Life cycle assessment and techno-economic analysis of wood-based biorefineries for cellulosic ethanol production.

Poplar is widely used in the paper industry and accompanied by abundant branches waste, which is potential feedstock for bioethanol production. Acid-chlorite pretreatment can selectively remove lignin, thereby significantly increasing enzymatic efficiency. Moreover, lignin residues valorization via gasification-syngas fermentation can achieve higher fuel yield. Herein, environmental and economic aspects were conducted to assess technological routes, which guides further process optimization. Life cycle assessment results show that wood-based biorefineries especially coupling scenarios have significant advantages in reducing global warming potential in contrast to fossil-based automotive fuels. Normalization results indicate that acidification potential surpasses other indicators as the primary impact category. In terms of economic feasibility, coupling scenarios present better investment prospects. Bioethanol yield is the most critical factor affecting market competitiveness. Minimum ethanol selling price below ethanol international market price is promising with higher-levels technology. Further work should be focused on technological breakthrough, consumable reduction or replacement.

The carbon costs of global wood harvests.

After agriculture, wood harvest is the human activity that has most reduced the storage of carbon in vegetation and soils1,2. Although felled wood releases carbon to the atmosphere in various steps, the fact that growing trees absorb carbon has led to different carbon-accounting approaches for wood use, producing widely varying estimates of carbon costs. Many approaches give the impression of low, zero or even negative greenhouse gas emissions from wood harvests because, in different ways, they offset carbon losses from new harvests with carbon sequestration from growth of broad forest areas3,4. Attributing this sequestration to new harvests is inappropriate because this other forest growth would occur regardless of new harvests and typically results from agricultural abandonment, recovery from previous harvests and climate change itself. Nevertheless some papers count gross emissions annually, which assigns no value to the capacity of newly harvested forests to regrow and approach the carbon stocks of unharvested forests. Here we present results of a new model that uses time discounting to estimate the present and future carbon costs of global wood harvests under different scenarios. We find that forest harvests between 2010 and 2050 will probably have annualized carbon costs of 3.5-4.2 Gt CO2e yr-1, which approach common estimates of annual emissions from land-use change due to agricultural expansion. Our study suggests an underappreciated option to address climate change by reducing these costs.

Assessment of biodegradation in ancient archaeological wood from the Middle Cemetery at Abydos, Egypt.

Abydos is a large, complex archaeological site located approximately 500 km south of Cairo in Upper Egypt. The site has served as a cemetery for thousands of years and is where most of the Early Dynastic royal tombs are located. North Abydos includes the Middle Cemetery and the North Cemetery, which are separated from each other by a wadi. The Middle Cemetery was the burial ground for important Sixth Dynasty (2407-2260 BC) officials and over time for thousands of elite and non-elite individuals as well. Excavations at the core area of the Old Kingdom mortuary landscape have revealed many culturally important wooden objects but these are often found with extensive deterioration that can compromise their preservation. The objectives of this study were to characterize the biodegradation that has taken place in excavated wooden objects, elucidate the type of wood degradation present, obtain information on soil properties at the site and identify fungi currently associated with the wood and soils. Light and scanning electron microscopy studies were used to observe the micromorphological characteristics of the wood, and culturing on different media was done to isolate fungi. Identification of the fungi was done by examining morphological characteristics and extracting rDNA from pure cultures and sequencing the ITS region. Wooden objects, made from Cedrus, Juniperus and Acacia as well as several unidentified hardwoods, were found with extensive degradation and were exceedingly fragile. Termite damage was evident and frass from the subterranean termites along with sand particles were present in most woods. Evidence of soft rot attack was found in sections of wood that remained. Fungi isolated from wood and soils were identified as species of Aspergillus, Chaetomium, Cladosporium, Fusarium, Penicillium, Stemphylium Talaromyces and Trichoderma. Results provide important information on the current condition of the wood and gives insights to the identity of the fungi in wood and soils at the site. These results provide needed information to help develop conservation plans to preserve these degraded and fragile wooden objects.

Interstitial water microbial communities as an indicator of microbial denitrifying capacity in wood-chip bioreactors.

