Annual changes in the Biodiversity Intactness Index in tropical and subtropical forest biomes, 2001-2012.

Few biodiversity indicators are available that reflect the state of broad-sense biodiversity-rather than of particular taxa-at fine spatial and temporal resolution. One such indicator, the Biodiversity Intactness Index (BII), estimates how the average abundance of the native terrestrial species in a region compares with their abundances in the absence of pronounced human impacts. We produced annual maps of modelled BII at 30-arc-second resolution (roughly 1 km at the equator) across tropical and subtropical forested biomes, by combining annual data on land use, human population density and road networks, and statistical models of how these variables affect overall abundance and compositional similarity of plants, fungi, invertebrates and vertebrates. Across tropical and subtropical biomes, BII fell by an average of 1.9 percentage points between 2001 and 2012, with 81 countries seeing an average reduction and 43 an average increase; the extent of primary forest fell by 3.9% over the same period. We did not find strong relationships between changes in BII and countries' rates of economic growth over the same period; however, limitations in mapping BII in plantation forests may hinder our ability to identify these relationships. This is the first time temporal change in BII has been estimated across such a large region.

River health assessment of the Yellow River source region, Qinghai-Tibetan Plateau, China, based on tolerance values of macroinvertebrates.

For decades, the river health of the Yellow River source region (YRSR) on the Qinghai-Tibetan Plateau has been a focal issue owing to its unique geographic location and ecological functions. This study investigated the ecological status of the headwater streams, the main stem, and the tributaries of the Yellow River in the YRSR using the tolerance values of macroinvertebrates and those related to biotic indices. The macroinvertebrate assemblages of the headwater streams were characterized by lower biodiversity than the tributaries downstream, based on comparisons of taxonomical composition, functional feeding group composition, and the pollution-tolerant capacity of taxa. The headwater streams had a lower ratio (16%) of pollution-sensitive macroinvertebrate taxa than that of the tributaries downstream (30%). The biotic indices (family- and genus-level biotic indices) indicated that the ecological health of the headwater streams was comparably poorer than that of the downstream tributaries. The combined effect of vulnerable natural conditions and increasing human disturbance is likely the main cause of eco-environmental degradation in the Yellow River headwater streams.

Development of a multimetric index based on benthic macroinvertebrates for the assessment of urban stream health in Jinan City, China.

Assessment of the health of urban streams is an important theoretical and practical topic, which is related to the impacts of physiochemical processes, hydrological modifications, and the biological community. However, previous assessments of the urban water quality were predominantly conducted by measuring physical and chemical factors rather than biological monitoring. The purpose of this study was to develop an urban stream multimetric index (USMI) based on benthic macroinvertebrates to assess the health of aquatic ecosystem in Jinan City. Two hundred and eighty-eight samples were collected during two consecutive years (2014-2015) from 48 sites located within the city. Metrics related to the benthic macroinvertebrate richness, diversity, composition and abundance, and functional feeding groups were selected by using box-plots and the Kruskal-Wallis test. The final index derived from selected metrics was divided into five river quality classes (excellent, good, moderate, poor, and bad). A validation procedure using box-plots and the non-parametric Mann-Whitney U test showed that the USMI was useful to assess the health of urban streams.

Ecological risk assessment for Pacific salmon exposed to dimethoate in California.

A probabilistic risk assessment of the potential direct and indirect effects of acute dimethoate exposure to salmon populations of concern was conducted for 3 evolutionarily significant units (ESUs) of Pacific salmon in California. These ESUs were the Sacramento River winter-run chinook, the California Central Valley spring-run chinook, and the California Central Valley steelhead. Refined acute exposures were estimated using the Soil and Water Assessment Tool, a river basin-scale model developed to quantify the impact of land-management practices in large, complex watersheds. Both direct effects (i.e., inhibition of brain acetylcholinesterase activity) and indirect effects (i.e., altered availability of aquatic invertebrate prey) were assessed. Risk to salmon and their aquatic invertebrate prey items was determined to be de minimis. Therefore, dimethoate is not expected to have direct or indirect adverse effects on Pacific salmon in these 3 ESUs. Environ Toxicol Chem 2017;36:532-543. © 2016 SETAC.

