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1.
Indian J Med Microbiol ; 49: 100574, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-38561026

RESUMO

PURPOSE: The Shewanella genus is a rare pathogen of marine origin. In recent years, there has been a continuous increase in infection cases caused by this bacterium, and we have observed the uniqueness of infections caused by this microorganism. MATERIALS AND METHODS: This study conducted a retrospective analysis of the medical history and laboratory examination data of patients infected with the Shewanella genus over the past decade. Additionally, it employed bioinformatics methods to analyze the relevant virulence factors and antibiotic resistance genes associated with the Shewanella genus. RESULTS: Over the past 10 years, we have isolated 51 cases of Shewanella, with 68.82% being Shewanella putrefaciens (35/51 cases) and 31.37% being Shewanella algae (16/51 cases). Infected individuals often had underlying diseases, with 39.22% (20/51) having malignant tumors and 25.49% (13/51) having liver and biliary system diseases primarily characterized by stones. The majority of patients, 62.74% (32/51), exhibited mixed infections, including one case with a combination of infections from three other types of bacteria and five cases with a combination of infections from two other types of bacteria. The identified microorganisms were commonly resistant to ticarcillin-clavulanic acid (23.5%), followed by cefoperazone-sulbactam (19.6%), ciprofloxacin (17.6%), and cefotaxime (17.6%). Bioinformatics analysis indicates that Shewanella can express bile hydrolysis regulators and fatty acid metabolism regulators that aid in adapting to the unique environment of the biliary tract. Additionally, it expresses abundant catalase, superoxide dismutase, and two-component signal transduction system proteins, which may be related to environmental adaptation. Shewanella also expresses various antibiotic resistance genes, including beta-lactamases and aminoglycoside modification enzymes. Iron carriers may be one of its important virulence factors. CONCLUSIONS: We speculate that the Shewanella genus may exist as a specific colonizer in the human body, and under certain conditions, it may act as a pathogen, leading to biliary infections in the host.


Assuntos
Infecções por Bactérias Gram-Negativas , Shewanella , Fatores de Virulência , Humanos , Shewanella/genética , Shewanella/classificação , Shewanella/isolamento & purificação , Shewanella/patogenicidade , Estudos Retrospectivos , Infecções por Bactérias Gram-Negativas/microbiologia , Masculino , Feminino , Pessoa de Meia-Idade , Adulto , Fatores de Virulência/genética , Idoso , Farmacorresistência Bacteriana/genética , Antibacterianos/farmacologia , Adulto Jovem , Adolescente , Shewanella putrefaciens/genética , Shewanella putrefaciens/isolamento & purificação , Shewanella putrefaciens/classificação
2.
Int J Syst Evol Microbiol ; 71(12)2021 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-34904941

RESUMO

A Gram-stain-negative, motile, facultative anaerobic and rod-shaped bacterium, designated strain NR704-98T, was isolated from marine sediment of the northern South China Sea. Cells were positive for oxidase and catalase activity. Growth was observed at 4-30 °C (optimum 20-25 °C), at pH 6-9 (pH 7) and with 0.5-7 % NaCl (2 %). The 16S rRNA gene-based phylogenetic analysis revealed that the nearest phylogenetic neighbours of strain NR704-98T were Shewanella woodyi MS32T (97.9 %), Shewanella hanedai 281T (97.1 %), Shewanella sediminis HAW-EB3T (96.8 %) and Shewanella canadensis HAW-EB2T (96.7 %). Based on the results of phylogenomic analysis, the average nucleotide identity and the digital DNA-DNA hybridization values between strain NR704-98T and the previously mentioned type strains of species of the genus Shewanella were in the range of 74.9-93.1 % and 20.6-51.4 %, respectively. The respiratory quinones were Q-7 and Q-8. The predominant fatty acids (>10 %) of strain NR704-98T were C16 : 0, summed feature 3 (C16 : 1 ω7c and/or C16 : 1 ω6c) and iso-C15 : 0. Phosphatidylethanolamine, phosphatidylglycerol, two unidentified aminophospholipids and five unidentified lipids were detected in strain NR704-98T. Based on the phylogenetic and phenotypic characteristics, strain NR704-98T is considered to represent a novel species of the genus Shewanella, for which the name Shewanella nanhaiensis sp. nov. is proposed. The type strain is NR704-98T (=KCTC 82799T=MCCC 1K06091T).