The discharge from food production greenhouses (greenhouse effluent) contains high nutrient and salt concentrations, which, if directly released, can have adverse effects on the environment. Wood-chip bioreactors are increasingly popular passive water treatment systems favoured for their economical denitrification in treating agricultural field tile drainage. Microbial communities are central to denitrification; however little is known about the maturation of microbial communities in wood-chip bioreactors treating greenhouse effluents. In this study, multiple subsurface flow wood-chip bioreactors, each vegetated with a different plant species, together with an unplanted unit, received synthetic greenhouse effluent with elevated nitrate concentrations. The hybrid bioreactors were operated for over 2 years, during which time water samples were collected from the inlet, outlet and within the reactors. The increasing denitrification rate in the bioreactor planted with Typha angustifolia (narrowleaf cattail) correlated with increasing microbial activity and metabolic richness, measured by the carbon utilization patterns in Biolog® EcoPlates. Increased denitrifying gene (nirS) copies (determined by quantitative polymerase chain reaction, qPCR), and near-complete nitrate removal were observed in the T. angustifolia and unplanted reactors after 16 and 23 months of operation respectively. The findings suggested that an acclimation period of at least one year can be expected in unseeded bioreactors planted with T. angustifolia, while bioreactors without vegetation may require a longer time to maximize their denitrification capacity. These results are important for the design and operation of wood-chip bioreactors, which are expected to be more commonly applied in the future.

Elementary budget of stag beetle larvae associated with selective utilization of nitrogen in decaying wood.

Wood degradation by insects plays important roles for the forest matter cycling. Since wood is deficient in nitrogen compared to the insect body, wood-feeding insects need to assimilate the nitrogen selectively and discard an excess carbon. Such a stoichiometric imbalance between food and body will cause high metabolic cost; therefore, wood-feeding insects may somehow alleviate the stoichiometric imbalance. Here, we investigated the carbon and nitrogen budgets of the larvae of stag beetle, Dorcus rectus, which feed on decaying wood. Assimilation efficiency of ingested wood was 22%, and those values based on the carbon and nitrogen were 27 and 45%, respectively, suggesting the selective digestion of nitrogen in wood. Element-based gross growth efficiency was much higher for nitrogen (45%) than for carbon (3%). As a result, the larvae released 24% of the ingested carbon as volatile, whereas almost no gaseous exchange was observed for nitrogen. Moreover, solubility-based elementary analysis revealed that the larvae mainly utilized alkaline-soluble-water-insoluble fraction of wood, which is rich in nitrogen. Actually, the midgut of the larvae was highly alkaline (pH 10.3). Stag beetle larvae are known to exhibit coprophagy, and here we also confirmed that alkaline-soluble-water-insoluble nitrogen increased again from fresh feces to old feces in the field. Stable isotope analysis suggested the utilization of aerial nitrogen by larvae; however, its actual contribution is still disputable. Those results suggest that D. rectus larvae selectively utilize alkaline-soluble nitrogenous substrates by using their highly alkaline midgut, and perhaps associate with microbes that enhance the nitrogen recycling in feces.

A metabolomic assessment of NAC154 transcription factor overexpression in field grown poplar stem wood.

Several xylem-associated regulatory genes have been identified that control processes associated with wood formation in poplar. Prominent among these are the NAC domain transcription factors (NACs). Here, the putative involvement of Populus NAC154, a co-ortholog of the Arabidopsis gene SND2, was evaluated as a regulator of "secondary" biosynthetic processes in stem internode tissues by interrogating aqueous methanolic extracts from control and transgenic trees. Comprehensive untargeted metabolite profiling was accomplished with a liquid chromatography-mass spectrometry platform that utilized two different chromatographic supports (HILIC and reversed phase) and both positive and negative ionization modes. Evaluation of current and previous year tissues provided datasets for assessing the effects of NAC154 overexpression in wood maturation processes. Phenolic glycoside levels as well as those of oligolignols, sucrose and arginine were modulated with phenotypic and chemotypic traits exhibiting similar trends. Specifically, increased levels of arginine in the NAC154 overexpressing tissues supports a role for the transcription factor in senescence/dormancy-associated processes.

Treatment of metal-contaminated wastewater: a comparison of low-cost biosorbents.

