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1.
Sci Rep ; 11(1): 15956, 2021 08 05.
Artigo em Inglês | MEDLINE | ID: mdl-34354186

RESUMO

The soybean technology MON 87701 × MON 89788, expressing Cry1Ac and conferring tolerance to glyphosate, has been widely adopted in Brazil since 2013. However, pest shifts or resistance evolution could reduce the benefits of this technology. To assess Cry1Ac soybean performance and understand the composition of lepidopteran pest species attacking soybeans, we implemented large-scale sampling of larvae on commercial soybean fields during the 2019 and 2020 crop seasons to compare with data collected prior to the introduction of Cry1Ac soybeans. Chrysodeixis includens was the main lepidopteran pest in non-Bt fields. More than 98% of larvae found in Cry1Ac soybean were Spodoptera spp., although the numbers of Spodoptera were similar between Cry1Ac soybean and non-Bt fields. Cry1Ac soybean provided a high level of protection against Anticarsia gemmatalis, C. includens, Chloridea virescens and Helicoverpa spp. Significant reductions in insecticide sprays for lepidopteran control in soybean were observed from 2012 to 2019. Our study showed that C. includens and A. gemmatalis continue to be primary lepidopteran pests of soybean in Brazil and that Cry1Ac soybean continues to effectively manage the target lepidopteran pests. However, there was an increase in the relative abundance of non-target Spodoptera spp. larvae in both non-Bt and Cry1Ac soybeans.


Assuntos
Glycine max/genética , Lepidópteros/genética , Controle Biológico de Vetores/métodos , Animais , Toxinas de Bacillus thuringiensis/genética , Proteínas de Bactérias/genética , Brasil , Endotoxinas/metabolismo , Proteínas Hemolisinas/genética , Proteínas de Insetos/genética , Proteínas de Insetos/metabolismo , Inseticidas , Larva/efeitos dos fármacos , Lepidópteros/patogenicidade , Mariposas/efeitos dos fármacos , Plantas Geneticamente Modificadas/genética , Receptores de Superfície Celular/genética , Receptores de Superfície Celular/metabolismo
2.
J Chem Phys ; 154(5): 055101, 2021 Feb 07.
Artigo em Inglês | MEDLINE | ID: mdl-33557556

RESUMO

Binding of cell surface receptors with their extracellular ligands initiates various intracellular signaling pathways. However, our understanding of the cellular functions of these receptors is very limited due to the fact that in vivo binding between ligands and receptors has only been successfully measured in a very small number of cases. In living cells, receptors are anchored on surfaces of the plasma membrane, which undergoes thermal undulations. Moreover, it has been observed in various systems that receptors can be organized into oligomers prior to ligand binding. It is not well understood how these cellular factors play roles in regulating the dynamics of ligand-receptor interactions. Here, we tackled these problems by using a coarse-grained kinetic Monte Carlo simulation method. Using this method, we demonstrated that the membrane undulations cause a negative effect on ligand-receptor interactions. We further found that the preassembly of membrane receptors on the cell surface can not only accelerate the kinetics of ligand binding but also reduce the noises during the process. In general, our study highlights the importance of membrane environments in regulating the function of membrane receptors in cells. The simulation method can be potentially applied to specific receptor systems involved in cell signaling.


Assuntos
Simulação por Computador , Receptores de Superfície Celular/metabolismo , Membrana Celular/metabolismo , Ligantes , Método de Monte Carlo
3.
Int J Mol Sci ; 22(4)2021 Feb 10.
Artigo em Inglês | MEDLINE | ID: mdl-33578942

RESUMO

The physiological function of free fatty acids (FFAs) has long been regarded as indirect in terms of their activities as educts and products in metabolic pathways. The observation that FFAs can also act as signaling molecules at FFA receptors (FFARs), a family of G protein-coupled receptors (GPCRs), has changed the understanding of the interplay of metabolites and host responses. Free fatty acids of different chain lengths and saturation statuses activate FFARs as endogenous agonists via binding at the orthosteric receptor site. After FFAR deorphanization, researchers from the pharmaceutical industry as well as academia have identified several ligands targeting allosteric sites of FFARs with the aim of developing drugs to treat various diseases such as metabolic, (auto)inflammatory, infectious, endocrinological, cardiovascular, and renal disorders. GPCRs are the largest group of transmembrane proteins and constitute the most successful drug targets in medical history. To leverage the rich biology of this target class, the drug industry seeks alternative approaches to address GPCR signaling. Allosteric GPCR ligands are recognized as attractive modalities because of their auspicious pharmacological profiles compared to orthosteric ligands. While the majority of marketed GPCR drugs interact exclusively with the orthosteric binding site, allosteric mechanisms in GPCR biology stay medically underexploited, with only several allosteric ligands currently approved. This review summarizes the current knowledge on the biology of FFAR1 (GPR40), FFAR2 (GPR43), FFAR3 (GPR41), FFAR4 (GPR120), and GPR84, including structural aspects of FFAR1, and discusses the molecular pharmacology of FFAR allosteric ligands as well as the opportunities and challenges in research from the perspective of drug discovery.


