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1.
Toxins (Basel) ; 14(12)2022 11 22.
Artigo em Inglês | MEDLINE | ID: mdl-36548713

RESUMO

Gossypol is a polyphenolic toxic secondary metabolite derived from cotton. Free gossypol in cotton meal is remarkably harmful to animals. Furthermore, microbial degradation of gossypol produces metabolites that reduce feed quality. We adopted an enzymatic method to degrade free gossypol safely and effectively. We cloned the gene cce001a encoding carboxylesterase (CarE) into pPICZαA and transformed it into Pichia pastoris GS115. The target protein was successfully obtained, and CarE CCE001a could effectively degrade free gossypol with a degradation rate of 89%. When esterase was added, the exposed toxic groups of gossypol reacted with different amino acids and amines to form bound gossypol, generating substances with (M + H) m/z ratios of 560.15, 600.25, and 713.46. The molecular formula was C27H28O13, C34H36N2O6, and C47H59N3O3. The observed instability of the hydroxyl groups caused the substitution and shedding of the group, forming a substance with m/z of 488.26 and molecular formula C31H36O5. These properties render the CarE CCE001a a valid candidate for the detoxification of cotton meal. Furthermore, the findings help elucidate the degradation process of gossypol in vitro.


Assuntos
Carboxilesterase , Gossipol , Mariposas , Animais , Carboxilesterase/genética , Carboxilesterase/metabolismo , Gossipol/metabolismo , Mariposas/enzimologia , Pichia/enzimologia , Pichia/genética , Biotransformação , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo
2.
Appl Microbiol Biotechnol ; 104(4): 1595-1607, 2020 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-31879825

RESUMO

Sugar beet pulp is an agricultural processing residue that is a rich source of the cell wall polysaccharide arabinan. Functional oligosaccharides, specifically feruloylated arabino-oligosaccharides (FAOs), can be isolated from sugar beet pulp through selective action by endo-arabinanase (glycoside hydrolase family 43). This study aimed to develop yeast (Pichia pastoris) as an efficient, eukaryotic platform to produce a thermophilic endo-1,5-α-L-arabinanase (TS-ABN) for extracting FAOs from sugar beet pulp. Recombinant TS-ABN was secreted into yeast culture medium at a yield of ~ 80 mg/L, and the protein exhibited specific enzyme activity, pH and temperature optimum, and thermostability comparable to those of the native enzyme. Treatment of sugar beet pulp with Pichia-secreted TS-ABN released FAOs recovered by hydrophobic chromatography at 1.52% (w/w). The isolated FAOs averaged seven arabinose residues per ferulic acid, and treatment of T84 human colon epithelial cells significantly increased expression of two key tight junction-related proteins-zonula occludens-1 and occludin-in a dose-dependent manner. This research establishes a biochemical platform for utilizing sugar beet pulp to produce value-added bioproducts with potential nutraceutical applications.


Assuntos
Beta vulgaris/química , Glicosídeo Hidrolases/biossíntese , Oligossacarídeos/química , Pichia/enzimologia , Temperatura , Linhagem Celular , Colo , Estabilidade Enzimática , Células Epiteliais/efeitos dos fármacos , Glicosídeo Hidrolases/genética , Humanos , Concentração de Íons de Hidrogênio , Ocludina/genética , Proteínas Recombinantes/biossíntese , Proteínas Recombinantes/genética , Proteína da Zônula de Oclusão-1/genética
3.
Biotechnol Appl Biochem ; 67(5): 714-722, 2020 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-31498481

RESUMO

Oil palm empty fruit bunch (OPEFB) is a lignocellulosic biomass generated in palm oil mills. It is a sustainable resource for fuels and chemicals. In this study, OPEFB was converted to ethanol by an integrative OPEFB conversion process including dilute alkaline pretreatment, cellulolytic enzyme production, separate OPEFB hydrolysis, and cofermentation using a hybrid xylose-fermenting yeast. OPEFB was pretreated using 1% (w/v) NaOH solution followed by 1% (v/v) H2 O2 . Further, cellulolytic enzymes were produced by submerged fermentation using Trichoderma reesei Rut C30 and used for OPEFB hydrolysis. The filter paper cellulase activity of the crude cellulolytic enzymes was 15.1 IU/mL, which was higher than those obtained by reported Trichoderma strains under laboratory conditions. Glucose and xylose yields reached 66.9% and 74.2%, respectively, at 30 filter paper unit (FPU)/g-biomass enzyme dosage and 10% (w/v) biomass loading. The hybrid yeast strain ScF2 was previously constructed through recursive genome shuffling of Pichia stipitis and Saccharomyces cerevisiae and was used in OPEFB hydrolysate fermentation. About 16.9 g/L ethanol was produced with an ethanol yield of 0.34 g/g sugars, which was 67% of theoretical ethanol yield.