This study aimed to identify some optimum adsorption conditions for the use of low-cost adsorbent, seaweed (Ascophyllum nodosum), sawdust and reed plant (Phragmites australis) root, in the treatment of metal contaminated wastewater for the removal of cadmium, chromium and lead. The effect of pH on the absorption capacity of each of these biosorbents was found to be significant and dependent on the metal being removed. Post-adsorption FTIR analysis showed significant binding activities at the nitro NO groups site in all biosorbents, especially for lead. Competitive metal binding was found to have possibly affected the adsorption capacity for chromium by A. nodosum more than it affected sawdust and P. australis root. Adsorption is believed to take place mainly by ion exchange particularly at low pH values. P. australis root exhibited the highest adsorption for chromium at pH 2, cadmium at pH 10 and lead at pH 7. A. nodosum seaweed species demonstrated the highest adsorption capacity of the three biosorbents used in the study, for cadmium at pH 7 and for lead at pH 2. Sawdust proved to be an efficient biosorbent for lead removal only at pH 7 and 10. No significant effect of temperature on adsorption capacity was observed, particularly for cadmium and lead removal.

Comparison of lab, pilot, and industrial scale low consistency mechanical refining for improvements in enzymatic digestibility of pretreated hardwood.

Mechanical refining has been shown to improve biomass enzymatic digestibility. In this study industrial high-yield sodium carbonate hardwood pulp was subjected to lab, pilot and industrial refining to determine if the mechanical refining improves the enzymatic hydrolysis sugar conversion efficiency differently at different refining scales. Lab, pilot and industrial refining increased the biomass digestibility for lignocellulosic biomass relative to the unrefined material. The sugar conversion was increased from 36% to 65% at 5 FPU/g of biomass with industrial refining at 67.0 kWh/t, which was more energy efficient than lab and pilot scale refining. There is a maximum in the sugar conversion with respect to the amount of refining energy. Water retention value is a good predictor of improvements in sugar conversion for a given fiber source and composition. Improvements in biomass digestibility with refining due to lab, pilot plant and industrial refining were similar with respect to water retention value.

From missing source to missing sink: long-term changes in the nitrogen budget of a northern hardwood forest.

Biogeochemical monitoring for 45 years at the Hubbard Brook Experimental Forest in New Hampshire has revealed multiple surprises, seeming contradictions, and unresolved questions in the long-term record of ecosystem nitrogen dynamics. From 1965 to 1977, more N was accumulating in living biomass than was deposited from the atmosphere; the "missing" N source was attributed to biological fixation. Since 1992, biomass accumulation has been negligible or even negative, and streamwater export of dissolved inorganic N has decreased from ~4 to ~1 kg of N ha(-1) year(-1), despite chronically elevated atmospheric N deposition (~7 kg of N ha(-1) year(-1)) and predictions of N saturation. Here we show that the ecosystem has shifted to a net N sink, either storing or denitrifying ~8 kg of N ha(-1) year(-1). Repeated sampling over 25 years shows that the forest floor is not detectably accumulating N, but the C:N ratio is increasing. Mineral soil N has decreased nonsignificantly in recent decades, but the variability of these measurements prevents detection of a change of <700 kg of N ha(-1). Whether the excess N is accumulating in the ecosystem or lost through denitrification will be difficult to determine, but the distinction has important implications for the local ecosystem and global climate.

Life cycle assessment of ethanol derived from sawdust.

The life cycle of ethanol derived from sawdust by enzymatic hydrolysis process is evaluated to determine if environmentally preferable and economically viable ethanol can be produced. Two scenarios are considered to estimate net energy consumption, greenhouse gas (GHG) emission and production costs. The estimated net energy consumption, GHG emission and production costs are 12.29-13.37 MJ/L, 0.75-0.92 kg CO2 e/L and about $0.98-$1.04/L, respectively depending on the scenarios of this study. The result confirmed that environmental benefit can be gained with present technologies; however, economic viability remains doubtful unless Feed-in Tariff (FiT) is considered. The production cost of ethanol reduces to $0.5/L, if FiT is considered to be $0.025/MJ. This study indicates that the implementation of FiT program for ethanol industry not only helps Ontario mitigate GHG emissions, but may also attract more investment and create rural employment opportunities.

Assessment of Cryptococcus albidus for biopulping of eucalyptus.

