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GCRS: A hybrid graph convolutional network for risk stratification in multiple myeloma cancer patients.
Sagar, Dikshant; Aggarwal, Priya; Farswan, Akanksha; Gupta, Ritu; Gupta, Anubha.
Afiliação
  • Sagar D; SBILab, Department of ECE, Indraprastha Institute of Information Technology, New Delhi, India.
  • Aggarwal P; Vehant Technology Pvt. Ltd., Noida, India.
  • Farswan A; SBILab, Department of ECE, Indraprastha Institute of Information Technology, New Delhi, India.
  • Gupta R; Laboratory Oncology Unit, Dr. B.R.A. IRCH, AIIMS, New Delhi, India. Electronic address: drritugupta@gmail.com.
  • Gupta A; SBILab, Department of ECE, Indraprastha Institute of Information Technology, New Delhi, India. Electronic address: anubha@iiitd.ac.in.
Comput Biol Med ; 149: 106048, 2022 10.
Article em En | MEDLINE | ID: mdl-36113255
In this study, we present an efficient Graph Convolutional Network based Risk Stratification system (GCRS) for cancer risk-stage prediction of newly diagnosed multiple myeloma (NDMM) patients. GCRS is a hybrid graph convolutional network consisting of a fusion of multiple connectivity graphs that are used to learn the latent representation of topological structures among patients. This proposed risk stratification system integrates these connectivity graphs prepared from the clinical and laboratory characteristics of NDMM cancer patients for partitioning them into three cancer risk groups: low, intermediate, and high. Extensive experiments demonstrate that GCRS outperforms the existing state-of-the-art methods in terms of C-index and hazard ratio on two publicly available datasets of NDMM patients. We have statistically validated our results using the Cox Proportional-Hazards model, Kaplan-Meier analysis, and log-rank test on progression-free survival (PFS) and overall survival (OS). We have also evaluated the contribution of various clinical parameters as utilized by the GCRS risk stratification system using the SHapley Additive exPlanations (SHAP) analysis, an interpretability algorithm for validating AI methods. Our study reveals the utility of the deep learning approach in building a robust system for cancer risk stage prediction.
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Texto completo: 1 Coleções: 01-internacional Temas: Geral / Tipos_de_cancer / Outros_tipos Base de dados: MEDLINE Assunto principal: Mieloma Múltiplo Tipo de estudo: Etiology_studies / Prognostic_studies / Risk_factors_studies Limite: Humans Idioma: En Revista: Comput Biol Med Ano de publicação: 2022 Tipo de documento: Article País de afiliação: Índia

Texto completo: 1 Coleções: 01-internacional Temas: Geral / Tipos_de_cancer / Outros_tipos Base de dados: MEDLINE Assunto principal: Mieloma Múltiplo Tipo de estudo: Etiology_studies / Prognostic_studies / Risk_factors_studies Limite: Humans Idioma: En Revista: Comput Biol Med Ano de publicação: 2022 Tipo de documento: Article País de afiliação: Índia