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1.
Proteins ; 89(5): 544-557, 2021 05.
Artigo em Inglês | MEDLINE | ID: mdl-33368595

RESUMO

The African clawed frog (Xenopus laevis) withstands prolonged periods of extreme whole-body dehydration that lead to impaired blood flow, global hypoxia, and ischemic stress. During dehydration, these frogs shift from oxidative metabolism to a reliance on anaerobic glycolysis. In this study, we purified the central glycolytic enzyme glyceraldehyde-3-phosphate dehydrogenase (GAPDH) to electrophoretic homogeneity and investigated structural, kinetic, subcellular localization, and post-translational modification properties between control and 30% dehydrated X. laevis liver. GAPDH from dehydrated liver displayed a 25.4% reduction in maximal velocity and a 55.7% increase in its affinity for GAP, as compared to enzyme from hydrated frogs. Under dehydration mimicking conditions (150 mM urea and 1% PEG), GAP affinity was reduced with a Km value 53.8% higher than controls. Frog dehydration also induced a significant increase in serine phosphorylation, methylation, acetylation, beta-N-acetylglucosamination, and cysteine nitrosylation, post-translational modifications (PTMs). These modifications were bioinformatically predicted and experimentally validated to govern protein stability, enzymatic activity, and nuclear translocation, which increased during dehydration. These dehydration-responsive protein modifications, however, did not appear to affect enzymatic thermostability as GAPDH melting temperatures remained unchanged when tested with differential scanning fluorimetry. PTMs could promote extreme urea resistance in dehydrated GAPDH since the enzyme from dehydrated animals had a urea I50 of 7.3 M, while the I50 from the hydrated enzyme was 5.3 M. The physiological consequences of these dehydration-induced molecular modifications of GAPDH likely suppress GADPH glycolytic functions during the reduced circulation and global hypoxia experienced in dehydrated X. laevis.


Assuntos
Proteínas de Anfíbios/química , Desidratação/metabolismo , Gliceraldeído 3-Fosfato/química , Gliceraldeído-3-Fosfato Desidrogenases/química , Fígado/enzimologia , Processamento de Proteína Pós-Traducional , Xenopus laevis/metabolismo , Acetilação , Proteínas de Anfíbios/isolamento & purificação , Proteínas de Anfíbios/metabolismo , Animais , Sítios de Ligação , Desidratação/fisiopatologia , Secas , Gliceraldeído 3-Fosfato/metabolismo , Gliceraldeído-3-Fosfato Desidrogenases/isolamento & purificação , Gliceraldeído-3-Fosfato Desidrogenases/metabolismo , Glicólise/fisiologia , Cinética , Fígado/química , Masculino , Metilação , Modelos Biológicos , Modelos Moleculares , Compostos Nitrosos/química , Compostos Nitrosos/metabolismo , Fosforilação , Polietilenoglicóis/química , Ligação Proteica , Conformação Proteica em alfa-Hélice , Conformação Proteica em Folha beta , Homologia Estrutural de Proteína , Especificidade por Substrato , Termodinâmica , Ureia/química
2.
Biofactors ; 44(6): 597-608, 2018 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-28753256

RESUMO

Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) is an energy metabolism-related enzyme, which generates NADH in glycolysis. Our previous study revealed a novel role of exogenous GAPDH in the amelioration of lipopolysaccharide (LPS)-induced sepsis-related, severe acute lung injury (ALI) in mice. Here, we show the effect of extracellular GAPDH on the physiological functions of macrophages, which play an important role in the onset of sepsis and ALI. GAPDH has no effect on cell viability, while it strongly suppressed cell adhesion, spreading, and phagocytic function of LPS-stimulated macrophages. GAPDH treatment significantly reduced tumor necrosis factor (TNF)-α, while it induced interleukin (IL)-10 production from LPS-stimulated macrophages in a dose-dependent manner. It is noteworthy that heat inactivation of GAPDH lost its immunomodulatory activity. Correspondingly, NADH significantly inhibited TNF-α and enhanced IL-10 production with elevation of both M1/M2 macrophage markers. These data suggest that extracellular GAPDH induces intermediate M1/M2 macrophages for termination of inflammation, partly through its enzyme activity for generation of NADH. © 2018 BioFactors, 44(6):597-608, 2018.


Assuntos
Gliceraldeído-3-Fosfato Desidrogenases/farmacologia , Fatores Imunológicos/farmacologia , Lipopolissacarídeos/antagonistas & inibidores , Ativação de Macrófagos/efeitos dos fármacos , NAD/farmacologia , Animais , Adesão Celular/efeitos dos fármacos , Proliferação de Células/efeitos dos fármacos , Sobrevivência Celular/efeitos dos fármacos , Relação Dose-Resposta a Droga , Expressão Gênica , Gliceraldeído-3-Fosfato Desidrogenases/genética , Gliceraldeído-3-Fosfato Desidrogenases/imunologia , Gliceraldeído-3-Fosfato Desidrogenases/isolamento & purificação , Fatores Imunológicos/genética , Fatores Imunológicos/imunologia , Fatores Imunológicos/isolamento & purificação , Interleucina-10/genética , Interleucina-10/imunologia , Lipopolissacarídeos/farmacologia , Camundongos , Músculo Esquelético/química , Músculo Esquelético/enzimologia , NAD/imunologia , NAD/metabolismo , Fagocitose/efeitos dos fármacos , Células RAW 264.7 , Coelhos , Fator de Necrose Tumoral alfa/genética , Fator de Necrose Tumoral alfa/imunologia
3.
Protein Expr Purif ; 137: 1-6, 2017 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-28625912