Assuntos
Etanol/metabolismo , Microbiologia Industrial , Óleo de Palmeira/metabolismo , Leveduras/metabolismo , Biocatálise , Biomassa , Celulase/metabolismo , Fermentação , Frutas/metabolismo , Proteínas Fúngicas/metabolismo , Hidrólise , Hypocreales/enzimologia , Hypocreales/metabolismo , Lignina/metabolismo , Pichia/enzimologia , Pichia/metabolismo , Saccharomyces cerevisiae/enzimologia , Saccharomyces cerevisiae/metabolismo , Xilose/metabolismo , Leveduras/enzimologia
4.
J Agric Food Chem ; 67(42): 11758-11768, 2019 Oct 23.
Artigo em Inglês | MEDLINE | ID: mdl-31577438

RESUMO

Patulin contamination not only is a menace to human health but also causes serious environmental problems worldwide due to the synthetic fungicides that are used to control it. This study focused on investigating the patulin degradation mechanism in Pichia caribbica at the molecular level. According to the results, P. caribbica (2 × 106 cells/mL) was able to degrade patulin from 20 µg/mL to an undetectable level in 72 h. The RNA-seq data showed patulin-induced oxidative stress and responses in P. caribbica. The deletion of PcCRG1 led to a significant decrease in patulin degradation by P. caribbica, whereas the overexpression of PcCRG1 accelerated the degradation of patulin. The study identified that PcCRG1 protein had the ability to degrade patulin in vitro. Overall, we demonstrated that the patulin degradation process in P. caribbica was more than one way; PcCRG1 was an S-adenosylmethionine-dependent methyltransferase and played an important role in the patulin degradation process in P. caribbica.


Assuntos
Proteínas Fúngicas/metabolismo , Fungicidas Industriais/metabolismo , Metiltransferases/metabolismo , Patulina/metabolismo , Pichia/metabolismo , S-Adenosilmetionina/metabolismo , Sequência de Aminoácidos , Proteínas Fúngicas/química , Proteínas Fúngicas/genética , Metiltransferases/química , Metiltransferases/genética , Pichia/enzimologia , Pichia/genética , Alinhamento de Sequência
5.
J Microbiol Biotechnol ; 28(9): 1482-1492, 2018 Sep 28.
Artigo em Inglês | MEDLINE | ID: mdl-30369113

RESUMO

Fusarium oxysporum trypsin (FOT) is a fungal serine protease similar to mammal trypsin. The FOT could be successfully expressed in Pichiapastoris by engineering the natural propeptide APQEIPN. In this study, we constructed two recombinant enzymes with engineered amino acid sequences added to the N-terminus of FOT and expressed in P. pastoris. The N-terminal residues had various effects on the structural and functional properties of trypsin. The FOT, and the recombinants TE (with peptide YVEF) and TS (with peptide YV) displayed the same optimum temperature (40°C) and pH (8.0). However, the combinants TE and TS showed significantly increased thermal stability at 40°C and 50°C. Moreover, the combinants TE and TS also showed enhanced tolerance of alkaline pH conditions. Compared with those of wild-type FOT, the intramolecular hydrogen bonds and the cation π-interactions of the recombinants TE and TS were significantly increased. The recombinants TE and TS also had significantly increased catalytic efficiencies (referring to the specificity constant, kcat/Km), 1.75-fold and 1.23-fold than wild-type FOT. In silico modeling analysis uncovered that the introduction of the peptides YVEF and YV resulted in shorter distances between the substrate binding pocket (D174, G198, and G208) and catalytic triad (His42, Asp102, and Ser180), which would improve the electron transfer rate and catalytic efficiency. In addition, N-terminal residues modification described here may be a useful approach for improving the catalytic efficiencies and characteristics of other target enzymes.


