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1.
AAPS J ; 25(1): 7, 2022 12 05.
Artigo em Inglês | MEDLINE | ID: mdl-36471200

RESUMO

Currently, regulatory guidelines recommend using 0.01 as the lower limit of plasma fraction unbound (fu) for prediction of drug-drug interactions (DDI) to err on the conservative side. One way to increase experimental fu of highly bound compounds is to dilute the plasma. With the dilution method, a diluted fu, or fu,d, of ≥ 0.01 can be achieved by adjusting the dilution factor. The undiluted fu can be calculated from fu,d and be used for DDI prediction. In this study, the dilution method was evaluated, and the results showed that it gave similar fu values as those determined using the pre-saturation method without plasma dilution. The dilution method enables generation of accurate fu values and alignment with the regulatory recommendation of reportable fu values of ≥ 0.01 for DDI prediction. We recommend using the dilution method to bridge the regulatory recommended fu limit of 0.01 for DDI prediction and the pre-saturation or equivalent methods for definitive plasma protein binding studies. As the pharmaceutical industry continues to generate high quality PPB data, regulatory agencies will gain confidence in the accuracy of fu measurements for highly bound compounds, and the fu lower limit may no longer be needed in the future.


Assuntos
Proteínas Sanguíneas , Plasma , Ligação Proteica , Proteínas Sanguíneas/metabolismo , Interações Medicamentosas , Plasma/metabolismo , Indústria Farmacêutica
2.
Bioanalysis ; 14(24): 1563-1581, 2022 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-36846891

RESUMO

Aim: Protein-bound uremic toxins (PBUTs) may displace drugs from the plasma proteins and render them more liable to clearance. This study aims to investigate the possible interplay between PBUTs and directly acting antivirals (DAAs). Methods: PBUT plasma protein binding was compared to those of paritaprevir (PRT), ombitasivir (OMB) and ritonavir (RTV) in silico to assess the possible competitive displacement. The three drugs were LC-MS/MS determined in seven patients across dialysis and non-dialysis days and results were compared. Results & conclusion: Results showed that the PBUT exhibited a lower binding than DAA reducing the liability of their competitive displacement. This was echoed by an unaltered plasma concentration across dialysis days. Results may indicate that PBUT accumulation may have limited effect on disposition of DAA.


Assuntos
Toxinas Biológicas , Uremia , Humanos , Antivirais , Cromatografia Líquida , Uremia/metabolismo , Espectrometria de Massas em Tandem , Diálise Renal/métodos , Proteínas Sanguíneas/metabolismo , Toxinas Biológicas/metabolismo
3.
Bioanalysis ; 13(14): 1101-1111, 2021 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-34275331

RESUMO

Aim: Determination of plasma protein binding (PPB) is considered vital for better understanding of pharmacokinetic and pharmacodynamic activities of drugs due to the role of free concentration in pharmacological response. Methodology & results: Solid-phase microextraction (SPME) was investigated for measurement of PPB from biological matrices and compared with a gold standard approach (rapid equilibrium dialysis [RED]). Discussion & conclusion: SPME-derived values of PPB correlated well with literature values, and those determined by RED. Respectively, average protein binding across three concentrations by RED and SPME was 33.1 and 31.7% for metoprolol, 89.0 and 86.6% for propranolol and 99.2 and 99.0% for diclofenac. This study generates some evidence for SPME as an alternative platform for the determination of PPB.


Assuntos
Proteínas Sanguíneas/metabolismo , Microextração em Fase Sólida/métodos , Animais , Cromatografia Líquida , Diálise , Diclofenaco/farmacocinética , Diclofenaco/farmacologia , Metoprolol/farmacocinética , Metoprolol/farmacologia , Propranolol/farmacocinética , Propranolol/farmacologia , Ligação Proteica , Ratos , Espectrometria de Massas em Tandem
4.
Cell Rep Med ; 2(6): 100323, 2021 06 15.
Artigo em Inglês | MEDLINE | ID: mdl-34195686

RESUMO

Identification of pregnancies at risk of preterm birth (PTB), the leading cause of newborn deaths, remains challenging given the syndromic nature of the disease. We report a longitudinal multi-omics study coupled with a DREAM challenge to develop predictive models of PTB. The findings indicate that whole-blood gene expression predicts ultrasound-based gestational ages in normal and complicated pregnancies (r = 0.83) and, using data collected before 37 weeks of gestation, also predicts the delivery date in both normal pregnancies (r = 0.86) and those with spontaneous preterm birth (r = 0.75). Based on samples collected before 33 weeks in asymptomatic women, our analysis suggests that expression changes preceding preterm prelabor rupture of the membranes are consistent across time points and cohorts and involve leukocyte-mediated immunity. Models built from plasma proteomic data predict spontaneous preterm delivery with intact membranes with higher accuracy and earlier in pregnancy than transcriptomic models (AUROC = 0.76 versus AUROC = 0.6 at 27-33 weeks of gestation).


