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1.
Biomater Adv ; 134: 112691, 2022 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-35581082

RESUMO

Despite being an indispensable clinical procedure, the transfusion of donor blood has important limitations including a short shelf-life, limited availability and specific storage requirements. Therefore, a lot of effort has been devoted to developing hemoglobin (Hb)-based oxygen carriers (HBOCs) that are able to replace or complement standard blood transfusions, especially in extreme life-threatening situations. Herein, we employed a Hb-loaded poly(lactide-co-glycolide) core which was subsequently coated with nanozymes to protect the encapsulated Hb from oxidation by reactive oxygen species. To render HBOCs with long circulation in the vasculature, which is a crucial requirement to achieve the high oxygen demands of our organism, the carrier was coated with a red blood cell-derived membrane. Three coating methods were explored and evaluated by their ability to repel the deposition of proteins and minimize their uptake by an endothelial cell line. Preservation of the oxygen carrying capacity of the membrane-coated carrier was demonstrated by an oxygen-binding and releasing assay and, the functionality resulting from the entrapped nanozymes, was shown by means of superoxide radical anion and hydrogen peroxide depletion assays. All in all, we have demonstrated the potential of the membrane-coated nanocarriers as novel oxygen carrying systems with both antioxidant and stealth properties.


Assuntos
Substitutos Sanguíneos , Substitutos Sanguíneos/química , Contagem de Eritrócitos , Eritrócitos/metabolismo , Hemoglobinas/química , Oxigênio/química
2.
Methods Mol Biol ; 2253: 21-35, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-33315216

RESUMO

Allostery is a fundamental regulatory mechanism in the majority of biological processes of molecular machines. Allostery is well-known as a dynamic-driven process, and thus, the molecular mechanism of allosteric signal transmission needs to be established. Elastic network models (ENMs) provide efficient methods for investigating the intrinsic dynamics and allosteric communication pathways in proteins. In this chapter, two ENM methods including Gaussian network model (GNM) coupled with Markovian stochastic model, as well as the anisotropic network model (ANM), were introduced to identify allosteric effects in hemoglobins. Techniques on model parameters, scripting and calculation, analysis, and visualization are shown step by step.


Assuntos
Hemoglobinas/química , Hemoglobinas/metabolismo , Proteínas/química , Proteínas/metabolismo , Regulação Alostérica , Sítio Alostérico , Animais , Anisotropia , Humanos , Cadeias de Markov , Modelos Moleculares , Simulação de Dinâmica Molecular , Conformação Proteica , Mapas de Interação de Proteínas , Processos Estocásticos
3.
Biol Pharm Bull ; 43(12): 1815-1822, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-33268699

RESUMO

Blood transport proteins are biogenic molecules with unique and interesting inherent characteristics that make up living organisms. As the utilization of their inherent characteristics can be a groundbreaking strategy to resolve and improve several clinical problems, attempts have been made to develop pharmaceutical and biomedical preparations based on blood transport proteins for the treatment and diagnosis of disorders. Among various blood transport proteins, we focus on the immense potential of hemoglobin and albumin to serve as carriers of biomedical gases (oxygen and carbon monoxide) and anticancer agents (low-molecular compounds and antisense oligodeoxynucleotides), respectively, for the development of innovative drug delivery systems (DDS) to treat intractable disorders and solid cancers. In this review, I introduce the pharmaceutical technology, strategies, and application of DDS carriers that have been designed on the basis of the structure and function of hemoglobin and albumin. In addition, the prospect of using hemoglobin and albumin as materials for DDS carriers is discussed.


Assuntos
Antineoplásicos/administração & dosagem , Proteínas Sanguíneas/administração & dosagem , Portadores de Fármacos/administração & dosagem , Invenções/tendências , Neoplasias/tratamento farmacológico , Tecnologia Farmacêutica/tendências , Albuminas/administração & dosagem , Albuminas/química , Albuminas/metabolismo , Animais , Antineoplásicos/química , Antineoplásicos/metabolismo , Sítios de Ligação/fisiologia , Proteínas Sanguíneas/química , Proteínas Sanguíneas/metabolismo , Portadores de Fármacos/química , Portadores de Fármacos/metabolismo , Sistemas de Liberação de Medicamentos/métodos , Sistemas de Liberação de Medicamentos/tendências , Hemoglobinas/administração & dosagem , Hemoglobinas/química , Hemoglobinas/metabolismo , Humanos , Neoplasias/metabolismo , Estrutura Secundária de Proteína , Tecnologia Farmacêutica/métodos , Resultado do Tratamento
4.
Proc Natl Acad Sci U S A ; 116(50): 25236-25242, 2019 12 10.
Artigo em Inglês | MEDLINE | ID: mdl-31767751

