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1.
Ocul Immunol Inflamm ; 31(8): 1640-1646, 2023 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-35816022

RESUMO

PURPOSE: To evaluate the frequency of Human adenovirus (HAdV) and its serotypes in keratoconjunctivitis patients who attended the outpatient clinics of Mansoura Ophthalmic Center, Egypt. METHODS: Conjunctival secretions and corneal scrapings were collected from patients complaining of clinically diagnosed viral keratoconjunctivitis. The molecular method for HAdV detection was performed by polymerase chain reaction (PCR) followed by restriction enzymes (REA) determination of serotypes for hexone gene. RESULTS: HAdV infection was detected in 38% of samples. There were 4 serotypes of Human adenovirus species D (HAdV-D) isolated (4, 8, 37, 3), where HAdV-D8 was the most dominant. Contact with infected patient, follicular conjunctivitis and subepithelial corneal infiltrates are useful features for clinical diagnosis of adenoviral conjunctivitis. CONCLUSION: HAdV was significant etiological factor of acute follicular conjunctivitis. Accurate diagnosis of adenoviral conjunctivitis is essential for appropriate management, reducing permanent visual impairment and to limit the transmission of the virus within the community.


Assuntos
Adenovírus Humanos , Conjuntivite Viral , Conjuntivite , Ceratoconjuntivite , Humanos , Egito/epidemiologia , Ceratoconjuntivite/diagnóstico , Ceratoconjuntivite/epidemiologia , Conjuntivite Viral/diagnóstico , Conjuntivite Viral/epidemiologia , Túnica Conjuntiva , Adenovírus Humanos/genética , DNA Viral/genética , DNA Viral/análise
2.
Waste Manag ; 138: 308-317, 2022 Feb 01.
Artigo em Inglês | MEDLINE | ID: mdl-34922305

RESUMO

Leachate is a variable effluent from waste management systems generated during waste collection and on landfills. Twenty-two leachate samples from waste collection trucks and a landfill were collected from March to December 2019 in the municipality of Rio de Janeiro (Brazil) and were analyzed for Human Adenovirus (HAdV), bacterial indicators and physico-chemical parameters. For viral analysis, samples were concentrated by ultracentrifugation and processed for molecular analysis using QIAamp Fast DNA Stool mini kit® for DNA extraction followed by nested-PCR and qPCR/PMA-qPCR TaqMan® system. HAdV was detected by nested-PCR in 100% (9/9) and 83.33% (12/13) of the truck and landfill leachate samples, respectively. Viral concentrations ranged from 8.31 × 101 to 6.68 × 107 genomic copies per 100 ml by qPCR and PMA-qPCR. HAdV species A, B, C, and F were characterized using nucleotide sequencing. HAdV were isolated in A549 culture cells in 100% (9/9) and 46.2% (6/13) from truck and landfill leachate samples, respectively. Regardless of the detection methods, HAdV concentration was predicted by the quantity of total suspended solids. A quantitative microbial risk assessment was performed to measure the probability of gastrointestinal (GI) illness attributable to inadvertent oral ingestion of truck leachate, revealing the higher probability of disease for the direct splashing into the oral cavity (58%) than for the gloved hand-to-mouth (33%). In a scenario where waste collectors do not wear gloves as protective personal equipment, the risk increases to 67%. This is the first study revealing infectious HAdV in solid waste leachate and indicates a potential health risk for waste collectors.


Assuntos
Adenovírus Humanos , Eliminação de Resíduos , Poluentes Químicos da Água , Adenovírus Humanos/genética , Brasil , Humanos , Medição de Risco , Resíduos Sólidos/análise , Instalações de Eliminação de Resíduos , Poluentes Químicos da Água/análise
3.
JAMA Ophthalmol ; 139(5): 518-524, 2021 05 01.
Artigo em Inglês | MEDLINE | ID: mdl-33792644

RESUMO

IMPORTANCE: Adenoviral conjunctivitis is highly contagious, can be associated with systemic infections, and can cause chronic visual impairment. It accounts for a large proportion of acute conjunctivitis. Outbreaks of epidemic keratoconjunctivitis (EKC) are costly in terms of productivity loss from work furloughs and spread to patients and have resulted in clinic and departmental closures. OBJECTIVE: To examine the institutional cost savings of a policy to diagnose adenoviral conjunctivitis and triage and furlough medical center employees with this condition to prevent outbreaks. DESIGN, SETTING, AND PARTICIPANTS: This quality improvement study assessed Johns Hopkins Medicine employees with red eye from November 1, 2011, through October 31, 2018, who were triaged at the occupational health clinic whose conditions were diagnosed using polymerase chain reaction (PCR) validated for adenoviral conjunctivitis. INTERVENTIONS: Only employees with positive PCR test results were furloughed, with furlough length tailored to subtype (a minimum of 2 weeks for EKC and 1 week otherwise). MAIN OUTCOMES AND MEASURES: Total number of furloughs avoided and cost savings associated with reducing unnecessary furloughs. RESULTS: Of 2142 employees with red eye, 1520 (71.0%) underwent PCR testing; 130 (8.6%) had positive adenoviral PCR test results, of whom 41 (31.5%) had EKC. Furloughing 130 employees with positive PCR test results vs furloughing all 1520 employees clinically suspected of having adenoviral conjunctivitis represented an estimated annual savings of $442 073, or $3 094 511 during 7 years. The cost of performing PCR on employees suspected of having adenoviral conjunctivitis was 5.0% of the cost associated with furloughing all employees with red eye. No outbreaks occurred. CONCLUSIONS AND RELEVANCE: In this quality improvement study, this policy, notable for development and use of PCR for adenoviral conjunctivitis on a large scale, resulted in substantial cost savings from fewer work furloughs compared with the number of employees who would have been furloughed based on clinical diagnosis. These results may provide impetus for policy adoption by other institutions and for development of a rapid, sensitive, and specific diagnostic test for adenoviral conjunctivitis.