Assuntos
Proteínas Sanguíneas/genética , Ácidos Nucleicos Livres/genética , Idade Gestacional , Pré-Eclâmpsia/genética , Nascimento Prematuro/genética , Transcriptoma , Adulto , Doenças Assintomáticas , Biomarcadores/sangue , Proteínas Sanguíneas/classificação , Proteínas Sanguíneas/metabolismo , Ácidos Nucleicos Livres/sangue , Ácidos Nucleicos Livres/classificação , Crowdsourcing/métodos , Feminino , Humanos , Recém-Nascido , Estudos Longitudinais , Pré-Eclâmpsia/sangue , Pré-Eclâmpsia/diagnóstico , Gravidez , Nascimento Prematuro/sangue , Nascimento Prematuro/diagnóstico , Proteômica/métodos , Curva ROC
5.
Biomark Med ; 15(9): 647-657, 2021 06.
Artigo em Inglês | MEDLINE | ID: mdl-34039037

RESUMO

Aim: To investigate the value of galectin-3 in the diagnosis of acute coronary syndrome (ACS) and the assessment of coronary artery lesions. Methodology: This study recruited 157 patients with coronary artery disease where 102 and 55 of them were subsequently grouped as ACS and non-ACS, respectively. The severity of coronary artery lesions was evaluated by Gensini score and the number of vessels involved. Results: Receiver operator characteristics analyses of galectin-3 yielded an area under the curve of 0.679 in diagnosing ACS. The galectin-3 levels were correlated with Gensini score and the number of vessels involved. Conclusion: Our study demonstrated that galectin-3 is an effective auxiliary biomarker for the diagnosis of ACS and assessment of coronary artery lesions.


Assuntos
Síndrome Coronariana Aguda/diagnóstico , Biomarcadores/metabolismo , Proteínas Sanguíneas/metabolismo , Doença da Artéria Coronariana/patologia , Vasos Coronários/patologia , Galectinas/metabolismo , Índice de Gravidade de Doença , Síndrome Coronariana Aguda/metabolismo , Estudos de Casos e Controles , Angiografia Coronária , Doença da Artéria Coronariana/metabolismo , Vasos Coronários/metabolismo , Feminino , Humanos , Masculino , Pessoa de Meia-Idade
6.
Mar Drugs ; 19(3)2021 Feb 24.
Artigo em Inglês | MEDLINE | ID: mdl-33668290

RESUMO

It is widely recognized that chitin and chitosan are potential sources of bioactive materials and that their oligosaccharides reveal various biological activities (including antimicrobial) that are correlated with their structures and physicochemical properties. This study uses the molecular docking approach to assess the interactions of small chito-oligosaccharides (MW< 1500 Da) with plasma proteins in order to obtain information regarding their fate of distribution in the human organism. There are favorable interactions of small chito-oligomers with plasma proteins, the interactions with human serum albumin being stronger than those with α-1-acid glycoprotein. The interaction energies increase with increasing the molecular weight, decrease with increasing deacetylation degrees and are reliant on the deacetylation pattern. This study could inform the application of chito-oligosaccharides with varying molecular weights, degrees, and patterns of deacetylation in human health.


Assuntos
Proteínas Sanguíneas/metabolismo , Quitina/análogos & derivados , Simulação de Acoplamento Molecular , Acetilação , Quitina/química , Quitina/metabolismo , Quitosana , Humanos , Peso Molecular , Oligossacarídeos , Albumina Sérica Humana/metabolismo
7.
Mol Cell Proteomics ; 20: 100021, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-33288685