Ecological Status of a Patagonian Mountain River: Usefulness of Environmental and Biotic Metrics for Rehabilitation Assessment.

This work evaluates the consequences of anthropogenic pressures at different sections of a Patagonian mountain river using a set of environmental and biological measures. A map of risk of soil erosion at a basin scale was also produced. The study was conducted at 12 sites along the Percy River system, where physicochemical parameters, riparian ecosystem quality, habitat condition, plants, and macroinvertebrates were investigated. While livestock and wood collection, the dominant activities at upper and mean basin sites resulted in an important loss of the forest cover still the riparian ecosystem remains in a relatively good status of conservation, as do the in-stream habitat conditions and physicochemical features. Besides, most indicators based on macroinvertebrates revealed that both upper and middle basin sections supported similar assemblages, richness, density, and most functional feeding group attributes. Instead, the lower urbanized basin showed increases in conductivity and nutrient values, poor quality in the riparian ecosystem, and habitat condition. According to the multivariate analysis, ammonia level, elevation, current velocity, and habitat conditions had explanatory power on benthos assemblages. Discharge, naturalness of the river channel, flood plain morphology, conservation status, and percent of urban areas were important moderators of plant composition. Finally, although the present land use in the basin would not produce a significant risk of soil erosion, unsustainable practices that promotes the substitution of the forest for shrubs would lead to severe consequences. Mitigation efforts should be directed to protect headwater forest, restore altered riparian ecosystem, and to control the incipient eutrophication process.

Ecotoxicological risk assessment of chemical pollution in four Iberian river basins and its relationship with the aquatic macroinvertebrate community status.

Ecotoxicological risk assessment of chemical pollution in four Iberian river basins (Llobregat, Ebro, Júcar and Guadalquivir) was performed. The data set included more than 200 emerging and priority compounds measured at 77 sampling sites along four river basins studied. The toxic units (TU) approach was used to assess the risk of individual compounds and the concentration addition model (CA) to assess the site specific risk. Link between chemical pollution and aquatic macroinvertebrate communities in situ was examined by using four biological indexes; SPEAR ("Species at Risk Index") as the indicator of decline of sensitive species in relation to general organic (SPEARorganic) and pesticides (SPEARpesticides) pollution; and Shannon and Margalef biodiversity indexes. The results of the study suggested that organic chemicals posed the risk of acute effects at 42% of the sampling sites and the risk of chronic effects at all the sites. Metals posed the acute risk at 44% of the sites. The main drivers of the risk were mainly pesticides and metals. However, several emerging contaminants (e.g. the antidepressant drug sertraline and the disinfectant triclosan) were contributing to the chronic effects risk. When risk associated with metals and organic chemicals was compared, the latter dominated in 2010, mainly due to the presence of highly toxic pesticides, while metals did in 2011. Compounds that are not regulated on the European level were posing the risk of chronic effects at 23% of the sites. The decline of sensitive macroinvertebrate taxa expressed in terms of SPEAR index was correlated with the increase of toxic stress related to organic compounds Biodiversity indexes were negatively correlated with the metals and the urban land use type in the catchment.

Ecological Risk Assessment of a Metal-Contaminated Area in the Tropics. Tier II: Detailed Assessment.