Assuntos
Infecções por Adenovirus Humanos , Adenovírus Humanos , Conjuntivite Viral , Centros Médicos Acadêmicos , Infecções por Adenovirus Humanos/diagnóstico , Infecções por Adenovirus Humanos/epidemiologia , Infecções por Adenovirus Humanos/prevenção & controle , Adenovírus Humanos/genética , Conjuntivite Viral/diagnóstico , Conjuntivite Viral/prevenção & controle , Redução de Custos , Humanos , Políticas
4.
Food Environ Virol ; 12(2): 130-136, 2020 06.
Artigo em Inglês | MEDLINE | ID: mdl-32152895

RESUMO

The availability of drinking water is one of the main determinants of quality of life, disease prevention and the promotion of health. Viruses are important agents of waterborne diseases and have been described as important markers of human faecal contamination. This study aimed to investigate viruses' presence as an indicator of drinking water quality in low-income communities in the Manguinhos area, Rio de Janeiro, Brazil. Three hundred and four drinking water samples (2L/each) were collected along the drinking water distribution-to-consumption pathway in households, as well as healthcare and school units. Water samples were collected both directly from the water supply prior to distribution and after storage in tanks and filtration units. Using qPCR, viruses were detected 50 times in 45 water samples (15%), 19 of these being human adenovirus, 17 rotavirus A and 14 norovirus GII. Viral loads recovered ranged from 5E+10 to 8.7E+106 genome copies/Liter. Co-detection was observed in five household water samples and there was no difference regarding virus detection across sampling sites. Precarious and inadequate environmental conditions characterized by the lack of local infrastructure regarding basic sanitation and waste collection in the territory, as well as negligent hygiene habits, could explain viral detection in drinking water in regions with a water supply system.


Assuntos
Adenovírus Humanos/isolamento & purificação , Água Potável/virologia , Gastroenterite/virologia , Norovirus/isolamento & purificação , Rotavirus/isolamento & purificação , Adenovírus Humanos/classificação , Adenovírus Humanos/genética , Adenovírus Humanos/crescimento & desenvolvimento , Brasil/epidemiologia , Água Potável/análise , Gastroenterite/economia , Gastroenterite/epidemiologia , Humanos , Higiene , Norovirus/classificação , Norovirus/genética , Norovirus/crescimento & desenvolvimento , Pobreza , Qualidade de Vida , Características de Residência/estatística & dados numéricos , Rotavirus/classificação , Rotavirus/genética , Rotavirus/crescimento & desenvolvimento , Qualidade da Água , Abastecimento de Água/economia
5.
Diagn Microbiol Infect Dis ; 95(4): 114885, 2019 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-31607514

RESUMO

Adenoviral epidemic keratoconjunctivitis (EKC) is a major cause of ocular morbidity worldwide and specific antiviral therapies are not available. EKC is primarily caused by Human adenovirus D (HAdV-D) types 8, 37, 53, 54, 56 and 64. Considering the genomic variation in HAdV-D, we hypothesized that clinical signs could be differentiated by virus type. The hypothesis was retrospectively tested with clinical signs recorded from 250 patients with ocular infections visiting an ophthalmological clinic in southern Japan between 2011 and 2014. The results showed that conjunctival opacity, corneal epithelial disorders and pre-auricular lymphadenopathy, were more frequently associated with EKC than other ocular infections. Furthermore, HAdV types 8, 37 and 54, caused corneal complications and longer infections significantly more frequently than infections by types 53 and 56 (P < 0.05). Our descriptive results supported that symptoms severity vary with the infecting type, however, further research is needed to improve diagnosis of EKC.