RESUMO

Sickle cell disease (SCD) is caused by a variant hemoglobin molecule that polymerizes inside red blood cells (RBCs) in reduced oxygen tension. Treatment development has been slow for this typically severe disease, but there is current optimism for curative gene transfer strategies to induce expression of fetal hemoglobin or other nonsickling hemoglobin isoforms. All SCD morbidity and mortality arise directly or indirectly from polymer formation in individual RBCs. Identifying patients at highest risk of complications and treatment candidates with the greatest curative potential therefore requires determining the amount of polymer in individual RBCs under controlled oxygen. Here, we report a semiquantitative measurement of hemoglobin polymer in single RBCs as a function of oxygen. The method takes advantage of the reduced oxygen affinity of hemoglobin polymer to infer polymer content for thousands of RBCs from their overall oxygen saturation. The method enables approaches for SCD treatment development and precision medicine.


Assuntos
Anemia Falciforme/metabolismo , Eritrócitos/metabolismo , Hemoglobina Falciforme/metabolismo , Hemoglobinas/metabolismo , Ensaios de Triagem em Larga Escala/métodos , Oxigênio/metabolismo , Eritrócitos/química , Eritrócitos/citologia , Hemoglobina Falciforme/química , Hemoglobinas/química , Humanos , Cinética , Oxigênio/química , Análise de Célula Única
5.
Chemphyschem ; 20(19): 2451-2460, 2019 10 02.
Artigo em Inglês | MEDLINE | ID: mdl-31365183

RESUMO

Computer simulation studies of the molecular basis for ligand migration in proteins allow the description of key events such as the transition between docking sites, displacement of existing ligands and solvent molecules, and open/closure of specific "gates", among others. In heme proteins, ligand migration from the solvent to the active site preludes the binding to the heme iron and triggers different functions. In this work, molecular dynamics simulations, a Markov State Model of migration and empirical kinetic equations are combined to study the migration of O2 and NO in two truncated hemoglobins of Mycobacterium tuberculosis (Mt-TrHbN and Mt-TrHbO). For Mt-TrHbN, we show that the difference in the association constant in the oxy and deoxy states relies mainly in the displacement of water molecules anchored in the distal cavity in the deoxy form. The results here provide a valuable approach to study ligand migration in globins.


Assuntos
Hemoglobinas/química , Cadeias de Markov , Simulação de Dinâmica Molecular , Sítios de Ligação , Cinética , Ligantes , Mycobacterium tuberculosis/química , Óxido Nítrico/química , Oxigênio/química
6.
J Hazard Mater ; 378: 120777, 2019 10 15.
Artigo em Inglês | MEDLINE | ID: mdl-31228707

RESUMO

Concern over the effects of nanomaterials on human health has risen due to the dramatic advances in the development of various technologies based on nanomaterials. Gifu Prefecture and Gifu University are developing technologies for recycling used carbon fiber because the waste disposal process is highly cost and energy intensive. However, generation of carbon fiber dust during the recycling process is a serious issue, especially in the occupational environment. Recycling requires carbonization by partial firing treatment at 500℃ followed by firing treatment at 440℃: these processes produce dust as a by-product. It is important to study the influence of carbon fibers on human health at a molecular level. In this study, three types of carbon fibers - before recycling, after carbonization, and after firing were evaluated for their toxic effects on mice. During the breeding period, no loss in body weight was confirmed. Further, by staining the lung tissue sections, it was found that pulmonary fibrosis did not occur. We found that these carbon fibers might not possess severe toxicity. However, we also found that the toxicity varies according to firing treatment. Furthermore, we found that firing treatment reduces the potential hazard to human health.


