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1.
J Agric Food Chem ; 72(23): 12967-12974, 2024 Jun 12.
Artigo em Inglês | MEDLINE | ID: mdl-38814790

RESUMO

Structure-activity relationships of diazinoyl nicotinic insecticides (diazinoyl isomers and 5- or 6-substituted pyrazin-2-oyl analogues) are considered in terms of affinity to the insect nicotinic acetylcholine receptor (nAChR) and insecticidal activity against the imidacloprid-resistant brown planthopper. Among the test compounds, 3-(6-chloropyridin-3-ylmethyl)-2-(pyrazinoyl)iminothiazoline shows the highest potency in nAChR affinity and insecticidal activity. Aplysia californica acetylcholine binding protein (AChBP) mutants (Y55W + Q57R and Y55W + Q57T) are utilized to compare molecular recognition of nicotinic insecticides with diverse pharmacophores. N-nitro- or N-cyanoimine imidacloprid or acetamiprid, respectively, exhibits a high affinity to these AChBP mutants at a similar potency level. Intriguingly, the pyrazin-2-oyl analogue has a higher affinity to AChBP Y55W + Q57R than that to Y55W + Q57T, thereby indicating that pyrazine nitrogen atoms contact Arg57 guanidinium and Trp55 indole NH. Furthermore, nicotine prefers AChBP Y55W + Q57T over Y55W + Q57R, conceivably suggesting that the protonated nicotine is repulsed by Arg57 guanidinium, consistent with its inferior potency to insect nAChR.


Assuntos
Hemípteros , Proteínas de Insetos , Inseticidas , Neonicotinoides , Receptores Nicotínicos , Animais , Inseticidas/química , Inseticidas/farmacologia , Receptores Nicotínicos/metabolismo , Receptores Nicotínicos/química , Receptores Nicotínicos/genética , Hemípteros/química , Hemípteros/genética , Hemípteros/efeitos dos fármacos , Hemípteros/metabolismo , Relação Estrutura-Atividade , Proteínas de Insetos/metabolismo , Proteínas de Insetos/genética , Proteínas de Insetos/química , Neonicotinoides/química , Neonicotinoides/farmacologia , Neonicotinoides/metabolismo , Nitrocompostos/química , Nitrocompostos/farmacologia , Nitrocompostos/metabolismo , Aplysia/química , Aplysia/metabolismo , Aplysia/genética , Nicotina/química , Nicotina/metabolismo , Nicotina/análogos & derivados , Nicotina/farmacologia
2.
Gen Comp Endocrinol ; 345: 114393, 2024 01 01.
Artigo em Inglês | MEDLINE | ID: mdl-37865149

RESUMO

Gonadotropin-releasing hormone (GnRH) superfamily comprises multiple families of signaling peptides in both protostomes and deuterostomes. Among this superfamily, vertebrate GnRH stimulates reproduction, but other GnRH superfamily members elicit diverse pleiotropic effects. Within the GnRH superfamily members, adipokinetic hormone (AKH) and its receptor are well described in ecdysozoans but understudied in other lineages. To fill this knowledge gap, we deorphanized a putative receptor for a lophotrochozoan AKH in a gastropod mollusk, Aplysia californica, and named it Aplca-AKHR. Phylogenetic analysis revealed an orthologous relationship of Aplca-AKHR with ecdysozoan AKHRs and other putative lophotrochozoan AKHRs. Aplca-AKHR bound specifically to the previously identified Aplca-AKH with high affinity and activated the inositol phosphate pathway. Aplca-AKHR was expressed widely among central and peripheral tissues, but most prominently in several central ganglia and the heart. The expression of Aplca-AKHR was downregulated by a hyposaline challenge, consistent with a role in volume and fluid regulation previously described for its ligand, Aplca-AKH. In summary, this is the first pairing of a lophotrochozoan AKH with its cognate receptor. Expression data further support diverse central and peripheral roles, including volume and fluid control, of this ligand/receptor pair.


Assuntos
Gastrópodes , Hormônios de Inseto , Animais , Aplysia/genética , Aplysia/metabolismo , Sequência de Aminoácidos , Gastrópodes/metabolismo , Filogenia , Ligantes , Hormônio Liberador de Gonadotropina/metabolismo , Hormônios de Inseto/metabolismo , Ácido Pirrolidonocarboxílico/metabolismo
3.
Sci Rep ; 13(1): 7662, 2023 05 11.
Artigo em Inglês | MEDLINE | ID: mdl-37169790

RESUMO

Neuropeptides are ubiquitous intercellular signaling molecules in the CNS and play diverse roles in modulating physiological functions by acting on specific G-protein coupled receptors (GPCRs). Among them, the elevenin signaling system is now believed to be present primarily in protostomes. Although elevenin was first identified from the L11 neuron of the abdominal ganglion in mollusc Aplysia californica, no receptors have been described in Aplysia, nor in any other molluscs. Here, using two elevenin receptors in annelid Platynereis dumerilii, we found three putative elevenin GPCRs in Aplysia. We cloned the three receptors and tentatively named them apElevR1, apElevR2, and apElevR3. Using an inositol monophosphate (IP1) accumulation assay, we demonstrated that Aplysia elevenin with the disulfide bond activated the three putative receptors with low EC50 values (ranging from 1.2 to 25 nM), supporting that they are true receptors for elevenin. In contrast, elevenin without the disulfide bond could not activate the receptors, indicating that the disulfide bond is required for receptor activity. Using alanine substitution of individual conserved residues other than the two cysteines, we showed that these residues appear to be critical to receptor activity, and the three different receptors had different sensitivities to the single residue substitution. Finally, we examined the roles of those residues outside the disulfide bond ring by removing these residues and found that they also appeared to be important to receptor activity. Thus, our study provides an important basis for further study of the functions of elevenin and its receptors in Aplysia and other molluscs.