Assuntos
Sedimentos Geológicos/microbiologia , Filogenia , Água do Mar/microbiologia , Shewanella , Técnicas de Tipagem Bacteriana , Composição de Bases , China , DNA Bacteriano/genética , Ácidos Graxos/química , Fosfolipídeos/química , RNA Ribossômico 16S/genética , Análise de Sequência de DNA , Shewanella/classificação , Shewanella/isolamento & purificação , Vitamina K 2/química
3.
FEMS Microbiol Lett ; 367(15)2020 08 01.
Artigo em Inglês | MEDLINE | ID: mdl-32681637

RESUMO

A Gram-stain-negative and flagellated bacterial strain, SHSM-M6T, was isolated from salt marsh from Yellow Sea, Republic of Korea. Neighbor-joining phylogenetic tree of 16S rRNA gene sequences showed that strain SHSM-M6T belongs to the genus Shewanella. 16S rRNA gene sequence similarity values between strain SHSM-M6T and the type strains of Shewanella species were <98.0%. The average nucleotide identity and DNA-DNA hybridization values between genomic sequences of strain SHSM-M6T and the type strains of Shewanella species were <73.3 and 20.7%, respectively. Strain SHSM-M6T contained MK-6 as predominant menaquinone and Q-7 and Q-8 as the predominant ubiquinones. The novel strain contained C16:1ω7c and/or C16:1ω6c, iso-C15:0 and C16:0 as major fatty acids. Major polar lipids of strain SHSM-M6T were phosphatidylethanolamine, phosphatidylglycerol, one unidentified lipid, one unidentified aminolipid and one unidentified phospholipid. Differential phenotypic properties of strain SHSM-M6T, together with its phylogenetic and genetic distinctiveness, revealed that strain SHSM-M6T is separated from recognized Shewanella species. On the basis of the data presented, strain SHSM-M6T is considered to represent a novel species of the genus Shewanella, for which the name Shewanella salipaludis sp. nov. is proposed. The type strain is SHSM-M6T (=KACC 19901T = NBRC 113646T).


Assuntos
Shewanella/classificação , Áreas Alagadas , DNA Bacteriano/genética , RNA Ribossômico 16S/genética , República da Coreia , Shewanella/química , Shewanella/genética , Especificidade da Espécie
4.
J Photochem Photobiol B ; 208: 111895, 2020 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-32447192

RESUMO

Bioluminescence is a spectacular feature of some prokaryotes. In the present work, we address the distribution of bioluminescence among bacteria isolated from the White Sea finfishes. Luminous bacteria are widely distributed throughout the World Ocean. Many strains have been isolated and described for tropical latitudes, while Nordic seas still remain quite a white spot in studying bioluminescence of bacteria. We describe the strains related to the two main genera of luminous bacteria, Photobacterium and Aliivibrio, as well as Shewanella and Vibrio. They are related to families Vibrionaceae and Shewanellaceae of the Gammaproteobacteria class. Here, we at the first time, report the bioluminescence of the Enterobacteriaceae Kosakonia cowanii. Moreover, we applied the polyphasic approach to identify and describe the isolated microorganisms. The data on sequencing, diversity of cell fine structure, and light emission spectra at room temperature on the solid medium are discussed. The bacteria are characterized by features in their light emission spectra. It may reflect possible molecular mechanisms of bioluminescence as well as features of bacterial composition. The obtained data expands the existing body of knowledge about the bioluminescence spread among the bacteria of Nordic latitudes and provides complex information that is crucial for their precise identification.


Assuntos
Aliivibrio/genética , Enterobacteriaceae/genética , Peixes/microbiologia , Photobacterium/genética , Shewanella/genética , Vibrio/genética , Aliivibrio/isolamento & purificação , Animais , Enterobacteriaceae/classificação , Enterobacteriaceae/isolamento & purificação , Photobacterium/classificação , Photobacterium/isolamento & purificação , Filogenia , RNA Ribossômico 16S/química , RNA Ribossômico 16S/metabolismo , Shewanella/classificação , Shewanella/isolamento & purificação , Espectrometria de Fluorescência , Vibrio/classificação , Vibrio/isolamento & purificação
5.
Int J Syst Evol Microbiol ; 70(3): 2096-2102, 2020 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-31999242

RESUMO

A Gram-stain-negative, facultatively anaerobic, flagellated and rod-shaped bacterium, designated strain SM1901T, was isolated from a brown algal sample collected from Kings Bay, Svalbard, Arctic. Strain SM1901T grew at -4‒30 °C and with 0-7.0 % (w/v) NaCl. It reduced nitrate to nitrite and hydrolysed DNA and Tween 80. Results of phylogenetic analyses based on 16S rRNA gene sequences indicated that strain SM1901T was affiliated with the genus Shewanella, showing the highest sequence similarity to the type strain of Shewanella litoralis (97.5%), followed by those of Shewanella vesiculosa, Shewanella livingstonensis and Shewanella saliphila (97.3 % for all three). The major cellular fatty acids were summed feature 3 (C16 : 1 ω7с and/or C16 : 1 ω6с), C16 : 0, C18 : 0, iso-C15 : 0 and C17 : 1 ω8с and the major polar lipids were phosphatidylethanolamine and phosphatidylglycerol. The respiratory quinones were ubiquinones Q-7, Q-8, menaquinones MK-7(H) and MK-8. The genome of strain SM1901T was 4648537 nucleotides long and encoded a variety of cold adaptation related genes, providing clues for better understanding the ecological adaptation mechanisms of polar bacteria. The genomic DNA G+C content of strain SM1901T was 40.5 mol%. Based on the polyphasic evidence presented in this paper, strain SM1901T was considered to represent a novel species, constituting a novel psychrotolerant lineage out of the known SF clade encompassed by polar Shewanella species, within the genus Shewanella, for which the name Shewanella polaris sp. nov. is proposed. The type strain is SM1901T (=KCTC 72047T=MCCC 1K03585T).