Assuntos
Fibra de Carbono/química , Carbono/química , Poeira/análise , Monitoramento Ambiental/métodos , Reciclagem/métodos , Animais , Peso Corporal/efeitos dos fármacos , DNA/efeitos dos fármacos , Poluição Ambiental , Perfilação da Expressão Gênica , Hemoglobinas/química , Inflamação , Pulmão/efeitos dos fármacos , Masculino , Camundongos , Camundongos Endogâmicos C57BL , Exposição Ocupacional/efeitos adversos , Análise de Sequência com Séries de Oligonucleotídeos , Estresse Oxidativo , Tamanho da Partícula , RNA/análise , Eliminação de Resíduos
7.
Nucleic Acids Res ; 47(W1): W331-W337, 2019 07 02.
Artigo em Inglês | MEDLINE | ID: mdl-31114890

RESUMO

Our web server, PIZSA (http://cospi.iiserpune.ac.in/pizsa), assesses the likelihood of protein-protein interactions by assigning a Z Score computed from interface residue contacts. Our score takes into account the optimal number of atoms that mediate the interaction between pairs of residues and whether these contacts emanate from the main chain or side chain. We tested the score on 174 native interactions for which 100 decoys each were constructed using ZDOCK. The native structure scored better than any of the decoys in 146 cases and was able to rank within the 95th percentile in 162 cases. This easily outperforms a competing method, CIPS. We also benchmarked our scoring scheme on 15 targets from the CAPRI dataset and found that our method had results comparable to that of CIPS. Further, our method is able to analyse higher order protein complexes without the need to explicitly identify chains as receptors or ligands. The PIZSA server is easy to use and could be used to score any input three-dimensional structure and provide a residue pair-wise break up of the results. Attractively, our server offers a platform for users to upload their own potentials and could serve as an ideal testing ground for this class of scoring schemes.


Assuntos
Algoritmos , Hemoglobinas/química , Simulação de Acoplamento Molecular/métodos , Proteínas/química , Software , Sequência de Aminoácidos , Benchmarking , Sítios de Ligação , Cristalografia por Raios X , Hemoglobinas/metabolismo , Humanos , Internet , Ligação Proteica , Conformação Proteica em alfa-Hélice , Conformação Proteica em Folha beta , Domínios e Motivos de Interação entre Proteínas , Mapeamento de Interação de Proteínas , Multimerização Proteica , Estrutura Quaternária de Proteína , Proteínas/metabolismo , Homologia Estrutural de Proteína , Termodinâmica
8.
J Biomed Opt ; 24(2): 1-4, 2019 02.
Artigo em Inglês | MEDLINE | ID: mdl-30724041

RESUMO

Burn wounds and wound healing invoke several biological processes that may complicate the interpretation of spectral imaging data. Through analysis of spatial frequency domain spectroscopy data (450 to 1000 nm) obtained from longitudinal investigations using a graded porcine burn wound healing model, we have identified features in the absorption spectrum that appear to suggest the presence of hemoglobin breakdown products, e.g., methemoglobin. Our results show that the calculated concentrations of methemoglobin directly correlate with burn severity, 24 h after the injury. In addition, tissue parameters such as oxygenation (StO2) and water fraction may be underestimated by 20% and 78%, respectively, if methemoglobin is not included in the spectral analysis.


Assuntos
Queimaduras/diagnóstico por imagem , Hemoglobinas/química , Espectrofotometria/métodos , Algoritmos , Animais , Queimaduras/sangue , Modelos Animais de Doenças , Hemoglobinas/análise , Análise dos Mínimos Quadrados , Melaninas/química , Metemoglobina/química , Método de Monte Carlo , Imagem Óptica/métodos , Oxigênio/química , Oxiemoglobinas/química , Pele/metabolismo , Suínos , Água/química , Cicatrização
9.
J Neural Eng ; 15(6): 066013, 2018 12.
Artigo em Inglês | MEDLINE | ID: mdl-30207540

RESUMO

OBJECTIVE: Assessing an infant's brain development remains a challenge for neuroscientists and pediatricians despite great technological advances. As a non-invasive neuroimaging tool, functional near-infrared spectroscopy (fNIRS) has great advantages in monitoring an infant's brain activity. To explore the dynamic features of hemodynamic changes in infants, in-pattern exponent (IPE), anti-pattern exponent (APE), as well as permutation cross-mutual information (PCMI) based on symbolic dynamics are proposed to measure the phase differences and coupling strength in oxyhemoglobin (HbO) and deoxyhemoglobin (Hb) signals from fNIRS. APPROACH: First, simulated sinusoidal oscillation signals and four coupled nonlinear systems were employed for performance assessments. Hilbert transform based measurements of hemoglobin phase oxygenation and deoxygenation (hPod) and phase-locking index of hPod (hPodL) were calculated for comparison. Then, the IPE, APE and PCMI indices from resting state fNIRS data of preterm, term infants and adults were calculated to estimate the phase difference and coupling of HbO and Hb. All indices' performance was assessed by the degree of monotonicity (DoM). The box plots and coefficients of variation (CV) were employed to assess the measurements and robustness in the results. MAIN RESULTS: In the simulation analysis, IPE and APE can distinguish the phase difference of two sinusoidal oscillation signals. Both hPodL and PCMI can track the strength of two coupled nonlinear systems. Compared to hPodL, the PCMI had higher DoM indices in measuring the coupling of two nonlinear systems. In the fNIRS data analysis, similar to hPod, the IPE and APE can distinguish preterm, term infants, and adults in 0.01-0.05 Hz, 0.05-0.1 Hz, and 0.01-0.1 Hz frequency bands, respectively. PCMI more effectively distinguished the term and preterm infants than hPodL in the 0.05-0.1 Hz frequency band. As symbolic time series measures, the IPE and APE were able to detect the brain developmental changes in subjects of different ages. PCMI can assess the resting-state HbO and Hb coupling changes across different developmental ages, which may reflect the metabolic and neurovascular development. SIGNIFICANCE: The symbolic-based methodologies are promising measures for fNIRS in estimating the brain development, especially in assessing newborns' brain developmental status.