RESUMO

We have previously shown that multimers of plasma pentraxin-3 (PTX3) were predictive of survival in patients with sepsis. To characterize the release kinetics and cellular source of plasma protein changes in sepsis, serial samples were obtained from healthy volunteers (n = 10; three time points) injected with low-dose endotoxin (lipopolysaccharide [LPS]) and analyzed using data-independent acquisition MS. The human plasma proteome response was compared with an LPS-induced endotoxemia model in mice. Proteomic analysis of human plasma revealed a rapid neutrophil degranulation signature, followed by a rise in acute phase proteins. Changes in circulating PTX3 correlated with increases in neutrophil-derived proteins following LPS injection. Time course analysis of the plasma proteome in mice showed a time-dependent increase in multimeric PTX3, alongside increases in neutrophil-derived myeloperoxidase (MPO) upon LPS treatment. The mechanisms of oxidation-induced multimerization of PTX3 were explored in two genetic mouse models: MPO global knock-out (KO) mice and LysM Cre Nox2 KO mice, in which NADPH oxidase 2 (Nox2) is only deficient in myeloid cells. Nox2 is the enzyme responsible for the oxidative burst in neutrophils. Increases in plasma multimeric PTX3 were not significantly different between wildtype and MPO or LysM Cre Nox2 KO mice. Thus, PTX3 may already be stored and released in a multimeric form. Through in vivo neutrophil depletion and multiplexed vascular proteomics, PTX3 multimer deposition within the aorta was confirmed to be neutrophil dependent. Proteomic analysis of aortas from LPS-injected mice returned PTX3 as the most upregulated protein, where multimeric PTX3 was deposited as early as 2 h post-LPS along with other neutrophil-derived proteins. In conclusion, the rise in multimeric PTX3 upon LPS injection correlates with neutrophil-related protein changes in plasma and aortas. MPO and myeloid Nox2 are not required for the multimerization of PTX3; instead, neutrophil extravasation is responsible for the LPS-induced deposition of multimeric PTX3 in the aorta.


Assuntos
Proteínas Sanguíneas/metabolismo , Endotoxemia/metabolismo , Lipopolissacarídeos/farmacologia , Proteoma/metabolismo , Animais , Humanos , Inflamação/induzido quimicamente , Inflamação/metabolismo , Masculino , Camundongos Knockout , NADPH Oxidase 2/genética , Neutrófilos/metabolismo , Peroxidase/genética , Proteômica
8.
J Pharm Sci ; 110(3): 1385-1391, 2021 03.
Artigo em Inglês | MEDLINE | ID: mdl-33217427

RESUMO

Bteich and coworkers recently demonstrated in a companion manuscript (J Pharm Sci 109: https://doi.org/10.1016/j.xphs.2020.07.003) that a protein-mediated hepatic uptake have occurred in an isolated perfused rat liver (IPRL) model for two drugs (Perampanel; PER and Fluoxetine; FLU) that bind extensively to the albumin (ALB) and alpha-1-acid glycoprotein (AGP). However, to our knowledge, there is no quantitative model available to predict the impact of a plasma protein-mediated hepatic uptake on the extent of hepatic clearance (CLh) for a drug binding extensively to these two proteins. Therefore, the main objective was to predict the corresponding CLh, which is an extension of the companion manuscript. The method consisted of extrapolating the intrinsic clearance from the unbound fraction measured in the perfusate or the unbound fraction extrapolated to the surface of the hepatocyte membrane by adapting an existing model of protein-mediated hepatic uptake (i.e., the fup-adjusted model) to include a binding ratio between the ALB and AGP. This new approach showed a relevant improvement compared to the free drug hypothesis particularly for FLU that showed the highest degree of ALB-mediated uptake. Overall, this study is a first step towards the development of predictive methods of CLh by considering the binding to ALB and AGP.


Assuntos
Orosomucoide , Preparações Farmacêuticas , Albuminas/metabolismo , Animais , Proteínas Sanguíneas/metabolismo , Fígado/metabolismo , Modelos Biológicos , Orosomucoide/metabolismo , Preparações Farmacêuticas/metabolismo , Ligação Proteica , Ratos
9.
Biol Pharm Bull ; 43(12): 1815-1822, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-33268699

RESUMO

Blood transport proteins are biogenic molecules with unique and interesting inherent characteristics that make up living organisms. As the utilization of their inherent characteristics can be a groundbreaking strategy to resolve and improve several clinical problems, attempts have been made to develop pharmaceutical and biomedical preparations based on blood transport proteins for the treatment and diagnosis of disorders. Among various blood transport proteins, we focus on the immense potential of hemoglobin and albumin to serve as carriers of biomedical gases (oxygen and carbon monoxide) and anticancer agents (low-molecular compounds and antisense oligodeoxynucleotides), respectively, for the development of innovative drug delivery systems (DDS) to treat intractable disorders and solid cancers. In this review, I introduce the pharmaceutical technology, strategies, and application of DDS carriers that have been designed on the basis of the structure and function of hemoglobin and albumin. In addition, the prospect of using hemoglobin and albumin as materials for DDS carriers is discussed.


