe(III) and the Fe(II) reduction of HO2˙.

3.
Clin Otolaryngol ; 45(4): 437-444, 2020 07.
Artigo em Inglês | MEDLINE | ID: mdl-31971339

RESUMO

This paper explores the concept of advocacy in head and neck cancer. We define inherent challenges in the development and success of advocacy within this context and offer ways to embed it within clinical practice. We outline what advocacy is, ways in which it may benefit people with head and neck cancer and the engagement required from healthcare professionals to facilitate advocacy to improve outcomes.


Assuntos
Neoplasias de Cabeça e Pescoço/terapia , Defesa do Paciente , Equipe de Assistência ao Paciente , Humanos , Cultura Organizacional
4.
J Phys Chem A ; 123(47): 10240-10245, 2019 Nov 27.
Artigo em Inglês | MEDLINE | ID: mdl-31693368

RESUMO

Large-scale kinetic models containing more than 50 homogeneous reaction steps have been developed to help understand the behavior of actinide solutions in various circumstances. One specific objective is to understand the behaviors in nitrate solutions as such solutions are used in actinide separations. A challenge arises in developing these large-scale models while ensuring compliance with the principle of detailed balancing because it can be very difficult to identify all embedded reaction loops. These loops can violate the principle of detailed balancing either by consisting of reversible steps that do not meet Wegscheider's condition or by having unopposed irreversible steps that cause illegality. Here we report the development of DETBAL, which is a software code that systematically identifies a basis of reversible loops and a basis of all loops within the model, and then automatically checks for illegal loops. We apply DETBAL to two recent large-scale models of the radiation of nitrate solutions, show that these models violate the principle of detailed balancing in many ways, provide potential solutions to these violations, and demonstrate the effect of some of these modifications.

5.
J Phys Chem A ; 123(26): 5436-5445, 2019 Jul 05.
Artigo em Inglês | MEDLINE | ID: mdl-31240925

RESUMO

It is not uncommon for proposed complex reaction mechanisms to violate the principle of detailed balancing. Here, we draw attention to three ways in which such violations can occur: reversible reaction loops where the rate constants do not attain closure, illegal loops, and reversible steps having rate equations in the forward and reverse directions that are inconsistent with the equilibrium expressions. We present two simple methods to test whether a proposed mechanism is consistent with the first two aspects of the principle of detailed balancing. Both methods are restricted to closed homogeneous isothermal reactions having mechanisms that consist of stoichiometrically balanced reaction steps. The first method is restricted to mechanisms in which all reaction steps are reversible; values of Δf G° are assigned to all reaction species, equilibrium constants are then computed for all steps, and all rate constants for elementary steps are constrained by the relationship Keq = kf/ kr. The second method is applicable to mechanisms that can consist of a series of reversible and/or irreversible reaction steps. One first examines the subset of reversible steps to determine whether any of these steps are stoichiometrically equivalent to a combination of any of the other steps. If so, the forward and reverse rate expressions must yield equilibrium constants that are in agreement with the stoichiometric relationships. Next, the complete set of steps is examined to look for "illegal reaction loops". Both of these procedures are performed by constructing matrices that represent the stoichiometries of the various reaction steps and then performing row reductions to identify basis sets of loops. A method based on linear programming is described that determines whether a mechanism contains any illegal loops. These methods are applied in the analysis of several published reaction mechanisms.