Assuntos
Encéfalo/diagnóstico por imagem , Encéfalo/crescimento & desenvolvimento , Neuroimagem/métodos , Espectroscopia de Luz Próxima ao Infravermelho/métodos , Adulto , Envelhecimento/fisiologia , Algoritmos , Simulação por Computador , Hemoglobinas/química , Humanos , Lactente , Recém-Nascido , Recém-Nascido Prematuro , Dinâmica não Linear , Oxiemoglobinas/química , Reprodutibilidade dos Testes , Processamento de Sinais Assistido por Computador
10.
Ann Clin Biochem ; 55(6): 706-709, 2018 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-29792044

RESUMO

Background Faecal immunochemical tests (FIT) for haemoglobin (Hb) are being used in the investigation of colorectal cancer. These tests use antibodies raised to the globin moiety of human Hb. Where the globin structure is abnormal or reduced, it is possible that antibody binding, and thus Hb-detection may be affected. Methods Lysates prepared from whole blood samples of patients with known variants were diluted in manufacturer-specific buffer to 10, 100 and 500 µg Hb/g faeces. These samples were analysed on four FIT analysers and the results compared with samples with no known variant present (normal samples). Results The results from this study show that of 20 variants tested, three showed a decrease in detection by all four analysers. These were ß-thalassaemia major and two fetal cord blood samples. Conclusions Of 20 common Hb variants studied, 17 did not affect detection of Hb by the FIT systems tested. Hb variants leading to a reduction in the presence of a globin chain caused a reduction in Hb detection; in such cases, cancers could be missed.


Assuntos
Neoplasias Colorretais/diagnóstico , Fezes/química , Hemoglobinas , Erros de Diagnóstico/estatística & dados numéricos , Detecção Precoce de Câncer/normas , Hemoglobinas/química , Hemoglobinas/genética , Humanos , Imuno-Histoquímica , Padrões de Referência
11.
Int J Mol Sci ; 19(2)2018 Feb 06.
Artigo em Inglês | MEDLINE | ID: mdl-29415505

RESUMO

During surgical treatment for cerebrovascular diseases, cortical hemodynamics are often controlled by bypass graft surgery, temporary occlusion of arteries, and surgical removal of veins. Since the brain is vulnerable to hypoxemia and ischemia, interruption of cerebral blood flow reduces the oxygen supply to tissues and induces irreversible damage to cells and tissues. Monitoring of cerebral hemodynamics and alteration of cellular structure during neurosurgery is thus crucial. Sequential recordings of red-green-blue (RGB) images of in vivo exposed rat brains were made during hyperoxia, normoxia, hypoxia, and anoxia. Monte Carlo simulation of light transport in brain tissue was used to specify relationships among RGB-values and oxygenated hemoglobin concentration (CHbO), deoxygenated hemoglobin concentration (CHbR), total hemoglobin concentration (CHbT), hemoglobin oxygen saturation (StO2), and scattering power b. Temporal courses of CHbO, CHbR, CHbT, and StO2 indicated physiological responses to reduced oxygen delivery to cerebral tissue. A rapid decrease in light scattering power b was observed after respiratory arrest, similar to the negative deflection of the extracellular direct current (DC) potential in so-called anoxic depolarization. These results suggest the potential of this method for evaluating pathophysiological conditions and loss of tissue viability.