Assuntos
Antineoplásicos/administração & dosagem , Proteínas Sanguíneas/administração & dosagem , Portadores de Fármacos/administração & dosagem , Invenções/tendências , Neoplasias/tratamento farmacológico , Tecnologia Farmacêutica/tendências , Albuminas/administração & dosagem , Albuminas/química , Albuminas/metabolismo , Animais , Antineoplásicos/química , Antineoplásicos/metabolismo , Sítios de Ligação/fisiologia , Proteínas Sanguíneas/química , Proteínas Sanguíneas/metabolismo , Portadores de Fármacos/química , Portadores de Fármacos/metabolismo , Sistemas de Liberação de Medicamentos/métodos , Sistemas de Liberação de Medicamentos/tendências , Hemoglobinas/administração & dosagem , Hemoglobinas/química , Hemoglobinas/metabolismo , Humanos , Neoplasias/metabolismo , Estrutura Secundária de Proteína , Tecnologia Farmacêutica/métodos , Resultado do Tratamento
10.
PLoS One ; 15(8): e0234539, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-32756554

RESUMO

Diabetes Mellitus (DM) accelerates coronary artery disease (CAD) and atherosclerosis, the causes of most heart attacks. The biomolecules involved in these inter-related disease processes are not well understood. This study analyzes biomolecules in the sera of patients with CAD, with and without type (T) 2DM, who are about to undergo coronary artery bypass graft (CABG) surgery. The goal is to develop methodology to help identify and monitor CAD patients with and without T2DM, in order to better understand these phenotypes and to glean relationships through analysis of serum biomolecules. Aorta, fat, muscle, and vein tissues from CAD T2DM patients display diabetic-related histologic changes (e.g., lipid accumulation, fibrosis, loss of cellularity) when compared to non-diabetic CAD patients. The patient discriminatory methodology utilized is serum biomolecule mass profiling. This mass spectrometry (MS) approach is able to distinguish the sera of a group of CAD patients from controls (p value 10-15), with the CAD group containing both T2DM and non-diabetic patients. This result indicates the T2DM phenotype does not interfere appreciably with the CAD determination versus control individuals. Sera from a group of T2DM CAD patients however are distinguishable from non-T2DM CAD patients (p value 10-8), indicating it may be possible to examine the T2DM phenotype within the CAD disease state with this MS methodology. The same serum samples used in the CAD T2DM versus non-T2DM binary group comparison were subjected to MS/MS peptide structure analysis to help identify potential biochemical and phenotypic changes associated with CAD and T2DM. Such peptide/protein identifications could lead to improved understanding of underlying mechanisms, additional biomarkers for discriminating and monitoring these disease conditions, and potential therapeutic targets. Bioinformatics/systems biology analysis of the peptide/protein changes associated with CAD and T2DM suggested cell pathways/systems affected include atherosclerosis, DM, fibrosis, lipogenesis, loss of cellularity (apoptosis), and inflammation.


Assuntos
Doença da Artéria Coronariana/sangue , Doença da Artéria Coronariana/complicações , Diabetes Mellitus Tipo 2/sangue , Diabetes Mellitus Tipo 2/complicações , Angiopatias Diabéticas/sangue , Adulto , Idoso , Biomarcadores/sangue , Proteínas Sanguíneas/metabolismo , Estudos de Casos e Controles , Ponte de Artéria Coronária , Doença da Artéria Coronariana/cirurgia , Estudos Transversais , Angiopatias Diabéticas/cirurgia , Feminino , Humanos , Masculino , Pessoa de Meia-Idade , Fenótipo , Estudos Retrospectivos , Espectrometria de Massas por Ionização por Electrospray , Biologia de Sistemas , Espectrometria de Massas em Tandem
11.
Commun Biol ; 3(1): 339, 2020 07 03.
Artigo em Inglês | MEDLINE | ID: mdl-32620783

RESUMO

The composition of serum proteins is reflecting the current health status and can, with the right tools, be used to detect early signs of disease, such as an emerging cancer. An earlier diagnosis of cancer would greatly increase the chance of an improved outcome for the patients. However, there is still an unmet need for proficient tools to decipher the information in the blood proteome, which calls for further technological development. Here, we present a proof-of-concept study that demonstrates an alternative approach for multiplexed protein profiling of serum samples in solution, using DNA barcoded scFv antibody fragments and next generation sequencing. The outcome shows high accuracy when discriminating samples derived from pancreatic cancer patients and healthy controls and represents a scalable alternative for serum analysis.