6.
J Phys Chem B ; 118(4): 1097-101, 2014 Jan 30.
Artigo em Inglês | MEDLINE | ID: mdl-24400869

RESUMO

We report the results of an experimental study of the oxidation of cysteinesulfinic acid (CysSO2H) by [IrCl6](2-) in aqueous media at 25 °C in order to gain insight into the mechanisms of oxidation of alkylsulfinic acids by simple one-electron oxidants. When the reaction is performed with exclusion of O2 between pH 3 and 5, it is complete in several seconds. The products are [IrCl6](3-) and CysSO3H. Kinetic data obtained by stopped-flow UV-vis methods with [CysSO2H] ≫ [Ir(IV)]0 reveal the rate law to be -d[Ir(IV)]/dt = k[Ir(IV)](2)[CysSO2H]/[Ir(III)] with a negligible pH dependence. The value of k is (6.8 ± 0.12) × 10(3) M(-1) s(-1) at µ = 0.1 M (NaClO4). A mechanism is inferred in which the first step is a rapid and reversible electron-transfer equilibrium between Ir(IV) and CysSO2(-) to form Ir(III) and CysSO2(•). The second step is the rate-limiting inner-sphere oxidation of CysSO2(•) by Ir(IV). Production of CysSO3H is proposed to occur through hydrolysis of an Ir(III)-bound sulfonyl chloride that is the immediate product of the inner-sphere second step.


Assuntos
Cisteína/análogos & derivados , Irídio/química , Ácidos Sulfênicos/química , Cisteína/química , Conformação Molecular , Oxirredução
7.
Inorg Chem ; 51(24): 13303-11, 2012 Dec 17.
Artigo em Inglês | MEDLINE | ID: mdl-23186256

RESUMO

The aqueous oxidations of glutathione (GSH) by [IrCl(6)](2-), [Fe(bpy)(2)(CN)(2)](+), and [Fe(bpy)(CN)(4)](-) are described. All three reactions are highly susceptible to catalysis by traces of copper ions, but this catalysis can be fully suppressed with suitable chelating agents. The direct oxidation by [IrCl(6)](2-) yields [IrCl(6)](3-) and GSO(3)(-); some GSSG is also obtained in the presence of O(2). The two Fe(III) oxidants are reduced to their corresponding Fe(II) complexes with nearly quantitative formation of GSSG. The kinetics of these reactions have been studied at 25 °C and µ = 0.1 M between pH 1 and 11. All three reactions have rate laws that are first order in [M(ox)] and [GSH](t) and show a general increase in rate with increasing pH. Detailed studies of the pH dependence enable the rate law to be elaborated with terms for reaction of the individual protonation states of GSH. These pH-resolved rate constants are interpreted with a mechanism having rate-limiting outer-sphere electron-transfer from the various thiolate forms of GSH.


Assuntos
2,2'-Dipiridil/química , Complexos de Coordenação/química , Glutationa/química , Irídio/química , Ferro/química , Nitrilas/química , Piridinas/química , Concentração de Íons de Hidrogênio , Oxirredução , Água/química
8.
Inorg Chem ; 47(3): 1224-36, 2008 Feb 04.
Artigo em Inglês | MEDLINE | ID: mdl-18177037

RESUMO

The oxidation of L-cysteine by the outer-sphere oxidants [Fe(bpy)2(CN)2]+ and [Fe(bpy)(CN)4]- in anaerobic aqueous solution is highly susceptible to catalysis by trace amounts of copper ions. This copper catalysis is effectively inhibited with the addition of 1.0 mM dipicolinic acid for the reduction of [Fe(bpy)2(CN)2]+ and is completely suppressed with the addition of 5.0 mM EDTA (pH<9.00), 10.0 mM EDTA (9.010.0) for the reduction of [Fe(bpy)(CN)4]-. 1H NMR and UV-vis spectra show that the products of the direct (uncatalyzed) reactions are the corresponding Fe(II) complexes and, when no radical scavengers are present, L-cystine, both being formed quantitatively. The two reactions display mild kinetic inhibition by Fe(II), and the inhibition can be suppressed by the free radical scavenger PBN (N-tert-butyl-alpha-phenylnitrone). At 25 degrees C and micro=0.1 M and under conditions where inhibition by Fe(II) is insignificant, the general rate law is -d[Fe(III)]/dt=k[cysteine]tot[Fe(III)], with k={k2Ka1[H+]2+k3Ka1Ka2[H+]+k4Ka1Ka2Ka3{/}[H+]3+Ka1[H+]2+Ka1Ka2[H+]+Ka1Ka2Ka3}, where Ka1, Ka2, and Ka3 are the successive acid dissociation constants of HSCH2CH(NH3+)CO2H. For [Fe(bpy)2(CN)2]+, the kinetics over the pH range of 3-7.9 yields k2=3.4+/-0.6 M(-1) s(-1) and k3=(1.18+/-0.02)x10(6) M(-1) s(-1) (k4 is insignificant in the fitting). For [Fe(bpy)(CN)4]- over the pH range of 6.1-11.9, the rate constants are k3=(2.13+/-0.08)x10(3) M(-1) s(-1) and k4=(1.01+/-0.06)x10(4) M(-1) s(-1) (k2 is insignificant in the fitting). All three terms in the rate law are assigned to rate-limiting electron-transfer reactions in which various thiolate forms of cysteine are reactive. Applying Marcus theory, the self-exchange rate constant of the *SCH2CH(NH2)CO2-/-SCH2CH(NH2)CO2- redox couple was obtained from the oxidation of L-cysteine by [Fe(bpy)(CN)4]-, with k11=4x10(5) M(-1) s(-1). The self-exchange rate constant of the *SCH2CH(NH3+)CO2-/-SCH2CH(NH3+)CO2- redox couple was similarly obtained from the rates with both Fe(III) oxidants, a value of 6x10(6) M(-1) s(-1) for k11 being derived. Both self-exchange rate constants are quite large as is to be expected from the minimal rearrangement that follows conversion of a thiolate to a thiyl radical, and the somewhat lower self-exchange rate constant for the dianionic form of cysteine is ascribed to electrostatic repulsion.