Assuntos
Aplysia , Neuropeptídeos , Animais , Sequência de Aminoácidos , Aplysia/genética , Neuropeptídeos/química , Receptores Acoplados a Proteínas G/química , Dissulfetos
4.
Sci Rep ; 12(1): 1213, 2022 01 24.
Artigo em Inglês | MEDLINE | ID: mdl-35075137

RESUMO

Neuropeptides, as pervasive intercellular signaling molecules in the CNS, modulate a variety of behavioral systems in both protostomes and deuterostomes. Allatostatins are neuropeptides in arthropods that inhibit the biosynthesis of juvenile hormones. Based on amino acid sequences, they are divided into three different types in arthropods: allatostatin A, allatostatin B, allatostatin C. Allatostatin C (AstC) was first isolated from Manduca sexta, and it has an important conserved feature of a disulfide bridge formed by two cysteine residues. Moreover, AstC appears to be the ortholog of mammalian somatostatin, and it has functions in common with somatostatin, such as modulating feeding behaviors. The AstC signaling system has been widely studied in arthropods, but minimally studied in molluscs. In this study, we seek to identify the AstC signaling system in the marine mollusc Aplysia californica. We cloned the AstC precursor from the cDNA of Aplysia. We predicted a 15-amino acid peptide with a disulfide bridge, i.e., AstC, using NeuroPred. We then cloned two putative allatostatin C-like receptors and through NCBI Conserved Domain Search we found that they belonged to the G protein-coupled receptor (GPCR) family. In addition, using an inositol monophosphate 1 (IP1) accumulation assay, we showed that Aplysia AstC could activate one of the putative receptors, i.e., the AstC-R, at the lowest EC50, and AstC without the disulfide bridge (AstC') activated AstC-R with the highest EC50. Moreover, four molluscan AstCs with variations of sequences from Aplysia AstC but with the disulfide bridge activated AstC-R at intermediate EC50. In summary, our successful identification of the Aplysia AstC precursor and its receptor (AstC-R) represents the first example in molluscs, and provides an important basis for further studies of the AstC signaling system in Aplysia and other molluscs.


Assuntos
Aplysia/metabolismo , Neuropeptídeos/metabolismo , Sequência de Aminoácidos , Animais , Aplysia/genética , Células CHO , Cricetulus , Evolução Molecular , Neuropeptídeos/química , Neuropeptídeos/genética , Filogenia
5.
BMC Ecol Evol ; 21(1): 226, 2021 12 28.
Artigo em Inglês | MEDLINE | ID: mdl-34963462

RESUMO

BACKGROUND: The soft-bodied cladobranch sea slugs represent roughly half of the biodiversity of marine nudibranch molluscs on the planet. Despite their global distribution from shallow waters to the deep sea, from tropical into polar seas, and their important role in marine ecosystems and for humans (as targets for drug discovery), the evolutionary history of cladobranch sea slugs is not yet fully understood. RESULTS: To enlarge the current knowledge on the phylogenetic relationships, we generated new transcriptome data for 19 species of cladobranch sea slugs and two additional outgroup taxa (Berthella plumula and Polycera quadrilineata). We complemented our taxon sampling with previously published transcriptome data, resulting in a final data set covering 56 species from all but one accepted cladobranch superfamilies. We assembled all transcriptomes using six different assemblers, selecting those assemblies that provided the largest amount of potentially phylogenetically informative sites. Quality-driven compilation of data sets resulted in four different supermatrices: two with full coverage of genes per species (446 and 335 single-copy protein-coding genes, respectively) and two with a less stringent coverage (667 genes with 98.9% partition coverage and 1767 genes with 86% partition coverage, respectively). We used these supermatrices to infer statistically robust maximum-likelihood trees. All analyses, irrespective of the data set, indicate maximal statistical support for all major splits and phylogenetic relationships at the family level. Besides the questionable position of Noumeaella rubrofasciata, rendering the Facelinidae as polyphyletic, the only notable discordance between the inferred trees is the position of Embletonia pulchra. Extensive testing using Four-cluster Likelihood Mapping, Approximately Unbiased tests, and Quartet Scores revealed that its position is not due to any informative phylogenetic signal, but caused by confounding signal. CONCLUSIONS: Our data matrices and the inferred trees can serve as a solid foundation for future work on the taxonomy and evolutionary history of Cladobranchia. The placement of E. pulchra, however, proves challenging, even with large data sets and various optimization strategies. Moreover, quartet mapping results show that confounding signal present in the data is sufficient to explain the inferred position of E. pulchra, again leaving its phylogenetic position as an enigma.