Assuntos
Biomarcadores Tumorais/sangue , Proteínas Sanguíneas/metabolismo , Carcinoma Ductal Pancreático/sangue , Neoplasias Pancreáticas/sangue , Proteoma/análise , Anticorpos de Cadeia Única/genética , Anticorpos de Cadeia Única/imunologia , Proteínas Sanguíneas/análise , Proteínas Sanguíneas/imunologia , Carcinoma Ductal Pancreático/patologia , Estudos de Casos e Controles , Biologia Computacional , Sequenciamento de Nucleotídeos em Larga Escala , Humanos , Neoplasias Pancreáticas/patologia , Proteoma/imunologia , Proteoma/metabolismo
12.
Arch Biochem Biophys ; 689: 108476, 2020 08 15.
Artigo em Inglês | MEDLINE | ID: mdl-32585310

RESUMO

BACKGROUND: Proteomics is expected to provide novel insights in the underlying pathophysiology of type 2 diabetes mellitus. In the present study, we aimed to identify and biochemically characterize proteins associated with diabetes mellitus in a Qatari population. METHODS: In a diabetes case-control study (175 cases, 164 controls; Arab, South Asian and Philippine ethnicities), we conducted a discovery study to screen 1141 blood protein levels for associations with diabetes mellitus. Additional analyses were done in controls in relation to Hb1Ac, and biochemical characterization of the main findings was performed with metabolomics (501 metabolites). We performed two-sample Mendelian Randomization to provide evidence of potential causality using data from European descent of the DIAGRAM consortium (74,124 cases of diabetes mellitus and 824,006 controls) for the identified proteins for T2D and Hb1Ac. RESULTS: After accounting for multiple testing, 30 protein levels were different (p-values<8.6e-5) between cases and controls. Of these, a higher Hb1Ac in controls was associated with a lower IGFBP-2 level (p-value = 4.1e-6). IGFBP-2 protein level was found lower among cases compared with controls across all ethnicities. In controls, IGFBP-2 was associated with 21 metabolite levels, but specifically connected to the metabolite citrulline in network analyses. We observed no evidence, however, that the association between IGFBP-2 and diabetes mellitus was causal. CONCLUSIONS: We specifically identified IGFBP-2 to be associated with diabetes mellitus, although with no evidence for causality, which was specifically connected to citrulline metabolism.


Assuntos
Diabetes Mellitus Tipo 2/metabolismo , Proteína 2 de Ligação a Fator de Crescimento Semelhante à Insulina/metabolismo , Adulto , Proteínas Sanguíneas/análise , Proteínas Sanguíneas/metabolismo , Estudos de Casos e Controles , Citrulina/sangue , Citrulina/metabolismo , Diabetes Mellitus Tipo 2/sangue , Feminino , Humanos , Proteína 2 de Ligação a Fator de Crescimento Semelhante à Insulina/sangue , Masculino , Metaboloma , Pessoa de Meia-Idade , Proteoma/análise , Proteoma/metabolismo
13.
J Med Toxicol ; 16(1): 49-60, 2020 01.
Artigo em Inglês | MEDLINE | ID: mdl-31677050

RESUMO

INTRODUCTION: Non-medical use and abuse of prescription opioids is a growing problem in both the civilian and military communities, with minimal technologies for detecting hydrocodone use. This study explored the proteomic changes that occur in the oral fluid and blood plasma following controlled hydrocodone administration in 20 subjects. METHODS: The global proteomic profile was determined for samples taken at four time points per subject: pre-exposure and 4, 6, or 168 hours post-exposure. The oral fluid samples analyzed herein provided greater differentiation between baseline and response time points than was observed with blood plasma, at least partially due to significant person-to-person relative variability in the plasma proteome. RESULTS: A total of 399 proteins were identified from oral fluid samples, and the abundance of 118 of those proteins was determined to be significantly different upon metabolism of hydrocodone (4 and 6 hour time points) as compared to baseline levels in the oral fluid (pre-dose and 168 hours). CONCLUSIONS: We present an assessment of the oral fluid and plasma proteome following hydrocodone administration, which demonstrates the potential of oral fluid as a noninvasive sample that may reveal features of hydrocodone in opioid use, and with additional study, may be useful for other opioids and in settings of misuse.


Assuntos
Analgésicos Opioides/administração & dosagem , Proteínas Sanguíneas/metabolismo , Hidrocodona/administração & dosagem , Transtornos Relacionados ao Uso de Opioides/diagnóstico , Proteoma , Proteômica , Saliva/metabolismo , Detecção do Abuso de Substâncias , Adulto , Cromatografia Líquida de Alta Pressão , Feminino , Humanos , Masculino , Pessoa de Meia-Idade , Transtornos Relacionados ao Uso de Opioides/sangue , Valor Preditivo dos Testes , Extração em Fase Sólida , Espectrometria de Massas por Ionização por Electrospray , Espectrometria de Massas em Tandem , Fatores de Tempo , Adulto Jovem
14.
Drug Metab Dispos ; 48(1): 41-51, 2020 01.
Artigo em Inglês | MEDLINE | ID: mdl-31699808

