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1.
Dig Dis Sci ; 67(2): 613-621, 2022 02.
Artigo em Inglês | MEDLINE | ID: mdl-33761089

RESUMO

BACKGROUND: Colonoscopic screening and surveillance for colorectal cancer could be made safer and more efficient if endoscopists could predict histology without the need to biopsy and perform histopathology on every polyp. Elastic-scattering spectroscopy (ESS), using fiberoptic probes integrated into standard biopsy tools, can assess, both in vivo and in real time, the scattering and absorption properties of tissue related to its underlying pathology. AIMS: The objective of this study was to evaluate prospectively the potential of ESS to predict polyp pathology accurately. METHODS: We obtained ESS measurements from patients undergoing screening/surveillance colonoscopy using an ESS fiberoptic probe integrated into biopsy forceps. The integrated forceps were used for tissue acquisition, following current standards of care, and optical measurement. All measurements were correlated to the index pathology. A machine learning model was then applied to measurements from 367 polyps in 169 patients to prospectively evaluate its predictive performance. RESULTS: The model achieved sensitivity of 0.92, specificity of 0.87, negative predictive value (NPV) of 0.87, and high-confidence rate (HCR) of 0.84 for distinguishing 220 neoplastic polyps from 147 non-neoplastic polyps of all sizes. Among 138 neoplastic and 131 non-neoplastic polyps ≤ 5 mm, the model achieved sensitivity of 0.91, specificity of 0.88, NPV of 0.89, and HCR of 0.83. CONCLUSIONS: Results show that ESS is a viable endoscopic platform for real-time polyp histology, particularly for polyps ≤ 5 mm. ESS is a simple, low-cost, clinically friendly, optical biopsy modality that, when interfaced with minimally obtrusive endoscopic tools, offers an attractive platform for in situ polyp assessment.


Assuntos
Adenocarcinoma/diagnóstico , Pólipos Adenomatosos/diagnóstico , Pólipos do Colo/diagnóstico , Colonoscopia/métodos , Neoplasias Colorretais/diagnóstico , Diagnóstico por Computador/métodos , Análise Espectral/métodos , Adenocarcinoma/patologia , Pólipos Adenomatosos/patologia , Inteligência Artificial , Pólipos do Colo/patologia , Neoplasias Colorretais/patologia , Humanos , Sensibilidade e Especificidade , Análise Espectral/instrumentação
2.
Chem Commun (Camb) ; 57(58): 7156-7159, 2021 Jul 20.
Artigo em Inglês | MEDLINE | ID: mdl-34184021

RESUMO

A low-cost and multi-channel smartphone-based spectrometer was developed for LIBS. As the CMOS detector is two-dimensional, simultaneous multichannel detection was achieved by coupling a linear array of fibres for light collection. Thus, besides the atomic information, the spectral images containing the propagation and spatial distribution characters of a laser induced plasma plume could be recorded. With these additional features, accurate rock type prediction was achieved by processing the raw data directly through a deep learning model.


Assuntos
Aprendizado Profundo , Smartphone , Algoritmos , Desenho de Equipamento , Processamento de Imagem Assistida por Computador , Análise Espectral/instrumentação
3.
J Sci Food Agric ; 101(10): 4308-4314, 2021 Aug 15.
Artigo em Inglês | MEDLINE | ID: mdl-33417254

RESUMO

BACKGROUND: Non-destructive determination of the internal quality of fruit with a thick rind and of a large size is always difficult and challenging. To investigate the feasibility of the dielectric spectroscopy technique with respect to determining the sugar content of melons during the postharvest stage, three cultivars of melon samples (160 melons for each cultivar) were used to acquire dielectric spectra over the frequency range 20-4500 MHz. The three cultivars of melons were divided separately into a calibration set and a prediction set in a ratio of 3:1 by a joint x-y distance algorithm. Partial least squares (PLS) and extreme learning machine (ELM) methods were applied to develop individual-cultivar and multi-cultivar models based on full frequencies (FFs) and effective dielectric frequencies (EDFs) selected by the successive projection algorithm (SPA). RESULTS: The results showed that ELM models demonstrated a better performance than PLS models for the same input dielectric variables. Most of the models built based on the EDFs selected by SPA had a slightly worse performance compared to those based on FFs. For both PLS and ELM methods, the models for multi-cultivars demonstrated a worse calibration and prediction performance compared to those for individual cultivars. When individual-cultivar and multi-cultivar samples were used to build sugar content determination models, the best model was FFs-ELM (Rp  = 0.887, RMSEP = 0.986), FFs-ELM (Rp  = 0.870, RMSEP = 1.028), FFs-PLS (Rp  = 0.882, RMSEP = 1.010) and FFs-ELM (Rp  = 0.849, RMSEP = 1.085) for 'Hongyanliang', 'Xinzaomi', 'Manao' and multi-cultivar melons, respectively. CONCLUSION: The present study indicates that it is possible to develop both individual-cultivar and multi-cultivar models for determining the sugar content of melons based on the dielectric spectroscopy technique. © 2021 Society of Chemical Industry.