Cryptococcus albidus shows delignification activity in nature. It was used for the biopulping of eucalyptus wood (Eucalyptus grandis) to access its potential for industrial application in the pulp and paper industry. Enzyme analysis on days 15, 30, and 60 showed the presence of laccase and xylanase as key enzymes. The production of endo-glucanase (CMCase) and exo-glucanase (FPase) was very low. Scanning electron microscopy (SEM) showed the surface colonization of wood and loosening of wood fibers in C. albidus-treated samples. Fourier-transformation infrared spectroscopy (FT-IR) indicated the chemical modification of eucalyptus wood. Denaturing gradient gel electrophoresis (DGGE) analysis on days 15, 30, and 60 confirmed the presence of C. albidus throughout the experiments. Cryptococcu albidus was able to suppress the growth of a native population. Further, after 60 days both the control and treated eucalyptus wood chips were given kraft pulping treatment. The kappa number of pulp of control wood was 21 and for treated wood was 17. Kappa number is considered a measure of lignin content in wood; hence the treatment of eucalyptus by C. albidus (biopulping) was effective in reducing its lignin content and can be used for biopulping in the pulp and paper industry.

Evaluation energy efficiency of bioconversion knot rejects to ethanol in comparison to other thermochemically pretreated biomass.

Rejects from sulfite pulp mill that otherwise would be disposed of by incineration were converted to ethanol by a combined physical-biological process that was comprised of physical refining and simultaneous saccharification and fermentation (SSF). The energy efficiency was evaluated with comparison to thermochemically pretreated biomass, such as those pretreated by dilute acid (DA) and sulfite pretreatment to overcome recalcitrance of lignocelluloses (SPORL). It was observed that the structure deconstruction of rejects by physical refining was indispensable to effective bioconversion but more energy intensive than that of thermochemically pretreated biomass. Fortunately, the energy consumption was compensated by the reduced enzyme dosage and the elevated ethanol yield. Furthermore, adjustment of disk-plates gap led to reduction in energy consumption with negligible influence on ethanol yield. In this context, energy efficiency up to 717.7% was achieved for rejects, much higher than that of SPORL sample (283.7%) and DA sample (152.8%).

The use of wooden sticks to assess stream ecosystem functioning: comparison with leaf breakdown rates.

Breakdown of organic matter is a key process in streams and rivers, and thus, it has potential to assess functional impairment of river ecosystems. Because the litter-bag method commonly used to measure leaf breakdown is time consuming and expensive, several authors proposed to measure breakdown of wooden sticks instead. Nevertheless, currently there is little information on the performance of wooden sticks versus that of leaves. We compared the breakdown of tongue depressors made of untreated poplar wood, to that of six common leaf species in two large streams in the Basque Country (northern Spain), one polluted and the other unpolluted. Breakdown rates ranged from 0.0011 to 0.0120 day(-1), and were significantly lower in the polluted stream. Wooden sticks performed very similarly to leaves, but were less affected by flood-induced physical abrasion. The ranking of the materials according to their breakdown rate was consistent, irrespective of the stream. The experiments with leaves were 10 times more costly for breakdown rate, 4 times if we include the rest of the variables measured. Therefore wooden sticks offer a promising tool to assess river ecosystem functioning, although more research is necessary to define the thresholds for ecosystem functional impairment.

Effect of sawdust addition on composting of separated raw and anaerobically digested pig manure.

Manures need the addition of carbon-rich bulking agents to conserve N during composting, which increases the cost of the composting process. The recommended proportion of manure/sawdust, based on a carbon (C):nitrogen (N) ratio, is approximately 3:2. Two composting experiments were conducted to determine the impact of varying the proportion of sawdust to either separated raw, or separated anaerobically digested pig manures. To determine stability and maturity of the final compost, oxygen uptake rate (OUR) and germination index (GI) tests were conducted. For both experiments, three treatments were employed: manure-only (Treatment A), manure/sawdust mixed 4:1, fresh weight (Treatment B), and manure/sawdust mixed 3:2, fresh weight (Treatment C). The mixtures were composted in tumblers for 56 days with regular turning. The composting material was tested over the study duration for temperature, pH, water content, organic matter, C:N ratio and bulk density. For both Treatments B and C, the GI indicated low levels of phytotoxicity, and OUR values were lower than the recommended Irish threshold of 13 mmol O(2) kg OM(-1) h(-1), indicating that a high quality compost was produced. The proportion of sawdust to separated manure used can be reduced to make a cost saving, while still producing a stable end-product: 60% less sawdust is required to compost at a manure-to-sawdust ratio of 4:1 compared to the previously recommended ratio of 3:2.