RESUMO

Atipamezole, an α 2-adrenoceptor antagonist, displayed nonlinear pharmacokinetics (PK) in rats. The aim of this study was to understand the underlying mechanisms of nonlinear PK in rats and linear PK in humans and develop physiologically based PK models (PBPK) to capture and validate this phenomenon. In vitro and in vivo data were generated to show that metabolism is the main clearance pathway of atipamezole and species differences exist. Where cytochrome P450 (P450) was responsible for the metabolism in rats with a low Michaelis constant, human-specific UDP-glucuronosyltransferase 2B10- and 1A4-mediated N-glucuronidation was identified as the leading contributor to metabolism in humans with a high V max capacity. Saturation of metabolism was observed in rats at pharmacologically relevant doses, but not in humans at clinically relevant doses. PBPK models were developed using GastroPlus software to predict the PK profile of atipamezole in rats after intravenous or intramuscular administration of 0.1 to 3 mg/kg doses. The model predicted the nonlinear PK of atipamezole in rats and predicted observed exposures within 2-fold across dose levels. Under the same model structure, a human PBPK model was developed using human in vitro metabolism data. The PBPK model well described human concentration-time profiles at 10-100 mg doses showing dose-proportional increases in exposure. This study demonstrated that PBPK is a useful tool to predict human PK when interspecies extrapolation is not applicable. The nonlinear PK in rat and linear PK in human were characterized in vitro and allowed the prospective human PK via intramuscular dosing to be predicted at the preclinical stage. SIGNIFICANCE STATEMENT: This study demonstrated that PBPK is a useful tool for predicting human PK when interspecies extrapolation is not applicable due to species unique metabolism. Atipamezole, for example, is metabolized by P450 in rats and by N-glucuronidation in humans that were hypothesized to be the underlying reasons for a nonlinear PK in rats and linear PK in humans. This was testified by PBPK simulation in this study.


Assuntos
Antagonistas de Receptores Adrenérgicos alfa 2/farmacocinética , Imidazóis/farmacocinética , Modelos Biológicos , Antagonistas de Receptores Adrenérgicos alfa 2/sangue , Animais , Biotransformação , Proteínas Sanguíneas/metabolismo , Encéfalo/metabolismo , Humanos , Imidazóis/sangue , Técnicas In Vitro , Fígado/enzimologia , Fígado/metabolismo , Microssomos Hepáticos/enzimologia , Microssomos Hepáticos/metabolismo , Ligação Proteica , Ratos , Especificidade da Espécie , Distribuição Tecidual
15.
Trials ; 20(1): 585, 2019 Oct 11.
Artigo em Inglês | MEDLINE | ID: mdl-31604481

RESUMO

BACKGROUND: Nutritional support is essential in the care of critically ill children since malnutrition in this population is associated with increased morbidity and mortality. Injury in patients admitted to pediatric intensive care units (PICU) results in a catabolic state and augmented protein breakdown, leading to a negative protein balance. Current recommendations about protein prescription in the PICU are fundamentally based on expert opinions, and the minimum threshold is 1.5 g/kg per day of protein, although protein needs could be higher in certain subgroups of patients. The main objectives of the present study are to examine whether the administration of a protein-enriched infant formula increases the serum levels of total proteins, albumin, prealbumin, transferrin, and retinol and improves nitrogen balance and to analyze the effect of the high-protein diet on energy expenditure. A secondary objective is to register possible secondary effects of the protein-enriched diet. METHODS: A multicenter prospective randomized controlled trial (RCT) will be performed in three hospitals. Patients meeting inclusion criteria will be randomly allocated to one of three enteral feeding formulae with different protein contents. Blood and urine test, nitrogen balance assessment, and energy expenditure testing by indirect calorimetry will be performed at the beginning of the nutrition regimen and at 24 h, 72 h and 5-7 days after initiation. The sample size for this trial is estimated to be 90 participants (about 30 participants in each group). The data analysis will be by intention to treat. DISCUSSION: This RCT will provide new data about the amount of protein needed to improve levels of serum protein and nitrogen balance, a surrogate of protein balance, in critically ill infants receiving enteral nutrition. TRIAL REGISTRATION: ClinicalTrials.gov identifier: NCT03901742 . Registered April 1, 2019 - Retrospectively registered.