This study presents data on the detailed evaluation (tier 2) of a site-specific ecological risk assessment (ssERA) in a former smelter area contaminated with metals (Santo Amaro, Bahia, Brazil). Combining information from three lines of evidence (LoE), chemical (ChemLoE), ecotoxicological (EcotoxLoE) and ecological (EcoLoE), in the Triad approach, integrated risk values were calculated to rank sites and confirm the potential risk disclosed with tier 1. Risk values were calculated for the habitat and for the retention functions in each sampling point. Habitat function included the ChemLoE calculated from total metal concentrations. The EcotoxLoE was based on reproduction tests with terrestrial invertebrates (Folsomia candida, Enchytraeus crypticus, Eisenia andrei), shoot length and plant biomass (Avena sativa, Brassica rapa). For the EcoLoE, ecological parameters (microbial parameters, soil invertebrate community, litter breakdown) were used to derive risk values. Retention function included the ChemLoE, calculated from extractable metal concentrations, and the EcotoxLoE based on eluate tests with aquatic organisms (Daphnia magna reproduction and Pseudokirchneriella subcapitata growth). Results related to the habitat function indicated that the metal residues are sufficient to cause risk to biota, while the low metal levels in extracts and the general lack of toxicity in aquatic tests indicated a high soil retention capacity in most sampling points. Integrated risk of tier 2 showed the same trend of tier 1, suggesting the need to proceed with remediation actions. The high risk levels were related to direct toxicity to organisms and indirect effects, such as failure in the establishment of vegetation and the consequent loss of habitat quality for microorganisms and soil fauna. This study shed some light on the selection of tools for the tier 2 of an ssERA in tropical metal-contaminated sites, focusing on ecological receptors at risk and using available chemical methods, ecological surveys and ecotoxicity tests.

Assessment of Arctic community wastewater impacts on marine benthic invertebrates.

This study sought to understand the performance of arctic treatment systems and the impact of wastewater effluent on benthic invertebrate communities in arctic receiving water habitats. Effluent quality and benthic impacts were monitored in the receiving water of five communities across Nunavut that differed in the type and level of treatment achieved by wastewater infrastructure, the volume of effluent and receiving water mixing environment. We detected minimal impacts to benthic communities (<225 m linear distance from the effluent source) in four out of the five communities (Grise Fiord, Kugaaruk, Pond Inlet, and Pangnirtung), where the population was <2000 people. In these small communities impacts were characterized by increases or decreases in species richness, diversity, evenness, and density, and some differences in benthic species composition. This was in contrast to benthic sediments in Iqaluit (population 6699), which were devoid of benthic fauna up to 580 m from the effluent source in response to sediment anoxia. Variation in benthic community response between sampling locations was attributed primarily to differences in effluent volume, with effluent quality and receiving water hydrodynamics playing secondary roles. The results of this study will help to inform the development of northern specific treatment performance standards which will aid in prioritizing community wastewater system upgrades in arctic communities.

Repeated rapid assessment surveys reveal contrasting trends in occupancy of marinas by non-indigenous species on opposite sides of the western English Channel.

Rapid assessment surveys of non-indigenous species (NIS) of sessile invertebrates were made at seven marinas in NW France and 10 marinas in SW England in 2010, and repeated in 2013. Fourteen NIS were recorded, 12 of which were seen on both coasts. Site occupancy differed between the opposite sides of the western English Channel. In Brittany, most species occurred at most sites in both 2010 and 2013. In 2010, site occupancy in Devon & Cornwall was distinctly lower; by 2013, the difference compared to Brittany had narrowed considerably, largely because of rapid colonisation of additional sites by species that were infrequent in 2010. Three more of the recent NIS are present in Devon & Cornwall but have still not become widespread. It is concluded that the recently introduced fouling animals studied here are longer established in NW France than in SW England, and have probably spread northwards across the Channel.

An alert system for triggering different levels of coastal management urgency: Tunisia case study using rapid environmental assessment data.

Rapid environmental assessment (REA) involves scoring abundances of ecosystems/species groups and magnitude of pressures, concurrently, using the same logarithmic (0-6) assessment scale. We demonstrate the utility of REA data for an alert system identifying different levels of coastal management concern. Thresholds set for abundances/magnitudes, when crossed, trigger proposed responses. Kerkennah, Tunisia, our case study, has significant natural assets (e.g. exceptional seagrass and invertebrate abundances), subjected to varying levels of disturbance and management concern. Using REA thresholds set, fishing, green algae/eutrophication and oil occurred at 'low' levels (scores 0-1): management not (currently) necessary. Construction and wood litter prevailed at 'moderate' levels (scores 2-4): management alerted for (further) monitoring. Solid waste densities were 'high' (scores 5-6): management alerted for action; quantities of rubbish were substantial (20-200 items m⁻¹ beach) but not unprecedented. REA is considered a robust methodology and complementary to other rapid assessment techniques, environmental frameworks and indicators of ecosystem condition.