RESUMO

The goal of the present work was expression of human glyceraldehyde-3-phosphate dehydrogenase (hGAPDH) without additional tag constructions in E. coli cells and elaboration of the procedure for purification of untagged hGAPDH from the extract of the producer cells. We present a simple method for purification of untagged hGAPDH including ammonium sulfate fractionation and gel filtration on a G-100 Sephadex column. The method allows isolation of 2 mg of pure hGAPDH from 600 ml of cell culture (7 g of the cell biomass). The specific activity of the freshly purified hGAPDH constitutes 117 ± 5 µmol NADH/min per mg protein (pH 9.0, 22 °C), which is close to the specific activity of rabbit muscle glyceraldehyde-3-phosphate dehydrogenase determined under the same conditions and several times exceeds the specific activity of his-tagged GAPDH preparations. The high enzymatic activity suggests that the recombinant enzyme retains its native structure. The described procedure may be useful for researchers who need a preparation of native hGAPDH without admixture of misfolded forms for their investigations.


Assuntos
Escherichia coli/metabolismo , Expressão Gênica , Gliceraldeído-3-Fosfato Desidrogenases , Escherichia coli/química , Escherichia coli/genética , Gliceraldeído-3-Fosfato Desidrogenases/biossíntese , Gliceraldeído-3-Fosfato Desidrogenases/química , Gliceraldeído-3-Fosfato Desidrogenases/isolamento & purificação , Humanos , Proteínas Recombinantes/biossíntese , Proteínas Recombinantes/química , Proteínas Recombinantes/isolamento & purificação
4.
Protein Expr Purif ; 128: 36-41, 2016 12.
Artigo em Inglês | MEDLINE | ID: mdl-27501924

RESUMO

Chondroitinases (ChSases) are a family of polysaccharide lyases that can depolymerize high molecular weight chondroitin sulfate (CS) and dermatan sulfate (DS). In this study, glyceraldehyde-3-phosphate dehydrogenase (GAPDH), which is stably expressed in different cells like normal cells and cancer cells and the expression is relatively insensitive to experimental conditions, was expressed as a fusion protein with ChSase ABC I. Results showed that the expression level and enzyme activity of GAPDH-ChSase ABC I were about 2.2 and 3.0 times higher than those of ChSase ABC I. By optimization of fermentation conditions, higher productivity of ChSase ABC I was achieved as 880 ± 61 IU/g wet cell weight compared with the reported ones. The optimal temperature and pH of GAPDH-ChSase ABC I were 40 °C and 7.5, respectively. GAPDH-ChSase ABC I had a kcat/Km of 131 ± 4.1 L/µmol s and the catalytic efficiency was decreased as compared to ChSase ABC I. The relative activity of GAPDH-ChSase ABC I remained 89% after being incubated at 30 °C for 180 min and the thermostability of ChSase ABC I was enhanced by GAPDH when it was incubated at 30, 35, 40 and 45 °C.


Assuntos
Proteínas de Bactérias , Condroitina ABC Liase , Escherichia coli/metabolismo , Expressão Gênica , Gliceraldeído-3-Fosfato Desidrogenases , Proteus vulgaris/genética , Proteínas de Bactérias/biossíntese , Proteínas de Bactérias/genética , Proteínas de Bactérias/isolamento & purificação , Catálise , Condroitina ABC Liase/biossíntese , Condroitina ABC Liase/química , Condroitina ABC Liase/genética , Condroitina ABC Liase/isolamento & purificação , Estabilidade Enzimática , Escherichia coli/genética , Gliceraldeído-3-Fosfato Desidrogenases/biossíntese , Gliceraldeído-3-Fosfato Desidrogenases/química , Gliceraldeído-3-Fosfato Desidrogenases/genética , Gliceraldeído-3-Fosfato Desidrogenases/isolamento & purificação , Temperatura Alta , Proteus vulgaris/enzimologia , Proteínas Recombinantes de Fusão/biossíntese , Proteínas Recombinantes de Fusão/química , Proteínas Recombinantes de Fusão/genética , Proteínas Recombinantes de Fusão/isolamento & purificação
5.
J Biol Chem ; 289(8): 4989-99, 2014 Feb 21.
Artigo em Inglês | MEDLINE | ID: mdl-24375405

RESUMO

Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) is a multifunctional protein as well as a classic glycolytic enzyme, and its pleiotropic functions are achieved by various post-translational modifications and the resulting translocations to intracellular compartments. In the present study, GAPDH in the plasma membrane of BeWo choriocarcinoma cells displayed a striking acidic shift in two-dimensional electrophoresis after cell-cell fusion induction by forskolin. This post-translational modification was deamidation of multiple glutaminyl residues, as determined by molecular mass measurement and tandem mass spectrometry of acidic GAPDH isoforms. Transglutaminase (TG) inhibitors prevented this acidic shift and reduced cell fusion. Knockdown of the TG2 gene by short hairpin RNA reproduced these effects of TG inhibitors. Various GAPDH mutants with replacement of different numbers (one to seven) of Gln by Glu were expressed in BeWo cells. These deamidated mutants reversed the suppressive effect of wild-type GAPDH overexpression on cell fusion. Interestingly, the mutants accumulated in the plasma membrane, and this accumulation was increased according to the number of Gln/Glu substitutions. Considering that GAPDH binds F-actin via an electrostatic interaction and that the cytoskeleton is rearranged in trophoblastic cell fusion, TG2-dependent GAPDH deamidation was suggested to participate in actin cytoskeletal remodeling.