Assuntos
Proteínas Sanguíneas/metabolismo , Alimentação com Mamadeira , Estado Terminal/terapia , Dieta Rica em Proteínas , Metabolismo Energético , Nutrição Enteral , Fórmulas Infantis , Fenômenos Fisiológicos da Nutrição do Lactente , Nitrogênio/metabolismo , Pré-Escolar , Ingestão de Energia , Feminino , Humanos , Lactente , Masculino , Estudos Multicêntricos como Assunto , Estado Nutricional , Valor Nutritivo , Estudos Prospectivos , Ensaios Clínicos Controlados Aleatórios como Assunto , Recomendações Nutricionais , Espanha , Fatores de Tempo , Resultado do Tratamento
16.
Anal Biochem ; 584: 113388, 2019 11 01.
Artigo em Inglês | MEDLINE | ID: mdl-31404526

RESUMO

In this study, the efficiency of one commercial (ProteoMiner™ -PM) and five simple and cost-effective laboratory chemicals (Acetone, TCA/acetone, DTT, ACN and DTT-ACN) based serum protein pre-fractionation strategies was compared in pig model by label-free quantitation based mass spectrometric approach to find out the most suitable strategy for reducing the complexity of serum proteome for subsequent proteomic studies. The highest serum protein depletion percentage and highest depletion of albumin, the most abundant serum protein, was observed in DTT-ACN method. The maximum number of serum proteins was identified in ACN followed by DTT-ACN method and importantly, detection of more number of low-abundant proteins (LAPs) could also be achieved by these two methods. Although PM method resulted into lowest dynamic range of protein abundance, quite a less number of proteins were identified by this method. Overall, sequential depletion using DTT-ACN and ACN methods provided advantage of simultaneous detection of more number of proteins along with LAPs with a reasonably high dynamic range of protein abundances over other methods and thus emerged as cheaper and effective alternatives to the commercial methods. Further, these methods are species-independent and hence can be applied in human and in any livestock species to simplify the serum proteome.


Assuntos
Proteínas Sanguíneas/isolamento & purificação , Proteínas Sanguíneas/metabolismo , Fracionamento Químico/métodos , Análise Custo-Benefício , Proteômica/economia , Animais , Humanos , Suínos
17.
Sci Rep ; 9(1): 8860, 2019 06 20.
Artigo em Inglês | MEDLINE | ID: mdl-31222081

RESUMO

Recently, the concerns about micro- and nano-plastics (NPs) toxicity have been increasing constantly, however the investigations are quiet meager. The present study provides evidences on the toxicological prospectives of virgin-, coronated- and isolated-NPs on human blood cells and Allium cepa root tip, respectively. Several plasma proteins displayed strong affinity towards NPs and produced multi-layered corona of 13 nm to 600 nm size. The coronated-NPs often attracted each other via non-specific protein-protein attraction which subsequently induced protein-induced coalescence in NPs. In the protein point of view, the interaction caused conformational changes and denaturation of protein thereby turned it as bio-incompatible. The coronated-NPs with increased protein confirmation changes caused higher genotoxic and cytotoxic effect in human blood cells than the virgin-NPs. On the other hand, virgin-NPs and the NPs isolated from facial scrubs hindered the root growth and caused chromosome aberration (ring formation, C-mitotic and chromosomal breaks, etc.) in root of Allium cepa. At the outset, the present study highlights the urgent need of scrutinization and regulation of NPs use in medical applications and pre-requisition of additional studies for assessing the bio-accumulation and bio-magnification of NPs.


Assuntos
Bioacumulação , Proteínas Sanguíneas/metabolismo , Mutagênicos/toxicidade , Nanopartículas/toxicidade , Plásticos/toxicidade , Adulto , Aberrações Cromossômicas , Dano ao DNA , Eritrócitos/efeitos dos fármacos , Humanos , Linfócitos/efeitos dos fármacos , Masculino , Meristema/efeitos dos fármacos , Cebolas/efeitos dos fármacos , Estudos Prospectivos , Ligação Proteica
18.
Arch Toxicol ; 93(2): 311-330, 2019 02.
Artigo em Inglês | MEDLINE | ID: mdl-30483840

RESUMO

Perfluorononanoic acid (PFNA) and perfluorodecanoic acid (PFDA), which are classified as perfluoroalkyl and polyfluoroalkyl substances (PFASs), have been widely used in industrial applications as a surface protectant. PFASs have been detected in wildlife and in humans around the globe. The purposes of this study are to develop and validate a physiologically based pharmacokinetic (PBPK) model for detecting PFNA and PFDA in male and female rats, and to apply the model to a human health risk assessment regarding the sex difference. A PBPK model of PFNA and PFDA was established based on an in vivo study in male and female rats. Analytes in biological samples (plasma, nine tissues, urine, and feces) were determined by ultra-liquid chromatography coupled tandem mass spectrometry (UPLC-MS/MS) method. PFNA and PFDA showed a gender differences in the elimination half-life and volume of distribution. The tissue-plasma partition coefficients were the highest in the liver in both male and female rats. The predicted rat plasma and urine concentrations simulated and fitted were in good agreement with the observed values. The PBPK models of PFNA and PFDA in male and female rats were then extrapolated to a human PBPK model based on human physiological parameters. The external doses were calculated at 3.35 ng/kg/day (male) and 17.0 ng/kg/day (female) for PFNA and 0.530 ng/kg/day (male) and 0.661 ng/kg/day (female) for PFDA. Human risk assessment was estimated using Korean biomonitoring values considering the gender differences. This study provides valuable insight into human health risk assessment regarding PFNA and PFDA exposure.


