The use of NH4+ rather than NO3- affects cell stoichiometry, C allocation, photosynthesis and growth in the cyanobacterium Synechococcus sp. UTEX LB 2380, only when energy is limiting.

The assimilation of N-NO3- requires more energy than that of N-NH4+ . This becomes relevant when energy is limiting and may impinge differently on cell energy budget depending on depth, time of the day and season. We hypothesize that N-limited and energy-limited cells of the oceanic cyanobacterium Synechococcus sp. differ in their response to the N source with respect to growth, elemental stoichiometry and carbon allocation. Under N limitation, cells retained almost absolute homeostasis of elemental and organic composition, and the use of NH4+ did not stimulate growth. When energy was limiting, however, Synechococcus grew faster in NH4+ than in NO3- and had higher C (20%), N (38%) and S (30%) cell quotas. Furthermore, more C was allocated to protein, whereas the carbohydrate and lipid pool size did not change appreciably. Energy limitation also led to a higher photosynthetic rate relative to N limitation. We interpret these results as an indication that, under energy limitation, the use of the least expensive N source allowed a spillover of the energy saved from N assimilation to the assimilation of other nutrients. The change in elemental stoichiometry influenced C allocation, inducing an increase in cell protein, which resulted in a stimulation of photosynthesis and growth.

The Presence of the IsiA-PSI Supercomplex Leads to Enhanced Photosystem I Electron Throughput in Iron-Starved Cells of Synechococcus sp. PCC 7002.

Photosystem I (PS I) is highly demanding of iron, requiring 12 atoms in the bound FX, FB, and FA iron-sulfur clusters and two atoms in the mobile acceptor protein ferredoxin. When grown under iron-limiting conditions, certain cyanobacteria express IsiA, a peripheral chlorophyll a antenna protein, and IsiB, a flavodoxin that substitutes for ferredoxin. The IsiA protein forms single and double rings around PS I, presumably to increase the optical cross-section so as to compensate for fewer PS I complexes. Previous studies have shown that IsiA serves as an efficient light-harvesting structure ( Andrizhievskaya , G. G. ; et al. Biochim. Biophys. Acta 2002 , 1556 , 262 - 272 ); however, few, if any, studies have been carried out to show that the increased optical cross-section leads to an enhanced rate of electron transfer through PS I. Here, we report a more rapid transient accumulation of the A1(-) phyllosemiquinone anion radical by EPR spectroscopy in dark-adapted iron-depleted cells than in iron-replete cells after a block of intense light. A derivative-shaped optical signal in the light-minus-dark difference spectrum of PS I from an electrochromic bandshift of a carotenoid located near the A1 phylloquinones is enhanced in iron-depleted wild-type cells and in an iron-depleted isiB deletion strain, which lacks flavodoxin, but is greatly diminished in an iron-depleted isiA deletion strain, which lacks IsiA and flavodoxin. These findings indicate that the transient accumulation of electrons on A1 occurs more rapidly in the IsiA/PS I supercomplex than in the PS I complex alone. Thus, the increased absorption cross-section from the IsiA proteins translates directly to an enhanced rate of electron transfer through PS I.

Structural basis and target-specific modulation of ADP sensing by the Synechococcus elongatus PII signaling protein.

PII signaling proteins comprise one of the most versatile signaling devices in nature and have a highly conserved structure. In cyanobacteria, PipX and N-acetyl-L-glutamate kinase are receptors of PII signaling, and these interactions are modulated by ADP, ATP, and 2-oxoglutarate. These effector molecules bind interdependently to three anti-cooperative binding sites on the trimeric PII protein and thereby affect its structure. Here we used the PII protein from Synechococcus elongatus PCC 7942 to reveal the structural basis of anti-cooperative ADP binding. Furthermore, we clarified the mutual influence of PII-receptor interaction and sensing of the ATP/ADP ratio. The crystal structures of two forms of trimeric PII, one with one ADP bound and the other with all three ADP-binding sites occupied, revealed significant differences in the ADP binding mode: at one site (S1) ADP is tightly bound through side-chain and main-chain interactions, whereas at the other two sites (S2 and S3) the ADP molecules are only bound by main-chain interactions. In the presence of the PII-receptor PipX, the affinity of ADP to the first binding site S1 strongly increases, whereas the affinity for ATP decreases due to PipX favoring the S1 conformation of PII-ADP. In consequence, the PII-PipX interaction is highly sensitive to subtle fluctuations in the ATP/ADP ratio. By contrast, the PII-N-acetyl-L-glutamate kinase interaction, which is negatively affected by ADP, is insensitive to these fluctuations. Modulation of the metabolite-sensing properties of PII by its receptors allows PII to differentially perceive signals in a target-specific manner and to perform multitasking signal transduction.

Observation of polyphosphate bodies and DNA during the cell division cycle of Synechococcus elongatus PCC 7942.

Although most cyanobacterial cells contain prominent polyphosphate bodies in the central cytoplasmic area enclosed by the peripheral thylakoid membranes, their roles are not fully understood. Storing phosphate for nucleotide production might be one of their important roles in survival of the cells. As a step towards identifying a possible contribution of the polyphosphate bodies to DNA synthesis, the relationship between polyphosphate bodies and DNA throughout cell division cycle of Synechococcus elongatus PCC 7942 cells cultured under light/dark cycles was investigated with light and electron microscopy. During the dark period, the average size of polyphosphate bodies increased gradually without significant change in their number and distribution. However, during the light period, the number of polyphosphate bodies increased, while the size of each polyphosphate body decreased and cells elongated until the end of the light period, when most cells divided. The ratio of the content of polyphosphate bodies to cell length increased gradually during the dark period and decreased during the light period. Hoechst 33342-stained DNA appeared diffuse during the dark period, but in the light period it became condensed and eventually formed a wavy, rope-like structure prior to cell division. Close association between fibres containing DNA and polyphosphate bodies was demonstrated by TEM using DNA-specific staining and BrdU labelling. These regular coordinated changes of polyphosphate bodies and DNA shape during the cell division cycle, together with their intimate interaction, imply a role of polyphosphate bodies in supplying material for DNA.