Assuntos
Gastrópodes , Animais , Aplysia/genética , Ecossistema , Gastrópodes/genética , Humanos , Moluscos/genética , Filogenia , Transcriptoma/genética
6.
Sci Rep ; 11(1): 5478, 2021 03 09.
Artigo em Inglês | MEDLINE | ID: mdl-33750901

RESUMO

ATP and its ionotropic P2X receptors are components of the most ancient signaling system. However, little is known about the distribution and function of purinergic transmission in invertebrates. Here, we cloned, expressed, and pharmacologically characterized the P2X receptors in the sea slug Aplysia californica-a prominent neuroscience model. AcP2X receptors were successfully expressed in Xenopus oocytes and displayed activation by ATP with two-phased kinetics and Na+-dependence. Pharmacologically, they were different from other P2X receptors. The ATP analog, Bz-ATP, was a less effective agonist than ATP, and PPADS was a more potent inhibitor of the AcP2X receptors than the suramin. AcP2X were uniquely expressed within the cerebral F-cluster, the multifunctional integrative neurosecretory center. AcP2X receptors were also detected in the chemosensory structures and the early cleavage stages. Therefore, in molluscs, rapid ATP-dependent signaling can be implicated both in development and diverse homeostatic functions. Furthermore, this study illuminates novel cellular and systemic features of P2X-type ligand-gated ion channels for deciphering the evolution of neurotransmitters.


Assuntos
Trifosfato de Adenosina/metabolismo , Aplysia/metabolismo , Transdução de Sinais , Animais , Aplysia/citologia , Aplysia/genética , Modelos Moleculares , Neurônios/citologia , Neurônios/metabolismo , Filogenia , Receptores Purinérgicos P2X/análise , Receptores Purinérgicos P2X/genética , Receptores Purinérgicos P2X/metabolismo , Xenopus
7.
Mar Drugs ; 15(6)2017 Jun 02.
Artigo em Inglês | MEDLINE | ID: mdl-28574432

RESUMO

Egg lectins occur in a variety of animals ranging from mollusks to vertebrates. A few examples of molluscan egg lectins have been reported, including that of the sea hare Aplysia kurodai; however, their biological functions in the egg remain unclarified. We report the isolation, determination of primary structure, and possible functions of A.kurodai lectin (AKL) from the egg mass of A. kurodai. We obtained AKL as an inseparable mixture of isoproteins with a relative molecular mass of approximately 32 kDa by affinity purification. The hemagglutinating activity of AKL against rabbit erythrocytes was inhibited most potently by galacturonic acid and moderately by xylose. Nucleotide sequencing of corresponding cDNA obtained by rapid amplification of cDNA ends (RACE) allowed us to deduce complete amino acid sequences. The mature polypeptides consisted of 218- or 219-amino acids with three repeated domains. The amino acid sequence had similarities to hypothetical proteins of Aplysia spp., or domain DUF3011 of uncharacterized bacterial proteins. AKL is the first member of the DUF3011 family whose function, carbohydrate recognition, was revealed. Treatment of the egg with galacturonic acid, an AKL sugar inhibitor, resulted in deformation of the veliger larvae, suggesting that AKL is involved in organogenesis in the developmental stage of A. kurodai.


Assuntos
Aplysia/genética , Aplysia/metabolismo , Lebres/genética , Lebres/metabolismo , Ácidos Hexurônicos/metabolismo , Lectinas/genética , Lectinas/metabolismo , Sequência de Aminoácidos , Animais , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Sequência de Bases , DNA Complementar/genética , Eritrócitos/metabolismo , Coelhos
8.
Mar Biotechnol (NY) ; 19(1): 49-64, 2017 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-28150103

RESUMO

A new lectin from Aplysia dactylomela eggs (ADEL) was isolated by affinity chromatography on HCl-activated Sepharose™ media. Hemagglutination caused by ADEL was inhibited by several galactosides, mainly galacturonic acid (Ka = 6.05 × 106 M-1). The primary structure of ADEL consists of 217 residues, including 11 half-cystines involved in five intrachain and one interchain disulfide bond, resulting in a molecular mass of 57,228 ± 2 Da, as determined by matrix-assisted laser desorption/ionization time of flight mass spectrometry. ADEL showed high similarity with lectins isolated from Aplysia eggs, but not with other known lectins, indicating that these lectins could be grouped into a new family of animal lectins. Three glycosylation sites were found in its polypeptide backbone. Data from peptide-N-glycosidase F digestion and MS suggest that all oligosaccharides attached to ADEL are high in mannose. The secondary structure of ADEL is predominantly ß-sheet, and its tertiary structure is sensitive to the presence of ligands, as observed by CD. A 3D structure model of ADEL was created and shows two domains connected by a short loop. Domain A is composed of a flat three-stranded and a curved five-stranded ß-sheet, while domain B presents a flat three-stranded and a curved four-stranded ß-sheet. Molecular docking revealed favorable binding energies for interactions between lectin and galacturonic acid, lactose, galactosamine, and galactose. Moreover, ADEL was able to agglutinate and inhibit biofilm formation of Staphylococcus aureus, suggesting that this lectin may be a potential alternative to conventional use of antimicrobial agents in the treatment of infections caused by Staphylococcal biofilms.


