Your browser doesn't support javascript.
loading
Mostrar: 20 | 50 | 100
Resultados 1 - 20 de 572
Filtrar
1.
Glycoconj J ; 38(1): 1-11, 2021 02.
Artigo em Inglês | MEDLINE | ID: mdl-33547992

RESUMO

The prevalence of oral squamous cell carcinoma (OSCC) is high in South and Southeast Asia regions. Most OSCC patients are detected at advanced stages low 5-year survival rates. Aberrant expression of glycosylated proteins was found to be associated with malignant transformation and cancer progression. Hence, identification of cancer-associated glycoproteins could be used as potential biomarkers that are beneficial for diagnosis or clinical management of patients. This study aims to identify the differentially expressed glycoproteins using lectin-based glycoproteomics approaches. Serum samples of 40 patients with OSCC, 10 patients with oral potentially malignant disorder (OPMD), and 10 healthy individuals as control group were subjected to two-dimensional gel electrophoresis (2-DE) coupled with lectin Concanavalin A and Jacalin that specifically bind to N- and O-glycosylated proteins, respectively. Five differentially expressed N- and O-glycoproteins with various potential glycosylation sites were identified, namely N-glycosylated α1-antitrypsin (AAT), α2-HS-glycoprotein (AHSG), apolipoprotein A-I (APOA1), and haptoglobin (HP); as well as O-glycosylated AHSG and clusterin (CLU). Among them, AAT and APOA1 were further validated using enzyme-linked immunosorbent assay (ELISA) (n = 120). It was found that AAT and APOA1 are significantly upregulated in OSCC and these glycoproteins are independent risk factors of OSCC. The clinical utility of AAT and APOA1 as potential biomarkers of OSCC is needed for further evaluation.


Assuntos
Biomarcadores Tumorais/sangue , Carcinoma de Células Escamosas/sangue , Glicoproteínas/sangue , Neoplasias Bucais/sangue , Adulto , Idoso , Apolipoproteína A-I/sangue , Apolipoproteína A-I/metabolismo , Estudos de Casos e Controles , Cromatografia de Afinidade/métodos , Cromatografia em Agarose/métodos , Concanavalina A , Ensaio de Imunoadsorção Enzimática , Feminino , Glicoproteínas/metabolismo , Glicosilação , Humanos , Masculino , Espectrometria de Massas , Pessoa de Meia-Idade , Lectinas de Plantas/metabolismo , Lesões Pré-Cancerosas/sangue , Carcinoma de Células Escamosas de Cabeça e Pescoço , alfa 1-Antitripsina/sangue , alfa 1-Antitripsina/metabolismo
2.
Nat Biomed Eng ; 4(11): 1044-1052, 2020 11.
Artigo em Inglês | MEDLINE | ID: mdl-32690883

RESUMO

Efficient purification is crucial to providing large quantities of recombinant therapeutic proteins, such as monoclonal antibodies and cytokines. However, affinity techniques for manufacturing protein therapeutics that use biomolecule-conjugated agarose beads that harness specific biomolecular interactions suffer from issues related to protein denaturation, contamination and the need to maintain biomolecule-specific conditions for efficient protein capture. Here, we report a versatile and scalable method for the purification of recombinant protein therapeutics. The method exploits the high-affinity and controllable host-guest interactions between cucurbit[7]uril (CB[7]) and selected guests such as adamantylammonium. We show that the Herceptin (the brand name of trastuzumab, a monoclonal antibody drug used to treat breast cancer) and the much smaller cytokine interferon α-2a can be purified by site-specifically tagging them with adamantylammonium using the enzyme sortase A, followed by high-affinity binding with CB[7]-conjugated agarose beads and the recovery of the protein using a guest with a stronger affinity for CB[7]. The thermal and chemical stability of CB[7] beads and their scalability, recyclability and low cost may also make them advantageous for the manufacturing of biosimilars.


Assuntos
Cromatografia em Agarose/métodos , Interferon alfa-2/química , Interferon alfa-2/isolamento & purificação , Trastuzumab/química , Trastuzumab/isolamento & purificação , Hidrocarbonetos Aromáticos com Pontes/química , Humanos , Imidazóis/química
3.
Methods Mol Biol ; 2133: 327-341, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-32144675

RESUMO

Cyclotides are naturally occurring microproteins (≈30 residues long) present in several families of plants. All cyclotides share a unique head-to-tail circular knotted topology containing three disulfide bridges forming a cystine knot topology. Cyclotides possess high stability to chemical, physical, and biological degradation and have been reported to cross cellular membranes. In addition, naturally occurring and engineered cyclotides have shown to possess various pharmacologically relevant activities. These unique features make the cyclotide scaffold an excellent tool for the design of novel peptide-based therapeutics by using molecular evolution and/or peptide epitope grafting techniques. In this chapter, we provide protocols to recombinantly produce a natively folded cyclotide making use of a standard bacterial expression system in combination with an intein-mediated backbone cyclization with concomitant oxidative folding.