Assuntos
Encéfalo/irrigação sanguínea , Encéfalo/metabolismo , Circulação Cerebrovascular , Hemodinâmica , Oxigênio/metabolismo , Animais , Encéfalo/diagnóstico por imagem , Hemoglobinas/química , Hemoglobinas/metabolismo , Hipóxia , Masculino , Método de Monte Carlo , Ratos , Análise Espectral
12.
Hemoglobin ; 41(4-6): 300-305, 2017.
Artigo em Inglês | MEDLINE | ID: mdl-29210301

RESUMO

In general, the reactivity of cysteine residues of proteins is measured by 5,5'-dithiobis(2-nitrobenzoic acid) (DTNB) kinetics using spectrophotometry. Proteins with several cysteine residues may exhibit varying DTNB kinetics but residue level information can only be obtained with the prior knowledge of their three-dimensional structure. However, this method is limited in its application to the proteins containing chromophores having overlapping absorption profile with 2-nitro-5-thiobenzoic acid, such as hemoglobin (Hb). Additionally, this method is incapable of assigning cysteine reactivity at the residue levels of proteins with unknown crystal structures. However, a mass spectrometry (MS)-based platform might provide a solution to these problems. In the present study, alkylation kinetics of cysteine residues of adult human Hb (Hb A; α2ß2) and sickle cell Hb (Hb S; HBB: c.20A>T) were investigated using matrix-assisted laser desorption/ionization (MALDI) MS. Differential site-specific reactivities of cysteine residues of Hb were investigated using alkylation kinetics with iodoacetamide (IAM). The observed reactivities corroborated well with the differential surface accessibilities of cysteine residues in the crystal structures of human Hb. The proposed method might be used to investigate cysteine reactivities of all the genetic and post-translational variants of Hb discovered to date. In addition, this method can be extended to explore cysteine reactivities of proteins, irrespective of the presence of chromophores and availability of crystal structures.


Assuntos
Cisteína/química , Dinitrobenzenos/química , Hemoglobinas/química , Espectrometria de Massas/métodos , Humanos
13.
Sci Rep ; 7(1): 14794, 2017 11 01.
Artigo em Inglês | MEDLINE | ID: mdl-29093547

RESUMO

MS-based proteomic analysis was combined with in silico quantum mechanical calculations to improve understanding of protein adduction by N-phenylhydroxylamine (PhNHOH) and nitrosobenzene (NOB), metabolic products of aniline. In vitro adduction of model peptides containing nucleophilic sidechains (Cys, His, and Lys) and selected proteins (bovine and human hemoglobin and ß-lactoglobulin-A) were characterized. Peptide studies identified the Cys thiolate as the most reactive nucleophile for these metabolites, a result consistent with in silico calculations of reactivity parameters. For PhNHOH, sulfinamides were identified as the primary adduction products, which were stable following tryptic digestion. Conversely, reactions with NOB yielded an additional oxidized adduct, the sulfonamide. In vitro exposure of human whole blood to PhNHOH and NOB demonstrated that only sulfinamides were formed. In addition to previously reported adduction of ß93Cys of human Hb, two novel sites of adduction were found; α104Cys and ß112Cys. We also report CD and UV-Vis spectroscopy studies of adducted human Hb that revealed loss of α-helical content and deoxygenation. The results provide additional understanding of the covalent interaction of aromatic amine metabolites with protein nucleophiles.


Assuntos
Compostos de Anilina/química , Hemoglobinas/química , Hidroxilaminas/química , Compostos Nitrosos/química , Animais , Bovinos , Humanos , Oxirredução , Domínios Proteicos
14.
J Comput Chem ; 38(28): 2396-2410, 2017 10 30.
Artigo em Inglês | MEDLINE | ID: mdl-28749575

RESUMO

Generalized Born (GB) solvent models are common in acid/base calculations and protein design. With GB, the interaction between a pair of solute atoms depends on the shape of the protein/solvent boundary and, therefore, the positions of all solute atoms, so that GB is a many-body potential. For compute-intensive applications, the model is often simplified further, by introducing a mean, native-like protein/solvent boundary, which removes the many-body property. We investigate a method for both acid/base calculations and protein design that uses Monte Carlo simulations in which side chains can explore rotamers, bind/release protons, or mutate. The fluctuating protein/solvent dielectric boundary is treated in a way that is numerically exact (within the GB framework), in contrast to a mean boundary. Its originality is that it captures the many-body character while retaining the residue-pairwise complexity given by a fixed boundary. The method is implemented in the Proteus protein design software. It yields a slight but systematic improvement for acid/base constants in nine proteins and a significant improvement for the computational design of three PDZ domains. It eliminates a source of model uncertainty, which will facilitate the analysis of other model limitations. © 2017 Wiley Periodicals, Inc.