Assuntos
Antibacterianos/química , Aplysia/química , Biofilmes/efeitos dos fármacos , Lectinas/química , Staphylococcus aureus/efeitos dos fármacos , Zigoto/química , Sequência de Aminoácidos , Animais , Antibacterianos/isolamento & purificação , Antibacterianos/metabolismo , Antibacterianos/farmacologia , Aplysia/genética , Aplysia/metabolismo , Biofilmes/crescimento & desenvolvimento , Escherichia coli/genética , Escherichia coli/metabolismo , Galactosídeos/farmacologia , Expressão Gênica , Testes de Inibição da Hemaglutinação , Ácidos Hexurônicos/farmacologia , Lectinas/genética , Lectinas/isolamento & purificação , Lectinas/farmacologia , Simulação de Acoplamento Molecular , Domínios Proteicos , Estrutura Secundária de Proteína , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/isolamento & purificação , Proteínas Recombinantes/farmacologia , Alinhamento de Sequência , Staphylococcus aureus/crescimento & desenvolvimento
9.
Mol Brain ; 9(1): 91, 2016 10 22.
Artigo em Inglês | MEDLINE | ID: mdl-27770822

RESUMO

Two pharmacologically distinct types of local protein synthesis are required for synapse- specific long-term synaptic facilitation (LTF) in Aplysia: one for initiation and the other for maintenance. ApCPEB, a rapamycin sensitive prion-like molecule regulates a form of local protein synthesis that is specifically required for the maintenance of the LTF. However, the molecular component of the local protein synthesis that is required for the initiation of LTF and that is sensitive to emetine is not known. Here, we identify a homolog of ApCPEB responsible for the initiation of LTF. ApCPEB4 which we have named after its mammalian CPEB4-like homolog lacks a prion-like domain, is responsive to 5-hydroxytryptamine, and is translated (but not transcribed) in an emetine-sensitive, rapamycin-insensitive, and PKA-dependent manner. The ApCPEB4 binds to different target RNAs than does ApCPEB. Knock-down of ApCPEB4 blocked the induction of LTF, whereas overexpression of ApCPEB4 reduces the threshold of the formation of LTF. Thus, our findings suggest that the two different forms of CPEBs play distinct roles in LTF; ApCPEB is required for maintenance of LTF, whereas the ApCPEB4, which lacks a prion-like domain, is required for the initiation of LTF.


Assuntos
Aplysia/fisiologia , Potenciação de Longa Duração/fisiologia , Príons/química , Proteínas de Ligação a RNA/química , Proteínas de Ligação a RNA/metabolismo , Homologia de Sequência de Aminoácidos , Sequência de Aminoácidos , Animais , Aplysia/genética , Sequência de Bases , Sistema Nervoso Central/fisiologia , Clonagem Molecular , Proteínas Quinases Dependentes de AMP Cíclico/metabolismo , Células HEK293 , Humanos , Neuritos/metabolismo , Fosforilação , Ligação Proteica , Domínios Proteicos , RNA/metabolismo , Serotonina/metabolismo , Transdução de Sinais
10.
PLoS One ; 9(8): e106014, 2014.
Artigo em Inglês | MEDLINE | ID: mdl-25162698

RESUMO

Increasing evidence suggests that gonadotropin-releasing hormone (GnRH), corazonin, adipokinetic hormone (AKH), and red pigment-concentrating hormone all share common ancestry to form a GnRH superfamily. Despite the wide presence of these peptides in protostomes, their biological effects remain poorly characterized in many taxa. This study had three goals. First, we cloned the full-length sequence of a novel AKH, termed Aplysia-AKH, and examined its distribution in an opisthobranch mollusk, Aplysia californica. Second, we investigated in vivo biological effects of Aplysia-AKH. Lastly, we compared the effects of Aplysia-AKH to a related A. californica peptide, Aplysia-GnRH. Results suggest that Aplysia-AKH mRNA and peptide are localized exclusively in central tissues, with abdominal, cerebral, and pleural ganglia being the primary sites of Aplysia-AKH production. However, Aplysia-AKH-positive fibers were found in all central ganglia, suggesting diverse neuromodulatory roles. Injections of A. californica with Aplysia-AKH significantly inhibited feeding, reduced body mass, increased excretion of feces, and reduced gonadal mass and oocyte diameter. The in vivo effects of Aplysia-AKH differed substantially from Aplysia-GnRH. Overall, the distribution and biological effects of Aplysia-AKH suggest it has diverged functionally from Aplysia-GnRH over the course of evolution. Further, that both Aplysia-AKH and Aplysia-GnRH failed to activate reproduction suggest the critical role of GnRH as a reproductive activator may be a phenomenon unique to vertebrates.


Assuntos
Aplysia/genética , Peso Corporal/efeitos dos fármacos , Comportamento Alimentar/efeitos dos fármacos , Gânglios dos Invertebrados/metabolismo , Oligopeptídeos/genética , RNA Mensageiro/genética , Sequência de Aminoácidos , Animais , Aplysia/efeitos dos fármacos , Aplysia/metabolismo , Sequência de Bases , Evolução Molecular , Gânglios dos Invertebrados/química , Gânglios dos Invertebrados/efeitos dos fármacos , Expressão Gênica , Hormônio Liberador de Gonadotropina/genética , Hormônio Liberador de Gonadotropina/metabolismo , Dados de Sequência Molecular , Oligopeptídeos/metabolismo , Oligopeptídeos/farmacologia , Oócitos/citologia , Oócitos/efeitos dos fármacos , Ácido Pirrolidonocarboxílico/análogos & derivados , Ácido Pirrolidonocarboxílico/metabolismo , RNA Mensageiro/metabolismo
11.
Learn Mem ; 21(4): 215-22, 2014 Apr 01.
Artigo em Inglês | MEDLINE | ID: mdl-24639488