Assuntos
Regulação Alostérica/efeitos dos fármacos , Descoberta de Drogas , Receptores Acoplados a Proteínas G/agonistas , Receptores Acoplados a Proteínas G/antagonistas & inibidores , Bibliotecas de Moléculas Pequenas/farmacologia , Animais , Descoberta de Drogas/métodos , Humanos , Ligantes , Modelos Moleculares , Receptores de Superfície Celular/agonistas , Receptores de Superfície Celular/antagonistas & inibidores , Receptores de Superfície Celular/metabolismo , Receptores Acoplados a Proteínas G/metabolismo , Bibliotecas de Moléculas Pequenas/química
4.
Hepatol Commun ; 5(1): 52-62, 2021 01.
Artigo em Inglês | MEDLINE | ID: mdl-33437900

RESUMO

Adenosine triphosphatase phospholipid transporting 8B1 (ATP8B1) deficiency, an ultrarare autosomal recessive liver disease, includes severe and mild clinical forms, referred to as progressive familial intrahepatic cholestasis type 1 (PFIC1) and benign recurrent intrahepatic cholestasis type 1 (BRIC1), respectively. There is currently no practical method for determining PFIC1 or BRIC1 at an early disease course phase. Herein, we assessed the feasibility of developing a diagnostic method for PFIC1 and BRIC1. A nationwide Japanese survey conducted since 2015 identified 25 patients with cholestasis with ATP8B1 mutations, 15 of whom agreed to participate in the study. Patients were divided for analysis into PFIC1 (n = 10) or BRIC1 (n = 5) based on their disease course. An in vitro mutagenesis assay to evaluate pathogenicity of ATP8B1 mutations suggested that residual ATP8B1 function in the patients could be used to identify clinical course. To assess their ATP8B1 function more simply, human peripheral blood monocyte-derived macrophages (HMDMs) were prepared from each patient and elicited into a subset of alternatively activated macrophages (M2c) by interleukin-10 (IL-10). This was based on our previous finding that ATP8B1 contributes to polarization of HMDMs into M2c. Flow cytometric analysis showed that expression of M2c-related surface markers cluster of differentiation (CD)14 and CD163 were 2.3-fold and 2.1-fold lower (95% confidence interval, 2.0-2.5 for CD14 and 1.7-2.4 for CD163), respectively, in patients with IL-10-treated HMDMs from PFIC1 compared with BRIC1. Conclusion: CD14 and CD163 expression levels in IL-10-treated HMDMs may facilitate diagnosis of PFIC1 or BRIC1 in patients with ATP8B1 deficiency.


Assuntos
Adenosina Trifosfatases/deficiência , Antígenos CD/metabolismo , Antígenos de Diferenciação Mielomonocítica/metabolismo , Colestase/metabolismo , Receptores de Lipopolissacarídeos/metabolismo , Macrófagos/metabolismo , Receptores de Superfície Celular/metabolismo , Adenosina Trifosfatases/metabolismo , Adolescente , Adulto , Criança , Pré-Escolar , Colestase/diagnóstico , Colestase/patologia , Feminino , Humanos , Interleucina-10/farmacologia , Fígado/metabolismo , Fígado/patologia , Macrófagos/patologia , Masculino , Mutagênese/genética , Mutação , Adulto Jovem
5.
Phys Rev Lett ; 126(2): 028002, 2021 Jan 15.
Artigo em Inglês | MEDLINE | ID: mdl-33512214

RESUMO

Motivated by the fine compositional control observed in membraneless droplet organelles in cells, we investigate how a sharp binding-unbinding transition can occur between multivalent client molecules and receptors embedded in a porous three-dimensional structure. In contrast to similar superselective binding previously observed at surfaces, we have identified that a key effect in a three-dimensional environment is that the presence of inert crowding agents can significantly enhance or even introduce superselectivity. In essence, molecular crowding initially suppresses binding via an entropic penalty, but the clients can then more easily form many bonds simultaneously. We demonstrate the robustness of the superselective behavior with respect to client valency, linker length, and binding interactions in Monte Carlo simulations of an archetypal lattice polymer model.