Assuntos
Phaeophyceae/microbiologia , Shewanella/classificação , Regiões Árticas , Técnicas de Tipagem Bacteriana , Composição de Bases , DNA Bacteriano/genética , Ácidos Graxos/química , Fosfolipídeos/química , Filogenia , RNA Ribossômico 16S/genética , Análise de Sequência de DNA , Shewanella/isolamento & purificação , Svalbard , Ubiquinona/química , Vitamina K 2/análogos & derivados , Vitamina K 2/química
6.
BMC Infect Dis ; 18(1): 454, 2018 Sep 05.
Artigo em Inglês | MEDLINE | ID: mdl-30185170

RESUMO

BACKGROUND: Members of Shewanella species are opportunistic pathogens that are found in marine environments. Currently more than sixty species have been identified, whereas the most commonly clinical cases associated with Shewanella species have involved only two species, i.e., S. algae and S. putrefaciens. We present two cases of pulmonary and bloodstream infections caused by two rare Shewanella spp. strains from patients of gastrointestinal cancer. CASE PRESENTATION: Two male patients with a history of gastrointestinal cancer presented to hospital with pulmonary and bloodstream infections, respectively. The infective pathogens of both cases were primarily isolated and identified as Shewanella algae (case I) and Shewanella putrefaciens (case II) by phenotypic features and VITEK 2 system, but they were further confirmed as Shewanella haliotis and Shewanella upenei by 16S rRNA gene sequence analysis. The major bacterial composition of the bronchoalveolar lavage in case I was also identified as Shewanella by 16S rRNA amplicon sequencing analysis. Antimicrobial susceptibility testing showed that the two strains had broad susceptibility, but S. haliotis in the case I was resistant to ciprofloxacin and levofloxacin and S. upenei in the case II was intermediate to imipenem, piperacillin/tazobactam and ciprofloxacin. CONCLUSIONS: To the best of our knowledge, this is the first cases of the pulmonary and bloodstream infections caused by Shewanella spp. from clinical patients in mainland China. Shewanella as a potential pathogen in China should not be ignored.


Assuntos
Neoplasias Esofágicas/diagnóstico , Infecções por Bactérias Gram-Negativas/diagnóstico , Shewanella/isolamento & purificação , Neoplasias Gástricas/diagnóstico , Idoso , Antibacterianos/farmacologia , Líquido da Lavagem Broncoalveolar/microbiologia , China , Neoplasias Esofágicas/complicações , Infecções por Bactérias Gram-Negativas/complicações , Infecções por Bactérias Gram-Negativas/microbiologia , Humanos , Masculino , Testes de Sensibilidade Microbiana , Pessoa de Meia-Idade , Filogenia , RNA Ribossômico 16S/genética , Shewanella/classificação , Shewanella/efeitos dos fármacos , Shewanella/genética , Neoplasias Gástricas/complicações
7.
Int J Syst Evol Microbiol ; 68(9): 2960-2966, 2018 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-30028285

RESUMO

Three Gram-negative, non-spore-forming, rod-shaped and motile bacterial strains, designated MMS16-UL250T, MMS16-UL253T and MMS16-UL482T, were isolated from coastal seawater and subjected to taxonomic characterization. All isolates grew at 4-30 °C (optimum, 25 °C), at pH 6-10 (pH 7) and in the presence of up to 8 % NaCl (2.5-4.5 %). The 16S rRNA gene sequence similarities between the three isolates and Shewanella algicola St-6T, the closest species, were 98.1-99.2 %, and those among the isolates were 98.5-99.0 %. In the phylogenetic tree, MMS16-UL250T formed a cluster with S. algicola St-6T, but the DNA-DNA relatedness between the two strains was 28.8±1.5 %, thus confirming their separation at species level. The other two strains formed separate phylogenetic lines respectively. The main quinones for all strains were Q-7, Q-8, MK-7 and MMK-7, which is typical for Shewanella. The major polar lipids of all strains were phosphatidylglycerol and phosphatidylethanolamine, and the common major fatty acid was a summed feature consisting of C16 : 1ω7c and/or C16 : 1ω6c while the proportions varied among the three strains. The DNA G+C contents of the strains also varied between 42.1 and 43.7 mol%. Phenotypic properties distinguished each strain from S. algicola as well as from one another. Based on the polyphasic analysis, each strain is considered to represent a novel species of Shewanella, for which the names Shewanellasaliphila sp. nov. (type strain, MMS16-UL250T=KCTC 62131T=JCM 32304T), Shewanella ulleungensis sp. nov. (type strain, MMS16-UL253T=KCTC 62130T=JCM 32305T) and Shewanella litoralis sp. nov. (type strain, MMS16-UL482T=KCTC 62129T=JCM 32306T) are proposed.