Assuntos
Cisteína/química , Compostos Férricos/química , Catálise , Cinética , Espectroscopia de Ressonância Magnética , Oxirredução , Espectrofotometria Ultravioleta
9.
Prostate ; 67(9): 943-54, 2007 Jun 15.
Artigo em Inglês | MEDLINE | ID: mdl-17440980

RESUMO

BACKGROUND: Membrane proteins provide the interface between the cell and its environment and are responsible for cell adhesion, mobility, and intracellular signaling. Previous studies have focused on the LNCaP whole cell proteome and transcriptome but little is known about proteins at the prostate cell membrane and how they change in response to androgens. MATERIALS AND METHODS: Following treatment with R1881 or vehicle, membrane proteins of the prostate cancer LNCaP cell line were tagged with biotin using EZ-link sulfo-NHS-LC-biotin. Using the tag membrane proteins were purified and separated using two-dimensional gel electrophoresis and identified using mass spectrometry. E-cadherin and low density lipoprotein receptor (LDLR) were used as positive controls and also investigated following bicalutamide treatment. Membrane localization and androgen-regulation of proteins was confirmed using sub-cellular fractionation, Western blotting and microscopy. RESULTS: We have demonstrated efficient and specific protein biotinylation and purification of LNCaP plasma membrane proteins using Western analysis. E-cadherin and LDLR were regulated at the cell surface in response to R1881 and bicalutamide. Mass spectrometry identified several androgen-regulated membrane associated proteins including Prx-3 and GRP78 which are known to localize to other cellular compartments as well as the plasma membrane. We confirmed the localization of the identified proteins in LNCaP cells by co-localization with E-cadherin and immunohistochemistry of prostate tissue. CONCLUSION: Cell surface biotinylation is an effective technique for identifying membrane proteins in the LNCaP prostate cancer cell line. We have demonstrated the identification of androgen-regulated membrane proteins and their validation in tissue samples.


Assuntos
Proteínas de Membrana/metabolismo , Neoplasias da Próstata/patologia , Androgênios/farmacologia , Biotinilação , Linhagem Celular Tumoral , Eletroforese em Gel Bidimensional , Chaperona BiP do Retículo Endoplasmático , Humanos , Masculino , Proteínas de Membrana/isolamento & purificação , Metribolona/farmacologia , Proteínas de Neoplasias/isolamento & purificação , Proteínas de Neoplasias/metabolismo , Projetos Piloto
10.
Inorg Chem ; 46(9): 3663-8, 2007 Apr 30.
Artigo em Inglês | MEDLINE | ID: mdl-17397146