Assuntos
Clonagem Molecular/métodos , Ciclotídeos/biossíntese , Engenharia de Proteínas/métodos , Proteínas Recombinantes de Fusão/biossíntese , Cromatografia de Afinidade/métodos , Cromatografia em Agarose/métodos , Cromatografia Líquida de Alta Pressão , Ciclização , Ciclotídeos/química , Ciclotídeos/genética , Ciclotídeos/isolamento & purificação , Cistina/química , Motivos Nó de Cisteína , Dissulfetos/química , Dissulfetos/metabolismo , Eletroforese em Gel de Poliacrilamida , Escherichia coli/genética , Inteínas , Proteínas de Plantas/biossíntese , Proteínas de Plantas/química , Proteínas de Plantas/isolamento & purificação , Dobramento de Proteína , Processamento de Proteína Pós-Traducional , Proteínas Recombinantes de Fusão/química , Proteínas Recombinantes de Fusão/genética , Proteínas Recombinantes de Fusão/isolamento & purificação
4.
Molecules ; 23(8)2018 Jul 31.
Artigo em Inglês | MEDLINE | ID: mdl-30065200

RESUMO

A highly selective procedure to extract thiol-containing peptides (TCPs) from complicated soy glycinin hydrolysates (SGHs) was described. This procedure included the reduction of disulfide bonds by 1,4-dithiothreitol (DTT) and enrichment of TCPs through Thiopropyl-Sephrose 6B covalent chromatography. TCPs were confirmed using a strategy based on mass shift after differential alkylation of sulfhydryl groups with iodoacetamide and N-ethylmaleimide by matrix-assisted laser desorption ionization mass spectrometry (MALDI-TOF-MS). The antioxidant activities of TCPs were evaluated using chemical assays. DTT reduction increased the concentration of sulfhydryl groups from 1.8 µmol/g to 113.8 µmol/g. The efficiency of the extraction was improved by optimizing the loading of sample, extraction and desorption time and the content of desorption reagent. Both of the adsorption and desorption process were found to fit a pseudo-second order model. MALDI-TOF-MS showed that 36 of the 45 extracted peptides were TCPs. The EC50 of TCPs for DPPH, hydroxyl radical, and superoxide anion radical was 0.1, 1.49 and 0.084 mg/mL, respectively. The reducing power of TCPs (0.2 mg/mL) was of 0.375. These results suggest that the combination of DTT reduction and Thiopropyl-Sepharose 6B covalent chromatograph was a successful pathway to extract TCPs from SGHs and the TCPs could be used as potential antioxidants.


Assuntos
Antioxidantes/isolamento & purificação , Globulinas/química , Glycine max/química , Peptídeos/isolamento & purificação , Hidrolisados de Proteína/química , Proteínas de Soja/química , Compostos de Sulfidrila/química , Antioxidantes/química , Compostos de Bifenilo/antagonistas & inibidores , Cromatografia em Agarose/métodos , Ditiotreitol/química , Etilmaleimida/química , Radical Hidroxila/antagonistas & inibidores , Iodoacetamida/química , Peptídeos/química , Picratos/antagonistas & inibidores , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz , Superóxidos/antagonistas & inibidores
5.
Methods Mol Biol ; 1756: 187-194, 2018.
Artigo em Inglês | MEDLINE | ID: mdl-29600371

RESUMO

Liquid biopsy of cancers is an area of increasing interest in medical practice for the surveillance, management, and potential detection of malignant cells, using minimally invasive collection of body fluids. A liquid biopsy is particularly useful for metastatic cancers, which may be difficult to be sampled by core biopsy, due to difficulty of access or an occult location. Access to DNA shed from esophageal adenocarcinoma can enable the detection of mutations confirming the presence of malignant cells or the evolution of clonal lines with altered treatment response profiles. In this chapter, we detail a method for the isolation of cell-free DNA from blood plasma and DNA associated with exosomes in blood from patients with esophageal adenocarcinoma.


Assuntos
Adenocarcinoma/patologia , Biomarcadores Tumorais/isolamento & purificação , DNA Tumoral Circulante/isolamento & purificação , Neoplasias Esofágicas/patologia , Exossomos/patologia , Adenocarcinoma/sangue , Adenocarcinoma/genética , Biomarcadores Tumorais/sangue , Cromatografia em Agarose/instrumentação , Cromatografia em Agarose/métodos , DNA Tumoral Circulante/sangue , Análise Mutacional de DNA/instrumentação , Análise Mutacional de DNA/métodos , Neoplasias Esofágicas/sangue , Neoplasias Esofágicas/genética , Exossomos/genética , Humanos , Biópsia Líquida/instrumentação , Biópsia Líquida/métodos , Mutação
6.
J Virol ; 91(1)2017 Jan 01.
Artigo em Inglês | MEDLINE | ID: mdl-27795422