Assuntos
Cucurbitaceae/química , Análise de Alimentos/métodos , Análise Espectral/métodos , Açúcares/análise , Algoritmos , Cucurbitaceae/classificação , Análise de Alimentos/instrumentação , Frutas/química , Frutas/classificação , Aprendizado de Máquina , Controle de Qualidade , Análise Espectral/instrumentação
4.
Health Phys ; 120(2): 171-176, 2021 02 01.
Artigo em Inglês | MEDLINE | ID: mdl-32701612

RESUMO

ABSTRACT: Aiming at portability and mobility, the design and implementation of a portable neutron spectrometer, namely the Matryoshka-type Neutron Spectrometer, was completed while considering the idea of a Bonner Sphere Spectrometer. The Matryoshka-type Neutron Spectrometer used a spherical 3He proportional counter as a thermal neutron detector. A number of cylindrical acrylic cups with diameters from 4 cm to 40 cm were made as containers for water as a moderator. The Monte Carlo method was adopted in order to obtain the energy response matrix of the Matryoshka-type Neutron Spectrometer. During the measurement, each acrylic cup contained water as a moderator, and the 3He proportional counter was set to the geometric center to perform neutron counting. With the energy response matrix obtained above, the neutron spectrum was resolved by a classical inversion algorithm. After the measurement, water was drained and the acrylic cups were placed one inside the other, like a Matryoshka doll. The design of a Matryoshka-type Neutron Spectrometer has reduced the mass and volume of the Bonner Sphere Spectrometer and was not difficult to carry around. Comparison tests acquiring background and Am-Be source neutron spectra between the Matryoshka-type Neutron Spectrometer and Bonner Sphere Spectrometer proved the effectiveness of the Matryoshka-type Neutron Spectrometer.


Assuntos
Desenho de Equipamento , Nêutrons , Análise Espectral/instrumentação , Método de Monte Carlo , Doses de Radiação
5.
BMC Nephrol ; 21(1): 229, 2020 06 15.
Artigo em Inglês | MEDLINE | ID: mdl-32539773

RESUMO

BACKGROUND: Proteinuria is a major marker of chronic kidney disease (CKD) progression and the predictor of cardiovascular mortality. The rapid development of renal failure is expected in those patients who have higher level of proteinuria however, some patients may have slow decline of renal function despite lower level of urinary protein excretion. The different mechanical (visco-elastic) and chemical properties, as well as the proteome profiles of urinary proteins might explain their tubular toxicity mechanism. Brillouin light scattering (BLS) and surface enhanced Raman scattering (SERS) spectroscopies are non-contact, laser optical-based techniques providing visco-elastic and chemical property information of probed human biofluids. We proposed to study and compare these properties of urinary proteins using BLS and SERS spectroscopies in nephrotic patient and validate hybrid BLS-SERS spectroscopy in diagnostic of urinary proteins as well as their profiling. The project ultimately aims for the development of an optical spectroscopic sensor for rapid, non-contact monitoring of urine samples from patients in clinical settings. METHODS: BLS and SERS spectroscopies will be used for non-contact assessment of urinary proteins in proteinuric patients and healthy subjects and will be cross-validated by Liquid Chromatography-Mass Spectrometry (LC-MS). Participants will be followed-up during the 1 year and all adverse events such as exacerbation of proteinuria, progression of CKD, complications of nephrotic syndrome, disease relapse rate and inefficacy of treatment regimen will be registered referencing incident dates. Associations between urinary protein profiles (obtained from BLS and SERS as well as LC-MS) and adverse outcomes will be evaluated to identify most unfavored protein profiles. DISCUSSION: This prospective study is focused on the development of non-contact hybrid BLS - SERS sensing tool and its clinical deployment for diagnosis and prognosis of proteinuria. We will identify the most important types of urine proteins based on their visco-elasticity, amino-acid profile and molecular weight responsible for the most severe cases of proteinuria and progressive renal function decline. We will aim for the developed hybrid BLS - SERS sensor, as a new diagnostic & prognostic tool, to be transferred to other biomedical applications. TRIAL REGISTRATION: The trial has been approved by ClinicalTrials.gov (Trial registration ID NCT04311684). The date of registration was March 17, 2020.