RESUMO

The reactions of 237NpO2 with excess iodate under acidic hydrothermal conditions result in the isolation of the neptunium(IV), neptunium(V), and neptunium(VI) iodates, Np(IO3)4, Np(IO3)4.nH2O.nHIO3, NpO2(IO3), NpO2(IO3)2(H2O), and NpO2(IO3)2.H2O, depending on both the pH and the amount of water present in the reactions. Reactions with less water and lower pH favor reduced products. Although the initial redox processes involved in the reactions between 237NpO2 or 242PuO2 and iodate are similar, the low solubility of Pu(IO3)4 dominates product formation in plutonium iodate reactions to a much greater extent than does Np(IO3)4 in the neptunium iodate system. UO2 reacts with iodate under these conditions to yield uranium(VI) iodates solely. The isotypic structures of the actinide(IV) iodates, An(IO3)4 (An=Np, Pu), are reported and consist of one-dimensional chains of dodecahedral An(IV) cations bridged by iodate anions. The structure of Np(IO3)4.nH2O.nHIO3 is constructed from NpO9 tricapped-trigonal prisms that are bridged by iodate into a polar three-dimensional framework structure. Second-harmonic-generation measurements on a polycrystalline sample of the Th analogue of Np(IO3)4.nH2O.nHIO3 reveal a response of approximately 12x that of alpha-SiO2. Single-crystal magnetic susceptibility measurements of Np(IO3)4 show magnetically isolated Np(IV) ions.

11.
Inorg Chem ; 44(10): 3541-50, 2005 May 16.
Artigo em Inglês | MEDLINE | ID: mdl-15877437

RESUMO

The oxidation of cysteine by [Mo(CN)(8)](3-) in deoxygenated aqueous solution at a moderate pH is strongly catalyzed by Cu(2+), to the degree that impurity levels of Cu(2+) are sufficient to dominate the reaction. Dipicolinic acid (dipic) is a very effective inhibitor of this catalysis, such that with 1 mM dipic, the direct oxidation can be studied. UV-vis spectra and electrochemistry show that [Mo(CN)(8)](4-) is the Mo-containing product. Cystine and cysteinesulfinate are the predominant cysteine oxidation products. The stoichiometric ratio (Deltan(Mo(V))/Deltan(cysteine)) of 1.4 at pH 10.8 is consistent with this product distribution. At pH 1.5, the reaction is quite slow and yields intractable kinetics. At pH 4.5, the rates are much faster and deviate only slightly from pseudo-first-order behavior. With 2 mM PBN (N-phenyl-tert-butyl nitrone) present at pH 4.5, the reaction rate is about 20% less and shows excellent pseudo-first-order behavior, but the stoichiometric ratio is not significantly changed. The rates also display a significant specific cation effect. In the presence of spin-trap PBN, the kinetics were studied over the pH range 3.48-12.28, with [Na(+)] maintained at 0.09-0.10 M. The rate law is -d[Mo(V)]/dt = k[cysteine](tot)[Mo(V)], with k = {2(k(b)K(a1)K(a2)[H(+)] + k(c)K(a1)K(a2)K(a3))}/([H(+)](3) + K(a1)[H(+)](2) + K(a1)K(a2)[H(+)] + K(a1)K(a2)K(a3)), where K(a1), K(a2), and K(a3) are the successive acid dissociation constants of HSCH(2)CH(NH(3)(+))CO(2)H. Least-squares fitting yields k(b) = (7.1 +/- 0.4) x 10(4) M(-1) s(-1) and k(c) = (2.3 +/-0.2) x 10(4) M(-1) s(-1) at mu = 0.1 M (NaCF(3)SO(3)) and 25 degrees C. A mechanism is inferred in which k(b) and k(c) correspond to electron transfer to Mo(V) from the thiolate forms of anionic and dianionic cysteine.


Assuntos
Cisteína/química , Molibdênio/química , Compostos Organometálicos/química , Catálise , Cobre/química , Cistina/química , Concentração de Íons de Hidrogênio , Cinética , Oxirredução , Tirosina/química
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