Assuntos
Ácidos Decanoicos/farmacocinética , Ácidos Decanoicos/toxicidade , Fluorocarbonos/farmacocinética , Fluorocarbonos/toxicidade , Animais , Proteínas Sanguíneas/metabolismo , Poluentes Ambientais/toxicidade , Ácidos Graxos , Feminino , Humanos , Masculino , Modelos Biológicos , Ratos Sprague-Dawley , Reprodutibilidade dos Testes , Medição de Risco , Fatores Sexuais
19.
Pharm Res ; 36(2): 28, 2018 Dec 27.
Artigo em Inglês | MEDLINE | ID: mdl-30591975

RESUMO

PURPOSE: This study explored several strategies to improve the performance of literature QSAR models for plasma protein binding (PPB), such as a suitable endpoint transformation, a correct representation of chemicals, more consistency in the dataset, and a reliable definition of the applicability domain. METHODS: We retrieved human fraction unbound (Fu) data for 670 compounds from the literature and carefully checked them for consistency. Descriptors were calculated taking account of the ionization state of molecules at physiological pH (7.4), in order to better estimate the affinity of molecules to blood proteins. We used different algorithms and chemical descriptors to explore the most suitable strategy for modeling the endpoint. SMILES (simplified molecular input line entry system)-based string descriptors were also tested with the CORAL software (CORelation And Logic). We did an outlier analysis to establish the models to use (or not to use) in case of well recognized families. RESULTS: Internal validation of the selected models returned Q2 values close to 0.60. External validation also gave r2 values always greater than 0.60. The CORAL descriptor based model for √fu was the best, with r2 0.74 in external validation. CONCLUSIONS: Performance in prediction confirmed the robustness of all the derived models and their suitability for real-life purposes, i.e. screening chemicals for their ADMET profiling. Optimization of descriptors can be useful in order to obtain the correct results with a ionized molecule.


Assuntos
Proteínas Sanguíneas/química , Proteínas Sanguíneas/metabolismo , Modelos Biológicos , Modelos Químicos , Algoritmos , Humanos , Concentração de Íons de Hidrogênio , Íons/sangue , Íons/química , Modelos Moleculares , Método de Monte Carlo , Ligação Proteica , Relação Quantitativa Estrutura-Atividade , Reprodutibilidade dos Testes
20.
Anal Bioanal Chem ; 410(27): 7211-7220, 2018 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-30155703

RESUMO

Quantitative screening for potential drug-protein binding is an essential step in developing novel metal-based anticancer drugs. ICP-MS approaches are at the core of this task; however, many applications lack in the capability of large-scale high-throughput screenings and proper validation. In this work, we critically discuss the analytical figures of merit and the potential method-based quantitative differences applying four different ICP-MS strategies to ex vivo drug-serum incubations. Two candidate drugs, more specifically, two Pt(IV) complexes with known differences of binding affinity towards serum proteins were selected. The study integrated centrifugal ultrafiltration followed by flow injection analysis, turbulent flow chromatography (TFC), and size exclusion chromatography (SEC), all combined with inductively coupled plasma-mass spectrometry (ICP-MS). As a novelty, for the first time, UHPLC SEC-ICP-MS was implemented to enable rapid protein separation to be performed within a few minutes at > 90% column recovery for protein adducts and small molecules. Graphical abstract Quantitative screening for potential drug-protein binding is an essential step in developingnovel metal-based anticancer drugs.


Assuntos
Antineoplásicos/metabolismo , Proteínas Sanguíneas/metabolismo , Compostos Organoplatínicos/metabolismo , Antineoplásicos/análise , Proteínas Sanguíneas/análise , Cromatografia em Gel/métodos , Cromatografia Líquida de Alta Pressão/métodos , Análise de Injeção de Fluxo/métodos , Humanos , Espectrometria de Massas/métodos , Metais/análise , Metais/metabolismo , Compostos Organoplatínicos/análise , Ligação Proteica , Ultrafiltração/métodos
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