Assuntos
Biomarcadores/urina , Proteinúria/diagnóstico , Insuficiência Renal Crônica/urina , Análise Espectral/métodos , Adulto , Cromatografia Líquida , Feminino , Humanos , Masculino , Espectrometria de Massas , Pessoa de Meia-Idade , Estudos Prospectivos , Projetos de Pesquisa , Análise Espectral/instrumentação , Análise Espectral Raman
6.
J Biomed Opt ; 25(1): 1-11, 2020 01.
Artigo em Inglês | MEDLINE | ID: mdl-31920047

RESUMO

To detect small-scale changes in tissue with optical techniques, small sampling volumes are required. Single fiber reflectance (SFR) spectroscopy has a sampling depth of a few hundred micrometers. SFR spectroscopy uses a single fiber to emit and collect light. The only available model to determine optical properties with SFR spectroscopy was derived for tissues with modified Henyey-Greenstein phase functions. Previously, we demonstrated that this model is inadequate for other tissue phase functions. We develop a model to relate SFR measurements to scattering properties for a range of phase functions, in the absence of absorption. Since the source and detector overlap, the reflectance cannot be accurately described by diffusion theory alone: SFR measurements are subdiffuse. Therefore, we describe the reflectance as a combination of a diffuse and a semiballistic component. We use the model of Farrell et al. for the diffuse component, solved for an overlapping source and detector fiber. For the semiballistic component, we derive a new parameter, psb, which incorporates the integrals of the phase function over 1 deg in the backward direction and 23 deg in the forward direction. Our model predicts the reflectance with a median error of 2.1%, compared to 9.0% for the currently available model.


Assuntos
Tecnologia de Fibra Óptica/instrumentação , Espalhamento de Radiação , Análise Espectral/instrumentação , Simulação por Computador , Desenho Assistido por Computador , Luz , Método de Monte Carlo
7.
Anal Chim Acta ; 1093: 150-159, 2020 Jan 06.
Artigo em Inglês | MEDLINE | ID: mdl-31735208

RESUMO

As a powerful tool for medical diagnosis and bioanalysis, conventional optical spectrometers are generally expensive, bulky and always require an accompanying data processing device. In this work, we developed a novel smartphone-based CD-spectrometer (SCDS) for high sensitive and ultra-portable colorimetric analysis, with the advantage of cost-effective and simplicity. The distance between the light source and slit, the structure of SCDS and the parameters of camera in the smartphone were all optimized to ensure the best analytical performance. Besides, the SCDS employed HSV color model and utilized the overall intensity calculated by summing V-value of adjacent position for the absorbance measurement. In this way the errors caused by the low resolution of CD-grating can effectively be eliminated to promote the sensitivity of the SCDS. The performance of the SCDS was first validated for colorimetric detection of BSA with a detection limit of 0.0073 mg/mL, which is superior compared to that of the microtiter plate reader (MTPR). Moreover, by combining with 3,3',5,5'-tetramethylbenzidine-manganese dioxide (TMB-MnO2) nanosheets reaction, a high sensitive and specific system for ascorbic acid detection was established. The SCDS gives a detection range from 0.6250 µM to 40 µM with a detection limit of 0.4946 µM for AA detection. Compared to other studies, the SCDS features wide detection range and very low detection limit with low cost instrument. Therefore, the SCDS will be an ideal and promising colorimetric system for point-of-care (POC) application in food security, disease diagnosis and environmental monitoring.