RESUMO

Neurotrophins are critically involved in developmental processes such as neuronal cell survival, growth, and differentiation, as well as in adult synaptic plasticity contributing to learning and memory. Our previous studies examining neurotrophins and memory formation in Aplysia showed that a TrkB ligand is required for MAPK activation, long-term synaptic facilitation (LTF), and long-term memory (LTM) for sensitization. These studies indicate that neurotrophin-like molecules in Aplysia can act as key elements in a functionally conserved TrkB signaling pathway. Here we report that we have cloned and characterized a novel neurotrophic factor, Aplysia cysteine-rich neurotrophic factor (apCRNF), which shares classical structural and functional characteristics with mammalian neurotrophins. We show that apCRNF (1) is highly enriched in the CNS, (2) enhances neurite elongation and branching, (3) interacts with mammalian TrkB and p75(NTR), (4) is released from Aplysia CNS in an activity-dependent fashion, (5) facilitates MAPK activation in a tyrosine kinase dependent manner in response to sensitizing stimuli, and (6) facilitates the induction of LTF. These results show that apCRNF is a native neurotrophic factor in Aplysia that can engage the molecular and synaptic mechanisms underlying memory formation.


Assuntos
Aplysia/fisiologia , Potenciação de Longa Duração/fisiologia , Sistema de Sinalização das MAP Quinases/fisiologia , Fatores de Crescimento Neural/metabolismo , Sinapses/fisiologia , Sequência de Aminoácidos , Animais , Aplysia/genética , Crescimento Celular , Células Cultivadas , Sistema Nervoso Central/fisiologia , Clonagem Molecular , Lymnaea , Dados de Sequência Molecular , Neurônios Motores/fisiologia , Fatores de Crescimento Neural/genética , Proteínas do Tecido Nervoso , Neuritos/fisiologia , Proteínas Tirosina Quinases/metabolismo , Ratos , Receptores de Fatores de Crescimento , Receptores de Fator de Crescimento Neural/metabolismo , Células Receptoras Sensoriais/fisiologia , Especificidade da Espécie
12.
J Physiol Sci ; 64(2): 141-50, 2014 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-24415456

RESUMO

The FMRFamide-gated Na(+) channel (FaNaC) is a unique peptide-gated sodium channel and a member of the epithelial sodium channel/degenerin family. Previous studies have shown that an aspartate residue (Asp(552)) in the second transmembrane domain is involved in activation of the FaNaC. To examine the significance of a negative charge at position 552, we used a cysteine-modification method. Macroscopic currents of a cysteine mutant (D552C) were potentiated or inhibited by use of positively or negatively charged sulfhydryl reagents ([2-(trimethylammonium)ethyl]methanethiosulfonate bromide, MTSET, and sodium (2-sulfonatoethyl)methanethiosulfonate, MTSES, respectively). Dose-response analysis showed that treatment with MTSET increased the potency of the FMRFamide in the FaNaC whereas treatment with MTSES reduced the maximum response. Negative charge at position 552 was necessary for the characteristic inward rectification of the FaNaC. These results suggest that negative electric charge at position 552 is important to the activation and permeation properties of the FaNaC.


Assuntos
Aplysia/metabolismo , FMRFamida/farmacologia , Ativação do Canal Iônico , Proteínas do Tecido Nervoso/efeitos dos fármacos , Canais de Sódio/efeitos dos fármacos , Sódio/metabolismo , Animais , Aplysia/genética , Cisteína , Relação Dose-Resposta a Droga , Potenciais da Membrana , Mesilatos/farmacologia , Modelos Moleculares , Mutação , Proteínas do Tecido Nervoso/química , Proteínas do Tecido Nervoso/genética , Proteínas do Tecido Nervoso/metabolismo , Oócitos , Permeabilidade , Conformação Proteica , Canais de Sódio/química , Canais de Sódio/genética , Canais de Sódio/metabolismo , Eletricidade Estática , Propriedades de Superfície , Xenopus laevis
13.
Methods Mol Biol ; 1048: 247-84, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-23929110

RESUMO

RNA-seq or transcriptome analysis of individual cells and small-cell populations is essential for virtually any biomedical field. It is especially critical for developmental, aging, and cancer biology as well as neuroscience where the enormous heterogeneity of cells present a significant methodological and conceptual challenge. Here we present two methods that allow for fast and cost-efficient transcriptome sequencing from ultra-small amounts of tissue or even from individual cells using semiconductor sequencing technology (Ion Torrent, Life Technologies). The first method is a reduced representation sequencing which maximizes capture of RNAs and preserves transcripts' directionality. The second, a template-switch protocol, is designed for small mammalian neurons. Both protocols, from cell/tissue isolation to final sequence data, take up to 4 days. The efficiency of these protocols has been validated with single hippocampal neurons and various invertebrate tissues including individually identified neurons within a simpler memory-forming circuit of Aplysia californica and early (1-, 2-, 4-, 8-cells) embryonic and developmental stages from basal metazoans.