RESUMO

A recombinant strain HCV1 (hepatitis C virus [HCV] genotype 1a) gpE1/gpE2 (E1E2) vaccine candidate was previously shown by our group to protect chimpanzees and generate broad cross-neutralizing antibodies in animals and humans. In addition, recent independent studies have highlighted the importance of conserved neutralizing epitopes in HCV vaccine development that map to antigenic clusters in E2 or the E1E2 heterodimer. E1E2 can be purified using Galanthis nivalis lectin agarose (GNA), but this technique is suboptimal for global production. Our goal was to investigate a high-affinity and scalable method for isolating E1E2. We generated an Fc tag-derived (Fc-d) E1E2 that was selectively captured by protein G Sepharose, with the tag being removed subsequently using PreScission protease. Surprisingly, despite the presence of the large Fc tag, Fc-d E1E2 formed heterodimers similar to those formed by GNA-purified wild-type (WT) E1E2 and exhibited nearly identical binding profiles to HCV monoclonal antibodies that target conserved neutralizing epitopes in E2 (HC33.4, HC84.26, and AR3B) and the E1E2 heterodimer (AR4A and AR5A). Antisera from immunized mice showed that Fc-d E1E2 elicited anti-E2 antibody titers and neutralization of HCV pseudotype viruses similar to those with WT E1E2. Competition enzyme-linked immunosorbent assays (ELISAs) showed that antisera from immunized mice inhibited monoclonal antibody binding to neutralizing epitopes. Antisera from Fc-d E1E2-immunized mice exhibited stronger competition for AR3B and AR5A than the WT, whereas the levels of competition for HC84.26 and AR4A were similar. We anticipate that Fc-d E1E2 will provide a scalable purification and manufacturing process using protein A/G-based chromatography. IMPORTANCE: A prophylactic HCV vaccine is still needed to control this global disease despite the availability of direct-acting antivirals. Previously, we demonstrated that a recombinant envelope glycoprotein (E1E2) vaccine (genotype 1a) elicited cross-neutralizing antibodies from human volunteers. A challenge for isolating the E1E2 antigen is the reliance on GNA, which is unsuitable for large scale-up and global vaccine delivery. We have generated a novel Fc domain-tagged E1E2 antigen that forms functional heterodimers similar to those with native E1E2. Affinity purification and removal of the Fc tag from E1E2 resulted in an antigen with a nearly identical profile of cross-neutralizing epitopes. This antigen elicited anti-HCV antibodies that targeted conserved neutralizing epitopes of E1E2. Owing to the high selectivity and cost-effective binding capacity of affinity resins for capture of the Fc-tagged rE1E2, we anticipate that our method will provide a means for large-scale production of this HCV vaccine candidate.


Assuntos
Hepacivirus/imunologia , Anticorpos Anti-Hepatite C/biossíntese , Hepatite C/prevenção & controle , Proteínas Recombinantes de Fusão/biossíntese , Proteínas do Envelope Viral/biossíntese , Vacinas contra Hepatite Viral/imunologia , Animais , Anticorpos Monoclonais/biossíntese , Anticorpos Monoclonais/química , Anticorpos Neutralizantes/biossíntese , Anticorpos Neutralizantes/química , Antígenos Virais/química , Antígenos Virais/imunologia , Proteínas de Bactérias/química , Proteínas de Bactérias/isolamento & purificação , Cromatografia em Agarose/métodos , Reações Cruzadas , Epitopos/química , Epitopos/imunologia , Hepacivirus/química , Hepatite C/imunologia , Hepatite C/virologia , Anticorpos Anti-Hepatite C/química , Humanos , Soros Imunes/química , Fragmentos Fc das Imunoglobulinas/biossíntese , Fragmentos Fc das Imunoglobulinas/genética , Fragmentos Fc das Imunoglobulinas/isolamento & purificação , Camundongos , Testes de Neutralização , Dobramento de Proteína , Multimerização Proteica , Proteínas Recombinantes de Fusão/química , Proteínas Recombinantes de Fusão/genética , Proteínas Recombinantes de Fusão/isolamento & purificação , Vacinação , Vacinas Sintéticas , Proteínas do Envelope Viral/genética , Proteínas do Envelope Viral/isolamento & purificação , Vacinas contra Hepatite Viral/administração & dosagem , Vacinas contra Hepatite Viral/biossíntese
7.
J Enzyme Inhib Med Chem ; 31(2): 247-52, 2016.
Artigo em Inglês | MEDLINE | ID: mdl-25792501

RESUMO

In this study, an alternative purification method for human paraoxonase 1 (hPON1) enzyme was developed using two-step procedures, namely, ammonium sulfate precipitation and Sepharose-4B-L-tyrosine-3-aminophenantrene hydrophobic interaction chromatography. SDS-polyacrylamide gel electrophoresis of the enzyme indicates a single band with an apparent M(W) of 43 kDa. The enzyme was purified 219-fold with a final specific activity of 4,408,400 U/mg and a yield of 10%. Furthermore, we examined the in vitro effects of some anabolic compounds, such as zeranol, 17 ß-estradiol, diethylstilbestrol, oxytocin, and trenbolone on the enzyme activity to understand the better inhibitory properties of these molecules. The five anabolic compounds dose dependently decreased the activity of hPON1 with inhibition constants in the millimolar-micromolar range. The results show that these compounds exhibit inhibitory effects on hPON1 at low concentrations with IC50 values ranging from 0.064 to 16.900 µM.