Assuntos
Modelos Biológicos , Proteínas/química , RNA/química , Método de Monte Carlo , Organelas/química , Organelas/metabolismo , Ligação Proteica , Proteínas/metabolismo , RNA/metabolismo , Receptores de Superfície Celular/química , Receptores de Superfície Celular/metabolismo
6.
Breast ; 53: 44-50, 2020 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-32623094

RESUMO

Metastatic breast cancer (MBC) diagnosis in young women negatively impacts on quality of life (QoL) and daily activities, disrupting their life project and forcing them to face new psychosocial challenges. The recently published results on the improvement of the overall survival of pre- or perimenopausal women with hormone-receptor-positive, HER2-negative MBC treated with CDK4/6 inhibitors plus endocrine therapy, while preserving, and in some items improving their QoL, will change the landscape of the management of this patient population. Their extended survival and potential improvement in QoL will, therefore, modify their specific needs in terms of psychosocial support. The complexity of the care of young women with MBC is described herein, based on an extensive literature review. Further research about the specific psychosocial requirements of these women and a new multidisciplinary holistic approach is paramount to properly address their concerns and preferences. The communication with and support of their partners, parents and children is an important factor affecting the QoL of these patients. Altogether, a multidisciplinary care, open communication and personalized support is required to address the psychosocial implications of the new prognostic expectations on these patients with the incorporation of new targeted therapies.


Assuntos
Neoplasias da Mama/psicologia , Reabilitação Psiquiátrica/métodos , Psico-Oncologia/métodos , Qualidade de Vida/psicologia , Adulto , Antineoplásicos Hormonais/uso terapêutico , Neoplasias da Mama/metabolismo , Neoplasias da Mama/patologia , Efeitos Psicossociais da Doença , Família/psicologia , Feminino , Saúde Holística , Humanos , Pessoa de Meia-Idade , Metástase Neoplásica , Equipe de Assistência ao Paciente , Pré-Menopausa/psicologia , Prognóstico , Receptores de Superfície Celular/metabolismo , Apoio Social , Adulto Jovem
7.
J Egypt Natl Canc Inst ; 32(1): 6, 2020 Jan 27.
Artigo em Inglês | MEDLINE | ID: mdl-32372332

RESUMO

BACKGROUND: Tumor-associated macrophages (TAMs) are important in regulating cross-talk between tumor cells and tumor microenvironment. TAMs are involved in multiple steps of tumor progression and invasion. This study aimed to compare CD163 expression with the widely used CD68 pan-macrophage marker in invasive breast carcinoma. Furthermore, it focused on assessing the significance of TAMs localization in relation to clinicopathological parameters. RESULTS: CD68 and CD163 immunohistochemical expressions within TAMs infiltrating both tumor nest (TN) and tumor stroma (TS) were evaluated in 60 specimens with invasive breast carcinoma. High CD68-positive stromal TAMs was significantly related to larger tumor, nodal metastasis and vascular invasion (p = 0.003, 0.037, 0.032, respectively), whereas high CD163-positive stromal TAMs was significantly related to larger tumors, nodal metastasis, stage III tumors, vascular invasion, estrogen receptor (ER) negativity, and triple-negative subtype (p = 0.023, < 0.001, 0.001, 0.022, 0.002, 0.017, respectively). On multivariate analysis, high CD68-positive TAMs infiltrating TS was significantly associated with larger tumor and positive nodal metastasis (p = 0.006 and 0.016, respectively), whereas high CD163 TAMs density within TS was significantly associated with positive vascular invasion, nodal metastasis, and molecular subtypes (p = 0.003, 0.001, and 0.009, respectively). CONCLUSION: TAMs within tumor stroma and tumor nest have different levels of association with poor prognostic parameters. So, it is of great importance to consider the histologic localization of TAMs in addition to the degree of TAMs infiltration.