Assuntos
Amidas/metabolismo , Proteínas de Ligação ao GTP/metabolismo , Gliceraldeído-3-Fosfato Desidrogenases/metabolismo , Transglutaminases/metabolismo , Trofoblastos/citologia , Trofoblastos/enzimologia , Sequência de Aminoácidos , Fusão Celular , Linhagem Celular Tumoral , Inibidores Enzimáticos/farmacologia , Proteínas de Ligação ao GTP/antagonistas & inibidores , Técnicas de Silenciamento de Genes , Células Gigantes/citologia , Células Gigantes/efeitos dos fármacos , Células Gigantes/metabolismo , Ácido Glutâmico/metabolismo , Glutamina/metabolismo , Gliceraldeído-3-Fosfato Desidrogenases/química , Gliceraldeído-3-Fosfato Desidrogenases/isolamento & purificação , Humanos , Dados de Sequência Molecular , Proteínas Mutantes/metabolismo , Proteína 2 Glutamina gama-Glutamiltransferase , Processamento de Proteína Pós-Traducional/efeitos dos fármacos , Transglutaminases/antagonistas & inibidores , Trofoblastos/efeitos dos fármacos
6.
Exp Parasitol ; 132(4): 465-9, 2012 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-23058231

RESUMO

Giardia lamblia (G. lamblia) has a simple life cycle that alternates between a cyst and a trophozoite, and this parasite is an important human and animal pathogen. To increase our understanding of the molecular basis of the G. lamblia encystment, we have analyzed the soluble proteins expressed by trophozoites and cysts extracted from feces by quantitative proteomic analysis. A total of 63 proteins were identified by isobaric tags for relative and absolute quantitation (iTRAQ) labeling, and were categorized as cytoskeletal proteins, a cell-cycle-specific kinase, metabolic enzymes and stress resistance proteins. Importantly, we demonstrated that the expression of seven proteins differed significantly between trophozoites and cysts. In cysts, the expression of three proteins (one variable surface protein (VSP), ornithine carbamoyltransferase (OTC), ß-tubulin) increased, whereas the expression of four proteins (14-3-3 protein, α-tubulin, glyceraldehyde-3-phosphate dehydrogenase (GAPDH), protein disulfide isomerase 2 (PDI-2)) decreased significantly when compared with the levels of these proteins in trophozoites. The mRNA expression patterns of four of these proteins (OTC, α-tubulin, GAPDH, VSP) were similar to the expression levels of the proteins. These seven proteins appear to play an important role in the completion of the life cycle of G. lamblia.


Assuntos
Giardia lamblia/crescimento & desenvolvimento , Giardia lamblia/metabolismo , Estágios do Ciclo de Vida/fisiologia , Proteínas de Protozoários/metabolismo , Animais , Antígenos de Protozoários/genética , Antígenos de Protozoários/isolamento & purificação , Antígenos de Protozoários/metabolismo , Cães , Fezes/parasitologia , Expressão Gênica , Giardia lamblia/enzimologia , Gliceraldeído-3-Fosfato Desidrogenases/genética , Gliceraldeído-3-Fosfato Desidrogenases/isolamento & purificação , Gliceraldeído-3-Fosfato Desidrogenases/metabolismo , Proteínas de Membrana/genética , Proteínas de Membrana/isolamento & purificação , Proteínas de Membrana/metabolismo , Ornitina Carbamoiltransferase/genética , Ornitina Carbamoiltransferase/isolamento & purificação , Ornitina Carbamoiltransferase/metabolismo , Proteoma , Proteínas de Protozoários/genética , Proteínas de Protozoários/isolamento & purificação , Reação em Cadeia da Polimerase em Tempo Real , Transcrição Gênica , Trofozoítos/enzimologia , Trofozoítos/crescimento & desenvolvimento , Trofozoítos/metabolismo , Tubulina (Proteína)/genética , Tubulina (Proteína)/isolamento & purificação , Tubulina (Proteína)/metabolismo
7.
Oncol Rep ; 24(3): 677-85, 2010 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-20664973

RESUMO

Breast cancer is a major health burden, responsible for >10% of all cases of cancer worldwide. Advances in breast cancer diagnosis and treatment have contributed to an improved rate of survival, although mortality rates remains significantly high. The establishment of breast cancer cell lines is an important model for understanding biological processes involved in this disease and for identifying potential therapeutic targets. The novel human breast cancer cell lines, MACL-1 and MGSO-3, were used in this study to identify possible surface antigens by antibodies directed against two commercial breast cancer cell lines MCF-7 and MDA-MB-231. We purified a 37 kDa antigen by affinity chromatography from MDA-MB-231, and its N-terminal amino acid sequence was homologous to glyceraldehyde-3-phosphate dehydrogenase (GAPDH). Therefore, immunohistochemical experiments, using specific monoclonal antibodies, evidenced a co-localization of GAPDH and Na+/K+-ATPase on the surface of commercially available and recently established breast cancer cell lines. It is of note that Na+/K+-ATPase was used as a plasma membrane marker. This finding opens new perspectives for breast cancer diagnosis and treatment since GAPDH could be used as a biomarker or as a potential therapeutic target in breast cancer.


Assuntos
Antígenos de Neoplasias/isolamento & purificação , Biomarcadores Tumorais/isolamento & purificação , Neoplasias da Mama/enzimologia , Gliceraldeído-3-Fosfato Desidrogenases/isolamento & purificação , Proteínas de Membrana/isolamento & purificação , Neoplasias da Mama/imunologia , Neoplasias da Mama/patologia , Linhagem Celular Tumoral , Proliferação de Células , Forma Celular , Sobrevivência Celular , Cromatografia de Afinidade , Feminino , Humanos , Imuno-Histoquímica , Análise de Sequência de Proteína , ATPase Trocadora de Sódio-Potássio/isolamento & purificação
8.
Biochemistry (Mosc) ; 74(7): 717-27, 2009 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-19747091