Assuntos
Filogenia , Água do Mar/microbiologia , Shewanella/classificação , Técnicas de Tipagem Bacteriana , Composição de Bases , DNA Bacteriano/genética , Ácidos Graxos/química , Hibridização de Ácido Nucleico , Fosfolipídeos/química , RNA Ribossômico 16S/genética , República da Coreia , Análise de Sequência de DNA , Shewanella/genética , Shewanella/isolamento & purificação , Vitamina K 2/análogos & derivados , Vitamina K 2/química
8.
Int J Syst Evol Microbiol ; 67(6): 1901-1905, 2017 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-28629494

RESUMO

A Gram-stain-negative, rod-shaped bacterium with a singular polar flagellum, designated as strain XMDDZSB0408T, was isolated from the intestine of adult abalone, Haliotis diversicolor. Activity of oxidase was positive and catalase activity was negative. It could grow at salinities from 3 to 6 % NaCl (w/v), and pH 7-9. It had the highest sequence similarity of <96.0 % with all previously established species for the complete 16S rRNA gene (1531 bp). The results of phylogenetic analysis indicated that the strain was affiliated to the genus Shewanella and closely related to Shewanella gaetbuli TF-27T and Shewanella japonica KMM 3299T (95.8 % sequence similarity), Shewanella electrodiphila MAR441T (95.6 %), Shewanella pacifica KMM 3597T (95.4 %), Shewanella donghaensis LT17T (95.3 %) and Shewanella olleyana ACEM 9T (94.7 %). The respiratory quinones were MK-7, Q-8, Q-7, MK-8, Q-7 (H4) and Q-6. The predominant fatty acids consisted of C16:0, summed feature 3 (comprised of C16 : 1ω7c/C16 : 1ω6c), C18 : 0, summed feature 8 (comprised of C18 : 1ω7c/C18 : 1ω6c), C12 : 0 and C14 : 0. The polar lipids were identified as phosphatidylethanolamine (PE), a glycolipid (GL), a phospholipid (PL) and one unidentified lipid (L). The DNA G+C content was 41.4 mol% calculated from the draft genome sequence. On the basis of its polyphasic taxonomic properties, strain XMDDZSB0408T represented a novel species, for which the name Shewanella intestini sp. nov. was proposed, with the type strain XMDDZSB0408T (=KCTC 52125T=MCCC 1A01895T).


Assuntos
Gastrópodes/microbiologia , Intestinos/microbiologia , Filogenia , Shewanella/classificação , Animais , Técnicas de Tipagem Bacteriana , Composição de Bases , China , DNA Bacteriano/genética , Ácidos Graxos/química , Fosfolipídeos/química , RNA Ribossômico 16S/genética , Análise de Sequência de DNA , Shewanella/genética , Shewanella/isolamento & purificação , Vitamina K 2/química
9.
Int J Syst Evol Microbiol ; 66(12): 4947-4953, 2016 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-27562367

RESUMO

A novel Gram-stain-negative, rod-shaped bacterial strain, designated KX27T, was isolated from deep-sea sediment of the Okinawa Trough and characterized on the basis of a polyphasic taxonomic approach. The phenotypic features of strain KX27T were similar to those of members of the genus Shewanella. Strain KX27T exhibited highest 16S rRNA gene sequence similarity (98.37 %) to Shewanellabasaltis JCM 14937T. Levels of gyrB gene sequence similarity between strain KX27T and its closest genetic neighbours were lower than 90 %, the species cut-off value for Shewanella. The DNA-DNA hybridization value between strain KX27T and S. basaltis JCM 14937T (54 %) was lower than the accepted species threshold. The predominant cellular fatty acids of strain KX27T were summed feature 3 (C16 : 1ω7c and/or C16 : 1ω6c), C17 : 1ω8c, summed feature 8 (C18 : 1ω7c and/or C18 : 1ω6c) and iso-C15 : 0. The major polar lipids of strain KX27T were phosphatidylethanolamine and phosphatidylglycerol. On the basis of combined phenotypic, chemotaxonomic and phylogenetic analysis, strain KX27T represents a novel species of the genus Shewanella, for which the name Shewanella inventionis sp. nov. is proposed. The type strain is KX27T (=KCTC 42807T=CGMCC 1.15339T).