Assuntos
Neoplasias da Mama/diagnóstico , Mama/citologia , Carcinoma Ductal de Mama/patologia , Microambiente Tumoral , Macrófagos Associados a Tumor/patologia , Adulto , Antígenos CD/análise , Antígenos CD/metabolismo , Antígenos de Diferenciação Mielomonocítica/análise , Antígenos de Diferenciação Mielomonocítica/metabolismo , Biomarcadores Tumorais/análise , Biomarcadores Tumorais/metabolismo , Mama/patologia , Neoplasias da Mama/patologia , Carcinoma Ductal de Mama/mortalidade , Progressão da Doença , Feminino , Humanos , Pessoa de Meia-Idade , Gradação de Tumores , Invasividade Neoplásica , Estadiamento de Neoplasias , Prognóstico , Receptores de Superfície Celular/análise , Receptores de Superfície Celular/metabolismo , Estudos Retrospectivos , Macrófagos Associados a Tumor/metabolismo
8.
Auris Nasus Larynx ; 47(4): 658-667, 2020 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-32089351

RESUMO

OBJECTIVE: Cancer cells secrete large amounts of lactic acid via aerobic glycolysis. We have shown that lactic acid plays an important role as a proinflammatory and immunosuppressive mediator and promotes tumor progression. Fluorine-18 fluorodeoxyglucose (FDG) uptake detected by positron emission tomography/computed tomography (PET/CT) is considered as a good indicator of aerobic glycolysis in cancer. In this study, we examined the relationships between systemic inflammatory parameters and FDG-PET/CT parameters in advanced head and neck squamous cell carcinoma (HNSCC). Furthermore, we investigated the relationships between FDG-PET/CT parameters and M2-macrophage polarization in HNSCC by assessing the ratio of CD163, a M2-macrophage marker, to CD68, a pan-macrophage marker. METHODS: This study included 73 advanced HNSCC patients. We assessed the C-reactive protein (CRP) level, white blood cell (WBC) count, neutrophil count, lymphocyte count, and monocyte count as systemic inflammatory markers. Additionally, we assessed the maximum standardized uptake value (SUVmax), mean SUV (SUVmean), metabolic tumor volume (MTV), and total lesion glycolysis (TLG) as FDG-PET/CT parameters. RESULTS: The CRP level, WBC count, and neutrophil count were correlated with whole-body FDG-PET/CT parameters. The CD163/CD68 ratio was correlated with SUVmax and SUVmean. Our results suggest that systemic inflammation, which is associated with neutrophils, develops in patients with HNSCC having tumors with a larger volume and increased glucose uptake and that M2-macrophage polarization is promoted in HNSCC with increased glucose uptake, SUVmax, and SUVmean. FDG-PET/CT has the potential to reflect cancer-related chronic inflammation and immunosuppressive conditions in cancer patients. CONCLUSIONS: FDG-PET/CT parameters appear to be useful in assessing the immune status in HNSCC.


Assuntos
Proteína C-Reativa/metabolismo , Neoplasias de Cabeça e Pescoço/diagnóstico por imagem , Inflamação/sangue , Macrófagos/metabolismo , Carcinoma de Células Escamosas de Cabeça e Pescoço/diagnóstico por imagem , Idoso , Idoso de 80 Anos ou mais , Antígenos CD/metabolismo , Antígenos de Diferenciação Mielomonocítica/metabolismo , Feminino , Fluordesoxiglucose F18 , Glicólise , Neoplasias de Cabeça e Pescoço/sangue , Neoplasias de Cabeça e Pescoço/metabolismo , Neoplasias de Cabeça e Pescoço/patologia , Humanos , Inflamação/metabolismo , Ácido Láctico/metabolismo , Contagem de Leucócitos , Contagem de Linfócitos , Masculino , Pessoa de Meia-Idade , Monócitos , Neutrófilos , Tomografia por Emissão de Pósitrons combinada à Tomografia Computadorizada , Compostos Radiofarmacêuticos , Receptores de Superfície Celular/metabolismo , Carcinoma de Células Escamosas de Cabeça e Pescoço/sangue , Carcinoma de Células Escamosas de Cabeça e Pescoço/metabolismo , Carcinoma de Células Escamosas de Cabeça e Pescoço/patologia
9.
Soft Matter ; 15(17): 3507-3514, 2019 Apr 24.
Artigo em Inglês | MEDLINE | ID: mdl-30912540