RESUMO

Here we describe the purification of glyceraldehyde-3-phosphate dehydrogenase (GAPDH) from normal leukocytes of healthy subjects and leukocytes of chronic myeloid leukemia (CML) patients and from normal mouse muscle and sarcoma tissue. The data indicate that some properties of GAPDH of leukocytes of CML patients and sarcoma tissues are similar and also similar to those of EAC (Ehrlich ascites carcinoma) cellular GAPDH but distinctly different from those of the normal cellular GAPDH. Polyclonal antiserum raised against the 54 kDa subunit of EAC cell GAPDH strongly reacted with GAPDH of leukocytes of CML patients and sarcoma tissue GAPDH only and weakly reacted with GAPDH of normal leukocyte and normal muscle and a variety of other tissues of normal rats. Both the subunits of GAPDH of sarcoma tissues were partially sequenced from the N-terminus and compared with the known sequences of GAPDH. The altered properties of GAPDH of three different malignant sources might be common feature of all malignant cells, which is discussed in relation to glycolysis and malignant aberrations.


Assuntos
Gliceraldeído-3-Fosfato Desidrogenases/química , Gliceraldeído-3-Fosfato Desidrogenases/isolamento & purificação , Leucemia Mieloide/enzimologia , Sarcoma/enzimologia , Sequência de Aminoácidos , Animais , Células Cultivadas , Estabilidade Enzimática , Gliceraldeído-3-Fosfato Desidrogenases/metabolismo , Humanos , Cinética , Leucócitos/química , Leucócitos/enzimologia , Camundongos , Dados de Sequência Molecular , Peso Molecular , Músculos/química , Músculos/enzimologia , Ratos
9.
Physiol Plant ; 133(2): 211-28, 2008 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-18298409

RESUMO

Cytosolic NAD-dependent glyceraldehyde 3-P dehydrogenase (GAPDH; GapC; EC 1.2.1.12) catalyzes the oxidation of triose phosphates during glycolysis in all organisms, but additional functions of the protein has been put forward. Because of its reactive cysteine residue in the active site, it is susceptible to protein modification and oxidation. The addition of GSSG, and much more efficiently of S-nitrosoglutathione, was shown to inactivate the enzymes from Arabidopsis thaliana (isoforms GapC1 and 2), spinach, yeast and rabbit muscle. Inactivation was fully or at least partially reversible upon addition of DTT. The incorporation of glutathione upon formation of a mixed disulfide could be shown using biotinylated glutathione ethyl ester. Furthermore, using the biotin-switch assay, nitrosylated thiol groups could be shown to occur after treatment with nitric oxide donors. Using mass spectrometry and mutant proteins with one cysteine lacking, both cysteines (Cys-155 and Cys-159) were found to occur as glutathionylated and as nitrosylated forms. In preliminary experiments, it was shown that both GapC1 and GapC2 can bind to a partial gene sequence of the NADP-dependent malate dehydrogenase (EC 1.2.1.37; At5g58330). Transiently expressed GapC-green fluorescent protein fusion proteins were localized to the nucleus in A. thaliana protoplasts. As nuclear localization and DNA binding of GAPDH had been shown in numerous systems to occur upon stress, we assume that such mechanism might be part of the signaling pathway to induce increased malate-valve capacity and possibly other protective systems upon overreduction and initial formation of reactive oxygen and nitrogen species as well as to decrease and protect metabolism at the same time by modification of essential cysteine residues.


Assuntos
Proteínas de Arabidopsis/metabolismo , Arabidopsis/enzimologia , Citosol/efeitos dos fármacos , Citosol/enzimologia , Gliceraldeído-3-Fosfato Desidrogenase (Fosforiladora)/metabolismo , Gliceraldeído-3-Fosfato Desidrogenases/metabolismo , Compostos de Sulfidrila/farmacologia , Substituição de Aminoácidos , Animais , Arabidopsis/citologia , Arabidopsis/efeitos dos fármacos , Proteínas de Arabidopsis/química , Proteínas de Arabidopsis/isolamento & purificação , Núcleo Celular/efeitos dos fármacos , Núcleo Celular/enzimologia , Clonagem Molecular , Cisteína/metabolismo , DNA/metabolismo , Ativação Enzimática/efeitos dos fármacos , Glutationa/análogos & derivados , Glutationa/farmacologia , Gliceraldeído-3-Fosfato Desidrogenase (Fosforiladora)/química , Gliceraldeído-3-Fosfato Desidrogenase (Fosforiladora)/isolamento & purificação , Gliceraldeído-3-Fosfato Desidrogenases/química , Gliceraldeído-3-Fosfato Desidrogenases/isolamento & purificação , Peróxido de Hidrogênio/farmacologia , Isoenzimas/química , Isoenzimas/isolamento & purificação , Isoenzimas/metabolismo , Proteínas Mutantes/metabolismo , Oxirredução/efeitos dos fármacos , Ligação Proteica/efeitos dos fármacos , Protoplastos/efeitos dos fármacos , Protoplastos/enzimologia , Coelhos , S-Nitrosoglutationa/farmacologia , Análise de Sequência de DNA , Espectrometria de Massas por Ionização por Electrospray , Especificidade por Substrato/efeitos dos fármacos
10.
Biochim Biophys Acta ; 1770(5): 826-32, 2007 May.
Artigo em Inglês | MEDLINE | ID: mdl-17324518

RESUMO

Recently, a relationship between glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and the beta-amyloid precursor protein (betaAPP) in relationship with the pathogenesis of Alzheimer's disease (AD) has been suggested. Therefore, we studied the specific activity of GAPDH in the different animal models of AD: transgenic mice (Tg2576) and rats treated with beta-amyloid, or thiorphan, or lipopolysaccharides (LPS) and interferon gamma (INFgamma). We observed that GAPDH activity was significantly decreased in the brain samples from TG mice. The injection of beta-amyloid, or thiorphan, an inhibitor of neprilysin involved in beta-amyloid catabolism, in rat brains resulted in a pronounced reduction of the enzyme activity. The infusion of LPS and IFNgamma, which can influence the progression of the AD, significantly reduced the enzyme activity.