Nontarget organism effects tests on eCry3.1Ab and their application to the ecological risk assessment for cultivation of Event 5307 maize.

Event 5307 transgenic maize produces the novel insecticidal protein eCry3.1Ab, which is active against certain coleopteran pests such as Western corn rootworm (Diabrotica virgifera virgifera). Laboratory tests with representative nontarget organisms (NTOs) were conducted to test the hypothesis of no adverse ecological effects of cultivating Event 5307 maize. Estimates of environmental eCry3.1Ab concentrations for each NTO were calculated from the concentrations of eCry3.1Ab produced by 5307 maize in relevant plant tissues. Nontarget organisms were exposed to diets containing eCry3.1Ab or diets comprising Event 5307 maize tissue and evaluated for effects compared to control groups. No statistically significant differences in survival were observed between the control group and the group exposed to eCry3.1Ab in any organism tested. Measured eCry3.1Ab concentrations in the laboratory studies were equal to or greater than the most conservative estimates of environmental exposure. The laboratory studies corroborate the hypothesis of negligible ecological risk from the cultivation of 5307 maize.

Evaluation of an alternate method for sampling benthic macroinvertebrates in low-gradient streams sampled as part of the National Rivers and Streams Assessment.

Benthic macroinvertebrates are sampled in streams and rivers as one of the assessment elements of the US Environmental Protection Agency's National Rivers and Streams Assessment. In a 2006 report, the recommendation was made that different yet comparable methods be evaluated for different types of streams (e.g., low gradient vs. high gradient). Consequently, a research element was added to the 2008-2009 National Rivers and Streams Assessment to conduct a side-by-side comparison of the standard macroinvertebrate sampling method with an alternate method specifically designed for low-gradient wadeable streams and rivers that focused more on stream edge habitat. Samples were collected using each method at 525 sites in five of nine aggregate ecoregions located in the conterminous USA. Methods were compared using the benthic macroinvertebrate multimetric index developed for the 2006 Wadeable Streams Assessment. Statistical analysis did not reveal any trends that would suggest the overall assessment of low-gradient streams on a regional or national scale would change if the alternate method was used rather than the standard sampling method, regardless of the gradient cutoff used to define low-gradient streams. Based on these results, the National Rivers and Streams Survey should continue to use the standard field method for sampling all streams.

Key features of intertidal food webs that support migratory shorebirds.

The migratory shorebirds of the East Atlantic flyway land in huge numbers during a migratory stopover or wintering on the French Atlantic coast. The Brouage bare mudflat (Marennes-Oléron Bay, NE Atlantic) is one of the major stopover sites in France. The particular structure and function of a food web affects the efficiency of carbon transfer. The structure and functioning of the Brouage food web is crucial for the conservation of species landing within this area because it provides sufficient food, which allows shorebirds to reach the north of Europe where they nest. The aim of this study was to describe and understand which food web characteristics support nutritional needs of birds. Two food-web models were constructed, based on in situ measurements that were made in February 2008 (the presence of birds) and July 2008 (absence of birds). To complete the models, allometric relationships and additional data from the literature were used. The missing flow values of the food web models were estimated by Monte Carlo Markov Chain--Linear Inverse Modelling. The flow solutions obtained were used to calculate the ecological network analysis indices, which estimate the emergent properties of the functioning of a food-web. The total activities of the Brouage ecosystem in February and July are significantly different. The specialisation of the trophic links within the ecosystem does not appear to differ between the two models. In spite of a large export of carbon from the primary producer and detritus in winter, the higher recycling leads to a similar retention of carbon for the two seasons. It can be concluded that in February, the higher activity of the ecosystem coupled with a higher cycling and a mean internal organization, ensure the sufficient feeding of the migratory shorebirds.

Toxicological impact assessment of heavy metal contamination on macrobenthic communities in southern coastal sediments of Korea.