Assuntos
Infecções por Adenovirus Humanos/epidemiologia , Infecções por Adenovirus Humanos/patologia , Adenovírus Humanos/fisiologia , Ceratoconjuntivite/epidemiologia , Ceratoconjuntivite/patologia , Células A549 , Infecções por Adenovirus Humanos/virologia , Adenovírus Humanos/classificação , Adenovírus Humanos/genética , Adenovírus Humanos/isolamento & purificação , Adolescente , Adulto , Distribuição por Idade , Idoso , Idoso de 80 Anos ou mais , Criança , Pré-Escolar , Efeito Citopatogênico Viral , Humanos , Lactente , Japão/epidemiologia , Ceratoconjuntivite/virologia , Pessoa de Meia-Idade , Tipagem Molecular , Estudos Retrospectivos , Adulto Jovem
6.
Appl Microbiol Biotechnol ; 103(19): 8115-8125, 2019 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-31435714

RESUMO

Sensitive and rapid methods for determining viral contamination of water are critical, since illness can be caused by low numbers of viruses and bacterial indicators do not adequately predict viral loads. We developed novel rapid assays for detecting the viral water quality indicator human adenovirus (HAdV). A simple 15-min recombinase polymerase amplification step followed by a 5-min lateral flow detection is used. Species-specific assays were developed to discriminate HAdV A, B, C and F, and combined into a multiplex test (Ad-FAC). Species-specific assays enabled detection of 10-50 copies of the HAdV plasmid. Sample testing using methods optimised for wastewater analysis indicated the Ad-FAC assay showed 100% sensitivity and 100% specificity when compared with HAdV qPCR, with a detection limit as low as 50 gene copies. This is the first study to demonstrate the use of RPA for detecting enteric viruses in water samples, to assess virological water quality. The ability to rapidly detect enteric virus contamination of water could assist in more effective management of water safety and better protection of public health.


Assuntos
Adenovírus Humanos/isolamento & purificação , Técnicas de Amplificação de Ácido Nucleico/métodos , Carga Viral/métodos , Microbiologia da Água , Qualidade da Água , Adenovírus Humanos/genética , Sensibilidade e Especificidade , Fatores de Tempo
7.
J Food Sci ; 84(8): 2256-2260, 2019 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-31334844

RESUMO

Human adenoviruses (HAdVs) are the foodborne enteric pathogens transmitted by the consumption of contaminated shellfish. In this study, the occurrence of enteric adenoviruses in finfish and shellfish was investigated by virus concentration and polymerase chain reaction (PCR). Total plate count, total coliform, and fecal coliform levels were determined and correlated with the presence of adenovirus. Samples of fish, bivalve mollusks, crustaceans, and cephalopods were collected from supermarkets, landing centers, and retail fish markets of Mumbai, India for the study. Overall, the adenovirus DNA was detected in 21.27% of all the samples analyzed. The highest incidence was detected in clams (14.89%), followed by oysters, shrimps, and finfish (2.13% each). High prevalence of enteric adenovirus in filter-feeding bivalves, such as clams and oysters, as well as in fish suggests persistent fecal contamination of coastal waters in the region of study. The occurrence of adenoviruses in samples showed a positive correlation with the bacteriological indicators of fecal contamination, suggesting that fecal indicator bacteria may be used to monitor the presence of adenoviruses in seafood. PRACTICAL APPLICATION: This research demonstrates the occurrence of human adenoviruse (HAdV) in fresh seafood and the utility of fecal coliforms as indicators of HAdV presence in seafood. The study emphasizes the need to identify HAdV in seafood as a human health hazard and implement measures to prevent sewage pollution of fish and shellfish harvesting areas in India.


Assuntos
Adenovírus Humanos/isolamento & purificação , Frutos do Mar/virologia , Adenovírus Humanos/classificação , Adenovírus Humanos/genética , Animais , Bivalves/virologia , Peixes/virologia , Contaminação de Alimentos/análise , Humanos , Índia , Ostreidae/virologia , Esgotos/virologia , Frutos do Mar/economia
8.
Food Environ Virol ; 11(3): 309-313, 2019 09.
Artigo em Inglês | MEDLINE | ID: mdl-30972691

RESUMO

The purpose of this study is to assess the overall impact of different anthropogenic activities in the Vouraikos River basin (southwestern Greece, Natura 2000 area). Virological quality of river water samples was investigated. Positive samples for human adenoviruses were found occasionally, while porcine adenoviruses and bovine polyoma viruses were not detected. It is the first time that virological data are collected in the study area.