Assuntos
Doença de Alzheimer/metabolismo , Peptídeos beta-Amiloides/genética , Gliceraldeído-3-Fosfato Desidrogenases/metabolismo , Fragmentos de Peptídeos/genética , Telencéfalo/enzimologia , Telencéfalo/metabolismo , Doença de Alzheimer/patologia , Peptídeos beta-Amiloides/administração & dosagem , Peptídeos beta-Amiloides/metabolismo , Animais , Modelos Animais de Doenças , Inibidores Enzimáticos/administração & dosagem , Inibidores Enzimáticos/farmacologia , Gliceraldeído-3-Fosfato Desidrogenases/análise , Gliceraldeído-3-Fosfato Desidrogenases/genética , Gliceraldeído-3-Fosfato Desidrogenases/isolamento & purificação , Humanos , Bombas de Infusão , Injeções Intraventriculares , Interferon gama/administração & dosagem , Interferon gama/farmacologia , Lipopolissacarídeos/administração & dosagem , Lipopolissacarídeos/toxicidade , Masculino , Aprendizagem em Labirinto , Camundongos , Camundongos Transgênicos , Mutação , Neprilisina/antagonistas & inibidores , Fragmentos de Peptídeos/administração & dosagem , Fragmentos de Peptídeos/metabolismo , Ratos , Ratos Endogâmicos F344 , Tiorfano/administração & dosagem , Tiorfano/farmacologia
11.
Acta Crystallogr D Biol Crystallogr ; 62(Pt 3): 290-301, 2006 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-16510976

RESUMO

GAPDH (D-glyceraldehyde-3-phosphate dehydrogenase) is a multifunctional protein that is a target for the design of antitrypanosomatid and anti-apoptosis drugs. Here, the first high-resolution (1.75 Angstroms) structure of a human GAPDH is reported. The structure shows that the intersubunit selectivity cleft that has been leveraged in the design of antitrypanosomatid compounds is closed in human GAPDH. Modeling of an anti-trypanosomatid GAPDH inhibitor in the human GAPDH active site provides insights into the basis for the observed selectivity of this class of inhibitor. Moreover, the high-resolution data reveal a new feature of the cleft: water-mediated intersubunit hydrogen bonds that assist closure of the cleft in the human enzyme. The structure is used in a computational ligand-docking study of the small-molecule compound CGP-3466, which inhibits apoptosis by preventing nuclear accumulation of GAPDH. Plausible binding sites are identified in the adenosine pocket of the NAD(+)-binding site and in a hydrophobic channel located in the center of the tetramer near the intersection of the three molecular twofold axes. The structure is also used to build a qualitative model of the complex between GAPDH and the E3 ubiquitin ligase Siah1. The model suggests that the convex surface near GAPDH Lys227 interacts with a large shallow groove of the Siah1 dimer. These results are discussed in the context of the recently discovered NO-S-nitrosylation-GAPDH-Siah1 apoptosis cascade.


Assuntos
Gliceraldeído-3-Fosfato Desidrogenases/química , Sítios de Ligação , Clonagem Molecular , Feminino , Gliceraldeído-3-Fosfato Desidrogenases/isolamento & purificação , Humanos , Modelos Moleculares , Proteínas Nucleares/química , Proteínas Nucleares/isolamento & purificação , Oxepinas/farmacologia , Placenta/enzimologia , Conformação Proteica , Ubiquitina/química , Ubiquitina-Proteína Ligases/química , Ubiquitina-Proteína Ligases/isolamento & purificação , Difração de Raios X
12.
J Neurosci ; 24(35): 7614-22, 2004 Sep 01.
Artigo em Inglês | MEDLINE | ID: mdl-15342727

RESUMO

Protein phosphorylation is crucial for regulating synaptic transmission. We describe a novel mechanism for the phosphorylation of the GABA(A) receptor, which mediates fast inhibition in the brain. A protein copurified and coimmunoprecipitated with the phosphorylated receptor alpha1 subunit; this receptor-associated protein was identified by purification and microsequencing as the key glycolytic enzyme glyceraldehyde-3-phosphate dehydrogenase (GAPDH). Molecular constructs demonstrated that GAPDH directly phosphorylates the long intracellular loop of GABA(A) receptor alpha1 subunit at identified serine and threonine residues. GAPDH and the alpha1 subunit were found to be colocalized at the neuronal plasma membrane. In keeping with the GAPDH/GABA(A) receptor molecular association, glycolytic ATP produced locally at plasma membranes was consumed for this alpha1 subunit phosphorylation, possibly within a single macrocomplex. The membrane-attached GAPDH is thus a dual-purpose enzyme, a glycolytic dehydrogenase, and a receptor-associated kinase. In acutely dissociated cortical neurons, the rundown of the GABA(A) responses was essentially attributable to a Mg(2+)-dependent phosphatase activity, which was sensitive to vanadate but insensitive to okadaic acid or fluoride. Rundown was significantly reduced by the addition of GAPDH or its reduced cofactor NADH and nearly abolished by the addition of its substrate glyceraldehyde-3-phosphate (G3P). The prevention of rundown by G3P was abolished by iodoacetamide, an inhibitor of the dehydrogenase activity of GAPDH, indicating that the GABA(A) responses are maintained by a glycolysis-dependent phosphorylation. Our results provide a molecular mechanism for the direct involvement of glycolysis in neurotransmission.