Assuntos
Proteínas de Bactérias/química , Proteínas de Bactérias/metabolismo , Fusarium/enzimologia , Pichia/genética , Tripsina/química , Tripsina/metabolismo , Sequência de Aminoácidos , Proteínas de Bactérias/genética , Biocatálise , Simulação por Computador , Estabilidade Enzimática , Fusarium/genética , Concentração de Íons de Hidrogênio , Cinética , Peptídeos/química , Peptídeos/genética , Pichia/enzimologia , Engenharia de Proteínas , Proteínas Recombinantes de Fusão/química , Proteínas Recombinantes de Fusão/genética , Proteínas Recombinantes de Fusão/metabolismo , Relação Estrutura-Atividade , Temperatura , Tripsina/genética
6.
Appl Microbiol Biotechnol ; 102(12): 5235-5244, 2018 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-29680898

RESUMO

Inorganic polyphosphate (polyP) is a significant regulatory and metabolic compound in yeast cells. We compared polyP content and localization, polyphosphatase activities, and transcriptional profile of polyP-related genes in industrially important methylotrophic yeasts, Hansenula polymorpha and Pichia pastoris. The increased need for phosphate, the decrease of long-chain polyP level, the accumulation of short-chain polyP, and enhanced endopolyphosphatase activity in the crude membrane fraction were observed in methanol-grown cells compared with glucose-grown cells of both species. Transcriptome analysis revealed notable differences in the expression patterns of key genes encoding proteins related to polyP metabolism. In methanol-grown cells, the genes encoding endopolyphosphatases and phosphate transporters were upregulated. The changes in polyP metabolism are probably related to the peculiarities of bioenergetics of methanol-grown cells.


Assuntos
Pichia , Polifosfatos/metabolismo , Saccharomycetales , Perfilação da Expressão Gênica , Regulação Fúngica da Expressão Gênica , Metanol/metabolismo , Pichia/química , Pichia/enzimologia , Pichia/genética , Polifosfatos/análise , Saccharomycetales/química , Saccharomycetales/enzimologia , Saccharomycetales/genética
7.
J Biotechnol ; 272-273: 40-47, 2018 Apr 20.
Artigo em Inglês | MEDLINE | ID: mdl-29549004

RESUMO

Δ9-Tetrahydrocannabinolic acid (THCA) is a secondary natural product from the plant Cannabis sativa L. with therapeutic indications like analgesics for cancer pain or reducing spasticity associated with multiple sclerosis. Here, we investigated the influence of the co-expression of 12 helper protein genes from Komagataella phaffii (formerly Pichia pastoris) on the functional expression of the Δ9-tetrahydrocannabinolic acid synthase (THCAS) heterologously expressed in K. phaffii by screening 21 clones of each transformation. Our findings substantiate the necessity of a suitable screening system when interfering with the secretory network of K. phaffii. We found that co-production of the chaperones CNE1p and Kar2p, the foldase PDI1p, the UPR-activator Hac1p as well as the FAD synthetase FAD1p enhanced THCAS activity levels within the K. phaffii cells. The strongest influence showed co-expression of Hac1s - increasing the volumetric THCAS activities 4.1-fold on average. We also combined co-production of Hac1p with the other beneficial helper proteins to further enhance THCAS activity levels. An optimized strain overexpressing Hac1s, FAD1 and CNE1 was isolated that showed 20-fold increased volumetric, intracellular THCAS activity compared to the starting strain. We used this strain for a whole cell bioconversion of cannabigerolic acid (CBGA) to THCA. After 8 h of incubation at 37 °C, the cells produced 3.05 g L-1 THCA corresponding to 12.5% gTHCA gCDW-1.


Assuntos
Benzoatos/metabolismo , Dronabinol/metabolismo , Oxirredutases Intramoleculares/genética , Oxirredutases Intramoleculares/metabolismo , Pichia/enzimologia , Pichia/genética , Processamento de Proteína Pós-Traducional
8.
Biomol NMR Assign ; 12(1): 57-62, 2018 04.
Artigo em Inglês | MEDLINE | ID: mdl-28916982

RESUMO

Telomerase is a multisubunit ribonucleoprotein enzyme that is essential for continuous cellular proliferation. A key role of telomerase in cancer and ageing makes it a promising target for the development of cancer therapies and treatments of other age-associated diseases, since telomerase allows unlimited proliferation potential of cells in the majority of cancer types. However, the structure and molecular mechanism of telomerase action are still poorly understood. In budding yeast, telomerase consists of the catalytic subunit, the telomerase reverse transcriptase or Est2 protein, telomerase RNA (TLC1) and two regulatory subunits, Est1 and Est3. Each of the four subunits is essential for in vivo telomerase function. Est3 interacts directly with Est1 and Est2, and stimulates Est2 catalytic activity. However, the exact role of the Est3 protein in telomerase function is still unknown. Determination of the structure, dynamic and functional properties of Est3 can bring new insights into the molecular mechanism of telomerase activity. Here we report nearly complete 1H, 13C and 15N resonance assignments of Est3 from the yeast Hansenula polymorpha. Analysis of the assigned chemical shifts allowed us to identify the protein's secondary structure and backbone dynamic properties. Structure-based sequence alignment revealed similarities in the structural organization of yeast Est3 and mammalian TPP1 proteins.