Assuntos
Aplysia/genética , Perfilação da Expressão Gênica/métodos , Análise de Sequência de RNA/métodos , Envelhecimento/genética , Animais , Aplysia/embriologia , Sequência de Bases , Genoma/genética , Hipocampo/citologia , Neurônios/citologia , Transcriptoma/genética
14.
Methods Mol Biol ; 1048: 323-52, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-23929113

RESUMO

Enormous heterogeneity in transcription and signaling is the feature that slows down progress in our understanding of the mechanisms of normal aging and age-related diseases. This is critical for neurobiology of aging where the enormous diversity of neuronal populations presents a significant challenge in experimental design. Here, we introduce Aplysia as a model for genomic analysis of aging at the single-cell level and provide protocols for integrated transcriptome and methylome profiling of individually identified neurons during the aging process. These single-cell RNA-seq and DNA methylation assays (methyl-capture/methyl enrichment) are compatible with all major next generation sequencing platforms (we used Roche/454 and SOLiD/Life Technologies as illustrative examples) and can be used to integrate an epigenetic signature with transcriptional output. The described sequencing library construction protocol provides both quantitative and directional information from transcriptional profiling of individual cells. Our results also confirm that different copies of DNA in polyploid Aplysia neurons behave similarly with respect to their DNA methylation.


Assuntos
Envelhecimento/genética , Metilação de DNA/genética , Epigenômica/métodos , Análise de Sequência de RNA/métodos , Transcriptoma/genética , Animais , Aplysia/genética , Sequência de Bases , Perfilação da Expressão Gênica , Sequenciamento de Nucleotídeos em Larga Escala , Neurônios/citologia
15.
Endocrinology ; 153(11): 5440-51, 2012 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-22977258

RESUMO

Glycoprotein hormones (GPHs) comprise a group of signaling molecules critical for major metabolic and reproductive functions. In vertebrates they include chorionic gonadotropin, LH, FSH, and TSH. The active hormones are characterized by heterodimerization between a common α and hormone-specific ß subunit, which activate leucine-rich repeat-containing G protein coupled receptors. To date, genes referred to as GPHα2 and GPHß5 have been the only glycoprotein hormone subunits identified in invertebrates, suggesting that other GPHα and GPHß subunits diversified during vertebrate evolution. Still the functions of GPHα2 and GPHß5 remain largely unknown for both vertebrates and invertebrates. To further understand the evolution and putative function of these subunits, we cloned and analyzed phylogenetically two glycoprotein subunits, AcaGPHα and AcaGPHß, from the sea hare Aplysia californica. Model based three-dimensional predictions of AcaGPHß confirm the presence of a complete cysteine knot, two hairpin loops, and a long loop. As in the human GPHß5 subunit the seatbelt structure is absent in AcaGPHß. We also found that AcaGPHα and AcaGPHß subunits are expressed in larval stages of Aplysia, and we present a detailed expression map of the subunits in the adult central nervous system using in situ hybridizations. Both subunits are expressed in subpopulations of pleural and buccal mechanosensory neurons, suggesting a neuronal modulatory function of these subunits in Aplysia. Furthermore it supports the model of a relatively diffuse neuroendocrine-like system in molluscs, where specific primary sensory neurons release peptides extrasynaptically (paracrine secretion). This is in contrast to vertebrates and insects, in which releasing and stimulating factor from centralized sensory regions of the central nervous system ultimately regulate hormone release in peripheral glands.


Assuntos
Aplysia/genética , Subunidade alfa de Hormônios Glicoproteicos/genética , Neurônios/metabolismo , Subunidades Proteicas/genética , Animais , Aplysia/metabolismo , Evolução Biológica , Clonagem Molecular , Expressão Gênica , Subunidade alfa de Hormônios Glicoproteicos/metabolismo , Sistemas Neurossecretores/fisiologia , Conformação Proteica , Subunidades Proteicas/metabolismo
16.
Comp Biochem Physiol C Toxicol Pharmacol ; 156(2): 95-103, 2012 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-22579997

RESUMO

Ferritin, an iron storage protein, plays a key role in iron metabolism in vivo. Here, we have cloned an inducible ferritin cDNA with 519 bp within the open reading frame fragment from the hepatopancreas of Aplysia juliana (AJ). The subunit sequence of the ferritin was predicted to be a polypeptide of 172 amino acids with a molecular mass of 19.8291kDa and an isoelectric point of 5.01. The cDNA sequence of hepatopancreas ferritin in AJ was constructed into a pET-32a system for expressing its relative protein efficiently in E. coli strain BL21, under isopropyl-ß-d-thiogalactoside induction. The recombinant ferritin, which was further purified on a Ni-NTA resin column and digested with enterokinase, was detected as a single subunit of approximately 20 kDa mass using both SDS-PAGE and mass spectrometry. The secondary structure and phosphorylation sites of the deduced amino acids were predicted using both ExPASy proteomic tools and the NetPhos 2.0 server, and the subunit space structure of the recombinant AJ ferritin (rAjFer) was built using a molecular operating environment software system. The result of in-gel digestion and identification using MALDI-TOF MS/MS showed that the recombinant protein was AjFer. ICP-MS results indicated that the rAjFer subunit could directly bind to cisplatin[cis-Diaminedichloroplatinum(CDDP)], giving approximately 17.6 CDDP/ferritin subunits and forming a novel CDDP-subunit. This suggests that a nanometer CDDP core-ferritin was constructed, which could be developed as a new anti-cancer drug. The flow cytometry results indicated that CDDP-rAjFer could induce Hela cell apoptosis. Results of the real-time PCR and Western blotting showed that the expression of AjFer mRNA was up-regulated in AJ under Cd(2+) stress. The recombinant AjFer protein should prove to be useful for further study of the structure and function of ferritin in Aplysia.