Assuntos
Gliceraldeído-3-Fosfato Desidrogenases/fisiologia , Glicólise/fisiologia , Neurônios/efeitos dos fármacos , Processamento de Proteína Pós-Traducional/efeitos dos fármacos , Proteínas Serina-Treonina Quinases/fisiologia , Receptores de GABA-A/metabolismo , Transmissão Sináptica/efeitos dos fármacos , Difosfato de Adenosina/farmacologia , Sequência de Aminoácidos , Animais , Química Encefálica , Células COS , Bovinos , Membrana Celular/efeitos dos fármacos , Membrana Celular/enzimologia , Chlorocebus aethiops , Difosfatos/farmacologia , Gliceraldeído 3-Fosfato/farmacologia , Gliceraldeído-3-Fosfato Desidrogenases/antagonistas & inibidores , Gliceraldeído-3-Fosfato Desidrogenases/isolamento & purificação , Gliceraldeído-3-Fosfato Desidrogenases/farmacologia , Hipocampo/citologia , Iodoacetamida/farmacologia , Magnésio/farmacologia , Dados de Sequência Molecular , NAD/farmacologia , Neurônios/enzimologia , Fosforilação/efeitos dos fármacos , Mapeamento de Interação de Proteínas , Proteínas Serina-Treonina Quinases/antagonistas & inibidores , Proteínas Serina-Treonina Quinases/isolamento & purificação , Coelhos , Ratos , Ratos Sprague-Dawley , Receptores de GABA-A/genética , Proteínas Recombinantes de Fusão/metabolismo , Transmissão Sináptica/fisiologia , Transfecção
13.
Mol Microbiol ; 52(1): 133-40, 2004 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-15049816

RESUMO

The high-resolution two-dimensional protein gel electrophoresis technique combined with matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) was used to analyse the oxidative stress response in Staphylococcus aureus COL. Exponentially growing cells were supplemented with 100 mM H2O2 leading to a growth arrest lasting 30 min. The comparison of the two-dimensional pattern of cytoplasmic protein extracts of stressed and unstressed cells revealed only a few changes in the protein synthesis profile. However, the isoelectric points of Gap (glyceraldehyde-3-phosphate dehydrogenase), AhpC (alkylhydroperoxide reductase) and MvaS (HMG-CoA-synthase) changed strikingly. For analysis of the modification of Gap, tandem hybrid mass spectrometry (Q-Star) was used. The observed pI shift resulted from the oxidation to sulphonic acid of cysteine 151, which is crucial for catalytic activity. A drop in ATP and a complete inactivation of Gap was accompanied by the growth arrest. About 30 min after the addition of H2O2, the damaged Gap was still present, but a new protein spot at the original location became visible, representing the newly synthesized enzyme that is active again. This is accompanied by the restoration of Gap enzyme activity, ATP levels and recovery of growth. There is a strong correlation between growth, ATP level and Gap activity under oxidative stress conditions, indicating that the H2O2-triggered Gap inactivation might be one reason for growth arrest under these conditions. Our data indicate that the damaged Gap protein was not repaired.


Assuntos
Gliceraldeído-3-Fosfato Desidrogenases/metabolismo , Estresse Oxidativo/fisiologia , Staphylococcus aureus/enzimologia , Trifosfato de Adenosina/metabolismo , Proteínas de Bactérias/análise , Proteínas de Bactérias/isolamento & purificação , Domínio Catalítico , Coenzima A Ligases/química , Coenzima A Ligases/isolamento & purificação , Cisteína/metabolismo , Eletroforese em Gel Bidimensional , Regulação Bacteriana da Expressão Gênica , Gliceraldeído-3-Fosfato Desidrogenases/química , Gliceraldeído-3-Fosfato Desidrogenases/genética , Gliceraldeído-3-Fosfato Desidrogenases/isolamento & purificação , Peróxido de Hidrogênio/farmacologia , Hidroximetilglutaril-CoA Sintase , Ponto Isoelétrico , Oxidantes/farmacologia , Oxirredução , Peroxidases/química , Peroxidases/isolamento & purificação , Peroxirredoxinas , Proteoma/análise , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz , Staphylococcus aureus/efeitos dos fármacos , Staphylococcus aureus/metabolismo , Staphylococcus aureus/fisiologia , Transcrição Gênica
14.
Plant Physiol ; 133(4): 2081-8, 2003 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-14681537

RESUMO

Glyceraldehyde-3-phosphate dehydrogenases catalyze key steps in energy and reducing power partitioning in cells of higher plants. Phosphorylated non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN) present in heterotrophic cells of wheat (Triticum aestivum) was activated up to 3-fold by MgCl2. The effect was not observed with the non-phosphorylated enzyme found in leaves. The divalent cation also affected the response of the enzyme from endosperm and shoots to adenine nucleotides and inorganic pyrophosphate. Gel filtration chromatography, co-immunoprecipitation followed by immunostaining, and the use of a phosphopeptide containing a canonical binding motif showed that MgCl2 actually disrupted the interaction between GAPN and a 14-3-3 regulatory protein. After interaction with 14-3-3, phosphorylated GAPN exhibits a 3-fold lower Vmax and higher sensitivity to inhibition by ATP and pyrophosphate. Results suggest that GAPN is a target for regulation by phosphorylation, levels of divalent cations, and 14-3-3 proteins. The regulatory mechanism could be critical to maintain levels of energy and reductants in the cytoplasm of heterotrophic plant cells.


