Species composition of testate amoebae in Lake Monte Alegre, Ribeirão Preto, SP, Brazil / Composição de amebas testáceas no lago Monte Alegre, Ribeirão Preto, SP, Brasil

We aimed to perform the first survey of testate amoebae community composition in Lake Monte Alegre at São Paulo state, and contribute to mitigate the taxonomic impediment regarding thediversity of testate amoebae in Brazil. Samplings were performed in 20 sampling sites within the lake, inthe limnetic and littoral regions in April 2015, using a 58 μm-meshplankton net. We identified 20 taxa oftestate amoebae belonging to four families: Arcellidae (8 taxa), Centropyxidae (4 taxa), Difflugiidae (7 taxa) and Lesquereusiidae (2 taxa). The littoral region showed the highest number of taxa (n = 20), whereas inthe limnetic region 11 taxa were registered. Therefore, our results evidenced the importance of testateamoebae in aquatic systems, and that further research, taxonomic and/or ecological, in those environmentsshould include these organisms in their investigation. Moreover, we suggest that future research with greater sampling effort is necessary to expand the identification of possible cryptic species in this environment.

O objetivo deste estudo foi realizar o primeiro levantamento da composição da comunidade de amebas testáceas no lago Monte Alegre no Estado de São Paulo e, assim, contribuir para mitigar oimpedimento taxonômico relacionado à diversidade de amebas testáceas no Brasil. As amostragens foramrealizadas em 20 pontos do lago, nas regiões limnética e litorânea, no mês de abril de 2015, com rede deplâncton de 58 μm de abertura de malha. Foram identificados 20 táxons de amebas testáceas, divididos emquatro famílias: Arcellidae (8 táxons), Centropyxidae (4 táxons), Difflugiidae (7 táxons) e Lesquereusiidae(2 táxons). A região litorânea apresentou o maior número de táxons (n = 20), enquanto que na regiãolimnética foram registrados 11 táxons. Diante disso, é possível indicar que os nossos resultados evidenciama importância das amebas testáceas nos sistemas aquáticos e que novos estudos, taxonômicos e/ou ecológicos, nesses ambientes devem incluir estes organismos em suas investigações. Além disso, sugeremsefuturos estudos com maior esforço amostral para ampliar a identificação de possíveis espécies crípticas noambiente.

Giant virus with a remarkable complement of genes infects marine zooplankton.

As major consumers of heterotrophic bacteria and phytoplankton, microzooplankton are a critical link in aquatic foodwebs. Here, we show that a major marine microflagellate grazer is infected by a giant virus, Cafeteria roenbergensis virus (CroV), which has the largest genome of any described marine virus (≈730 kb of double-stranded DNA). The central 618-kb coding part of this AT-rich genome contains 544 predicted protein-coding genes; putative early and late promoter motifs have been detected and assigned to 191 and 72 of them, respectively, and at least 274 genes were expressed during infection. The diverse coding potential of CroV includes predicted translation factors, DNA repair enzymes such as DNA mismatch repair protein MutS and two photolyases, multiple ubiquitin pathway components, four intein elements, and 22 tRNAs. Many genes including isoleucyl-tRNA synthetase, eIF-2γ, and an Elp3-like histone acetyltransferase are usually not found in viruses. We also discovered a 38-kb genomic region of putative bacterial origin, which encodes several predicted carbohydrate metabolizing enzymes, including an entire pathway for the biosynthesis of 3-deoxy-d-manno-octulosonate, a key component of the outer membrane in Gram-negative bacteria. Phylogenetic analysis indicates that CroV is a nucleocytoplasmic large DNA virus, with Acanthamoeba polyphaga mimivirus as its closest relative, although less than one-third of the genes of CroV have homologs in Mimivirus. CroV is a highly complex marine virus and the only virus studied in genetic detail that infects one of the major groups of predators in the oceans.