Assuntos
Ressonância Magnética Nuclear Biomolecular , Pichia/enzimologia , Subunidades Proteicas/química , Telomerase/química , Estrutura Secundária de Proteína
9.
Biosens Bioelectron ; 101: 116-122, 2018 Mar 15.
Artigo em Inglês | MEDLINE | ID: mdl-29055193

RESUMO

Methanol is a poison which is frequently discovered in alcoholic beverages. Innovative methods to detect methanol in alcoholic beverages are being constantly developed. We report for the first time a new strategy for the detection of methanol using fluorescence spectroscopy and photoelectrochemical (PEC) analysis. The analytical system is based on the oxidation of cysteine (CSH) with hydrogen peroxide (H2O2) enzymatically generated by alcohol oxidase (AOx). H2O2 oxidizes capping agent CSH, modulating the growth of CSH-stabilized cadmium sulphide quantum dots (CdS QDs). Disposable screen-printed carbon electrodes (SPCEs) modified with a conductive osmium polymer (Os-PVP) complex were employed to quantify resulting CdS QDs. This polymer facilitates the "wiring" of in situ enzymatically generated CdS QDs, which photocatalyze oxidation of 1-thioglycerol (TG), generating photocurrent as the readout signal. Likewise, we proved that our systems did not suffer from interference by ethanol. The PEC assays showed better sensitivity than conventional methods, covering a wide range of potential applications for methanol quantification.


Assuntos
Oxirredutases do Álcool/química , Bebidas Alcoólicas/análise , Técnicas Biossensoriais/métodos , Compostos de Cádmio/química , Metanol/análise , Pichia/enzimologia , Pontos Quânticos/química , Sulfetos/química , Cisteína/química , Técnicas Eletroquímicas/métodos , Enzimas Imobilizadas/química , Peróxido de Hidrogênio/química , Limite de Detecção , Oxirredução
10.
Appl Biochem Biotechnol ; 185(1): 316-333, 2018 May.
Artigo em Inglês | MEDLINE | ID: mdl-29150773

RESUMO

Enzyme reaction products and by-products from pretreatment steps can inhibit endoglucanases and are major factors limiting the efficiency of enzymatic lignocellulosic biomass hydrolysis. The gene encoding the endoglucanase from Scytalidium thermophilum (egst) was cloned and expressed as a soluble protein in Pichia pastoris GS115. The recombinant enzyme (Egst) was monomeric (66 kDa) and showed an estimated carbohydrate content of 53.3% (w/w). The optimum temperature and pH of catalysis were 60-70 °C and pH of 5.5, respectively. The enzyme was highly stable at pH 3.0-8.0 with a half-life in water of 100 min at 65 °C. The Egst presented good halotolerance, retaining 84.1 and 71.4% of the control activity in the presence of 0.5 and 2.0 mol L-1 NaCl, respectively. Hydrolysis of medium viscosity carboxymethylcellulose (CMC) by Egst was stimulated 1.77-, 1.84-, 1.64-, and 1.8-fold by dithiothreitol, ß-mercaptoethanol, cysteine, and manganese at 10, 10, 10, and 5 mmol L-1 concentration, respectively. The enzyme hydrolyzed CMC with maximal velocity and an apparent affinity constant of 432.10 ± 16.76 and 10.5 ± 2.53 mg mL-1, respectively. Furthermore, the Egst was tolerant to reaction products and able to act on pretreated fractions sugarcane bagasse demonstrating excellent properties for application in the hydrolysis of lignocellulosic biomass.


Assuntos
Ascomicetos , Proteínas Fúngicas , Expressão Gênica , Glicosídeo Hidrolases , Ascomicetos/enzimologia , Ascomicetos/genética , Estabilidade Enzimática , Proteínas Fúngicas/biossíntese , Proteínas Fúngicas/química , Proteínas Fúngicas/genética , Glicosídeo Hidrolases/biossíntese , Glicosídeo Hidrolases/química , Glicosídeo Hidrolases/genética , Pichia/enzimologia , Pichia/genética , Proteínas Recombinantes/biossíntese , Proteínas Recombinantes/química , Proteínas Recombinantes/genética
11.
J Biol Chem ; 292(36): 14730-14746, 2017 09 08.
Artigo em Inglês | MEDLINE | ID: mdl-28701466