Assuntos
Ácido Ascórbico/análise , Colorimetria/métodos , Discos Compactos , Smartphone , Análise Espectral/métodos , Animais , Benzidinas/química , Bebidas/análise , Bovinos , Colorimetria/instrumentação , Desenho de Equipamento , Limite de Detecção , Compostos de Manganês/química , Nanoestruturas/química , Óxidos/química , Testes Imediatos , Soroalbumina Bovina/análise , Análise Espectral/instrumentação
8.
J Biomed Opt ; 24(9): 1-8, 2019 09.
Artigo em Inglês | MEDLINE | ID: mdl-31512441

RESUMO

The PeriFlux 6000 EPOS system combines diffuse reflectance spectroscopy (DRS) and laser Doppler flowmetry (LDF) for the assessment of oxygen saturation (expressed in percentage), red blood cell (RBC) tissue fraction (expressed as volume fraction, %RBC), and perfusion (%RBC × mm / s) in the microcirculation. It also allows the possibility of separating the perfusion into three speed regions (0 to 1, 1 to 10, and >10 mm / s). We evaluate the speed-resolved perfusion components, i.e., the relative amount of perfusion within each speed region, using a blood-flow phantom. Human blood was pumped through microtubes with an inner diameter of 0.15 mm. Measured DRS and LDF spectra were compared to Monte Carlo-simulated spectra in an optimization routine, giving the best-fit parameters describing the measured spectra. The root-mean-square error for each of the three speed components (0 to 1, 1 to 10, and >10 mm / s, respectively) when describing the blood-flow speed in the microtubes was 2.9%, 8.1%, and 7.7%. The presented results show that the system can accurately discriminate blood perfusion originating from different blood-flow speeds, which may enable improved measurement of healthy and dysfunctional microcirculatory flow.


Assuntos
Fluxometria por Laser-Doppler/instrumentação , Dispositivos Ópticos , Imagens de Fantasmas , Algoritmos , Velocidade do Fluxo Sanguíneo , Simulação por Computador , Hemodinâmica , Humanos , Fluxometria por Laser-Doppler/estatística & dados numéricos , Microcirculação , Método de Monte Carlo , Dispositivos Ópticos/estatística & dados numéricos , Fenômenos Ópticos , Oxigênio/sangue , Pele/irrigação sanguínea , Análise Espectral/instrumentação , Análise Espectral/estatística & dados numéricos
9.
Sci Rep ; 9(1): 10799, 2019 07 25.
Artigo em Inglês | MEDLINE | ID: mdl-31346217

RESUMO

Hyperspectral imaging is a widely used technology for industrial and scientific purposes, but the high cost and large size of commercial setups have made them impractical for most basic research. Here, we designed and implemented a fully open source and low-cost hyperspectral scanner based on a commercial spectrometer coupled to custom optical, mechanical and electronic components. We demonstrate our scanner's utility for natural imaging in both terrestrial and underwater environments. Our design provides sub-nm spectral resolution between 350-950 nm, including the UV part of the light spectrum which has been mostly absent from commercial solutions and previous natural imaging studies. By comparing the full light spectra from natural scenes to the spectral sensitivity of animals, we show how our system can be used to identify subtle variations in chromatic details detectable by different species. In addition, we have created an open access database for hyperspectral datasets collected from natural scenes in the UK and India. Together with comprehensive online build- and use-instructions, our setup provides an inexpensive and customisable solution to gather and share hyperspectral imaging data.


Assuntos
Visão de Cores , Análise Espectral/instrumentação , Animais , Humanos , Análise Espectral/economia , Luz Solar , Raios Ultravioleta
10.
J Food Prot ; 82(8): 1314-1319, 2019 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-31310170

RESUMO

Bacterial biofilms constitute a major source of sanitary problems and economic losses in the food industry. Indeed, biofilm removal may require intense mechanical cleaning procedures or very high concentrations of disinfectants or both, which can be damaging to the environment and human health. This study assessed the efficacy of a technique based on spectroscopy in the visible, near-infrared, and short-wavelength infrared range for the quick detection of biofilms formed on polystyrene by the pathogenic bacterium Staphylococcus aureus. To do that, biofilms corresponding to three S. aureus strains, which differed in biofilm-forming ability and composition of the extracellular matrix, were allowed to develop for 5 or 24 h, representing an active formation stage and mature biofilms, respectively. Spectral analysis of the samples, corresponding to three biological replicates of each condition, was then performed by using a portable device. The results of these experiments showed that partial least-squares discriminant analysis of the spectral profile could discriminate between surfaces containing attached bacterial biomass and noninoculated ones. In this model, the two first principal components accounted for 39 and 19% of the variance and the estimated error rate stabilized after four components. Cross-validation accuracy of this assessment was 100%. This work lays the foundation for subsequent development of a spectroscopy-based protocol that allows biofilm detection on food industrial surfaces.