Assuntos
Anabolizantes/farmacologia , Arildialquilfosfatase/isolamento & purificação , Arildialquilfosfatase/metabolismo , Anabolizantes/administração & dosagem , Arildialquilfosfatase/antagonistas & inibidores , Cromatografia em Agarose/métodos , Eletroforese em Gel de Poliacrilamida/métodos , Estradiol/farmacologia , Humanos , Interações Hidrofóbicas e Hidrofílicas , Concentração Inibidora 50 , Ocitocina/farmacologia , Acetato de Trembolona/farmacologia , Tirosina/química , Zeranol/farmacologia
8.
J Enzyme Inhib Med Chem ; 31(4): 546-50, 2016 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-26018419

RESUMO

Glutathione S-transferases (GSTs) are an important enzyme family which play a critical role in detoxification system. In our study, GST was purified from muscle tissue of Chalcalburnus tarichii Pallas with 301.5-fold purification and 19.07% recovery by glutathione agarose affinity chromatography. The purity of enzyme was checked by sodium dodecyl sulfate-polyacrylamide gel electrophoresis, showing a two band, because of having heterodimer structure. KM values were 1.59 and 0.53 mM for 1-chloro-2,4-dinitrobenzene (CDNB) and glutathione (GSH), respectively. Vmax values for CDNB and GSH were also determined as 5.58 and 1.88 EU/mL, respectively. In addition, inhibition effects of Ag(+), Cu(2+), Cd(2+), Fe(3+), Pb(2+), Cr(2+), Co(2+) and Zn(2+) metal ions were investigated on the enzyme activity and IC50, Ki values were calculated for these metal ions.


Assuntos
Cyprinidae , Glutationa Transferase/antagonistas & inibidores , Glutationa Transferase/metabolismo , Metais Pesados/farmacologia , Músculos/enzimologia , Animais , Cromatografia de Afinidade , Cromatografia em Agarose , Relação Dose-Resposta a Droga , Glutationa/química , Glutationa Transferase/isolamento & purificação , Concentração Inibidora 50 , Lagos , Relação Estrutura-Atividade
9.
Carbohydr Polym ; 125: 45-52, 2015 Jul 10.
Artigo em Inglês | MEDLINE | ID: mdl-25857958

RESUMO

Response surface methodology was used to optimize the extraction conditions of water-soluble polysaccharides from Stachys sieboldii Miq. tubers. A central composite design was used to optimize the extraction processing parameters. The optimum extraction conditions are as follows: extraction temperature, 95°C; extraction time, 2.5h; water to raw material ratio, 16; and extraction frequency, 3. Under the optimized conditions, an experimental yield of 9.21 ± 0.18%, which is in good agreement with the predicted yield, was obtained. Purified polysaccharide SSP II-a was successfully obtained using diethylaminoethanol-Sepharose and Sepharose CL-6B column chromatography. SSP II-a was found to be an acidic polysaccharide fraction with an average molecular weight of 168kDa and composed of rhamnose, glucuronic acid, galacturonic acid, glucose, galactose and arabinose. In vitro antioxidant activity assays suggested that SSP II-a presents high scavenging activity toward superoxide anion, hydroxyl, and 2,2'-azino-bis(3-ethylbenz-thiazoline-6-sulfonic acid) radicals but relatively lower scavenging activity toward 1,1-diphenyl-2-picrylhydrazyl radicals. The results indicated that response surface methodology is an effective method for the extraction of polysaccharides from S. sieboldii Miq. tubers and the polysaccharides could be explored as a potential antioxidant agent for use in medicine or functional food.


Assuntos
Sequestradores de Radicais Livres/química , Polissacarídeos/química , Extração em Fase Sólida/métodos , Stachys/química , Cromatografia em Agarose/métodos , Oxirredução
10.
Transfusion ; 55(8): 1919-26, 2015 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-25752773

RESUMO

BACKGROUND: Recent studies link biologic response modifiers found in donor platelet (PLT) concentrates to transfusion reactions. We tested a novel method to deplete BRMs from PLT concentrates using apheresis. STUDY DESIGN AND METHODS: Whole blood from 25 donors was treated to yield PLTs for in vitro measurements on Days 2, 5, and 7. On Day 7, PLTs were filtrated through columns with either antibody-coated agarose or rh-megalin bound to antibody-coated agarose. In addition, we also tested the naked matrix (agarose) and another apheresis surface containing rh-cubilin bound to agarose. Megalin and cubilin are parts of the protein complex mediating BRM endocytosis in the human kidney. RESULTS: Compared to before filtration (951 × 10(9) ± 41 × 10(9) cells/L), PLT numbers decreased slightly after filtration over both naked (859 × 10(9) ± 38 × 10(9) ) and antibody-coated (848 × 10(9) ± 41 × 10(9) ) matrices (both p < 0.001 vs. before). Concentrations of interleukin (IL)-1ß, IL-12 (p40), IL-12 (p70), and IL-7 all decreased by approximately 40% even in the absence of a recombinant surface. After filtration over rh-cubilin, but not rh-megalin, concentrations of IFN-γ, IL-1ß, tumor necrosis factor-α, IL-12, and IL-7 all further decreased by 30% to 50%. CONCLUSION: In a pilot study of in vitro apheresis to deplete BRMs, we found that cell numbers and function remained largely unaffected by filtration. Significant reductions in BRMs occurred already with agarose. However, apheresis with the multiligand receptor rh-cubilin was able to further decrease concentrations.