RESUMO

Methionine synthase (MS) catalyzes methylation of homocysteine, the last step in the biosynthesis of methionine, which is essential for the regeneration of tetrahydrofolate and biosynthesis of S-adenosylmethionine. Here, we report that MS is localized to the nucleus of Pichia pastoris and Candida albicans but is cytoplasmic in Saccharomyces cerevisiae The P. pastoris strain carrying a deletion of the MET6 gene encoding MS (Ppmet6) exhibits methionine as well as adenine auxotrophy indicating that MS is required for methionine as well as adenine biosynthesis. Nuclear localization of P. pastoris MS (PpMS) was abrogated by the deletion of 107 C-terminal amino acids or the R742A mutation. In silico analysis of the PpMS structure indicated that PpMS may exist in a dimer-like configuration in which Arg-742 of a monomer forms a salt bridge with Asp-113 of another monomer. Biochemical studies indicate that R742A as well as D113R mutations abrogate nuclear localization of PpMS and its ability to reverse methionine auxotrophy of Ppmet6 Thus, association of two PpMS monomers through the interaction of Arg-742 and Asp-113 is essential for catalytic activity and nuclear localization. When PpMS is targeted to the cytoplasm employing a heterologous nuclear export signal, it is expressed at very low levels and is unable to reverse methionine and adenine auxotrophy of Ppmet6 Thus, nuclear localization is essential for the stability and function of MS in P. pastoris. We conclude that nuclear localization of MS is a unique feature of respiratory yeasts such as P. pastoris and C. albicans, and it may have novel moonlighting functions in the nucleus.


Assuntos
5-Metiltetra-Hidrofolato-Homocisteína S-Metiltransferase/análise , Candida albicans/enzimologia , Núcleo Celular/enzimologia , Citoplasma/enzimologia , Pichia/enzimologia , Saccharomyces cerevisiae/enzimologia , 5-Metiltetra-Hidrofolato-Homocisteína S-Metiltransferase/genética , 5-Metiltetra-Hidrofolato-Homocisteína S-Metiltransferase/metabolismo , Candida albicans/citologia , Metionina/metabolismo , Microscopia de Fluorescência , Modelos Moleculares , Pichia/citologia , Transporte Proteico , Saccharomyces cerevisiae/citologia
12.
J Basic Microbiol ; 57(6): 504-516, 2017 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-28272809

RESUMO

The aim of this study was to investigate the ability to produce extracellular hydrolytic enzymes at low temperature of yeasts isolated from 25 de Mayo island, Antarctica, and to identify those exhibiting one or more of the evaluated enzymatic activities. A total of 105 yeast isolates were obtained from different samples and 66 were identified. They belonged to 12 basidiomycetous and four ascomycetous genera. Most of the isolates were ascribed to the genera Cryptococcus, Mrakia, Cystobasidium, Rhodotorula, Gueomyces, Phenoliferia, Leucosporidium, and Pichia. Results from enzymes production at low temperatures revealed that the Antarctic environment contains metabolically diverse cultivable yeasts, which represent potential tools for biotechnological applications. While most the isolates proved to produce 2-4 of the investigated exoenzymes, two of them evidenced the six evaluated enzymatic activities: Pichia caribbica and Guehomyces pullulans, which were characterized as psycrotolerant and psycrophilic, respectively. In addition, P. caribbica could assimilate several n-alkanes and diesel fuel. The enzyme production profile and hydrocarbons assimilation capacity, combined with its high level of biomass production and the extended exponential growth phase make P. caribbica a promising tool for cold environments biotechnological purposes in the field of cold-enzymes production and oil spills bioremediation as well.


Assuntos
Adaptação Fisiológica , Ascomicetos/metabolismo , Basidiomycota/metabolismo , Bioprospecção , Biotecnologia , Temperatura Baixa , Microbiologia do Solo , Regiões Antárticas , Ascomicetos/enzimologia , Ascomicetos/isolamento & purificação , Basidiomycota/enzimologia , Basidiomycota/isolamento & purificação , Biodegradação Ambiental , Biomassa , DNA Fúngico , Proteínas Fúngicas/genética , Gasolina , Hidrocarbonetos/metabolismo , Filogenia , Pichia/enzimologia , Pichia/crescimento & desenvolvimento , Pichia/isolamento & purificação
13.
Enzyme Microb Technol ; 97: 104-113, 2017 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-28010766