Assessing the effects of multiple stressors on the functioning of Mediterranean rivers using poplar wood breakdown.

Mediterranean rivers in the Iberian Peninsula are being increasingly affected by human activities, which threaten their ecological status. A clear picture of how do these multiple stressors affect river ecosystem functioning is still lacking. We addressed this question by measuring a key ecosystem process, namely breakdown of organic matter, at 66 sites distributed across Mediterranean Spain. We performed breakdown experiments by measuring the mass lost by wood sticks for 54 to 106 days. Additionally, we gathered data on physico-chemical, biological and geomorphological characteristics of study sites. Study sites spanned a broad range of environmental characteristics and breakdown rates varied fiftyfold across sites. No clear geographic patterns were found between or within basins. 90th quantile regressions performed to link breakdown rates with environmental characteristics included the following 7 variables in the model, in decreasing order of importance: altitude, water content in phosphorus, catchment area, toxicity, invertebrate-based biotic index, riparian buffer width, and diatom-based quality index. Breakdown rate was systematically low in high-altitude rivers with few human impacts, but showed a high variability in areas affected by human activity. This increase in variability is the result of the influence of multiple stressors acting simultaneously, as some of these can promote whereas others slow down the breakdown of organic matter. Therefore, stick breakdown gives information on the intensity of a key ecosystem process, which would otherwise be very difficult to predict based on environmental variables.

Assessment of willow (Salix sp.) as a woody heavy metal accumulator: field survey and in vivo X-ray analyses.

Trees that accumulate metals are important plants for restoring contaminated soil because of their high biomass. In our previous study, we discovered that Salix miyabeana has the capability to take up high levels of Cd, and identified the several accumulation sites of the endogenous metals in the leaf parts of plants. To analyze the detailed localization of Cd in apoplastic and symplastic compartments in S. miyabeana, synchrotron radiation-based micro X-ray fluorescence (SR-µ-XRF) analysis and micro X-ray absorption near edge structure (µ-XANES) measurements were performed on beam line 37XU of the SPring-8 (Hyogo, Japan). The two-dimensional metal distribution of segments of young stems was obtained by µ-XRF with approximately 2 µm(2) X-ray beams and showed the predominant localization of Cd in the apoplastic region. µ-XANES analyses suggest that the apoplastic detoxification of Cd in willow depends on Cd-oxygen, but not on Cd-sulfur, interaction. S. miyabeana growing near an old mining site in Japan was then examined to evaluate the metal accumulating ability of this plant in the field. The metal concentration in the leaves of the plants was compared to that in the soil and enrichment factors (EFs) were calculated for Cu, Zn, Cd and Pb. Results showed efficient removal of Cd and Zn from the contaminated sites by the willow plants. In order to discuss the combined and long-term effect of multiple heavy metals on S. miyabeana grown in soil, variable-pressure scanning electron microscopy fitted with energy dispersive X-ray analysis (VPSEM-EDX) and SR-µ-XRF was used to characterize the serration of leaves. The combination of 2D elemental images revealed metal accumulation in the tip cells in serrations without any exudation of heavy metals from the hydathodes.

Assessment of saccharification efficacy in the cellulase system of the brown rot fungus Gloeophyllum trabeum.

Brown rot fungi uniquely degrade wood by creating modifications thought to aid in the selective removal of polysaccharides by an incomplete cellulase suite. This naturally successful mechanism offers potential for current bioprocessing applications. To test the efficacy of brown rot cellulases, southern yellow pine wood blocks were first degraded by the brown rot fungus Gloeophyllum trabeum for 0, 2, 4, and 6 weeks. Characterization of the pine constituents revealed brown rot decay patterns, with selective polysaccharide removal as lignin compositions increased. G. trabeum liquid and solid state cellulase extracts, as well as a commercial Trichoderma reesei extract (Celluclast 1.5 L), were used to saccharify this pretreated material, using beta-glucosidase amendment to remove limitation of cellobiose-to-glucose conversion. Conditions varied according to source and concentration of cellulase extract and to pH (3.0 vs. 4.8). Hydrolysis yields were maximized using solid state G. trabeum extracts at a pH of 4.8. However, the extent of glucose release was low and was not significantly altered when cellulase loading levels were increased threefold. Furthermore, Celluclast 1.5 L continually outperformed G. trabeum cellulase extracts, although extent of glucose release never exceeded 22.0%. Results suggest methodological advances for utilizing crude G. trabeum cellulases and imply that the suboptimal hydrolysis levels obtained with G. trabeum and Celluclast 1.5 L cellulases, even at high loading levels, may be due to brown rot modifications insufficiently distributed throughout the pretreated material.