Assuntos
Biofilmes , Indústria de Processamento de Alimentos , Análise Espectral , Staphylococcus aureus , Indústria de Processamento de Alimentos/instrumentação , Indústria de Processamento de Alimentos/métodos , Humanos , Raios Infravermelhos , Luz , Análise Espectral/instrumentação , Análise Espectral/normas , Infecções Estafilocócicas/prevenção & controle , Staphylococcus aureus/química , Staphylococcus aureus/isolamento & purificação
11.
Biosens Bioelectron ; 142: 111508, 2019 Oct 01.
Artigo em Inglês | MEDLINE | ID: mdl-31325675

RESUMO

Incorporation of new readout methods with established analytical devices allows methodological innovations in analytical sciences. Herein, we present a new sensing platform by combining an ultrasensitive element analyzer, namely the laser-induced breakdown spectroscopy (LIBS) and a lateral flow strip (LFS). AgxAuy bimetallic nanoparticles (AgxAuyBNPs) are selected as the labels to deliver the optimal quantitative performance by analyzing the Ag (I) signal from the test (T) line of LFS. For prototypical application in pathogen detection, the LIBS-LFS sensor can achieve a detection limit of 1.6 cfu mL-1 of Staphylococcus aureus (S. aureus) within 10 min, which is superior to conventional methods. Importantly, the signals of AgxAuyBNPs for visual and LIBS analysis are stable and still readable after the detection is finished and the test strip is stored for up to 13 days, suggesting a potential for long-term data preservation. This combination of LIBS with LFS provides a new concept toward integrated nano/analytical devices that can benefit various application scenarios.


Assuntos
Técnicas Biossensoriais/instrumentação , Nanopartículas Metálicas/química , Fitas Reagentes/análise , Infecções Estafilocócicas/microbiologia , Staphylococcus aureus/isolamento & purificação , Animais , Técnicas Biossensoriais/economia , Água Potável/microbiologia , Desenho de Equipamento , Análise de Alimentos/economia , Análise de Alimentos/instrumentação , Microbiologia de Alimentos , Ouro/química , Humanos , Lasers , Limite de Detecção , Leite/microbiologia , Fitas Reagentes/economia , Prata/química , Análise Espectral/economia , Análise Espectral/instrumentação , Infecções Estafilocócicas/diagnóstico
12.
Meat Sci ; 152: 73-80, 2019 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-30831540

RESUMO

It has been demonstrated that optical spectroscopy is a powerful tool for the quantitative monitoring of the main chemical components in food. However, portable spectrometer for on-site food quality assessment has rarely been reported. Here, a low-cost and portable hyperspectral scanner is developed. Utilizing this hyperspectral scanner by handheld push-broom scanning, reflectance spectra of meat samples can be obtained non-invasively and rapidly. Support vector regression (SVR) model is used to predict the pH value. The prediction accuracy rate of the model is close to 90%, and the coefficient of determination is about 0.93, which shows the feasibility of this system in on-site monitoring pH of meat.


Assuntos
Qualidade dos Alimentos , Carne Vermelha/análise , Análise Espectral/instrumentação , Animais , Concentração de Íons de Hidrogênio , Análise Espectral/métodos , Suínos
13.
Braz. arch. biol. technol ; 62: e19180442, 2019. tab, graf
Artigo em Inglês | LILACS | ID: biblio-1055411