In the heavily industrialized Masan Bay of southern coast, Korea, the potential harmful effects of heavy metals (Cd, Co, Cu, Ni, Pb, Sn, Zn, and Hg) were evaluated in terms of the pollution load index (PLI) and ecological risk assessment index (ERI) methods, and the results obtained were considered alongside the health of the macrobenthic fauna communities. The results revealed that the bay sediments, especially in the inner bay and the outfall area of a sewage treatment plant, are exposed to moderate to serious levels of metal pollution. Hg and Cd contributed the most to the potential toxicity response indices in sediments recently deposited in the bay. The potential ecological risk assessment of heavy metals in the bay was highlighted by the use of the benthic biological pollution index (BPI), suggesting that the ERI is a useful toxicity response index, which can quantify the overall ecological risk level to a target environment.

[Eco-environmental quality assessment of Luoyuan Bay, Fujian province of East China based on biotic indices].

In this paper, two types of eco-environmental quality assessment indices that have been successively applied abroad, i.e., the AZTI marine biotic index (AMBI) and BENTIX index based on the ecological sensitivity of benthos and the multivariate-AMBI (M-AMBI), a multivariate index integrating AMBI, Shannon Index H', and species richness, were applied to assess the eco-environmental quality of Luoyuan Bay, Fujian Province of East China, and the assessment results were compared with those by the H', an index based on community structure, which is often applied in China, aimed to test the applicability of these indices to the Bay, and to provide reference in selecting the indices for assessing our coastal eco-environment quality. Similar assessment results were obtained by applying AMBI and BENTIX index, and M-AMBI and H'. At most stations (13 of 16), the assessment results by applying AMBI and BENTIX index, M-AMBI and H' were coincident, respectively; while at the other 3 stations, the assessment grade was high or good based on AMBI and BENTIX index, but moderate based on M-AMBI and H'. Taking account of the richness, individual abundance, and ecological group composition of the benthos in Luoyuan Bay, the assessment results based on M-AMBI and H' could be more reasonable. It was suggested that for the Luoyuan Bay which has a high level of eutrophication and low organic matter enrichment in sediment and is dominated by sensitive benthos species, M-AMBI and H' could be more applicative and objective than AMBI and BENTIX index in assessing its eco-environmental quality.

Sediment contamination in Lyons Creek East, a tributary of the Niagara River: part I. Assessment of benthic macroinvertebrates.

Sediments in Lyons Creek East (Welland, Ontario), a tributary of the Niagara River and part of the Niagara River Area of Concern, which exceed screening-level environmental-quality criteria for multiple contaminants, were assessed for biological impacts using information from multiple lines of evidence. An initial chemical survey indicated the primary contaminants of concern to be polychlorinated biphenyls (PCBs), polycyclic aromatic hydrocarbons (PAHs), zinc, and p,p'-DDE due to frequent exceedences of sediment guidelines. A subsequent study focused on the chemical composition of sediment, status of benthic invertebrate communities, contaminant bioaccumulation in resident benthos, and sediment toxicity to laboratory-exposed organisms. Chemical and biological conditions in the creek were compared with those in reference creeks using both multivariate (cluster analysis and ordination) and univariate (regression) techniques. Sediment PCBs (≤ 19 µg/g), PAHs (≤ 63 µg/g), and Zn (≤ 7969 µg/g) were increased above the sediment-quality guidelines along most of the creek; however, the upper 1.5 km portion of the creek was the most highly contaminated and therefore the main focus for biological study. Although severe toxicity was evident at several locations in the upper creek, resident benthic communities were minimally affected by sediment contamination. The cause of toxicity was likely related to a combination of stressors, including PCBs, PAHs, and metals. Due to its biomagnifiable nature, bioaccumulation focused on PCBs; concentrations in resident macroinvertebrates were ≤ 2 orders of magnitude greater than those found in reference creeks and were above tissue residue guidelines, indicating a potential risk for consumers of benthos. This risk was not limited to the upper 1.5 km where other effects were seen.

[Comparison and application of biological indices of macroinvertebrates in river health assessment].