Assuntos
Adenovírus Humanos/isolamento & purificação , Rios/virologia , Adenovírus Humanos/classificação , Adenovírus Humanos/genética , Monitoramento Ambiental , Grécia , Humanos , Poluição da Água/análise , Poluição da Água/estatística & dados numéricos
9.
Water Res ; 137: 273-280, 2018 06 15.
Artigo em Inglês | MEDLINE | ID: mdl-29550730

RESUMO

Waterborne, food-borne and sewage-borne pathogens are a major global concern, with the annual recurrence, most notably during the summer, of outbreaks of gastroenteritis of unconfirmed etiology associated with recreational activities in marine environments. The consumption of contaminated water-based foodstuffs is also related to outbreaks of human illness. The main goals of the present study were: i) to identify the genetic assemblages of Giardia duodenalis cysts in growing and depurated oysters destined for human consumption on the southern coast of São Paulo, Brazil; ii) to verify the main circulating G. duodenalis assemblages and their subtypes in different brackish waters used for the production of mollusks and for recreational purposes; iii) to track the contamination of growing and depurated oysters by the human adenovirus and identify the infectivity of adenoviral particles recovered from oysters before and after depuration; iv) to evaluate the occurrence and genotype of the free-living amoebae of the genus Acanthamoeba in brackish water and oysters from all the sites described above. Four sampling sites in the Cananeia estuary were selected to search for pathogenic and amphizoic protozoa (Giardia and Acanthamoeba respectively): site 1: oyster growth, site 2: catchment water (before UV depuration procedure), site 3: filter backwash (filtration stage of water treatment) and site 4: oyster depuration tank. Oysters at sites 1 and 4 were evaluated for the presence of adenovirus (HAdV). Analysis consisted of conventional microbiological as well as molecular methods. Giardia duodenalis were detected in all the water sites analyzed and the molecular analysis revealed that sub-assemblage AII was the most frequently distributed throughout the estuarine environment, although one sample was identified as belonging to the assemblage C. Acanthamoeba were also isolated from different locations of the estuarine area, and were detected at all the analyzed sites. The majority of isolates belonged to the T3 genotype, while the T4 genotype was identified once. The sequencing reaction of Giardia duodenalis revealed the contamination of three batches of depurated oysters by the sub-assemblage AII. With respect to viruses, seven batches of oysters (four growing and three depurated) were found to be harboring infectious HAdV particles when submitted to plaque assay. Overall, the results of the sequencing reactions combined with the plaque assay revealed that the isolates of Giardia duodenalis and the infectious HAdV particles identified in oyster tissues have the potential to infect humans and pose a threat if consumed raw or lightly cooked. This is the first report on the sub-assemblage AII identified in oysters which are submitted to a cleaning and disinfection procedure prior to human consumption in Brazil. Acanthamoeba specific genotypes were also identified for the first time in a recreational estuarine area in Brazil, contributing to knowledge of their molecular and environmental epidemiology, which is considered scarce even in marine and estuarine areas of the world.


Assuntos
Acanthamoeba/isolamento & purificação , Adenovírus Humanos/isolamento & purificação , Giardia lamblia/isolamento & purificação , Ostreidae/microbiologia , Acanthamoeba/genética , Adenovírus Humanos/genética , Adenovírus Humanos/patogenicidade , Animais , Brasil , Monitoramento Ambiental , Estuários , Contaminação de Alimentos/análise , Genótipo , Giardia lamblia/genética , Humanos , Poluição da Água , Purificação da Água
10.
Virology ; 516: 102-107, 2018 03.
Artigo em Inglês | MEDLINE | ID: mdl-29331865

RESUMO

The exterior minor protein IX of adenoviruses (AdVs) is a frequent target of attachment of antigens and the modified AdVs are being used as potent vaccine platforms. The organization of protein IX is disticntly different between human adenoviruses (HAdVs) and non-HAdVs. The analysis of solvent accessibility, based on the near atomic resolution structures, suggests that the C-terminal residues of IX are more accessible in non-HAdVs (e.g., bovine adenovirus) than in HAdVs. Although the C-terminal fusions of IX are displayed on the capsid surface, they could disrupt the formation of tetrameric coiled-coils (4-HLXB) in HAdVs due to steric hinderance, thereby potentially affecting the capsid stability. Importantly, the parallel-antiparallel arrangement of helices seen in the 4-HLXB is not condusive for IX C-terminal fusions in HAdVs. In contrast, the parallel trimeric C-terminal coiled-coils in non-HAdVs are unlikely to be affected by the attachment of antigens and more efficiently displayed on the AdV surface.


Assuntos
Infecções por Adenovirus Humanos/virologia , Adenovírus Humanos/metabolismo , Proteínas do Capsídeo/química , Proteínas do Capsídeo/metabolismo , Adenovírus Humanos/química , Adenovírus Humanos/genética , Capsídeo/metabolismo , Proteínas do Capsídeo/genética , Humanos , Modelos Moleculares , Domínios Proteicos , Estrutura Secundária de Proteína
11.
Water Res ; 129: 460-469, 2018 02 01.
Artigo em Inglês | MEDLINE | ID: mdl-29182907