The carbon budget of Pinus radiata plantations in south-western Australia under four climate change scenarios.

We conducted a comprehensive modelling study to estimate future stem wood production and net ecosystem production (NEP) of Pinus radiata D. Don plantations in south-western Australia, a region that is predicted to undergo severe rainfall reduction in future decades. The process-based model CenW was applied to four locations where it had previously been tested. Climate change scenarios under four emission scenarios for the period from 2005 to 2066 were considered, in addition to simulations under the current climate. Results showed that stem wood production and NEP were little affected by moderate climate change. However, under the most pessimistic climate change scenario (Special Report on Emission Scenarios A2), stem wood production and NEP decreased strongly. These results could be explained by the trade-off between the positive effect of rising atmospheric CO(2) on plant water use efficiency and the negative effects of decreasing rainfall and increasing temperatures. Because changes in heterotrophic respiration (R(H)) lagged behind changes in plant growth, and because R(H) rates were increased by higher temperatures, NEP was more negatively affected than stem wood production. Stem wood production and NEP also strongly interacted with location, with the site currently having the wettest climate being least affected by climatic change. These results suggest that realistic predictions of forest production and carbon sequestration potential in the context of climate change require (1) the use of modelling tools that describe the important feedbacks between environmental variables, plant physiology and soil organic matter decomposition, (2) consideration of a range of climate change scenarios and (3) simulations that account for a gradual climate change to capture transient effects.

A new genomic resource dedicated to wood formation in Eucalyptus.

BACKGROUND: Renowned for their fast growth, valuable wood properties and wide adaptability, Eucalyptus species are amongst the most planted hardwoods in the world, yet they are still at the early stages of domestication because conventional breeding is slow and costly. Thus, there is huge potential for marker-assisted breeding programs to improve traits such as wood properties. To this end, the sequencing, analysis and annotation of a large collection of expressed sequences tags (ESTs) from genes involved in wood formation in Eucalyptus would provide a valuable resource. RESULTS: We report here the normalization and sequencing of a cDNA library from developing Eucalyptus secondary xylem, as well as the construction and sequencing of two subtractive libraries (juvenile versus mature wood and vice versa). A total of 9,222 high quality sequences were collected from about 10,000 cDNA clones. The EST assembly generated a set of 3,857 wood-related unigenes including 2,461 contigs (Cg) and 1,396 singletons (Sg) that we named 'EUCAWOOD'. About 65% of the EUCAWOOD sequences produced matches with poplar, grapevine, Arabidopsis and rice protein sequence databases. BlastX searches of the Uniref100 protein database allowed us to allocate gene ontology (GO) and protein family terms to the EUCAWOOD unigenes. This annotation of the EUCAWOOD set revealed key functional categories involved in xylogenesis. For instance, 422 sequences matched various gene families involved in biosynthesis and assembly of primary and secondary cell walls. Interestingly, 141 sequences were annotated as transcription factors, some of them being orthologs of regulators known to be involved in xylogenesis. The EUCAWOOD dataset was also mined for genomic simple sequence repeat markers, yielding a total of 639 putative microsatellites. Finally, a publicly accessible database was created, supporting multiple queries on the EUCAWOOD dataset. CONCLUSION: In this work, we have identified a large set of wood-related Eucalyptus unigenes called EUCAWOOD, thus creating a valuable resource for functional genomics studies of wood formation and molecular breeding in this economically important genus. This set of publicly available annotated sequences will be instrumental for candidate gene approaches, custom array development and marker-assisted selection programs aimed at improving and modulating wood properties.