Assuntos
Sedimentos Geológicos/microbiologia , Filogenia , Água do Mar/microbiologia , Shewanella/classificação , Técnicas de Tipagem Bacteriana , Composição de Bases , DNA Bacteriano/genética , Ácidos Graxos/química , Hibridização de Ácido Nucleico , Fosfatidiletanolaminas/química , Fosfatidilgliceróis/química , RNA Ribossômico 16S/genética , Análise de Sequência de DNA , Shewanella/genética , Shewanella/isolamento & purificação , Vitamina K 2/análogos & derivados , Vitamina K 2/química
10.
Int J Syst Evol Microbiol ; 66(8): 2899-2905, 2016 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-27064664

RESUMO

A novel Gram-stain-negative, straight or slightly curved rod-shaped, non-spore-forming, facultatively anaerobic bacterium with a single polar flagellum, designated RZB5-4T, was isolated from a sample of the red algae Gelidium amansii collected from the coastal region of Rizhao, PR China (119.625° E 35.517° N). The organism grew optimally between 24 and 28 °C, at pH 7.0 and in the presence of 2-3 % (w/v) NaCl. The strain required seawater or artificial seawater for growth, and NaCl alone did not support growth. Strain RZB5-4T contained C16 : 1ω7c and/or C16 : 1ω6c, C16 : 0 and iso-C15 : 0 as the dominant fatty acids. The respiratory quinones detected in strain RZB5-4T were ubiquinone 7, ubiquinone 8, menaquinone 7 and methylmenaquinone 7. The polar lipids of strain RZB5-4T comprised phosphatidylethanolamine, phosphatidylglycerol, phosphatidylmonomethylethanolamine, one unidentified glycolipid, one unidentified phospholipid and one unknown lipid. The DNA G+C content of strain RZB5-4T was 47 mol %. Phylogenetic analysis based on 16S rRNA and gyrase B (gyrB) gene sequences showed that strain RZB5-4T belonged to the genus Shewanella, clustering with Shewanella waksmanii ATCC BAA-643T. Strain RZB5-4T exhibited the highest 16S rRNA gene sequence similarity value (96.6 %) and the highest gyrB gene sequence similarity value (80.7 %), respectively, to S. waksmanii ATCC BAA-643T. On the basis of polyphasic analyses, strain RZB5-4T represents a novel species of the genus Shewanella, for which the name Shewanella gelidii sp. nov. is proposed. The type strain is RZB5-4T (=JCM 30804T=KCTC 42663T=MCCC 1K00697T).


Assuntos
Filogenia , Rodófitas/microbiologia , Shewanella/classificação , Técnicas de Tipagem Bacteriana , Composição de Bases , China , DNA Girase/genética , DNA Bacteriano/genética , Ácidos Graxos/química , Fosfolipídeos/química , RNA Ribossômico 16S/genética , Análise de Sequência de DNA , Shewanella/genética , Shewanella/isolamento & purificação , Ubiquinona/química , Vitamina K 2/análogos & derivados , Vitamina K 2/química
11.
J Antibiot (Tokyo) ; 67(5): 395-9, 2014 May.
Artigo em Inglês | MEDLINE | ID: mdl-24496143

RESUMO

Chromatographic separation of a crude extract obtained from a fermentation broth of a chemically unknown bacterium Shewanella piezotolerans WP3 collected in deep-sea yielded three new indole alkaloids namely shewanellines A (1a), B (1b) and C (2), together with 12 known indole alkaloids. The structures were unambiguously elucidated on the basis of 1D and 2D NMR ((1)H, (13)C, COSY, HMBC, HSQC and NOESY) in association with MS and CD data. Compounds 1-4, 7, 9 and 11-14 were selected for the evaluation of their cytotoxic activities against human tumor cell lines HL-60 and BEL-7402, whereas compounds 2, 4 and 9 exhibited significant inhibition toward HL-60.


Assuntos
Alcaloides/isolamento & purificação , Alcaloides/farmacologia , Antibióticos Antineoplásicos/isolamento & purificação , Antibióticos Antineoplásicos/farmacologia , Indóis/isolamento & purificação , Indóis/farmacologia , Shewanella/química , Linhagem Celular Tumoral , Sobrevivência Celular/efeitos dos fármacos , Cromatografia Líquida de Alta Pressão , Meios de Cultura , Ensaios de Seleção de Medicamentos Antitumorais , Fermentação , Humanos , Espectroscopia de Ressonância Magnética , Shewanella/classificação , Espectrometria de Massas por Ionização por Electrospray
12.
Microbiol Res ; 168(8): 477-84, 2013 Oct 01.
Artigo em Inglês | MEDLINE | ID: mdl-23632047

RESUMO

Currently, l-serine is mainly produced by enzymatic conversion, in which serine hydroxymethyltransferase (SHMT) is the key enzyme, suggesting the importance of searching for a SHMT with high activity. Shewanella algae, a methanol-utilizing marine bacterium showing high SHMT activity, was selected based on screening bacterial strains and comparison of the activities of SHMTs. A glyA was isolated from the S. algae through thermal asymmetric interlaced PCR (TAIL-PCR) and it encoded a 417 amino acid polypeptide. The SaSHMT, encoded by the glyA, showed the optimal activity at 50°C and pH 7.0, and retained over 45% of its maximal activity after incubation at 40°C for 3h. The enzyme showed better stability under alkaline environment (pH 6.5-9.0) than Hyphomicrobium methylovorum GM2's SHMT (pH 6.0-7.5). The SaSHMT can produce 77.76mM of l-serine by enzymatic conversion, with the molecular conversion rate in catalyzing glycine to l-serine being 1.41-fold higher than that of Escherichia coli. Therefore, the SaSHMT has the potential for industrial applications due to its tolerance of alkaline environment and a relatively high enzymatic conversion rate.