RESUMO

Cell adhesion is crucial for immune response, tissue formation, and cell locomotion. The adhesion process is mediated by the specific binding of membrane-anchored receptor and ligand proteins. These adhesion proteins are in contact with the membranes and may generate curvature, which has been shown for a number of membrane proteins to play an important role in membrane remodeling. An important question remains of whether the local membrane curvatures induced by the adhesion proteins affect their binding. We've performed Monte Carlo simulations of a mesoscopic model for membrane adhesion via the specific binding of curvature-inducing receptors and ligands. We find that the curvatures induced by the adhesion proteins do affect their binding equilibrium constant. We presented a theory that takes into account the membrane deformations and protein-protein interactions due to the induced curvatures, and agrees quantitatively with our simulation results. Our study suggests that the ability to induce membrane curvatures represents a molecular property of the adhesion proteins and should be carefully considered in experimental characterization of the binding affinity.


Assuntos
Membrana Celular/metabolismo , Método de Monte Carlo , Receptores de Superfície Celular/metabolismo , Adesão Celular , Ligantes , Ligação Proteica
10.
IEEE Trans Nanobioscience ; 18(1): 84-92, 2019 01.
Artigo em Inglês | MEDLINE | ID: mdl-30624222

RESUMO

In this paper, a diffusion-based molecular communication channel is modeled in presence of a probabilistic absorber. The probabilistic absorber is an absorber which absorbs molecules upon collision with probability q . With random walk analysis, the discrete probability function of particle location in the presence of a probabilistic absorber can be found. Then, a continuous probability function is fitted to this Markov-based results with introducing several fitting parameters to the known probability function of particle location in an unbounded environment without an absorbing barrier. With this approach, a single receptor is modeled as an M/M/1/1 queue in which q represents the complementary blocking probability and the mean service time is the mean trafficking time. Therefore, we are able to model the stochastic nature of ligand-receptor binding, which comes from the incapability of a receptor to receive all molecules in its space; and also known as receptor occupancy. The proper consideration of the absorption effect leads to the accurate calculation of the concentration at the desired site, which is definitely less than the concentration obtained when neglecting it. These findings can have a crucial role in designing drug delivery systems in which determining the optimal rate of the drug transmitting nanomachines is critical to avoid toxicity while maintaining effectiveness.


Assuntos
Computadores Moleculares , Modelos Biológicos , Modelos Moleculares , Receptores de Superfície Celular , Algoritmos , Comunicação , Difusão , Ligantes , Cadeias de Markov , Ligação Proteica , Receptores de Superfície Celular/química , Receptores de Superfície Celular/metabolismo
11.
Bull Math Biol ; 81(3): 800-829, 2019 03.
Artigo em Inglês | MEDLINE | ID: mdl-30523505

RESUMO

Biochemical reactions are often subject to a complex fluctuating environment, which means that the corresponding reaction rates may themselves be time-varying and stochastic. If the environmental noise is common to a population of downstream processes, then the resulting rate fluctuations will induce statistical correlations between them. In this paper we investigate how such correlations depend on the form of environmental noise by considering a simple birth-death process with dynamical disorder in the birth rate. In particular, we derive expressions for the second-order statistics of two birth-death processes evolving in the same noisy environment. We find that these statistics not only depend on the second-order statistics of the environment, but the full generator of the process describing it, thus providing useful information about the environment. We illustrate our theory by considering applications to stochastic gene transcription and cell sensing.


Assuntos
Modelos Biológicos , Fenômenos Bioquímicos , Fenômenos Fisiológicos Celulares , Redes Reguladoras de Genes , Ligantes , Cadeias de Markov , Conceitos Matemáticos , Método de Monte Carlo , Receptores de Superfície Celular/metabolismo , Transdução de Sinais , Processos Estocásticos , Biologia de Sistemas
12.
Phys Rev E ; 97(1-1): 012405, 2018 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-29448355

RESUMO

Cell-cell adhesion and the adhesion of cells to tissues and extracellular matrix, which are pivotal for immune response, tissue development, and cell locomotion, depend sensitively on the binding constant of receptor and ligand molecules anchored on the apposing surfaces. An important question remains of whether the immobilization of ligands affects the affinity of binding with cell adhesion receptors. We have investigated the adhesion of multicomponent membranes to a flat substrate coated with immobile ligands using Monte Carlo simulations of a statistical mesoscopic model with biologically relevant parameters. We find that the binding of the adhesion receptors to ligands immobilized on the substrate is strongly affected by the ligand distribution. In the case of ligand clusters, the receptor-ligand binding constant can be significantly enhanced due to the less translational entropy loss of lipid-raft domains in the model cell membranes upon the formation of additional complexes. For ligands randomly or uniformly immobilized on the substrate, the binding constant is rather decreased since the receptors localized in lipid-raft domains have to pay an energetic penalty in order to bind ligands. Our findings help to understand why cell-substrate adhesion experiments for measuring the impact of lipid rafts on the receptor-ligand interactions led to contradictory results.