Assuntos
Proteínas/química , Ácidos/química , Algoritmos , Álcalis/química , Animais , Bases de Dados de Proteínas , Hemoglobinas/química , Humanos , Modelos Químicos , Método de Monte Carlo , Domínios PDZ , Desdobramento de Proteína , Solventes/química , Eletricidade Estática , Termodinâmica
15.
Mater Sci Eng C Mater Biol Appl ; 69: 122-7, 2016 Dec 01.
Artigo em Inglês | MEDLINE | ID: mdl-27612696

RESUMO

This work describes the development of a new biosensor for methylparaben determination using electrocatalytic properties of hemoglobin in the presence of hydrogen peroxide. The voltammetric oxidation of methylparaben by the proposed biosensor in phosphate buffer (pH=7.0), a physiological pH, was studied and it was confirmed that methylparaben undergoes a one electron-one proton reaction in a diffusion-controlled process. The biosensor was fabricated by carbon paste electrode modified with hemoglobin and multiwalled carbon nanotube. Based on the excellent electrochemical properties of the modified electrode, a sensitive voltammetric method was used for determination of methylparaben within a linear range from 0.1 to 13µmolL(-1) and detection limit of 25nmolL(-1). The developed biosensor possessed accurate and rapid response to methylparaben and showed good sensitivity, stability, and repeatability. Finally, the applicability of the proposed biosensor was verified by methylparaben evaluation in various real samples.


Assuntos
Técnicas Biossensoriais/métodos , Hemoglobinas/química , Parabenos/análise , Técnicas Biossensoriais/economia , Técnicas Eletroquímicas , Eletrodos , Humanos , Peróxido de Hidrogênio/química , Concentração de Íons de Hidrogênio , Limite de Detecção , Microscopia Eletrônica de Varredura , Nanotubos de Carbono/química , Oxirredução , Propriedades de Superfície
16.
Int J Comput Assist Radiol Surg ; 11(6): 909-17, 2016 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-27142459

RESUMO

PURPOSE: Multispectral imaging can provide reflectance measurements at multiple spectral bands for each image pixel. These measurements can be used for estimation of important physiological parameters, such as oxygenation, which can provide indicators for the success of surgical treatment or the presence of abnormal tissue. The goal of this work was to develop a method to estimate physiological parameters in an accurate and rapid manner suited for modern high-resolution laparoscopic images. METHODS: While previous methods for oxygenation estimation are based on either simple linear methods or complex model-based approaches exclusively suited for off-line processing, we propose a new approach that combines the high accuracy of model-based approaches with the speed and robustness of modern machine learning methods. Our concept is based on training random forest regressors using reflectance spectra generated with Monte Carlo simulations. RESULTS: According to extensive in silico and in vivo experiments, the method features higher accuracy and robustness than state-of-the-art online methods and is orders of magnitude faster than other nonlinear regression based methods. CONCLUSION: Our current implementation allows for near real-time oxygenation estimation from megapixel multispectral images and is thus well suited for online tissue analysis.


Assuntos
Diagnóstico por Imagem/métodos , Hemoglobinas/química , Processamento de Imagem Assistida por Computador/métodos , Análise Espectral/métodos , Simulação por Computador , Humanos , Método de Monte Carlo , Oxigênio/química , Consumo de Oxigênio , Análise de Regressão , Espalhamento de Radiação
17.
Biochemistry ; 55(4): 686-96, 2016 Feb 02.
Artigo em Inglês | MEDLINE | ID: mdl-26757411

RESUMO

The previously reported nitric oxide precursor [Mn(PaPy2Q)NO]ClO4 (1), where (PaPy2QH) is N,N-bis(2-pyridylmethyl)-amine-N-ethyl-2-quinoline-2-carboxamide, was used to investigate the interaction between NO and the protein truncated hemoglobin N (trHbN) from the pathogen Mycobacterium tuberculosis. Oxy-trHbN is exceptionally efficient at converting NO to nitrate, with a reported rate constant of 7.45 × 10(8) M(-1) s(-1) [Ouellet, H., et al. (2002) Proc. Natl. Acad. Sci. U.S.A. 99, 5902] compared to 4 × 10(7) M(-1) s(-1) for oxy-myoglobin [Eich, R. F., et al. (1996) Biochemistry 35, 6976]. This work analyzed the NO dioxygenation kinetics of wild type oxy-trHbN and a set of variants, as well as the nitrosylation kinetics for the reduced (red-trHbN) forms of these proteins. The NO dioxygenation reaction was remarkably insensitive to mutations, even within the active site, while nitrosylation was somewhat more sensitive. Curiously, the most profound change to the rate constant for nitrosylation was effected by deletion of a 12-amino acid dangling N-terminal sequence. The deletion mutant exhibited first-order kinetics with respect to NO but was zero-order with respect to protein concentration; by contrast, all other variants exhibited second-order rate constants of >10(8) M(-1) s(-1). trHbN boasts an extensive tunnel system that connects the protein exterior with the active site, which is likely the main contributor to the protein's impressive NO dioxygenation efficiency. The results herein suggest that N-terminal deletion abolishes a large scale conformational motion, in the absence of which NO can still readily enter the tunnel system but is then prevented from binding to the heme for an extended period of time.