Assuntos
Buffy Coat/citologia , Plaquetas/efeitos dos fármacos , Cromatografia de Afinidade/métodos , Cromatografia em Agarose/métodos , Fatores Imunológicos/sangue , Técnicas de Imunoadsorção , Proteína-2 Relacionada a Receptor de Lipoproteína de Baixa Densidade/metabolismo , Plaquetoferese/métodos , Receptores de Superfície Celular/metabolismo , Anticorpos Imobilizados , Filtração , Humanos , Técnicas In Vitro , Interleucinas/sangue , Projetos Piloto , Proteínas Recombinantes
11.
Bol. micol. (Valparaiso En linea) ; 29(2): 35-45, dic. 2014. ilus, tab
Artigo em Espanhol | LILACS | ID: biblio-868789

RESUMO

Los líquenes son los hongos que establecen una relación simbiótica con un alga o cianobacteria. En esta simbiosis se producen por parte del hongo, una serie de metabolitos secundarios conocidos como sustancias liquénicas; las cuales presentan una marcada actividad antibiótica. En Cuba no se tienen antecedentes sobre estudios de metabolitos liquénicos por lo que se propone; evaluar el efecto fungicida de extractos liquénicos producidos por especies cubanas así como identificar sus metabolitos. Se emplearon líquenes de diferentes zonas del país (Parmotrema dilatatum, P. tinctorum, P. praesorediosum P. cristiferum, Ramalina americana, Cladonia ceratophylla y Cladonia portentosa spp. pacífica), a los cuales se les extrajo con acetona, las sustancias liquénicas almacenadas en el talo. Los extractos fueron probados contra los hongos fitopatógenos Rhizoctonia solani y Phythophtora nicotianae; por el método de envenenamiento del medio de cultivo agar papa dextrosa a concentraciones de: 0,01 por ciento; 0,03 por ciento y 0,07 por ciento. Se utilizó un control negativo de dimetilsufóxido al 0,07 por ciento y se determinaron los porcentajes de inhibición, cuyos resultados fueron analizados estadísticamente. Los metabolitos secundarios presentes en los extractos se identificaron por cromatografía de capa fina (TLC). Exceptuando el extracto liquénico de P. cristiferum, todos los demás mostraron más de un 50 por ciento de inhibición del crecimiento de ambos hongos a la concentración de 0,07 por ciento, mientras que a las restantes concentraciones los valores fueron variados con diferencias significativas con respecto al control. Se lograron identificar tres metabolitos liquénicos: metil 2‘-O- metilmicrofilinato, 4-O-Demetilmicrofilinico y el ácido ramaniloico.


Lichens are fungi that establish a symbiotic relationship with an alga or cyanobacterium. This symbiosis produced by the fungus, a series of secondary metabolites known as lichen substances; which show a strong antibiotic activity. In Cuba there is no background on the studies above lichen metabolites so it is proposed; evaluate the fungicidal activity of lichen extracts produced by Cuban species and to identify metabolites. Lichens from different areas of the country (Parmotrema dilatatum, P. tinctorum, P.praesorediosum, P. cristiferum, Ramalina americana, Cladonia ceratophylla and Cladonia portentosa spp. pacífica), to which it extracted with acetone, the lichen substances stored in tallus. The extracts were tested against the fungal pathogens Rhizoctonia solani and Phythophtora nicotianae; poisoning by the method of culture medium potato dextrose agar at concentrations of 0.01 percent; 0.03 percent and 0.07 percent. A negative control to 0.07 percent dimethylsulfoxide was used and the percentage of inhibition, the results were analyzed statistically determined. Secondary metabolites present in the extracts were identified by thin layer chromatography (TLC). Except P. cristiferum lichen extract, all others showed more than 50 percent growth inhibition of both fungi at concentration of 0.07 percent, while the remaining concentrations were varied values with significant differences from the control. Was made to identify three lichen metabolites metilmicrofilinato 2‘ methyl-O, 4-ODemetilmicrofilinico and ramaniloico acid.


Assuntos
Antígenos de Fungos/isolamento & purificação , Antígenos de Fungos/análise , Líquens/metabolismo , Líquens/química , Acetona , Ágar , Antifúngicos , Cuba , Meios de Cultura , Cromatografia em Agarose/métodos , Fungos/patogenicidade , Intoxicação
12.
Proc Natl Acad Sci U S A ; 111(21): 7618-23, 2014 May 27.
Artigo em Inglês | MEDLINE | ID: mdl-24821763