Assuntos
Glicina Hidroximetiltransferase/metabolismo , Serina/biossíntese , Shewanella/metabolismo , Sequência de Aminoácidos , Sequência de Bases , Clonagem Molecular , Ativação Enzimática , Expressão Gênica , Glicina Hidroximetiltransferase/genética , Glicina Hidroximetiltransferase/isolamento & purificação , Dados de Sequência Molecular , Filogenia , Proteínas Recombinantes/genética , Proteínas Recombinantes/isolamento & purificação , Proteínas Recombinantes/metabolismo , Alinhamento de Sequência , Shewanella/classificação , Shewanella/enzimologia , Shewanella/genética
13.
Int J Syst Evol Microbiol ; 62(Pt 5): 1128-1133, 2012 May.
Artigo em Inglês | MEDLINE | ID: mdl-21724958

RESUMO

Two strains of dissimilatory iron-reducing bacteria, which could couple lactate oxidation to iron reduction for energy conservation, were isolated from Arctic marine sediment. The strains, IR12(T) and IR26, were both Gram-staining-negative, catalase- and oxidase-positive and facultative anaerobes. Their cells were rod-shaped and motile by means of a polar flagellum. Both strains grew in the presence of 0.5-3.5 % (w/v) NaCl, with an absolute requirement for Na(+). Both were psychrotolerant since they could grow at 4-28 °C but had an optimum growth temperature of 20 °C. Both grew at pH 4.5-9.0 (optimum, pH 7.5). The major fatty acids of strains IR12(T) and IR26 were summed feature 3 (C(16 : 1)ω6c and/or C(16 : 1)ω7c) and C(16 : 0). Phylogenetic analyses based on 16S rRNA gene sequences indicated that strains IR12(T) and IR26 belonged to the class Gammaproteobacteria and were most closely related to Shewanella vesiculosa M7(T), Shewanella livingstonensis NF22(T) and Shewanella frigidimarina ACAM 591(T) (with 98.5 and 98.8 %, 98.5 and 98.8 %, and 98.5 and 98.8 % sequence similarities, respectively). The genomic DNA G+C contents of strains IR12(T) and IR26 were 40.0 and 40.3 mol%, respectively. DNA-DNA relatedness data indicated that the two novel strains represented a single species that was distinct from S. vesiculosa M7(T), S. livingstonensis NF22(T) and S. frigidimarina ACAM 591(T). Based on the phylogenetic, phenotypic and DNA-DNA relatedness data, the two new strains represent a single novel species of the genus Shewanella, for which the name Shewanella arctica sp. nov. is proposed. The type strain is IR12(T) ( = KCTC 23109(T) = JCM 16723(T)).


Assuntos
Sedimentos Geológicos/microbiologia , Ferro/metabolismo , Lactatos/metabolismo , Shewanella/classificação , Shewanella/isolamento & purificação , Anaerobiose , Regiões Árticas , Técnicas de Tipagem Bacteriana , Composição de Bases , Catalase/análise , Análise por Conglomerados , DNA Bacteriano/química , DNA Bacteriano/genética , DNA Ribossômico/química , DNA Ribossômico/genética , Ácidos Graxos/análise , Flagelos/fisiologia , Concentração de Íons de Hidrogênio , Locomoção , Dados de Sequência Molecular , Hibridização de Ácido Nucleico , Oxirredução , Oxirredutases/análise , Filogenia , RNA Ribossômico 16S/genética , Análise de Sequência de DNA , Shewanella/genética , Shewanella/fisiologia , Cloreto de Sódio/metabolismo , Temperatura
15.
J Microbiol ; 49(3): 381-6, 2011 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-21717322