Assuntos
Proteínas de Bactérias/química , Hemoglobinas/química , Mycobacterium tuberculosis/química , Óxido Nítrico/química , Sequência de Aminoácidos , Proteínas de Bactérias/genética , Hemoglobinas/genética , Cinética , Mycobacterium tuberculosis/genética , Óxido Nítrico/metabolismo , Oxirredução , Deleção de Sequência
18.
J Biomed Opt ; 20(12): 125001, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-26662299

RESUMO

Herein, the optical adequacy of a tumor model prepared with tumor cells grown on the chorioallantoic membrane (CAM) of a chicken egg is evaluated as an alternative to the mouse tumor model to assess the optimal irradiation conditions in photodynamic therapy (PDT). The optical properties of CAM and mouse tumor tissues were measured with a double integrating sphere and the inverse Monte Carlo technique in the 350- to 1000-nm wavelength range. The hemoglobin and water absorption bands observed in the CAM tumor tissue (10 eggs and 10 tumors) are equal to that of the mouse tumor tissue (8 animals and 8 tumors). The optical intersubject variability of the CAM tumor tissues meets or exceeds that of the mouse tumor tissues, and the reduced scattering coefficient spectra of CAM tumor tissues can be equated with those of mouse tumor tissues. These results confirm that the CAM tumor model is a viable alternative to the mouse tumor model, especially for deriving optimal irradiation conditions in PDT.


Assuntos
Membrana Corioalantoide/patologia , Neoplasias/patologia , Neoplasias/terapia , Fotoquimioterapia/métodos , Animais , Anisotropia , Linhagem Celular Tumoral , Embrião de Galinha , Cromatografia Líquida de Alta Pressão , Feminino , Hemoglobinas/química , Camundongos , Camundongos Endogâmicos BALB C , Método de Monte Carlo , Transplante de Neoplasias , Óptica e Fotônica , Protoporfirinas/química , Reprodutibilidade dos Testes , Espalhamento de Radiação , Água/química
19.
J Photochem Photobiol B ; 147: 24-36, 2015 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-25837412

RESUMO

The assessment of biological activities of imidacloprid and its two major metabolites, namely 6-chloronicotinic acid and 2-imidazolidone for nontarget organism, by employing essentially functional biomacromolecules, albumin and hemoglobin as a potentially model with the use of circular dichroism (CD), fluorescence, extrinsic 8-anilino-1-naphthalenesulfonic acid (ANS) fluorescence as well as molecular modeling is the theme of this work. By dint of CD spectra and synchronous fluorescence, it was clear that the orderly weak interactions between amino acid residues within globular proteins were disturbed by imidacloprid, and this event led to marginally alterations or self-regulations of protein conformation so as to lodge imidacloprid more tightly. Both steady state and time-resolved fluorescence suggested that the fluorescence of Trp residues in proteins was quenched after the presence of imidacloprid, corresponding to noncovalent protein-imidacloprid complexes formation and, the reaction belongs to moderate association (K=1.888/1.614×10(4)M(-1) for albumin/hemoglobin-imidacloprid, respectively), hydrogen bonds and π stacking performed a vital role in stabilizing the complexes, as derived from thermodynamic analysis and molecular modeling. With the aid of hydrophobic ANS experiments, subdomain IIA and α1ß2 interface of albumin and hemoglobin, respectively, were found to be preserved high-affinity for imidacloprid. These results ties in with the subsequently molecular modeling laying imidacloprid in the Sudlow's site I and close to Trp-213 residue on albumin, while settling down B/Trp-37 residue nearby in hemoglobin, and these conclusions further confirmed by site-directed mutagenesis and molecular dynamics simulation. But, at the same time, several crucial noncovalent bonds came from other amino acid residues, e.g. Arg-194 and Arg-198 (albumin) and B/Arg-40, B/Asp-99 and B/Asn-102 (hemoglobin) cannot be ignored completely. Based on the comparative studies of binding modes between imidacloprid and its two primary metabolites with globular proteins, it is evident to us that the noncovalent interactions of 6-chloronicotinic acid and 2-imidazolidone with biopolymers are not always to be decreased obviously as a result of the relatively small molecular structures of these metabolites, compared with parent compound imidacloprid. Conversely, this could probably strengthen the weak interactions existed in the macromolecules-metabolites conjugation, or rather, the metabolites such as 6-chloronicotinic acid and 2-imidazolidone contributed drastically to the overall toxicity of imidacloprid.