RESUMO

SMARCAL1, a DNA remodeling protein fundamental to genome integrity during replication, is the only gene associated with the developmental disorder Schimke immuno-osseous dysplasia (SIOD). SMARCAL1-deficient cells show collapsed replication forks, S-phase cell cycle arrest, increased chromosomal breaks, hypersensitivity to genotoxic agents, and chromosomal instability. The SMARCAL1 catalytic domain (SMARCAL1(CD)) is composed of an SNF2-type double-stranded DNA motor ATPase fused to a HARP domain of unknown function. The mechanisms by which SMARCAL1 and other DNA translocases repair replication forks are poorly understood, in part because of a lack of structural information on the domains outside of the common ATPase motor. In the present work, we determined the crystal structure of the SMARCAL1 HARP domain and examined its conformation and assembly in solution by small angle X-ray scattering. We report that this domain is conserved with the DNA mismatch and damage recognition domains of MutS/MSH and NER helicase XPB, respectively, as well as with the putative DNA specificity motif of the T4 phage fork regression protein UvsW. Loss of UvsW fork regression activity by deletion of this domain was rescued by its replacement with HARP, establishing the importance of this domain in UvsW and demonstrating a functional complementarity between these structurally homologous domains. Mutation of predicted DNA-binding residues in HARP dramatically reduced fork binding and regression activities of SMARCAL1(CD). Thus, this work has uncovered a conserved substrate recognition domain in DNA repair enzymes that couples ATP-hydrolysis to remodeling of a variety of DNA structures, and provides insight into this domain's role in replication fork stability and genome integrity.


Assuntos
DNA Helicases/química , DNA Helicases/metabolismo , Reparo do DNA/genética , Modelos Moleculares , Ácidos Nucleicos/metabolismo , Trifosfato de Adenosina/metabolismo , Animais , Cromatografia de Afinidade , Cromatografia em Agarose , Cromatografia em Gel , Cromatografia por Troca Iônica , Clonagem Molecular , Cristalização , DNA Helicases/biossíntese , Hidrólise , Funções Verossimilhança , Camundongos , Estrutura Terciária de Proteína , Espalhamento a Baixo Ângulo , Difração de Raios X
13.
Carbohydr Polym ; 104: 73-9, 2014 Apr 15.
Artigo em Inglês | MEDLINE | ID: mdl-24607162

RESUMO

YCP, an α-glucan from the mycelium of marine filamentous fungus Phoma herbarum YS4108, has great antitumor potential via enhancement of host immune through Toll-like receptor (TLR) 2 and TLR4 signaling. In the current study, YCP was coupled to EAH Sepharose 4B agarose beads to prepare the YCP-Sepharose affinity absorbent using 1-cyano-4-dimethylaminopyridinium tetrafluoroborate (CDAP) as the activating agent. An orthogonal experiment L9 (3)(4) was applied to optimize the coupling procedure, giving the optimal parameters as follows: molar ratio of CDAP to YCP of 1:2, CDAP-activation time of 5 min, gel volume of 0.1 mL, and gel-incubation time of 72 h, respectively. Scanning electron microscopy analysis indicated successfully preparation of YCP immobilized sepharose beads, while these beads essentially maintained biological properties of free YCP since they can interact with TLR2 and TLR4 specifically at comparable level. Collectively, our findings provide an alternative approach to immobilize carbohydrate-based molecules for studying the carbohydrate-protein interaction.


Assuntos
Cromatografia em Agarose/métodos , Sefarose/síntese química , Animais , Linfócitos B/química , Fungos/química , Ligantes , Camundongos , Camundongos Endogâmicos BALB C , Nitrilas/química , Compostos de Piridínio/química , Sefarose/química , Receptor 2 Toll-Like/análise , Receptor 4 Toll-Like/análise
14.
Turk Neurosurg ; 23(4): 464-9, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-24101265

RESUMO

AIM: The deletion polymorphism of the angiotensin-converting enzyme (ACE) genome causes neoplastic development in several organs by increasing the angiotensin 2 (A2) formation. In this study, we aimed to identify the ACE genome insertion/deletion polymorphism in pituitary adenomas and to compare it with the control group. MATERIAL AND METHODS: Patients operated for pituitary adenomas were included in the study. Genomic DNA was extracted from tumoral tissues and peripheral blood samples of the patients by using the Miller method. Primary sequence was selected via targeting the polymorphic region of intron 16 of ACE genome 17q23. DNA samples were multiplied by PCR using HACE3s and HACE3as primers. RESULTS: Twenty-one operated cases were studied. In the study group; 44 % of the patients were identified as D/D, 33% of them as I/D and 23% of them as I/I. In 60%, D allele was identified. According to immunohistochemical investigation, we found that 100% of the patients with Cushing adenoma were D/D alleles. CONCLUSION: Presence of high rate of ACE genome deletion in patients with pituitary adenoma and grade 3-4 patients suggest that ACE genome polymorphism can be a risk factor for the development of pituitary adenomas.