RESUMO

Here, we evaluated the removal of three representative human enteric viruses - adenovirus (AdV) type 40, coxsackievirus (CV) B5, and hepatitis A virus (HAV) IB - and one surrogate of human caliciviruses - murine norovirus (MNV) type 1 - by coagulation-rapid sand filtration, using water samples from eight water sources for drinking water treatment plants in Japan. The removal ratios of a plant virus (pepper mild mottle virus; PMMoV) and two bacteriophages (MS2 and φX174) were compared with the removal ratios of human enteric viruses to assess the suitability of PMMoV, MS2, and φX174 as surrogates for human enteric viruses. The removal ratios of AdV, CV, HAV, and MNV, evaluated via the real-time polymerase chain reaction (PCR) method, were 0.8-2.5-log10 when commercially available polyaluminum chloride (PACl, basicity 1.5) and virgin silica sand were used as the coagulant and filter medium, respectively. The type of coagulant affected the virus removal efficiency, but the age of silica sand used in the rapid sand filtration did not. Coagulation-rapid sand filtration with non-sulfated, high-basicity PACls (basicity 2.1 or 2.5) removed viruses more efficiently than the other aluminum-based coagulants. The removal ratios of MS2 were sometimes higher than those of the three human enteric viruses and MNV, whereas the removal ratios of φX174 tended to be smaller than those of the three human enteric viruses and MNV. In contrast, the removal ratios of PMMoV were similar to and strongly correlated with those of the three human enteric viruses and MNV. Thus, PMMoV appears to be a suitable surrogate for human enteric viruses for the assessment of the efficacy of coagulation-rapid sand filtration to remove viruses.


Assuntos
Água Potável/virologia , Purificação da Água/métodos , Adenovírus Humanos/genética , Adenovírus Humanos/isolamento & purificação , Hidróxido de Alumínio , Bacteriófago phi X 174/genética , Bacteriófago phi X 174/isolamento & purificação , Enterovirus Humano B/genética , Enterovirus Humano B/isolamento & purificação , Filtração/métodos , Vírus da Hepatite A/genética , Vírus da Hepatite A/isolamento & purificação , Humanos , Japão , Levivirus/genética , Levivirus/isolamento & purificação , Norovirus/genética , Norovirus/isolamento & purificação , Reação em Cadeia da Polimerase em Tempo Real , Dióxido de Silício , Tobamovirus/genética , Tobamovirus/isolamento & purificação
12.
J Virol Methods ; 249: 156-160, 2017 11.
Artigo em Inglês | MEDLINE | ID: mdl-28918074

RESUMO

Adenoviruses are characterized by a large variability, reflected by their classification in species A to G. Certain species, eg A and C, could be associated with increased clinical severity, both in immunocompetent and immunocompromised hosts suggesting that in some instances species identification provides clinically relevant information. Here we designed a novel "pVI rapid typing method" to obtain quick, simple and cost effective species assignment for Adenoviruses, thanks to combined fusion temperature (Tm) and amplicon size analysis. Rapid typing results were compared to Sanger sequencing in the hexon gene for 140 Adenovirus-positive clinical samples included in the Typadeno study. Species A and C could be identified with a 100% positive predictive value, thus confirming the value of this simple typing method.


Assuntos
Infecções por Adenovirus Humanos/diagnóstico , Adenovírus Humanos/classificação , Adenovírus Humanos/isolamento & purificação , Técnicas de Genotipagem , Reação em Cadeia da Polimerase/métodos , Infecções por Adenovirus Humanos/virologia , Adenovírus Humanos/genética , Primers do DNA , Humanos , Imunocompetência , Hospedeiro Imunocomprometido , Reação em Cadeia da Polimerase/economia , Valor Preditivo dos Testes , Sensibilidade e Especificidade , Análise de Sequência de DNA , Temperatura de Transição
13.
Int J Food Microbiol ; 217: 14-9, 2016 Jan 18.
Artigo em Inglês | MEDLINE | ID: mdl-26476572

RESUMO

Skimmed milk organic flocculation method was adapted, optimized and compared with polyethylene glycol (PEG) precipitation and filtration methods for recovering viruses from a strawberry matrix. Spiking experiments with norovirus genogroup II genotype 4 (NoV GII.4) and murine norovirus 1 (MNV-1) demonstrated that the organic flocculation method associated with a glycine elution buffer, filter bag and cetyltrimethylammonium bromide (CTAB) showed a recovery percentage of 2.5 and 32 times higher than PEG precipitation and filtration methodologies for NoV recovering. Furthermore, this method was used for investigating NoV and human adenoviruses (HAdVs) in 90 samples of fresh strawberries commercialized in Rio de Janeiro markets. NoV GI and GII were not detected in those samples and MNV-1, used as internal process control (IPC), was recovered in 95.5% (86) of them. HAdVs were detected in 18 (20.0%) samples and characterized by nucleotide sequencing as Human Mastadenovirus specie F and as type specie HAdV-2. Bacterial analysis did not detect Salmonella spp. and Listeria monocytogenes, however, 3.3% of fecal coliforms were detected in those samples. These results indicate the organic flocculation method as an alternative for recovering enteric viruses from strawberries, emphasizing a need for virus surveillance in food matrices.