Assuntos
Adesão Celular/fisiologia , Ligantes , Microdomínios da Membrana/metabolismo , Modelos Biológicos , Receptores de Superfície Celular/metabolismo , Simulação por Computador , Elasticidade , Entropia , Método de Monte Carlo
13.
J Insect Physiol ; 106(Pt 1): 65-70, 2018 04.
Artigo em Inglês | MEDLINE | ID: mdl-28935437

RESUMO

Honeybees (Apis mellifera) are well-known for their sophisticated division of labor with each bee performing sequentially a series of social tasks. Colony organization is largely based on age-dependent division of labor. While bees perform several tasks inside the hive such as caring for brood ("nursing"), cleaning or sealing brood cells or producing honey, older bees leave to colony to collect pollen (proteins) and nectar (carbohydrates) as foragers. The most pronounced behavioral transition occurs when nurse bees become foragers. For both social roles, the detection and evaluation of sugars is decisive for optimal task performance. Nurse bees rely on their gustatory senses to prepare brood food, while foragers evaluate a nectar source before starting to collect food from it. To test whether social organization is related to differential sensing of sugars we compared the taste of nurse bees and foragers for different sugars. Searching for molecular correlates for differences in sugar perception, we further quantified expression of gustatory receptor genes in both behavioral groups. Our results demonstrate that nurse bees and foragers perceive and evaluate different sugars differently. Both groups, however, prefer sucrose over fructose. At least part of the taste differences between social roles could be related to a differential expression of taste receptors in the antennae and brain. Our results suggest that differential expression of sugar receptor genes might be involved in regulating division of labor through nutrition-related signaling pathways.


Assuntos
Abelhas/fisiologia , Comportamento Animal , Proteínas de Insetos/metabolismo , Receptores de Superfície Celular/metabolismo , Percepção Gustatória , Animais , Feminino , Frutose , Proteínas de Insetos/genética , Receptores de Superfície Celular/genética , Sacarose
14.
PLoS Comput Biol ; 13(10): e1005805, 2017 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-29016600

RESUMO

The interactions between membrane receptors and extracellular ligands control cell-cell and cell-substrate adhesion, and environmental responsiveness by representing the initial steps of cell signaling pathways. These interactions can be spatial-temporally regulated when different extracellular ligands are tethered. The detailed mechanisms of this spatial-temporal regulation, including the competition between distinct ligands with overlapping binding sites and the conformational flexibility in multi-specific ligand assemblies have not been quantitatively evaluated. We present a new coarse-grained model to realistically simulate the binding process between multi-specific ligands and membrane receptors on cell surfaces. The model simplifies each receptor and each binding site in a multi-specific ligand as a rigid body. Different numbers or types of ligands are spatially organized together in the simulation. These designs were used to test the relation between the overall binding of a multi-specific ligand and the affinity of its cognate binding site. When a variety of ligands are exposed to cells expressing different densities of surface receptors, we demonstrated that ligands with reduced affinities have higher specificity to distinguish cells based on the relative concentrations of their receptors. Finally, modification of intramolecular flexibility was shown to play a role in optimizing the binding between receptors and ligands. In summary, our studies bring new insights to the general principles of ligand-receptor interactions. Future applications of our method will pave the way for new strategies to generate next-generation biologics.


Assuntos
Ligantes , Ligação Proteica , Receptores de Superfície Celular/química , Receptores de Superfície Celular/metabolismo , Algoritmos , Sítios de Ligação , Biologia Computacional , Simulação de Dinâmica Molecular , Método de Monte Carlo
15.
Proc Natl Acad Sci U S A ; 114(28): 7210-7215, 2017 07 11.
Artigo em Inglês | MEDLINE | ID: mdl-28652338