Assuntos
Deleção de Genes , Mutagênese Insercional/genética , Peptidil Dipeptidase A/genética , Neoplasias Hipofisárias/genética , Neoplasias Hipofisárias/patologia , Adolescente , Adulto , Idoso , Alelos , Criança , Cromatografia em Agarose , DNA/genética , Feminino , Frequência do Gene , Genótipo , Humanos , Imuno-Histoquímica , Masculino , Pessoa de Meia-Idade , Procedimentos Neurocirúrgicos , Neoplasias Hipofisárias/cirurgia , Reação em Cadeia da Polimerase , Polimorfismo Genético , Fatores de Risco , Adulto Jovem
15.
Artigo em Inglês | MEDLINE | ID: mdl-22780216

RESUMO

Prophenoloxidase (PPO) was purified from Galleria mellonella L. A 67-fold purification of the proenzyme with 352% yield was achieved by using a Sepharose 4B-L-tyrosine-p-amino benzoic acid affinity column. The purified enzyme was migrated as a single band on SDS-polyacrylamide gel electrophoresis. K(m) and V(max) values were 0.017 M and 1430.45 EU for catechol. Inhibition of PPO was investigated with inhibitors such as p-aminobenzoic acid, etyleneglycol, and ascorbic acid. Among them, ascorbic acid showed the strongest inhibitory activity with IC(50) value of 2.94 µM. The current paper represents new strategies for the biological control of the Galleria mellonella L. insect.


Assuntos
Catecol Oxidase/química , Cromatografia em Agarose/métodos , Inibidores Enzimáticos/química , Precursores Enzimáticos/química , Hemolinfa/enzimologia , Mariposas/enzimologia , Ácido 4-Aminobenzoico/química , Animais , Catecol Oxidase/isolamento & purificação , Eletroforese em Gel de Poliacrilamida , Precursores Enzimáticos/isolamento & purificação , Concentração de Íons de Hidrogênio , Controle de Insetos/métodos , Larva/enzimologia , Especificidade por Substrato , Temperatura , Tirosina/química
16.
Se Pu ; 29(6): 543-8, 2011 Jun.
Artigo em Chinês | MEDLINE | ID: mdl-22032166

RESUMO

Polybrominated diphenyl ethers (PBDEs) and dechlorane plus (DP) are two kinds of widely used organic flame retardants, and PBDE and DP residues have been found in both environment and biota. A method for the determination of 8 PBDEs and 2 DPs in fish and fish oil supplements was developed using auto gel permeation chromatography (GPC) coupled with gas chromatography-negative chemical ionization/mass spectrometry (GC-NCI/MS) in the selected ion-monitoring (SIM) mode on a 15 m capillary column. The sample added with BDE-77 and 13C12-BDE-209 as the internal standards was extracted using a Soxhlet extractor, and further purified by auto GPC and a multilayer silica gel column. The sample preparation procedure was optimized, and the characteristic ions and fragmentations of the analytes in NCI/MS were studied. The limits of detection (LODs, S/N = 3) ranged from 2.2 to 39.8 ng/kg. The average recoveries were between 71.1% and 121.4% at two spiked levels of 2 and 20 ng/g for both BDE-209 and DP and 0.2 and 2 ng/g for others with the relative standard deviations between 2.96% and 13.31%. The developed method has been successfully applied in the determination of PBDEs and DPs in several fish and fish oil supplements samples. The total PBDEs found ranged from 2.18 to 15.93 ng/g, and DP was not found. This method was validated to be accurate and sensitive for the trace analysis of PBDEs and DPs in the samples with fat.


Assuntos
Óleos de Peixe/análise , Produtos Pesqueiros/análise , Cromatografia Gasosa-Espectrometria de Massas/métodos , Éteres Difenil Halogenados/análise , Hidrocarbonetos Clorados/análise , Compostos Policíclicos/análise , Animais , Cromatografia em Agarose/métodos
17.
Zhongguo Zhong Yao Za Zhi ; 36(8): 1024-7, 2011 Apr.
Artigo em Chinês | MEDLINE | ID: mdl-21809577

RESUMO

OBJECTIVE: To investigate the chemical constituents of the branches and leaves of Polyalthia nemoralis. METHOD: The compounds were isolated and purified by silica gel, macroporous adsorption resin and Sephadex LH-20 column chromatographic methods. Their chemical structures were elucidated on the basis of physicochemical properties and spectral data. RESULT: Fourteen compounds were isolated and identified as syringic acid (1), 3-methoxy-4-hydroxycinnamic acid (2), vanillic acid (3), 4-hydroxybenzoic acid (4), mauritianin (5), (+)-xylopinidine (6), (+)-oblongine(7), (+)-tembetarine (8), eythritol (9), D-mannitol (10), ethyl-beta-D-glucopyranoside (11), (+)-magnoflorine (12), stepharanine (13), (2S, 4R)-4-hydroxy-2-piperidine-carboxylic acid (14), respectively. CONCLUSION: All the compounds were isolated from the genus Polyalthia for the first time; compounds 6 and 13 showed inhibitation activities against multi tumor cell lines.