RESUMO

A ß-glucosidase (BG), PaBG1b, from the xylophagous cockroach Panesthia angustipennis spadica was heterologously expressed in the methylotrophic yeast Pichia pastoris, purified, and biochemically characterized. Post-translational modification and N-terminal sequencing analysis demonstrated that the expression product was comprised of two polypeptides with different N-terminal sequences, presumably due to the presence of lysine-arginine (KR) sequence in the putative mature region. Substrate specificity analysis showed that PaBG1b hydrolyzed a broad range of substrates including cellohexaose, with the preference for aryl ß-d-fucosyl linkage and laminaribiose. Although the glucose tolerance of PaBG1b was moderate (Ki=200.3±1.1mM), PaBG1b demonstrated high specific activity and catalytic efficiency towards cellobiose with Vmax and kcat/Km values of 436.7±6.3U/mg and 109.8mM-1s-1, respectively. In addition, PaBG1b was not inhibited by cellobiose up to the highest concentration tested (100mM). Collectively, our work demonstrates that PaBG1b is a potentially valuable BG for commercial bioethanol production from cellulose.


Assuntos
Celobiose/metabolismo , Baratas/enzimologia , Proteínas de Insetos/metabolismo , beta-Glucosidase/metabolismo , Animais , Biocombustíveis , Baratas/genética , Estabilidade Enzimática , Etanol/metabolismo , Genes de Insetos , Proteínas de Insetos/genética , Cinética , Pichia/enzimologia , Pichia/genética , Processamento de Proteína Pós-Traducional , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Especificidade por Substrato , beta-Glucosidase/genética
14.
Biochem Biophys Res Commun ; 481(1-2): 51-58, 2016 Dec 02.
Artigo em Inglês | MEDLINE | ID: mdl-27836547

RESUMO

Although the precise functions of ether phospholipids are still poorly understood, significant alterations in their physiological levels are associated either to inherited disorders or to aggressive metastatic cancer. The essential precursor, alkyl-dihydroxyacetone phosphate (DHAP), for all ether phospholipids species is synthetized in two consecutive reactions performed by two enzymes sitting on the inner side of the peroxisomal membrane. Here, we report the characterization of the recombinant human DHAP acyl-transferase, which performs the first step in alkyl-DHAP synthesis. By exploring several expression systems and designing a number of constructs, we were able to purify the enzyme in its active form and we found that it is tightly bound to the membrane through the N-terminal residues.


Assuntos
Aciltransferases/química , Aciltransferases/metabolismo , Proteínas de Membrana/metabolismo , Peroxissomos/metabolismo , Pichia/enzimologia , Aciltransferases/genética , Sítios de Ligação , Células HEK293 , Humanos , Proteínas de Membrana/química , Pichia/genética , Ligação Proteica , Proteínas Recombinantes/química , Proteínas Recombinantes/metabolismo
15.
PLoS One ; 11(7): e0159476, 2016.
Artigo em Inglês | MEDLINE | ID: mdl-27458710

RESUMO

The first step in methanol metabolism in methylotrophic yeasts, the oxidation of methanol and higher alcohols with molecular oxygen to formaldehyde and hydrogen peroxide, is catalysed by alcohol oxidase (AOX), a 600-kDa homo-octamer containing eight FAD cofactors. When these yeasts are grown with methanol as the carbon source, AOX forms large crystalline arrays in peroxisomes. We determined the structure of AOX by cryo-electron microscopy at a resolution of 3.4 Å. All residues of the 662-amino acid polypeptide as well as the FAD are well resolved. AOX shows high structural homology to other members of the GMC family of oxidoreductases, which share a conserved FAD binding domain, but have different substrate specificities. The preference of AOX for small alcohols is explained by the presence of conserved bulky aromatic residues near the active site. Compared to the other GMC enzymes, AOX contains a large number of amino acid inserts, the longest being 75 residues. These segments are found at the periphery of the monomer and make extensive inter-subunit contacts which are responsible for the very stable octamer. A short surface helix forms contacts between two octamers, explaining the tendency of AOX to form crystals in the peroxisomes.


