A cancer graph: a lung cancer property graph database in Neo4j.
BMC Res Notes
; 15(1): 45, 2022 Feb 14.
Article
em En
| MEDLINE
| ID: mdl-35164854
ABSTRACT
OBJECTIVES:
A novel graph data model of non-small cell lung cancer clinical and genomic data has been constructed with twoaims:
(1) provide a suitable model for facilitating graph analytics within the Neo4j framework or through tools which can interact through existing Neo4j APIs; and (2) provide a base model extensible to other cancer types and additional datasets such as those derived from electronic health records and other real world sources. DATA DESCRIPTION Clinical and genomic data integrated with a novel property graph database schema from publicly available datasets and analyses based on The Cancer Genome Atlas lung cancer datasets augmented by with subgraphs patient-patient social network from similarity and correlation as well as individual based biological networks.Palavras-chave
Texto completo:
1
Coleções:
01-internacional
Temas:
Geral
/
Tipos_de_cancer
/
Pulmao
Base de dados:
MEDLINE
Assunto principal:
Carcinoma Pulmonar de Células não Pequenas
/
Neoplasias Pulmonares
Limite:
Humans
Idioma:
En
Revista:
BMC Res Notes
Ano de publicação:
2022
Tipo de documento:
Article
País de afiliação:
Estados Unidos