RESUMO

A Gram-staining-negative, motile, non-spore-forming and rod-shaped bacterial strain, 20-23R(T), was isolated from intestine of bensasi goatfish, Upeneus bensasi, and its taxonomic position was investigated by using a polyphasic study. Phylogenetic analyses based on 16S rRNA gene sequences revealed that strain 20-23R(T) belonged to the genus Shewanella. Strain 20-23R(T) exhibited 16S rRNA gene sequence similarity values of 99.5, 99.2, and 97.5% to Shewanella algae ATCC 51192(T), Shewanella haliotis DW01(T), and Shewanella chilikensis JC5(T), respectively. Strain 20-23R(T) exhibited 93.1-96.0% 16S rRNA gene sequence similarity to the other Shewanella species. It also exhibited 98.3-98.4% gyrB sequence similarity to the type strains of S. algae and S. haliotis. Strain 20-23R(T) contained simultaneously both menaquinones and ubiquinones; the predominant menaquinone was MK-7 and the predominant ubiquinones were Q-8 and Q-7. The fatty acid profiles of strain 20-23R(T), S. algae KCTC 22552(T) and S. haliotis KCTC 12896(T) were similar; major components were iso-C(15:0), C(16:0), C(16:1) ω7c and/or iso-C(15:0) 2-OH and C(17:1) ω8c. The DNA G+C content of strain 20-23R(T) was 53.9 mol%. Differential phenotypic properties and genetic distinctiveness of strain 20-23R(T), together with the phylogenetic distinctiveness, revealed that this strain is distinguishable from recognized Shewanella species. On the basis of the data presented, strain 20-23R(T) represents a novel species of the genus Shewanella, for which the name Shewanella upenei sp. nov. is proposed. The type strain is 20-23R(T) (=KCTC 22806(T) =CCUG 58400(T)).


Assuntos
Perciformes/microbiologia , Shewanella/classificação , Shewanella/isolamento & purificação , Animais , Técnicas de Tipagem Bacteriana , Composição de Bases , DNA Bacteriano/genética , DNA Ribossômico/genética , Ácidos Graxos/análise , Genes de RNAr , Lipólise , Dados de Sequência Molecular , Fenótipo , Filogenia , RNA Ribossômico 16S/genética , Análise de Sequência de DNA , Shewanella/genética , Shewanella/fisiologia , Especificidade da Espécie
16.
Scand J Infect Dis ; 42(10): 757-62, 2010 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-20524786

RESUMO

Shewanella is a rare human pathogen that can lead to fatal infections. However, clinical information about this bacterium remains scarce. In this study, we retrospectively reviewed all patients with laboratory isolates of Shewanella over an 8-y period to assess risk factors, clinical manifestations and outcome. Twenty-nine patients were identified. Shewanella was most commonly isolated from intra-abdominal specimens (48.2%), followed by skin and soft tissue specimens (27.6%), blood (13.8%) and sputum (10.3%). Malignancy, hepatobiliary disease and diabetes mellitus were common underlying diseases. The overall 30-day mortality rate was 20.6%. Shewanella was considered a definite causative pathogen in 7 patients, and a recurrent infection occurred in 2 patients. Colonization of the biliary tract was common. Among co-isolated pathogens, the enteric flora was most represented. All isolates were susceptible to ceftazidime and aminoglycosides, but 1 isolate was resistant to imipenem. In conclusion, Shewanella may become a colonizing bacterium, subsequently causing invasive diseases in patients with an underlying disease.


Assuntos
Infecções por Bactérias Gram-Positivas/epidemiologia , Infecções por Bactérias Gram-Positivas/fisiopatologia , Shewanella/efeitos dos fármacos , Shewanella/isolamento & purificação , Adulto , Idoso , Idoso de 80 Anos ou mais , Antibacterianos/farmacologia , Feminino , Infecções por Bactérias Gram-Positivas/microbiologia , Infecções por Bactérias Gram-Positivas/mortalidade , Hong Kong/epidemiologia , Humanos , Masculino , Testes de Sensibilidade Microbiana , Pessoa de Meia-Idade , Prognóstico , Estudos Retrospectivos , Fatores de Risco , Shewanella/classificação , Shewanella/patogenicidade
17.
Int J Infect Dis ; 14 Suppl 3: e261-4, 2010 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-20171131

RESUMO

We present the first case of human spondylodiscitis due to Shewanella algae. Our patient did not have any predisposing factors. The portal of entry was probably a cutaneous lesion on the leg, exposed to seawater. Bacteria were isolated in pure culture from a needle biopsy specimen of the vertebral disk. Automated identification systems identified the organism as Shewanella putrefaciens. However, molecular biology identified it as S. algae. Treatment with ceftriaxone and amikacin, then ciprofloxacin successfully addressed the infection. We also review four published cases of human osteoarticular infections caused by Shewanella spp: two cases of arthritis and two cases of osteomyelitis. Two patients had predisposing factors, and contact with water was found in two cases. The clinical, radiological and biological characteristics of S. algae spondylodiscitis are indistinguishable from those of spondylodiscitis of other causes. A cutaneous lesion with exposure to water is a potential portal of entry. Molecular typing is necessary to obtain a precise bacteriological identification.


Assuntos
Discite/etiologia , Infecções por Bactérias Gram-Negativas/etiologia , Shewanella/patogenicidade , Antibacterianos/uso terapêutico , Discite/diagnóstico , Discite/tratamento farmacológico , Infecções por Bactérias Gram-Negativas/diagnóstico , Infecções por Bactérias Gram-Negativas/tratamento farmacológico , Humanos , Vértebras Lombares , Imageamento por Ressonância Magnética , Masculino , Pessoa de Meia-Idade , Água do Mar/microbiologia , Shewanella/classificação , Shewanella/isolamento & purificação , Especificidade da Espécie
18.
Pediatr Infect Dis J ; 29(5): 475-7, 2010 May.
Artigo em Inglês | MEDLINE | ID: mdl-19952978

RESUMO

We present a case of ventriculitis and peritonitis in a child with ventriculoperitoneal shunt, which occurred 5 years after the surgery. The infection developed after contact with seawater and began as otitis. For the first time, Shewanella algae, a marine microorganism, was identified as the cause of ventriculoperitoneal shunt infection.