Synthesis and application of an environmentally insensitive Cy3-based arsenical fluorescent probe to identify adaptive microbial responses involving proximal dithiol oxidation.

Reversible disulfide oxidation between proximal cysteines in proteins represents a common regulatory control mechanism to modulate flux through metabolic pathways in response to changing environmental conditions. To enable in vivo measurements of cellular redox changes linked to disulfide bond formation, we have synthesized a cell-permeable thiol-reactive affinity probe (TRAP) consisting of a monosubstituted cyanine dye derivatized with arsenic (i.e., TRAP_Cy3) to trap and visualize dithiols in cytosolic proteins. Alkylation of reactive thiols prior to displacement of the bound TRAP_Cy3 by ethanedithiol permits facile protein capture and mass spectrometric identification of proximal reduced dithiols to the exclusion of individual cysteines. Applying TRAP_Cy3 to evaluate cellular responses to increases in oxygen and light levels in the photosynthetic microbe Synechococcus sp. PCC7002, we observe large decreases in the abundance of reduced dithiols in cellular proteins, which suggest redox-dependent mechanisms involving the oxidation of proximal disulfides. Under these same growth conditions that result in the oxidation of proximal thiols, there is a reduction in the abundance of post-translational oxidative protein modifications involving methionine sulfoxide and nitrotyrosine. These results suggest that the redox status of proximal cysteines responds to environmental conditions, acting to regulate metabolic flux and minimize the formation of reactive oxygen species to decrease oxidative protein damage.

Negative control of cell size in the cyanobacterium Synechococcus elongatus PCC 7942 by the essential response regulator RpaB.

The essential NblS-RpaB pathway for photosynthesis regulation and acclimatization to a variety of environmental conditions is the most conserved two-component system in cyanobacteria. To get insights into the RpaB implication in cell homeostasis we investigated the phenotypic impact of altering expression of the essential rpaB gene of Synechococcus elongatus PCC 7942 and determined the in vivo levels of the RpaB and RpaB~P polypeptides. Our results implicate non-phosphorylated RpaB in controlling cell length and shape and suggest that intrinsic regulation may be important to prevent drastic variations in RpaB levels and activity.

Spatial and temporal organization of chromosome duplication and segregation in the cyanobacterium Synechococcus elongatus PCC 7942.

The spatial and temporal control of chromosome duplication and segregation is crucial for proper cell division. While this process is well studied in eukaryotic and some prokaryotic organisms, relatively little is known about it in prokaryotic polyploids such as Synechococcus elongatus PCC 7942, which is known to possess one to eight copies of its single chromosome. Using a fluorescent repressor-operator system, S. elongatus chromosomes and chromosome replication forks were tagged and visualized. We found that chromosomal duplication is asynchronous and that the total number of chromosomes is correlated with cell length. Thus, replication is independent of cell cycle and coupled to cell growth. Replication events occur in a spatially random fashion. However, once assembled, replisomes move in a constrained manner. On the other hand, we found that segregation displays a striking spatial organization in some cells. Chromosomes transiently align along the major axis of the cell and timing of alignment was correlated to cell division. This mechanism likely contributes to the non-random segregation of chromosome copies to daughter cells.

Effect of 1.7 MHz ultrasound on a gas-vacuolate cyanobacterium and a gas-vacuole negative cyanobacterium.

Ultrasonic signals propagated through medium were directly applied to unicellular cyanobacterium cell surfaces to investigate the biological effects induced by ultrasound. The gas-vacuolate cyanobacterium Microcystis aeruginosa and the gas-vacuole negative cyanobacterium Synechococcus PCC 7942 responded differently to ultrasound. When M. aeruginosa was irradiated by 1.7 MHz ultrasound at 0.6 W cm(-2) every day, it showed a decrease of nearly 65% in biomass increment, and this group's generation time increased twice as much as the control. While Synechococcus culture irradiated every day still grew as fast as the control, and its final biomass was as much as the control. The value of the electric conductivity change (Deltasigma) sharply increased in Microcystis suspension during the exposure process, which revealed more ultrasonic cavitation yield in liquid related to the gas-vacuolate cyanobacteria. The relative malondialdehyde (MDA) content, a quantitative indicator of lipid peroxidation, increased by 65% in Microcystis cells and 9% in Synechoccus cells after ultrasonic irradiation. Moreover, the membrane permeability, quantified by measuring the relative amount of electrolyte leaking out of cells, increased to more than 60% in the Microcystis cells. The results indicated that Microcystis cells were susceptible to ultrasonic stress. According to Rayleigh-Plesset's bubble activation theory, 1.7 MHz ultrasound approached the eigenfrequency of gas-vacuolate cells. The present investigation suggested the importance of the cavitational effect relative to intracellular gas-vacuoles in the loss of cell viability. In summary, 1.7 MHz ultrasonic irradiation was effective in preventing water-bloom forming cyanobacteria from growing rapidly due to changes in the functioning and integrity of cellular and subcellular structures.