Assuntos
Aplysia/efeitos dos fármacos , Apoptose , Ferritinas/farmacologia , Hepatopâncreas/efeitos dos fármacos , Sequência de Aminoácidos , Animais , Antineoplásicos/farmacologia , Aplysia/genética , Aplysia/metabolismo , Sequência de Bases , Cádmio/farmacologia , Proliferação de Células/efeitos dos fármacos , Cisplatino/metabolismo , Cisplatino/farmacologia , Clonagem Molecular , DNA Complementar/genética , DNA Complementar/metabolismo , Ensaios de Seleção de Medicamentos Antitumorais , Eletroforese em Gel de Poliacrilamida , Escherichia coli/genética , Escherichia coli/metabolismo , Ferritinas/classificação , Ferritinas/genética , Ferritinas/metabolismo , Citometria de Fluxo , Regulação da Expressão Gênica , Células HeLa , Hepatopâncreas/metabolismo , Humanos , Ponto Isoelétrico , Isopropiltiogalactosídeo/metabolismo , Dados de Sequência Molecular , Peso Molecular , Fases de Leitura Aberta , Fosforilação , Filogenia , Ligação Proteica , Estrutura Secundária de Proteína , RNA Mensageiro/genética , RNA Mensageiro/metabolismo , Proteínas Recombinantes de Fusão/genética , Proteínas Recombinantes de Fusão/metabolismo , Proteínas Recombinantes de Fusão/farmacologia , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz/métodos
17.
Gen Comp Endocrinol ; 176(3): 321-6, 2012 May 01.
Artigo em Inglês | MEDLINE | ID: mdl-22172342

RESUMO

Several protostomian molecules that structurally resemble chordate gonadotropin-releasing hormone (GnRH) have been identified through cloning, biochemical purification or data mining. These molecules share considerable sequence and structural similarities with chordate GnRH, leading to the current belief that protostomian and chordate forms of GnRH share a common ancestor. However, the physiological significance of these protostomian GnRH-like molecules remains poorly understood. This knowledge gap hampers our understanding of how GnRH has evolved functionally over time. This review provides a summary of our recent functional characterization of a GnRH-like molecule (ap-GnRH) in a gastropod mollusk, Aplysia californica, and presents preliminary proof for a cognate ap-GnRH receptor (ap-GnRHR). Our data reveal that ap-GnRH is a general neural regulator capable of exerting diverse central and motor effects, but plays little or no role in reproductive activation. This notion is supported by the abundance of a putative ap-GnRHR transcript in the central nervous system and the foot. Comparing these results to the available functional data from a cephalopod mollusk, Octopus vulgaris, we surmise that protostomian GnRH-like molecules are likely to assume a wide range of physiological roles, and reproductive activation is not an evolutionarily conserved role of these molecules. Future functional studies using suitable protostomian models are required to identify functional changes in protostomian GnRH-like molecules that accompany major taxa-level transitions.


Assuntos
Aplysia/fisiologia , Sistema Nervoso Central/fisiologia , Evolução Molecular , Hormônio Liberador de Gonadotropina/fisiologia , Receptores LHRH/fisiologia , Sequência de Aminoácidos , Animais , Aplysia/genética , Hormônio Liberador de Gonadotropina/genética , Dados de Sequência Molecular , Filogenia , Receptores LHRH/genética , Alinhamento de Sequência
18.
J Biol Chem ; 286(6): 4420-8, 2011 Feb 11.
Artigo em Inglês | MEDLINE | ID: mdl-21115477

RESUMO

Covalent modification of α7 W55C nicotinic acetylcholine receptors (nAChR) with the cysteine-modifying reagent [2-(trimethylammonium)ethyl] methanethiosulfonate (MTSET(+)) produces receptors that are unresponsive to acetylcholine, whereas methyl methanethiolsulfonate (MMTS) produces enhanced acetylcholine-gated currents. Here, we investigate structural changes that underlie the opposite effects of MTSET(+) and MMTS using acetylcholine-binding protein (AChBP), a homolog of the extracellular domain of the nAChR. Crystal structures of Y53C AChBP show that MTSET(+)-modification stabilizes loop C in an extended conformation that resembles the antagonist-bound state, which parallels our observation that MTSET(+) produces unresponsive W55C nAChRs. The MMTS-modified mutant in complex with acetylcholine is characterized by a contracted C-loop, similar to other agonist-bound complexes. Surprisingly, we find two acetylcholine molecules bound in the ligand-binding site, which might explain the potentiating effect of MMTS modification in W55C nAChRs. Unexpectedly, we observed in the MMTS-Y53C structure that ten phosphate ions arranged in two rings at adjacent sites are bound in the vestibule of AChBP. We mutated homologous residues in the vestibule of α1 GlyR and observed a reduction in the single channel conductance, suggesting a role of this site in ion permeation. Taken together, our results demonstrate that targeted modification of a conserved aromatic residue in loop D is sufficient for a conformational switch of AChBP and that a defined region in the vestibule of the extracellular domain contributes to ion conduction in anion-selective Cys-loop receptors.