Assuntos
Adenovírus Humanos/isolamento & purificação , Contaminação de Alimentos/análise , Fragaria/virologia , Leite/química , Norovirus/isolamento & purificação , Polietilenoglicóis/química , Adenovírus Humanos/genética , Animais , Sequência de Bases , DNA Viral/genética , Enterovirus , Fezes/microbiologia , Fezes/virologia , Floculação , Microbiologia de Alimentos , Humanos , Listeria monocytogenes/genética , Listeria monocytogenes/isolamento & purificação , Norovirus/genética , RNA Viral/genética , Salmonella/genética , Salmonella/isolamento & purificação , Análise de Sequência de DNA
14.
PLoS One ; 9(11): e112029, 2014.
Artigo em Inglês | MEDLINE | ID: mdl-25409012

RESUMO

BACKGROUND & OBJECTIVE: Recreational waters impacted by fecal contamination have been linked to gastrointestinal illness in swimmer populations. To date, few epidemiologic studies examine the risk for swimming-related illnesses based upon simultaneous exposure to more than one microbial surrogate (e.g. culturable E. coli densities, genetic markers). We addressed this research gap by investigating the association between swimming-related illness frequency and water quality determined from multiple bacterial and viral genetic markers. METHODS: Viral and bacterial genetic marker densities were determined from beach water samples collected over 23 weekend days and were quantified using quantitative polymerase chain reaction (qPCR). These genetic marker data were paired with previously determined human exposure data gathered as part of a cohort study carried out among beach users at East Fork Lake in Ohio, USA in 2009. Using previously unavailable genetic marker data in logistic regression models, single- and multi-marker/multi-water quality indicator approaches for predicting swimming-related illness were evaluated for associations with swimming-associated gastrointestinal illness. RESULTS: Data pertaining to genetic marker exposure and 8- or 9-day health outcomes were available for a total of 600 healthy susceptible swimmers, and with this population we observed a significant positive association between human adenovirus (HAdV) exposure and diarrhea (odds ratio  = 1.6; 95% confidence interval: 1.1-2.3) as well as gastrointestinal illness (OR  = 1.5; 95% CI: 1.0-2.2) upon adjusting for culturable E. coli densities in multivariable models. No significant associations between bacterial genetic markers and swimming-associated illness were observed. CONCLUSIONS: This study provides evidence that a combined measure of recreational water quality that simultaneously considers both bacterial and viral densities, particularly HAdV, may improve prediction of disease risk than a measure of a single agent in a beach environment likely influenced by nonpoint source human fecal contamination.


Assuntos
Adenovírus Humanos/isolamento & purificação , Diarreia/microbiologia , Escherichia coli/isolamento & purificação , Gastroenteropatias/microbiologia , Lagos/microbiologia , Qualidade da Água/normas , Adenovírus Humanos/genética , Adolescente , Adulto , Criança , Pré-Escolar , Estudos de Coortes , Diarreia/virologia , Escherichia coli/genética , Feminino , Gastroenteropatias/virologia , Marcadores Genéticos , Humanos , Lagos/virologia , Masculino , Pessoa de Meia-Idade , Natação , Adulto Jovem
15.
Biomed Res Int ; 2014: 363790, 2014.
Artigo em Inglês | MEDLINE | ID: mdl-24734232

RESUMO

Restriction endonuclease analyses (REAs) constitute the only inexpensive molecular approach capable of typing and characterizing human adenovirus (HAdV) strains based on the entire genome. However, the application of this method is limited by the need for time-consuming and labor-intensive procedures. We herein developed a simple and cost-effective REA for assessing HAdV. The method consists of (1) simple and cost-effective DNA extraction, (2) fast restriction endonuclease (RE) digestion, and (3) speedy mini agarose gel electrophoresis. In this study, DNA was isolated according to the kit-based method and 21.0 to 28.0 µg of viral DNA was extracted from prototypes (HAdV-1, HAdV-3, HAdV-4, and HAdV-37) in each flask. The amount of DNA ranged from 11.4 to 57.0 µg among the HAdV-3 (n=73) isolates. The obtained viral DNA was found to be applicable to more than 10 types of REAs. Fast-cut restriction endonucleases (REs) were able to digest the DNA within 15 minutes, and restriction fragments were easily separated via horizontal mini agarose gel electrophoresis. The whole procedure for 10 samples can be completed within approximately six hours (the conventional method requires at least two days). These results show that our REA is potentially applicable in many laboratories in which HAdVs are isolated.


