An independent evaluation in a CRC patient cohort of microbiome 16S rRNA sequence analysis methods: OTU clustering, DADA2, and Deblur.

Liu, Guang; Li, Tong; Zhu, Xiaoyan; Zhang, Xuanping; Wang, Jiayin

Liu, Guang; Li, Tong; Zhu, Xiaoyan; Zhang, Xuanping; Wang, Jiayin.

Afiliación

Liu G; School of Electronic and Information Engineering, Xi'an Jiaotong University, Xi'an, China.
Li T; Guangdong Hongyuan Pukong Medical Technology Co., Ltd., Guangzhou, China.
Zhu X; School of Bioscience and Bioengineering, South China University of Technology, Guangzhou, China.
Zhang X; School of Electronic and Information Engineering, Xi'an Jiaotong University, Xi'an, China.
Wang J; School of Electronic and Information Engineering, Xi'an Jiaotong University, Xi'an, China.

Front Microbiol ; 14: 1178744, 2023.

Article en En | MEDLINE | ID: mdl-37560524

Palabras clave

CRC; DADA2; Deblur; OTU clustering; comparison; denoising algorithms; gut microbiome

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Texto completo: 1 Colección: 01-internacional Tipo de estudio: Prognostic_studies Idioma: En Revista: Front Microbiol Año: 2023 Tipo del documento: Article País de afiliación: China

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