RESUMO

Abstract The purpose of the study was to develop a xenogenic bubaline diaphragm matrix (BDM) for abdominal hernia repair. A fresh diaphragm was decellularized using aqueous sodium dodecyl sulfate (SDS) solutions (0.5-4% w/v) over a period. Acellularity was confirmed histologically and characterized by Masson's trichrome staining, scanning electron microscopy (SEM), DNA quantification, agarose gel electrophoresis, and Fourier-transform infrared spectroscopy. The BDM was used for clinical abdominal hernia repair in six cattle. Clinical, hemato-biochemical and antioxidant parameters were evaluated to assess biocompatibility of xenogenic BDM. Histologically, the diaphragm treated with 2% SDS for 48 h showed complete acellularity and orderly arranged collagen fibers. The SEM confirmed preservation of collagen structure and integrity. The DNA content was significantly (P < 0.05) reduced in BDM (33.12 ± 5.40 ng/mg) as compared to the native diaphragm (443.96 ± 162.60 ng/mg). DNA extracts from BDM show considerable removal of DNA material, with absence of DNA band in agarose gel. The FTIR spectrum of BDM has shown all characteristic transmittance peaks of bovine skin collagen indicating preserved collagen structure. Six cattle with BDM implant recovered uneventfully and remained sound at least upto 6 months. Hemato-biochemical and antioxidant findings were unremarkable. Bubaline diaphragm matrix shows excellent repair efficiency and biocompatibility for abdominal hernia repair in cattle without complications.


Assuntos
Búfalos , Diafragma/anormalidades , Hérnia Abdominal/fisiopatologia , Análise Espectral/instrumentação , Teste de Materiais/métodos , Microscopia Eletrônica de Varredura/instrumentação
14.
J Biomed Opt ; 24(7): 1-11, 2018 11.
Artigo em Inglês | MEDLINE | ID: mdl-30456934

RESUMO

We present a method to recover absorption and reduced scattering spectra for each layer of a two-layer turbid media from spatial frequency-domain spectroscopy data. We focus on systems in which the thickness of the top layer is less than the transport mean free path ( 0.1 - 0.8l * ) . We utilize an analytic forward solver, based upon the N'th-order spherical harmonic expansion with Fourier decomposition ( SHEFN ) method in conjunction with a multistage inverse solver. We test our method with data obtained using spatial frequency-domain spectroscopy with 32 evenly spaced wavelengths within λ = 450 to 1000 nm on six-layered tissue phantoms with distinct optical properties. We demonstrate that this approach can recover absorption and reduced scattering coefficient spectra for both layers with accuracy comparable with current Monte Carlo methods but with lower computational cost and potential flexibility to easily handle variations in parameters such as the scattering phase function or material refractive index. To our knowledge, this approach utilizes the most accurate deterministic forward solver used in such problems and can successfully recover properties from a two-layer media with superficial layer thicknesses.


Assuntos
Imagem Óptica/métodos , Processamento de Sinais Assistido por Computador , Análise Espectral/métodos , Desenho de Equipamento , Modelos Biológicos , Método de Monte Carlo , Imagem Óptica/instrumentação , Imagens de Fantasmas , Refratometria , Análise Espectral/instrumentação
15.
J Biomed Opt ; 23(9): 1-11, 2018 09.
Artigo em Inglês | MEDLINE | ID: mdl-30264554

RESUMO

Biomechanical properties of mammalian bones, such as strength, toughness, and plasticity, are essential for understanding how microscopic-scale mechanical features can link to macroscale bones' strength and fracture resistance. We employ Brillouin light scattering (BLS) microspectroscopy for local assessment of elastic properties of bones under compression and the efficacy of the tissue engineering approach based on heparin-conjugated fibrin (HCF) hydrogels, bone morphogenic proteins, and osteogenic stem cells in the regeneration of the bone tissues. BLS is noninvasive and label-free modality for probing viscoelastic properties of tissues that can give information on structure-function properties of normal and pathological tissues. Results showed that MCS and BPMs are critically important for regeneration of elastic and viscous properties, respectively, HCF gels containing combination of all factors had the best effect with complete defect regeneration at week nine after the implantation of bone grafts and that the bones with fully consolidated fractures have higher values of elastic moduli compared with defective bones.