Assuntos
Adenovírus Humanos/genética , Enzimas de Restrição do DNA/química , Mapeamento por Restrição/métodos , Linhagem Celular Tumoral , Enzimas de Restrição do DNA/economia , DNA Viral/química , Eletroforese em Gel de Ágar/economia , Eletroforese em Gel de Ágar/métodos , Genoma , Genoma Viral , Humanos , Proibitinas , Especificidade da Espécie
16.
Food Environ Virol ; 6(2): 87-98, 2014 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-24676673

RESUMO

Buffalo River is an important water resource in the Eastern Cape Province of South Africa. The potential risks of infection constituted by exposure to human enteric viruses in the Buffalo River and three source water dams along its course were assessed using mean values and static quantitative microbial risk assessment (QMRA). The daily risks of infection determined by the exponential model [for human adenovirus (HAdV) and enterovirus (EnV)] and the beta-Poisson model (for hepatitis A virus (HAV) and rotavirus (RoV)) varied with sites and exposure scenario. The estimated daily risks of infection values at the sites where the respective viruses were detected, ranged from 7.31 × 10(-3) to 1 (for HAdV), 4.23 × 10(-2) to 6.54 × 10(-1) (RoV), 2.32 × 10(-4) to 1.73 × 10(-1) (HAV) and 1.32 × 10(-4) to 5.70 × 10(-2) (EnV). The yearly risks of infection in individuals exposed to the river/dam water via drinking, recreational, domestic or irrigational activities were unacceptably high, exceeding the acceptable risk of 0.01% (10(-4) infection/person/year), and the guideline value used as by several nations for drinking water. The risks of illness and death from infection ranged from 6.58 × 10(-5) to 5.0 × 10(-1) and 6.58 × 10(-9) to 5.0 × 10(-5), respectively. The threats here are heightened by the high mortality rates for HAV, and its endemicity in South Africa. Therefore, we conclude that the Buffalo River and its source water dams are a public health hazard. The QMRA presented here is the first of its kinds in the Eastern Cape Province and provides the building block for a quantitatively oriented local guideline for water quality management in the Province.


Assuntos
Adenovírus Humanos/isolamento & purificação , Enterovirus/isolamento & purificação , Vírus da Hepatite A/isolamento & purificação , Rios/virologia , Rotavirus/isolamento & purificação , Infecções por Adenovirus Humanos/epidemiologia , Infecções por Adenovirus Humanos/virologia , Adenovírus Humanos/genética , Adenovírus Humanos/fisiologia , Enterovirus/genética , Enterovirus/fisiologia , Infecções por Enterovirus/epidemiologia , Infecções por Enterovirus/virologia , Hepatite A/epidemiologia , Hepatite A/virologia , Vírus da Hepatite A/genética , Vírus da Hepatite A/fisiologia , Humanos , Saúde Pública , Rotavirus/genética , Rotavirus/fisiologia , Infecções por Rotavirus/epidemiologia , Infecções por Rotavirus/virologia , África do Sul/epidemiologia , Recursos Hídricos/análise
17.
Virol J ; 10: 184, 2013 Jun 07.
Artigo em Inglês | MEDLINE | ID: mdl-23758993

RESUMO

Compared to traditional testing strategies, nucleic acid amplification tests such as real-time PCR offer many advantages for the detection of human adenoviruses. However, commercial assays are expensive and cost prohibitive for many clinical laboratories. To overcome fiscal challenges, a cost effective strategy was developed using a combination of homogenization and heat treatment with an "in-house" real-time PCR. In 196 swabs submitted for adenovirus detection, this crude extraction method showed performance characteristics equivalent to viral DNA obtained from a commercial nucleic acid extraction. In addition, the in-house real-time PCR outperformed traditional testing strategies using virus culture, with sensitivities of 100% and 69.2%, respectively. Overall, the combination of homogenization and heat treatment with a sensitive in-house real-time PCR provides accurate results at a cost comparable to viral culture.


Assuntos
Infecções por Adenoviridae/diagnóstico , Adenovírus Humanos/isolamento & purificação , Técnicas de Diagnóstico Molecular/métodos , Reação em Cadeia da Polimerase em Tempo Real/métodos , Manejo de Espécimes/métodos , Virologia/métodos , Adenovírus Humanos/genética , Humanos , Técnicas de Diagnóstico Molecular/economia , Reação em Cadeia da Polimerase em Tempo Real/economia , Sensibilidade e Especificidade , Manejo de Espécimes/economia , Virologia/economia
18.
J Appl Microbiol ; 115(1): 310-8, 2013 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-23617931

RESUMO

AIMS: To assess human adenoviruses (HAdVs) removal in an advanced wastewater treatment facility and compare two parallel tertiary treatment methods for the removal of HAdVs. METHODS AND RESULTS: Tangential flow ultrafiltration was used to concentrate the water samples, and HAdVs were precipitated by polyethylene glycol. HAdVs were detected only by TaqMan real-time PCR, and HAdV genotype was determined by DNA sequence. HAdVs were detected in 100% of primary clarification influent, secondary clarification effluent and granular media (GM) filtration effluent samples but only in 31·2% of membrane filtration (MF) effluent and 41·7% of final effluent (FE) samples, respectively. The average HAdVs loads were significantly reduced along the treatments but HAdVs were still present in FE. Comparison of two parallel treatments (GM vs MF) showed that MF was technically superior to GM for the removal of HAdVs. CONCLUSIONS: These findings indicate that adenoviruses are not completely removed by treatment processes. MF is a better treatment for removal of adenoviruses than GM filtration. Because only qPCR was used, the results only indicate the removal of adenovirus DNA and not the infectivity of viruses. SIGNIFICANCE AND IMPACT OF THE STUDY: Presence of HAdVs in FE by qPCR suggests a potential public health risk from exposure to the treated wastewater and using the FE for recreational or water reuse purposes should be cautious.