Assuntos
Oxirredutases do Álcool/química , Oxirredutases do Álcool/metabolismo , Microscopia Crioeletrônica , Pichia/enzimologia , Oxirredutases do Álcool/ultraestrutura , Domínio Catalítico , Flavina-Adenina Dinucleotídeo/química , Flavina-Adenina Dinucleotídeo/metabolismo , Modelos Moleculares , Ligação Proteica , Conformação Proteica , Domínios e Motivos de Interação entre Proteínas , Relação Estrutura-Atividade , Especificidade por Substrato
16.
Prikl Biokhim Mikrobiol ; 52(2): 184-92, 2016.
Artigo em Russo | MEDLINE | ID: mdl-27266247

RESUMO

A platform for the cloning and expression of active human butyrylcholinesterase (BuChE) in the yeast Pichia pastoris is first presented. Genetic constructs for BuChE gene expression, separately and in conjunction with a proline-rich peptide called proline-rich attachment domain (PRAD), are based on the vector pPICZαA. It is shown that the highest level of production is achieved in the expression of a BuChE gene without PRAD pPICZαA. It is found that one can obtain up to 125 mg of active enzyme from 1 L of culture medium at an optimal pH environment (pH 7.6), an optical seed culture density of 3 o.u., and an optimum methanol addition mode of (0.5% methanol in the first day and 0.2% thereafter from the second day).


Assuntos
Antídotos , Butirilcolinesterase/biossíntese , DNA/biossíntese , Butirilcolinesterase/química , Butirilcolinesterase/genética , Clonagem Molecular , DNA/genética , Humanos , Organofosfatos/química , Organofosfatos/toxicidade , Peptídeos/química , Pichia/enzimologia , Pichia/genética , Prolina/química
17.
Tsitol Genet ; 49(5): 13-9, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-26638492

RESUMO

Using similarity search we identified Candida (Pichia) guilliermondii genes involved in iron acquisition. This yeast possesses at least four genes potentially coding for ferri-reductases, four genes encoding iron permeases and two genes codingforferroxidases. Identified C.(P.) guilliermondii genes encoding ferroxidases possess different patterns of expression under iron repletion conditions whereas their expression is activated under iron deficiency conditions or in mutant strains defective in regulation of iron acquisition. C.(P.) guilliermondii has no homologue of Saccharomyces cerevisiae transcriptional regulator of iron metabolism, Aft1p and possess an iron regulatory network similar to that of Candida albicans. Since most of C.(P.) guilliermondii known strains are not pathogenic, in contrast to that of C. albicans, we propose C.(P.) guilliermondii as safe and useful model for studying iron-dependent regulation of metabolism in yeasts belonging to CUG clade.


Assuntos
Ceruloplasmina/genética , FMN Redutase/genética , Proteínas Fúngicas/genética , Regulação Fúngica da Expressão Gênica , Ferro/metabolismo , Proteínas de Membrana Transportadoras/genética , Pichia/genética , Candida albicans/classificação , Candida albicans/enzimologia , Candida albicans/genética , Ceruloplasmina/metabolismo , FMN Redutase/metabolismo , Proteínas Fúngicas/metabolismo , Redes Reguladoras de Genes , Transporte de Íons , Proteínas de Membrana Transportadoras/metabolismo , Filogenia , Pichia/classificação , Pichia/enzimologia , Homologia de Sequência de Aminoácidos
18.
J Med Chem ; 58(22): 9004-9, 2015 Nov 25.
Artigo em Inglês | MEDLINE | ID: mdl-26522624

RESUMO

Human carbonic anhydrase IX (CA IX) is overexpressed in a number of solid tumors and is considered to be a marker for cellular hypoxia that it is not produced in most normal tissues. CA IX contributes to the acidification of the extracellular matrix, which, in turn, favors tumor growth and metastasis. Therefore, CA IX is considered to be a promising anti-cancer drug target. However, the ability to specifically target CA IX is challenging due to the fact that the human genome encodes 15 different carbonic anhydrase isoforms that have a high degree of homology. Furthermore, structure-based drug design of CA IX inhibitors so far has been largely unsuccessful due to technical difficulties regarding the expression and crystallization of the enzyme. Currently, only one baculovirus-produced CA IX structure in complex with a nonspecific CA inhibitor, acetazolamide, is available in Protein Data Bank. We have developed an efficient system for the production of the catalytic domain of CA IX in methylotrophic yeast Pichia pastoris. The produced protein can be easily crystallized in the presence of inhibitors, as we have demonstrated for several 2-thiophene-sulfonamide compounds. We have also observed significant differences in the binding mode of chemically identical compounds to CA IX and CA II, which can be further exploited in the design of CA IX-specific inhibitors.