Assuntos
Osso e Ossos , Elasticidade/fisiologia , Espalhamento de Radiação , Análise Espectral/métodos , Animais , Regeneração Óssea/fisiologia , Osso e Ossos/química , Osso e Ossos/citologia , Osso e Ossos/diagnóstico por imagem , Células Cultivadas , Desenho de Equipamento , Luz , Células-Tronco Mesenquimais/citologia , Microscopia Confocal , Coelhos , Radiografia , Análise Espectral/instrumentação , Engenharia Tecidual
16.
J Biomed Opt ; 23(9): 1-11, 2018 09.
Artigo em Inglês | MEDLINE | ID: mdl-30251484

RESUMO

Development of low-cost and portable optical coherence tomography (OCT) systems is of global interest in the OCT research community. Such systems enable utility broadly throughout a clinical facility, or in remote areas that often lack clinical infrastructure. We report the development and validation of a low-cost, portable briefcase spectral-domain optical coherence tomography (SD-OCT) system for point-of-care diagnostics in primary care centers and/or in remote settings. The self-contained briefcase OCT contains all associated optical hardware, including light source, spectrometer, hand-held probe, and a laptop. Additionally, this system utilizes unique real-time mosaicking of surface video images that are synchronized with rapid A-scan acquisition to eliminate the need for lateral scanning hardware, and enable the construction of cross-sectional B-mode images over extended lateral distances. The entire briefcase system weighs 9 kg and costs ∼USD$8000 using off-the-shelf components. System performance was validated by acquiring images of in vivo human skin on the fingertip, palm, and nail fold. The efficiency, portability, and low-cost enable accessibility and utility in primary care centers and low-resource settings.


Assuntos
Sistemas Automatizados de Assistência Junto ao Leito , Atenção Primária à Saúde , Tomografia de Coerência Óptica/instrumentação , Desenho de Equipamento , Mãos/diagnóstico por imagem , Humanos , Pele/diagnóstico por imagem , Análise Espectral/instrumentação
17.
J Biomed Opt ; 23(4): 1-12, 2018 04.
Artigo em Inglês | MEDLINE | ID: mdl-29633609

RESUMO

With recent proliferation in compact and/or low-cost clinical multispectral imaging approaches and commercially available components, questions remain whether they adequately capture the requisite spectral content of their applications. We present a method to emulate the spectral range and resolution of a variety of multispectral imagers, based on in-vivo data acquired from spatial frequency domain spectroscopy (SFDS). This approach simulates spectral responses over 400 to 1100 nm. Comparing emulated data with full SFDS spectra of in-vivo tissue affords the opportunity to evaluate whether the sparse spectral content of these imagers can (1) account for all sources of optical contrast present (completeness) and (2) robustly separate and quantify sources of optical contrast (crosstalk). We validate the approach over a range of tissue-simulating phantoms, comparing the SFDS-based emulated spectra against measurements from an independently characterized multispectral imager. Emulated results match the imager across all phantoms (<3 % absorption, <1 % reduced scattering). In-vivo test cases (burn wounds and photoaging) illustrate how SFDS can be used to evaluate different multispectral imagers. This approach provides an in-vivo measurement method to evaluate the performance of multispectral imagers specific to their targeted clinical applications and can assist in the design and optimization of new spectral imaging devices.


Assuntos
Imagem Óptica/métodos , Análise Espectral/métodos , Adulto , Animais , Queimaduras/diagnóstico por imagem , Carotenoides/análise , Feminino , Hemoglobinas/análise , Humanos , Masculino , Melaninas/análise , Pessoa de Meia-Idade , Imagem Multimodal , Imagem Óptica/instrumentação , Imagens de Fantasmas , Ratos , Pele/diagnóstico por imagem , Envelhecimento da Pele/fisiologia , Análise Espectral/instrumentação , Adulto Jovem
18.
Astrobiology ; 17(10): 984-996, 2017 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-29016195

RESUMO

The search for biomarkers of present or past life is one of the major challenges for in situ planetary exploration. Multiple constraints limit the performance and sensitivity of remote in situ instrumentation. In addition, the structure, chemical, and mineralogical composition of the sample may complicate the analysis and interpretation of the results. The aim of this work is to highlight the main constraints, performance, and complementarity of several techniques that have already been implemented or are planned to be implemented on Mars for detection of organic and molecular biomarkers on a best-case sample scenario. We analyzed a 1000-year-old desiccated and mummified microbial mat from Antarctica by Raman and IR (infrared) spectroscopies (near- and mid-IR), thermogravimetry (TG), differential thermal analysis, mass spectrometry (MS), and immunological detection with a life detector chip. In spite of the high organic content (ca. 20% wt/wt) of the sample, the Raman spectra only showed the characteristic spectral peaks of the remaining beta-carotene biomarker and faint peaks of phyllosilicates over a strong fluorescence background. IR spectra complemented the mineralogical information from Raman spectra and showed the main molecular vibrations of the humic acid functional groups. The TG-MS system showed the release of several volatile compounds attributed to biopolymers. An antibody microarray for detecting cyanobacteria (CYANOCHIP) detected biomarkers from Chroococcales, Nostocales, and Oscillatoriales orders. The results highlight limitations of each technique and suggest the necessity of complementary approaches in the search for biomarkers because some analytical techniques might be impaired by sample composition, presentation, or processing. Key Words: Planetary exploration-Life detection-Microbial mat-Life detector chip-Thermogravimetry-Raman spectroscopy-NIR-DRIFTS. Astrobiology 17, 984-996.