Assuntos
Adenovírus Humanos/isolamento & purificação , Reação em Cadeia da Polimerase em Tempo Real , Eliminação de Resíduos Líquidos/métodos , Águas Residuárias/virologia , Adenovírus Humanos/genética , Filtração , Georgia
19.
Cancer Gene Ther ; 18(10): 724-33, 2011 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-21836631

RESUMO

Although previous studies modified two components of conditionally replicating adenoviruses (CRAs), which selectively replicate in and kill cancer cells, the most accurate ways to achieve increased cancer specificity (that is, safety) without reducing the anticancer (that is, therapeutic) effects are unknown. Here, we generated two types of survivin-responsive m-CRAs (Surv.m-CRAs), Surv.m-CRA-CMVp and Surv.m-CRA-OCp, which use two and three different mechanisms to target cancer, that is, early region 1A (E1A) regulated by the survivin promoter and mutated E1BΔ55K regulated by the ubiquitously active cytomegalovirus promoter and cancer/tissue-specific osteocalcin promoter, respectively, and carefully examined their safety and anticancer effects. Endogenous osteocalcin mRNA was expressed and further enhanced by vitamin D(3) in all osteosarcoma and prostate cancer cell lines and human osteoblasts, but not in human fibroblasts. The osteocalcin promoter activity was weak even with vitamin D(3) treatment in these osteocalcin-expressing cancers, leading to low E1BΔ55K expression after Surv.m-CRA-OCp infection. Nevertheless, Surv.m-CRA-OCp had significantly increased cancer specificity without reduced anticancer effects in both in vitro and in vivo experiments. The unexpected but favorable fact that strong activity of an altered E1B promoter is unnecessary indicates that the majority of cancer/tissue-specific promoters may be used to generate ideal m-CRAs and will advance the development of m-CRA-based cancer therapies.


Assuntos
Proteínas E1B de Adenovirus/genética , Adenovírus Humanos/genética , Vetores Genéticos/genética , Regiões Promotoras Genéticas , Replicação Viral , Proteínas E1B de Adenovirus/metabolismo , Adenovírus Humanos/metabolismo , Animais , Linhagem Celular Tumoral , Efeito Citopatogênico Viral , Ordem dos Genes , Vetores Genéticos/metabolismo , Humanos , Proteínas Inibidoras de Apoptose/genética , Proteínas Inibidoras de Apoptose/metabolismo , Camundongos , Neoplasias/genética , Neoplasias/metabolismo , Osteocalcina/genética , Osteocalcina/metabolismo , RNA Mensageiro , Survivina , Transdução Genética , Carga Tumoral/genética , Ensaios Antitumorais Modelo de Xenoenxerto
20.
Water Res ; 44(5): 1520-30, 2010 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-19944439

RESUMO

Human adenoviruses (HAdVs) in wastewater samples taken from four different treatment stages of a full-scale municipal wastewater treatment plant (i.e., incoming raw sewage, primary sedimentation effluent, membrane bioreactor (MBR) influent, and MBR effluent) were quantified by real-time PCR assays to further estimate removal efficiency of the HAdVs. Based on hexon gene sequence comparisons, HAdV species A, C, and F were consistently found in the wastewater samples. In general, all three identified HAdV species were detected in most of the wastewater samples using the real-time PCR assays. Overall HAdV concentrations were rather stable over the entire 8-month study period (January-August, 2008) (approximately 10(6)-10(7)viral particles/L of wastewater for the raw sewage and primary effluent; 10(8)-10(9)viral particles/L for the MBR influent; and, 10(3)-10(4)viral particles/L for the MBR effluent). No significant seasonal differences were noticed for the HAdV abundances. Removal efficiencies of the viral particles in the full-scale MBR process were assessed and showed an average HAdV removal of 5.0+/-0.6logs over the study period. The removal efficiencies for F species (average log removal of 6.5+/-1.3logs) were typically higher (p-value <0.05) than those of the other two species (average of 4.1+/-0.9 and 4.6+/-0.5logs for species A and C, respectively). These results demonstrate that the full-scale MBR system efficiently removed most HAdV from the wastewater leaving about 10(3)viral particles/L in the MBR effluent.


Assuntos
Adenovírus Humanos/isolamento & purificação , Reatores Biológicos/virologia , Cidades , Membranas Artificiais , Eliminação de Resíduos Líquidos/instrumentação , Purificação da Água/instrumentação , Adenovírus Humanos/genética , Humanos , Filogenia , Esgotos/virologia
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