Assuntos
Hemoglobinas/metabolismo , Imidazóis/efeitos adversos , Imidazóis/química , Imidazóis/metabolismo , Nitrocompostos/efeitos adversos , Nitrocompostos/química , Nitrocompostos/metabolismo , Naftalenossulfonato de Anilina/química , Sítios de Ligação , Dicroísmo Circular , Hemoglobinas/química , Humanos , Interações Hidrofóbicas e Hidrofílicas , Imidazóis/farmacologia , Imidazolidinas/química , Imidazolidinas/metabolismo , Simulação de Dinâmica Molecular , Neonicotinoides , Ácidos Nicotínicos/química , Ácidos Nicotínicos/metabolismo , Nitrocompostos/farmacologia , Conformação Proteica , Soroalbumina Bovina/química , Soroalbumina Bovina/metabolismo , Espectrometria de Fluorescência
20.
Transplantation ; 99(10): 2174-80, 2015 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-25905979

RESUMO

BACKGROUND: Long-term data of patients with type 1 diabetes mellitus (T1D) after simultaneous islet-kidney (SIK) or islet-after-kidney transplantation (IAK) are rare and have never been compared to intensified insulin therapy (IIT). METHODS: Twenty-two patients with T1D and end-stage renal failure undergoing islet transplantation were compared to 70 patients matched for age and diabetes duration treated with IIT and to 13 patients with kidney transplantation alone or simultaneous pancreas-kidney after loss of pancreas function (waiting list for IAK [WLI]). Glycemic control, severe hypoglycemia, insulin requirement, and direct medical costs were analyzed. RESULTS: Glycated hemoglobin decreased significantly from 8.2 ± 1.5 to 6.7 ± 0.9% at the end of follow-up (mean 7.2 ± 2.5 years) in the SIK/IAK and remained constant in IIT (7.8 ± 1.0% and 7.6 ± 1.0) and WLI (7.8 ± 0.8 and 7.9 ± 1.0%). Daily insulin requirement decreased from 0.53 ± 0.15 to 0.29 ± 0.26 U/kg and remained constant in IIT (0.59 ± 0.19 and 0.58 ± 0.23 U/kg) and in WLI (0.76 ± 0.28 and 0.73 ± 0.11 U/kg). Severe hypoglycemia dropped in SIK/IAK from 4.5 ± 9.7 to 0.3 ± 0.7/patient-year and remained constant in IIT (0.1 ± 0.7 and 0.2 ± 0.8/patient-year). Detailed cost analysis revealed US $57,525 of additional cost for islet transplantation 5 years after transplantation. Based on a 5- and 10-year analysis, cost neutrality is assumed to be achieved 15 years after transplantation. CONCLUSIONS: This long-term cohort with more than 7 years of follow-up shows that glycemic control in patients with T1D after SIK/IAK transplantation improved, and the rate of severe hypoglycemia decreased significantly as compared to control groups. Cost analysis revealed that islet transplantation is estimated to be cost neutral at 15 years after transplantation.


Assuntos
Hemoglobinas/química , Hipoglicemia/complicações , Insulina/uso terapêutico , Transplante das Ilhotas Pancreáticas/métodos , Transplante de Rim/métodos , Adulto , Glicemia/química , Doenças Cardiovasculares/sangue , Estudos de Coortes , Diabetes Mellitus Tipo 1/sangue , Feminino , Seguimentos , Custos de Cuidados de Saúde , Humanos , Hipoglicemia/sangue , Hipoglicemia/terapia , Terapia de Imunossupressão , Insulina/sangue , Falência Renal Crônica/sangue , Masculino , Pessoa de Meia-Idade , Transplante de Pâncreas , Fatores de Risco , Fatores de Tempo , Resultado do Tratamento , Listas de Espera
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