Assuntos
Antineoplásicos Fitogênicos/química , Antineoplásicos Fitogênicos/farmacologia , Extratos Vegetais/química , Extratos Vegetais/farmacologia , Folhas de Planta/química , Caules de Planta/química , Polyalthia/química , Alcaloides/química , Alcaloides/isolamento & purificação , Alcaloides/farmacologia , Aporfinas/química , Aporfinas/isolamento & purificação , Aporfinas/farmacologia , Linhagem Celular Tumoral , Sobrevivência Celular/efeitos dos fármacos , Cromatografia em Agarose/métodos , Ácidos Cumáricos/química , Ácidos Cumáricos/isolamento & purificação , Ácidos Cumáricos/farmacologia , Ácido Gálico/análogos & derivados , Ácido Gálico/química , Ácido Gálico/isolamento & purificação , Ácido Gálico/farmacologia , Humanos , Quempferóis/química , Quempferóis/isolamento & purificação , Quempferóis/farmacologia , Parabenos/química , Parabenos/isolamento & purificação , Parabenos/farmacologia , Extratos Vegetais/isolamento & purificação , Ácido Vanílico/química , Ácido Vanílico/isolamento & purificação , Ácido Vanílico/farmacologia
18.
J Basic Microbiol ; 51(2): 220-9, 2011 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-21630504

RESUMO

An extracellular lethal toxin produced by Aeromonas hydrophila strain RT860715K originally isolated from diseased rainbow trout (Oncorhynchus mykiss) was purified by using Fast Protein Liquid Chromatography system with hydrophobic interaction chromatography and anion exchange columns. The toxin was a cysteine protease, inhibited by L-cysteine, iodoacetic acid, N-ethylamleimide, P-chloromercuibenzene-sulfonic acid and N-α-p-tosyl-1-lysine-chloromethyl ketone (TLCK), and showed maximal activity at pH 6.0. The molecular weight of the purified enzyme proved to be 94 kDa as estimated by SDS-PAGE. In addition, the toxin was also completely inhibited by HgCl2 but partially inhibited by ethylenediamine tetraacetic acid (EDTA) and CuCl2. Both the extracellular products of Aeromonas hydrophila RT860715K and the purified protease were lethal to rainbow trout (weighing 18 g) with LD50 values of 2.87 and 0.93 µg protein g-1 fish body weight, respectively. The addition of L-cysteine completely inhibited the lethal toxicity of the purified protease, indicating that this cysteine protease was a lethal toxin produced by the bacterium.


Assuntos
Aeromonas hydrophila/enzimologia , Toxinas Bacterianas/isolamento & purificação , Cisteína Proteases/isolamento & purificação , Doenças dos Peixes/microbiologia , Infecções por Bactérias Gram-Negativas/veterinária , Oncorhynchus mykiss , Aeromonas hydrophila/metabolismo , Animais , Toxinas Bacterianas/metabolismo , Toxinas Bacterianas/toxicidade , Cromatografia em Agarose/veterinária , Cromatografia por Troca Iônica/veterinária , Cisteína Proteases/metabolismo , Cisteína Proteases/toxicidade , Eletroforese em Gel de Poliacrilamida , Inibidores Enzimáticos/farmacologia , Infecções por Bactérias Gram-Negativas/microbiologia , Concentração de Íons de Hidrogênio , Dose Letal Mediana , Peso Molecular
20.
ASN Neuro ; 3(1): e00053, 2011 Mar 24.
Artigo em Inglês | MEDLINE | ID: mdl-21345173

RESUMO

The ability of an AEF (axolemma-enriched fraction) to influence the proliferation, survival and differentiation of OPC (oligodendrocyte progenitor cells) was evaluated. Following addition of AEF to cultured OPC, the AEF associated with the outer surface of OPC so that subsequent metabolic events were likely mediated by direct AEF-OPC contact. Addition of AEF to the cultured OPC resulted in a dose- and time-dependent increase in proliferation that was partially dependent on Akt (protein kinase B) and MAPK (mitogen-activated protein kinase) activation. The major mitogen in an AEF-SE (soluble 2.0 M NaCl extract of the AEF) was identified as aFGF (acidic fibroblast growth factor) and accounted for 50% of the mitogenicity. The remaining 50% of the mitogenicity had properties consistent with bFGF (basic fibroblast growth factor) but was not unequivocally identified. Under conditions that limit the survival of OPC in culture, AEF treatment prolonged the survival of the OPC. Antigenic and morphological examination of the AEF-treated OPC indicated that the AEF treatment helped the OPC survive in a more immature state. The potential downstream metabolic pathways potentially activated in OPC by AEF and the consequences of these activated pathways are discussed. The results of these studies are consistent with the view that direct contact of axons with OPC stimulates their proliferation and survival while preventing their differentiation.


Assuntos
Estruturas Celulares/metabolismo , Oligodendroglia/fisiologia , Células de Schwann/química , Células-Tronco/efeitos dos fármacos , Células-Tronco/fisiologia , Animais , Animais Recém-Nascidos , Contagem de Células/métodos , Diferenciação Celular/fisiologia , Proliferação de Células , Células Cultivadas , Cromatografia em Agarose/métodos , Temperatura Alta , Proteínas Quinases Ativadas por Mitógeno , Mitógenos/farmacologia , Neurônios/fisiologia , Proteínas Proto-Oncogênicas c-akt , Ratos , Ratos Sprague-Dawley , Células de Schwann/metabolismo , Células-Tronco/imunologia , Tripsina/farmacologia
SELEÇÃO DE REFERÊNCIAS
DETALHE DA PESQUISA