Assuntos
Infecções por Bactérias Gram-Negativas/diagnóstico , Shewanella/isolamento & purificação , Infecção da Ferida Cirúrgica/diagnóstico , Derivação Ventriculoperitoneal/efeitos adversos , Criança , Encefalite/complicações , Encefalite/diagnóstico , Encefalite/microbiologia , Infecções por Bactérias Gram-Negativas/microbiologia , Humanos , Masculino , Otite/complicações , Otite/diagnóstico , Otite/microbiologia , Peritonite/complicações , Peritonite/diagnóstico , Peritonite/microbiologia , Shewanella/classificação , Infecção da Ferida Cirúrgica/microbiologia
19.
Appl Microbiol Biotechnol ; 85(4): 1141-9, 2010 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-19789866

RESUMO

Increasing the ionic strength of the electrolyte in a microbial fuel cell (MFC) can remarkably increase power output due to the reduction of internal resistance. However, only a few bacterial strains are capable of producing electricity at a very high ionic strength. In this report, we demonstrate a newly isolated strain EP1, belonging to Shewanella marisflavi based on polyphasic analysis, which could reduce Fe(III) and generate power at a high ionic strength of up to 1,488 mM (8% NaCl) using lactate as the electron donor. Using this bacterium, a measured maximum power density of 3.6 mW/m(2) was achieved at an ionic strength of 291 mM. The maximum power density was increased by 167% to 9.6 mW/m(2) when ionic strength was increased to 1,146 mM. However, further increasing the ionic strength to 1,488 mM resulted in a decrease in power density to 5.2 mW/m(2). Quantification of the internal resistance distribution revealed that electrolyte resistance was greatly reduced from 1,178 to 50 Omega when ionic strength increased from 291 to 1,488 mM. These results indicate that isolation of specific bacterial strains can effectively improve power generation in some MFC applications.


Assuntos
Fontes de Energia Bioelétrica , Eletricidade , Shewanella/fisiologia , Fontes de Energia Bioelétrica/microbiologia , Impedância Elétrica , Compostos Férricos/metabolismo , Concentração Osmolar , Oxigênio , Filogenia , Shewanella/classificação , Shewanella/isolamento & purificação , Especificidade da Espécie
20.
Int J Syst Evol Microbiol ; 59(Pt 2): 336-40, 2009 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-19196774

RESUMO

Two strains of psychrotolerant bacteria, designated M7(T) and M5, isolated from Antarctic coastal marine environments were studied to determine their taxonomic position. The organisms comprised Gram-negative, rod-shaped, facultatively anaerobic cells that were motile by means of single polar flagella. Neither of the bacterial isolates had a requirement for Na(+). These two psychrotolerant strains grew at temperatures ranging from -4 to 30 degrees C. Both strains were capable of producing H(2)S from thiosulfate and were able to use sodium nitrate and trimethylamine N-oxide as terminal electron acceptors during anaerobic growth. 16S rRNA gene sequence analysis placed M7(T) and M5 within the genus Shewanella; the strains showed the highest similarity (99.9 and 99.2 % respectively) with respect to the type strains of Shewanella livingstonensis and Shewanella frigidimarina. However the levels of gyrB sequence similarity between strain M7(T) and the type strains of S. livingstonensis and S. frigidimarina were 87.6 and 87.4 %, respectively. DNA-DNA hybridization experiments performed between the Antarctic isolate M7(T) and S. livingstonensis LMG 19866(T) and S. frigidimarina LMG 19475(T) revealed levels of relatedness of 32 and 35 %, respectively. Strain M5 showed 100 % DNA relatedness with respect to strain M7(T). The DNA G+C content of these bacteria was 42 mol%. Several phenotypic characteristics, the cellular fatty acid compositions and the quinone content of strains M7(T) and M5 served to differentiate them from related shewanellae. On the basis of the data from this polyphasic taxonomic study, M7(T) and M5 constitute a single genospecies. They represent a novel species of the genus Shewanella, for which the name Shewanella vesiculosa sp. nov. is proposed. The type strain is M7(T) (=LMG 24424(T) =CECT 7339(T)).


Assuntos
Sedimentos Geológicos/microbiologia , Shewanella/classificação , Regiões Antárticas , DNA Girase/genética , Dados de Sequência Molecular , Filogenia , RNA Ribossômico 16S/genética , Shewanella/genética , Shewanella/isolamento & purificação , Especificidade da Espécie
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