Assuntos
Antígenos de Neoplasias/química , Anidrases Carbônicas/química , Neoplasias/enzimologia , Acetazolamida/farmacologia , Antígenos de Neoplasias/biossíntese , Antineoplásicos/farmacologia , Baculoviridae/metabolismo , Anidrase Carbônica IX , Inibidores da Anidrase Carbônica/farmacologia , Anidrases Carbônicas/biossíntese , Clonagem Molecular , Cristalização , Bases de Dados de Proteínas , Humanos , Isoenzimas , Modelos Moleculares , Pichia/enzimologia , Relação Estrutura-Atividade , Especificidade por Substrato , Difração de Raios X
19.
Electron. j. biotechnol ; 18(5): 338-342, Sept. 2015. ilus, graf, tab
Artigo em Inglês | LILACS | ID: lil-764018

RESUMO

Background Aspergillus niger has the ability to secrete feruloyl esterase. However, for economically viable industrial applications, it is necessary to increase their catalytic activities and/or protein yields to satisfy the increasing needs for feruloyl esterases. Results The gene AnFaeA that encodes a type A feruloyl esterase was successfully expressed in Pichia pastoris by a two-copy engineered yeast. After a screen in shaker flask, a one-copy strain GSKFA3 having the highest feruloyl esterase activity of 2.4 U/mL was obtained. Then, the pPICZaA-AnFaeA plasmid was transformed into GSKFA3 and the transformants were grown on YPDS plates with antibiotic Zeocin. After cultivation, a two-copy strain GSKZaFA20 with the highest feruloyl esterase activity of 15.49 U/mL was obtained. The expressed protein (recombinant AnFaeA) may be a glycoprotein with an apparent molecular weight of 40 kDa. It displayed the maximum activity at pH 6.0 and 50°C, and was stable at a pH range of 4.0-6.5 and at below 45°C. Its activity was not significantly affected by K+, Ca2 +, Mg2 +, Cu2 +, Zn2 +, Mn2 +, Na+ and EDTA, but activated by Fe2 +. The Km and Vmax toward 4-nitrophenyl ferulate were 5.5 mM and 69.0 U/mg, respectively. Conclusions The two-copy strain GSKZaFA20 showed a 4.4-fold increase in extracellular enzyme activity compared with the one-copy strain GSKFA3. Construction of two-copy strain improved secretion of recombinant AnFaeA in P. pastoris.


Assuntos
Pichia/enzimologia , Aspergillus niger/enzimologia , Hidrolases de Éster Carboxílico/metabolismo , Leveduras , Western Blotting
20.
Int J Mol Sci ; 16(6): 13579-94, 2015 Jun 12.
Artigo em Inglês | MEDLINE | ID: mdl-26075873

RESUMO

A thermostable esterase gene (hydS14) was cloned from an Actinomadura sp. S14 gene library. The gene is 777 bp in length and encodes a polypeptide of 258 amino acid residues with no signal peptide, no N-glycosylation site and a predicted molecular mass of 26,604 Da. The encoded protein contains the pentapeptide motif (GYSLG) and catalytic triad (Ser88-Asp208-His235) of the esterase/lipase superfamily. The HydS14 sequence shows 46%-64% identity to 23 sequences from actinomycetes (23 α/ß-hydrolases), has three conserved regions, and contains the novel motif (GY(F)SLG), which distinguishes it from other clusters in the α/ß-hydrolase structural superfamily. A plasmid containing the coding region (pPICZαA-hydS14) was used to express HydS14 in Pichia pastoris under the control of the AOXI promoter. The recombinant HydS14 collected from the supernatant had a molecular mass of ~30 kDa, which agrees with its predicted molecular mass without N-glycosylation. HydS14 had an optimum temperature of approximately 70 °C and an optimum pH of 8.0. HydS14 was stable at 50 and 60 °C for 120 min, with residual activities of above 80% and above 90%, respectively, as well as 50% activity at pH 6.0-8.0 and pH 9.0, respectively. The enzyme showed higher activity with p-nitrophenyl-C2 and C4. The Km and Vmax values for p-nitrophenyl-C4 were 0.21 ± 0.02 mM and 37.07 ± 1.04 µmol/min/mg, respectively. The enzyme was active toward short-chain p-nitrophenyl ester (C2-C6), displaying optimal activity with p-nitrophenyl-C4 (Kcat/Km = 11.74 mM(-1) · S(-1)). In summary, HydS14 is a thermostable esterase from Actinomadura sp. S14 that has been cloned and expressed for the first time in Pichia pastoris.


Assuntos
Actinobacteria/enzimologia , Proteínas de Bactérias/metabolismo , Esterases/metabolismo , Actinobacteria/genética , Sequência de Aminoácidos , Proteínas de Bactérias/química , Proteínas de Bactérias/genética , Sequência de Bases , Clonagem Molecular , Estabilidade Enzimática , Esterases/química , Esterases/genética , Temperatura Alta , Dados de Sequência Molecular , Pichia/enzimologia , Pichia/genética , Desnaturação Proteica , Especificidade por Substrato
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