Assuntos
Gliceraldeído-3-Fosfato Desidrogenases/metabolismo , Triticum/metabolismo , Tirosina 3-Mono-Oxigenase/metabolismo , Proteínas 14-3-3 , Difosfato de Adenosina/metabolismo , Monofosfato de Adenosina/metabolismo , Trifosfato de Adenosina/metabolismo , Cátions Bivalentes/farmacologia , Células Cultivadas , Cromatografia em Gel , Difosfatos/metabolismo , Gliceraldeído-3-Fosfato Desidrogenases/isolamento & purificação , Cinética , Fosfoproteínas/metabolismo , Fosforilação , Proteínas de Plantas/metabolismo
15.
FEBS Lett ; 508(1): 75-9, 2001 Nov 09.
Artigo em Inglês | MEDLINE | ID: mdl-11707271

RESUMO

The soluble protein fraction of tobacco bright yellow 2 cells contained adenosine 3',5'-cyclic monophosphate (cAMP)-binding activity, detected with both a conventional binding assay and a surface plasmon resonance biosensor. A cAMP-agarose-based affinity purification procedure yielded three proteins which were identified by mass spectrometry as glyceraldehyde 3-phosphate dehydrogenase (GAPDH) and two nucleoside diphosphate kinases (NDPKs). This is the first report describing an interaction between cAMP and these proteins in higher plants. Our findings are discussed in view of the reported role of the interaction of cAMP with GAPDH and NDPK in animals and yeast. In addition, we provide a rapid method to isolate both proteins from higher plants.


Assuntos
AMP Cíclico/metabolismo , Gliceraldeído-3-Fosfato Desidrogenases/química , Nicotiana/enzimologia , Núcleosídeo-Difosfato Quinase/química , Animais , Fracionamento Celular , Linhagem Celular , Gliceraldeído-3-Fosfato Desidrogenases/isolamento & purificação , Gliceraldeído-3-Fosfato Desidrogenases/metabolismo , Isoenzimas/química , Isoenzimas/isolamento & purificação , Isoenzimas/metabolismo , Espectrometria de Massas , Núcleosídeo-Difosfato Quinase/isolamento & purificação , Núcleosídeo-Difosfato Quinase/metabolismo , Proteínas de Plantas/química , Proteínas de Plantas/isolamento & purificação , Proteínas de Plantas/metabolismo , Ressonância de Plasmônio de Superfície
16.
J Biol Chem ; 276(38): 35247-52, 2001 Sep 21.
Artigo em Inglês | MEDLINE | ID: mdl-11438534

RESUMO

Mass mapping analysis based on cyanylation and CN-induced cleavage indicates that the two cysteine residues in the C-terminal extension of the B subunit of the light-activated pea leaf chloroplast glyceraldehyde-3-phosphate dehydrogenase form a disulfide bond. No evidence was found for a disulfide bond in the A subunit, nor was there any indication of a second disulfide bond in the B subunit. The availability of the structure of the extended glyceraldehyde-3-phosphate dehydrogenase from the archaeon Sulfolobus solfataricus allows modeling of the B subunit. As modeled, the two cysteine residues in the extension are positioned to form an interdomain disulfide cross-link.


Assuntos
Cloroplastos/enzimologia , Dissulfetos/química , Gliceraldeído-3-Fosfato Desidrogenases/química , Sequência de Aminoácidos , Cromatografia Líquida de Alta Pressão , Gliceraldeído-3-Fosfato Desidrogenases/isolamento & purificação , Gliceraldeído-3-Fosfato Desidrogenases/metabolismo , Dados de Sequência Molecular , Oxirredução , Pisum sativum , Conformação Proteica , Homologia de Sequência de Aminoácidos , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz
17.
Mol Pharmacol ; 59(2): 367-74, 2001 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-11160874

RESUMO

To elucidate molecular mechanism(s) of cellular response to mercaptopurine, a widely used antileukemic agent, we assessed mercaptopurine (MP) sensitivity in mismatch repair (MMR) proficient and MMR deficient human acute lymphoblastic leukemia (ALL) cells. Sensitivity to thiopurine cytotoxicity was not dependent on MMR (i.e., MutSalpha) competence among six cell lines tested. Using electrophoretic mobility shift assay analysis, we found that the incubation of nuclear extracts from ALL cells with synthetic 34-mer DNA duplexes containing deoxythioguanosine (G(S)) within either G(S).T or G(S).C pairs, resulted in formation of a DNA-protein complex distinct from the DNA-MutSalpha complex and unaffected by ATP. Isolation and sequence analysis of proteins involved in this DNA-protein complex identified glyceraldehyde 3-phosphate dehydrogenase (GAPDH) as a component. Western blot analysis of nuclear extracts from a panel of human lymphoblastic leukemia cell lines revealed markedly different basal levels of GAPDH in nuclei, which was significantly related to thiopurine sensitivity (p = 0.001). Confocal analysis revealed markedly different intracellular distribution of GAPDH between nucleus and cytosol in six human ALL cell lines. Redistribution of GAPDH from cytosol to nucleus was evident after MP treatment. These findings indicate that a new DNA-protein complex containing GAPDH and distinct from known MMR protein-DNA complexes binds directly to thioguanylated DNA, suggesting that this may act as a sensor of structural alterations in DNA and serve as an interface between these DNA modifications and apoptosis.