Assuntos
Exobiologia/métodos , Meio Ambiente Extraterreno , Vida , Marte , Métodos Analíticos de Preparação de Amostras/instrumentação , Métodos Analíticos de Preparação de Amostras/métodos , Regiões Antárticas , Biomarcadores/análise , Cianobactérias/química , Cianobactérias/isolamento & purificação , Análise Espectral/instrumentação , Análise Espectral/métodos
19.
J Biomed Opt ; 22(2): 26007, 2017 02 01.
Artigo em Inglês | MEDLINE | ID: mdl-28241273

RESUMO

We have developed a portable, breast margin assessment probe leveraging diffuse optical spectroscopy to quantify the morphological landscape of breast tumor margins during breast conserving surgery. The approach presented here leverages a custom-made 16-channel annular photodiode imaging array (arranged in a 4 × 4 grid), a raster-scanning imaging platform with precision pressure control, and compressive sensing with an optimized set of eight wavelengths in the visible spectral range. A scalable Monte-Carlo-based inverse model is used to generate optical property [ ? s ? ( ? ) and ? a ( ? ) ] measures for each of the 16 simultaneously captured diffuse reflectance spectra. Subpixel sampling (0.75 mm) is achieved through incremental x , y raster scanning of the imaging probe, providing detailed optical parameter maps of breast margins over a 2 × 2 ?? cm 2 area in ? 9 ?? min . The morphological landscape of a tumor margin is characterized using optical surrogates for the fat to fibroglandular content ratio, which has demonstrated diagnostic utility in delineating tissue subtypes in the breast.


Assuntos
Neoplasias da Mama/diagnóstico por imagem , Análise Espectral/instrumentação , Feminino , Humanos , Mastectomia Segmentar/instrumentação , Miniaturização , Método de Monte Carlo
20.
J Biophotonics ; 10(4): 565-576, 2017 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-27273026

RESUMO

Optical Breast Spectroscopy (OBS) has been shown to predict mammographic breast density, a strong breast cancer risk factor. OBS is a low-cost technique applicable at any age. OBS information may be useful for personalizing breast cancer screening programs based on risk to improve consensus on and adherence to screening guidelines. To facilitate the use of OBS in population-wide studies, a research prototype OBS device was modified to make it portable and cheaper and to require less operator interaction. Two major changes were made: (1) the broadband light source was replaced with a laser module with 13 individual wavelengths turned on sequentially, enabling the use of photodiode detectors instead of a spectrometer, and (2) the light sources and detectors were placed in fixed positions within 4 sizes of cup, eliminating the need for placement by the operator. Wavelengths were selected using data from two previous studies. The reduction in spectral content did not significantly reduce the ability to distinguish between different risk groups. Positions for the light sources and detectors were chosen based on Monte Carlo simulations to match the optically interrogated volumes of the original device. Two light sources and six detectors per cup were used in the final design.


Assuntos
Densidade da Mama , Neoplasias da Mama/diagnóstico por imagem , Detecção Precoce de Câncer , Mamografia , Imagem Óptica , Análise Espectral , Adolescente , Adulto , Idoso , Simulação por Computador , Detecção Precoce de Câncer/instrumentação , Desenho de Equipamento , Estudos de Viabilidade , Feminino , Humanos , Lasers , Mamografia/instrumentação , Pessoa de Meia-Idade , Modelos Biológicos , Método de Monte Carlo , Imagem Óptica/instrumentação , Fatores de Risco , Análise Espectral/instrumentação , Adulto Jovem
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