The different biological indices usually result in different results in the river health assessment. It is imperative and valuable to identify the correlation among different indices and their applicability for assessing stream health. In this study, totally five biological indices were selected and compared in the investigation of macroinvertebrate communities in the Taizi river. The results showed significant correlations among the five indices. However, due to the difference in health rating criteria for each biological index, different results of health ratings were obtained when different indices were used. The responding sensitivities to disturbance caused by different types of human activities were studied for each index to determine their applicability in assessment of river health. The data indicated that the BI index had significant correlations with land use and dissolved oxygen and was a good indicator for these two types of disturbance. The FBI index could well reflect the acid and ammonia contamination of the investigated stream. Strong negative correlation was found between the ASPT index and several water quality parameters concerning oxygen consumption. The B-IBI index had a significant negative correlation with the total nitrogen concentration, being a good indicator for nitrogen contamination. Besides, the B-IBI index was also significantly correlated to disturbance caused by other types of human activities and can be used as an indicator for both land use and aquatic pollution. To be concluded, the BI index and ASPT index can be individually used to assess the land use of a riverine and the impact of hydrochemical index on the ecosystems, whereas the B-IBI index could be a suitable indicator for evaluating the stream health correlated with various human activities.

Macrobenthic community for assessment of estuarine health in tropical areas (Northeast, Brazil): review of macrofauna classification in ecological groups and application of AZTI Marine Biotic Index.

The aim of the present study was to investigate the ecological quality of tropical estuaries on the northeastern coast of Brazil using the AMBI. Macrofauna classification based on ecological groups was reviewed using the Indicator Value (IndVal) coefficient. The results indicate that the ecosystems exhibit some level of disturbance. Most sites are situated between slightly-moderately disturbed boundaries due to the higher proportion of Nematoda (assigned here as Ecological Group I) and of Oligochaeta and Tubificidae (both classified as Ecological Group V). The AMBI proved efficient in evaluating environmental status, although the applicability of this index requires adjustments regarding some species in ecological groups. The present study also highlights the merits of the IndVal method for examining the assignments of species/taxa to an ecological group and demonstrates the validity of this coefficient is an assessment tool. Moreover, the complementary use of different methods is recommended for the assessment of ecosystem quality.

Biological assessment of aquaculture effects on effluent-receiving streams in Ghana using structural and functional composition of fish and macroinvertebrate assemblages.

Biological assessment of aquatic ecosystems is widely employed as an alternative or complement to chemical and toxicity testing due to numerous advantages of using biota to determine ecosystem condition. These advantages, especially to developing countries, include the relatively low cost and technical requirements. This study was conducted to determine the biological impacts of aquaculture operations on effluent-receiving streams in the Ashanti Region of Ghana. We collected water, fish and benthic macroinvertebrate samples from 12 aquaculture effluent-receiving streams upstream and downstream of fish farms and 12 reference streams between May and August of 2009, and then calculated structural and functional metrics for biotic assemblages. Fish species with non-guarding mode of reproduction were more abundant in reference streams than downstream (P = 0.0214) and upstream (P = 0.0251), and sand-detritus spawning fish were less predominant in reference stream than upstream (P = 0.0222) and marginally less in downstream locations (P = 0.0539). A possible subsidy-stress response of macroinvertebrate family richness and abundance was also observed, with nutrient (nitrogen) augmentation from aquaculture and other farming activities likely. Generally, there were no, or only marginal differences among locations downstream and upstream of fish farms and in reference streams in terms of several other biotic metrics considered. Therefore, the scale of impact in the future will depend not only on the management of nutrient augmentation from pond effluents, but also on the consideration of nutrient discharges from other industries like fruit and vegetable farming within the study area.

Ecological quality assessment of small estuaries from the Portuguese coast based on benthic macroinvertebrate assemblages indices.

Benthic macroinvertebrates communities are the most consistently emphasized biotic component of aquatic ecosystems and are one of the biological indicators required for assessment by the European Water Framework Directive. In this context, several indices based on these communities have been developed in order to assess ecological quality of estuarine systems. In the present work we used AMBI, M-AMBI, BENTIX and BAT to distinguish ecological status of five small estuarine systems of the Portuguese south and southwest coasts. Although indices outputs did not differ between systems and sampling seasons, results indicated that the metrics in which these indices are based could differentiate community structures as a result of two main gradients that force these communities: the natural variability, and the anthropogenic impact.