Assuntos
Pareamento Incorreto de Bases , Reparo do DNA/fisiologia , Proteínas de Ligação a DNA/isolamento & purificação , Tionucleosídeos/metabolismo , Antimetabólitos Antineoplásicos/farmacologia , Núcleo Celular/metabolismo , Primers do DNA/química , Proteínas de Ligação a DNA/metabolismo , Ensaios de Seleção de Medicamentos Antitumorais , Gliceraldeído-3-Fosfato Desidrogenases/isolamento & purificação , Gliceraldeído-3-Fosfato Desidrogenases/metabolismo , Humanos , Mercaptopurina/farmacologia , Leucemia-Linfoma Linfoblástico de Células Precursoras/enzimologia , Leucemia-Linfoma Linfoblástico de Células Precursoras/patologia , Tioguanina/química , Células Tumorais Cultivadas
18.
J Biol Chem ; 276(4): 2480-6, 2001 Jan 26.
Artigo em Inglês | MEDLINE | ID: mdl-11035021

RESUMO

Protein transport in the early secretory pathway requires Rab2 GTPase. This protein promotes the recruitment of soluble components that participate in protein sorting and recycling from pre-Golgi intermediates (vesicular tubular clusters (VTCs)). We previously reported that a constitutively activated form of Rab2 (Q65L) as well as Rab2 wild type promoted vesicle formation from VTCs. These vesicles contained Rab2, beta-COP, p53/gp58, and protein kinase Ciota/lambda but lacked anterograde-directed cargo. To identify other candidate Rab2 effectors, the polypeptide composition of the vesicles was further analyzed. We found that vesicles released in response to Rab2 also contained the glycolytic enzyme glyceraldehyde-3-phosphate dehydrogenase (GAPDH). To study the relationship of this enzyme to Rab2 function, we performed a quantitative binding assay to measure recruitment of GAPDH to membrane when incubated with Rab2. Rab2-treated microsomes showed a 5-10-fold increase in the level of membrane-associated GAPDH. We generated an affinity-purified anti-GAPDH polyclonal to study the biochemical role of GAPDH in the early secretory pathway. The antibody arrests transport of a reporter molecule in an assay that reconstitutes ER to Golgi traffic. Furthermore, the affinity-purified antibody blocked the ability of Rab2 to recruit GAPDH to membrane. However, the antibody did not interfere with Rab2 stimulated vesicle release. These data suggest that GAPDH is required for ER to Golgi transport. We propose that membranes incubated with anti-GAPDH and Rab2 form "dead end" vesicles that are unable to transport and fuse with the acceptor compartment.


Assuntos
Gliceraldeído-3-Fosfato Desidrogenases/metabolismo , Membranas Intracelulares/metabolismo , Organelas/metabolismo , Transporte Proteico , Sequência de Aminoácidos , Animais , Linhagem Celular , Proteína Coatomer/isolamento & purificação , Retículo Endoplasmático/metabolismo , Gliceraldeído-3-Fosfato Desidrogenases/isolamento & purificação , Complexo de Golgi/metabolismo , Membranas Intracelulares/enzimologia , Microssomos/metabolismo , Dados de Sequência Molecular , Ligação Proteica , Ratos , Proteína rab2 de Ligação ao GTP/metabolismo
19.
Z Naturforsch C J Biosci ; 56(11-12): 1166-8, 2001.
Artigo em Inglês | MEDLINE | ID: mdl-11837674

RESUMO

Glyceraldehyde-3-phosphate dehydrogenase is a glycolytic enzyme that catalyses conversion of glyceraldehyde-3-phosphate to 1,3-diphosphoglycerate. ATP has been found to have an inhibitory effect on this enzyme. To establish the interaction between the enzyme and ATP, a fluorescence technique was used. Fluorescence quenching in the presence of ATP suggests cooperative binding of ATP to the enzyme (the Hill obtained coefficient equals 2.78). The interaction between glyceraldehyde-3-phosphate dehydrogenase and ATP may control not only glycolysis but other activities of this enzyme, such as binding to the cytoskeleton.


Assuntos
Gliceraldeído-3-Fosfato Desidrogenases/metabolismo , Miocárdio/enzimologia , Trifosfato de Adenosina/metabolismo , Animais , Bovinos , Cromatografia por Troca Iônica , Gliceraldeído-3-Fosfato Desidrogenases/química , Gliceraldeído-3-Fosfato Desidrogenases/isolamento & purificação , Cinética , Músculos Papilares/enzimologia , Espectrometria de Fluorescência
20.
Rapid Commun Mass Spectrom ; 14(3): 161-7, 2000.
Artigo em Inglês | MEDLINE | ID: mdl-10637422

RESUMO

The field of proteomics involves the combined application of advanced separation techniques, mass spectrometry, and bioinformatics tools to characterize proteins in complex biological mixtures. Here we report the identification of nine proteins from the human pituitary proteome, using the proteomics approach. The pituitary proteins were separated by two-dimensional electrophoresis, and were visualized by silver staining. The proteins of interest were subjected to in-gel digestion with trypsin, and the masses of the resulting peptides were determined by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. This tryptic mass map was used to identify the proteins through a search of a protein-sequence database. The identified proteins include important hormones, and enzymes with various catalytic activities. These proteins will be used to construct a two-dimensional reference database of the human pituitary. This database will be employed to study changes in the pituitary proteome that are associated with the formation of pituitary tumors.


Assuntos
Espectrometria de Massas , Hipófise/química , Proteínas/análise , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz , Bases de Dados Factuais , Eletroforese em Gel Bidimensional , Feminino , Expressão Gênica , Glutationa Transferase/análise , Glutationa Transferase/isolamento & purificação , Gliceraldeído-3-Fosfato Desidrogenases/análise , Gliceraldeído-3-Fosfato Desidrogenases/isolamento & purificação , Hemoglobinas/análise , Hemoglobinas/isolamento & purificação , Humanos , Pessoa de Meia-Idade , Fragmentos de Peptídeos/análise , Fragmentos de Peptídeos/isolamento & purificação , Hormônios Hipofisários/análise , Hormônios Hipofisários/isolamento & purificação , Pró-Opiomelanocortina/análise , Pró-Opiomelanocortina/isolamento & purificação , Proteínas/isolamento & purificação , Coloração pela Prata , Tioléster Hidrolases/análise , Tioléster Hidrolases/isolamento & purificação , Ubiquitina Tiolesterase
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