Assuntos
Acetilcolina/química , Aplysia/química , Proteínas de Transporte/química , Cisteína/química , Mutação de Sentido Incorreto , Acetilcolina/genética , Acetilcolina/metabolismo , Substituição de Aminoácidos , Animais , Aplysia/genética , Aplysia/metabolismo , Proteínas de Transporte/genética , Proteínas de Transporte/metabolismo , Cristalografia por Raios X , Cisteína/genética , Cisteína/metabolismo , Estabilidade Proteica , Estrutura Secundária de Proteína , Estrutura Terciária de Proteína
19.
Proc Natl Acad Sci U S A ; 107(35): 15607-12, 2010 Aug 31.
Artigo em Inglês | MEDLINE | ID: mdl-20702764

RESUMO

Calmodulin (CaM)-sensitive adenylyl cyclase (AC) in sensory neurons (SNs) in Aplysia has been proposed as a molecular coincidence detector during conditioning. We identified four putative ACs in Aplysia CNS. CaM binds to a sequence in the C1b region of AC-AplA that resembles the CaM-binding sequence in the C1b region of AC1 in mammals. Recombinant AC-AplA was stimulated by Ca(2+)/CaM. AC-AplC is most similar to the Ca(2+)-inhibited AC5 and AC6 in mammals. Recombinant AC-AplC was directly inhibited by Ca(2+), independent of CaM. AC-AplA and AC-AplC are expressed in SNs, whereas AC-AplB and AC-AplD are not. Knockdown of AC-AplA demonstrated that serotonin stimulation of cAMP-dependent plasticity in SNs is predominantly mediated by this CaM-sensitive AC. We propose that the coexpression of a Ca(2+)-inhibited AC in SNs, together with a Ca(2+)/CaM-stimulated AC, would enhance the associative requirement for coincident Ca(2+) influx and serotonin for effective stimulation of cAMP levels and initiation of plasticity mediated by AC-AplA.


Assuntos
Adenilil Ciclases/metabolismo , Plasticidade Neuronal/efeitos dos fármacos , Células Receptoras Sensoriais/efeitos dos fármacos , Serotonina/farmacologia , Potenciais de Ação/efeitos dos fármacos , Adenilil Ciclases/classificação , Adenilil Ciclases/genética , Sequência de Aminoácidos , Animais , Aplysia/citologia , Aplysia/genética , Aplysia/metabolismo , Cálcio/metabolismo , Cálcio/farmacologia , Calmodulina/metabolismo , Calmodulina/farmacologia , Clonagem Molecular , AMP Cíclico/metabolismo , AMP Cíclico/farmacologia , DNA Complementar/química , DNA Complementar/genética , Técnicas de Silenciamento de Genes , Immunoblotting , Dados de Sequência Molecular , Filogenia , Células Receptoras Sensoriais/citologia , Células Receptoras Sensoriais/metabolismo , Análise de Sequência de DNA , Homologia de Sequência de Aminoácidos , Serotoninérgicos/farmacologia
20.
Proc Natl Acad Sci U S A ; 106(34): 14634-9, 2009 Aug 25.
Artigo em Inglês | MEDLINE | ID: mdl-19706550

RESUMO

Serotonin (5-HT) plays a critical role in modulating synaptic plasticity in the marine mollusc Aplysia and in the mammalian nervous system. In Aplysia sensory neurons, 5-HT can activate several signal cascades, including PKA and PKC, presumably via distinct types of G protein-coupled receptors. However, the molecular identities of these receptors have not yet been identified. We here report the cloning and functional characterization of a 5-HT receptor that is positively coupled to adenylyl cyclase in Aplysia neurons. The cloned receptor, 5-HT(apAC1), stimulates the production of cAMP in HEK293T cells and in Xenopus oocytes. Moreover, the knockdown of 5-HT(apAC1) expression by RNA interference blocked 5-HT-induced cAMP production in Aplysia sensory neurons and blocked synaptic facilitation in nondepressed or partially depressed sensory-to-motor neuron synapses. These data implicate 5-HT(apAC1) as a major modulator of learning related synaptic facilitation in the direct sensory to motor neuron pathway of the gill withdrawal reflex.


Assuntos
Adenilil Ciclases/metabolismo , Aplysia/fisiologia , Pareamento Cromossômico/fisiologia , Aprendizagem/fisiologia , Receptores de Serotonina/fisiologia , Adenilil Ciclases/genética , Sequência de Aminoácidos , Animais , Aplysia/citologia , Aplysia/genética , Western Blotting , Linhagem Celular , Células Cultivadas , Clonagem Molecular , AMP Cíclico/metabolismo , Feminino , Humanos , Hibridização In Situ , Potenciais da Membrana , Dados de Sequência Molecular , Oócitos/metabolismo , Oócitos/fisiologia , Filogenia , Receptores de Serotonina/classificação , Receptores de Serotonina/genética , Células Receptoras Sensoriais/citologia , Células Receptoras Sensoriais/metabolismo , Análise de Sequência de DNA , Homologia de Sequência de Aminoácidos , Serotonina/farmacologia , Transfecção , Xenopus laevis
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