RESUMO

Cells can often be recognized by the concentrations of receptors expressed on their surface. For better (targeted drug treatment) or worse (targeted infection by pathogens), it is clearly important to be able to target cells selectively. A good targeting strategy would result in strong binding to cells with the desired receptor profile and barely binding to other cells. Using a simple model, we formulate optimal design rules for multivalent particles that allow them to distinguish target cells based on their receptor profile. We find the following: (i) It is not a good idea to aim for very strong binding between the individual ligands on the guest (delivery vehicle) and the receptors on the host (cell). Rather, one should exploit multivalency: High sensitivity to the receptor density on the host can be achieved by coating the guest with many ligands that bind only weakly to the receptors on the cell surface. (ii) The concentration profile of the ligands on the guest should closely match the composition of the cognate membrane receptors on the target surface. And (iii) irrespective of all details, the effective strength of the ligand-receptor interaction should be of the order of the thermal energy [Formula: see text], where [Formula: see text] is the absolute temperature and [Formula: see text] is Boltzmann's constant. We present simulations that support the theoretical predictions. We speculate that, using the above design rules, it should be possible to achieve targeted drug delivery with a greatly reduced incidence of side effects.


Assuntos
Membrana Celular/efeitos dos fármacos , Sistemas de Liberação de Medicamentos , Endocitose , Ligantes , Neoplasias/metabolismo , Membrana Celular/metabolismo , Simulação por Computador , Dimerização , Humanos , Lipídeos/química , Membranas/metabolismo , Modelos Estatísticos , Método de Monte Carlo , Nanopartículas/química , Polímeros/química , Ligação Proteica , Receptores de Superfície Celular/metabolismo , Temperatura , Termodinâmica
16.
Nat Immunol ; 18(6): 665-674, 2017 06.
Artigo em Inglês | MEDLINE | ID: mdl-28459435

RESUMO

Tissue macrophages provide immunological defense and contribute to the establishment and maintenance of tissue homeostasis. Here we used constitutive and inducible mutagenesis to delete the nuclear transcription regulator Mecp2 in macrophages. Mice that lacked the gene encoding Mecp2, which is associated with Rett syndrome, in macrophages did not show signs of neurodevelopmental disorder but displayed spontaneous obesity, which was linked to impaired function of brown adipose tissue (BAT). Specifically, mutagenesis of a BAT-resident Cx3Cr1+ macrophage subpopulation compromised homeostatic thermogenesis but not acute, cold-induced thermogenesis. Mechanistically, malfunction of BAT in pre-obese mice with mutant macrophages was associated with diminished sympathetic innervation and local titers of norepinephrine, which resulted in lower expression of thermogenic factors by adipocytes. Mutant macrophages overexpressed the signaling receptor and ligand PlexinA4, which might contribute to the phenotype by repulsion of sympathetic axons expressing the transmembrane semaphorin Sema6A. Collectively, we report a previously unappreciated homeostatic role for macrophages in the control of tissue innervation. Disruption of this circuit in BAT resulted in metabolic imbalance.


Assuntos
Tecido Adiposo Marrom/imunologia , Macrófagos/imunologia , Proteína 2 de Ligação a Metil-CpG/genética , Sistema Nervoso Simpático/metabolismo , Termogênese/imunologia , Adipócitos Marrons , Tecido Adiposo Marrom/inervação , Tecido Adiposo Marrom/metabolismo , Animais , Axônios/metabolismo , Receptor 1 de Quimiocina CX3C , Metabolismo Energético/imunologia , Citometria de Fluxo , Homeostase , Immunoblotting , Macrófagos/metabolismo , Camundongos , Mutagênese Sítio-Dirigida , Proteínas do Tecido Nervoso/metabolismo , Norepinefrina/metabolismo , Obesidade/genética , Reação em Cadeia da Polimerase em Tempo Real , Receptores de Superfície Celular/metabolismo , Receptores de Quimiocinas/metabolismo , Semaforinas/metabolismo
17.
Phys Biol ; 13(6): 066010, 2016 12 06.
Artigo em Inglês | MEDLINE | ID: mdl-27922830

RESUMO

Surface plasmon resonance (SPR) chips are widely used to measure association and dissociation rates for the binding kinetics between two species of chemicals, e.g., cell receptors and ligands. It is commonly assumed that ligands are spatially well mixed in the SPR region, and hence a mean-field rate equation description is appropriate. This approximation however ignores the spatial fluctuations as well as temporal correlations induced by multiple local rebinding events, which become prominent for slow diffusion rates and high binding affinities. We report detailed Monte Carlo simulations of ligand binding kinetics in an SPR cell subject to laminar flow. We extract the binding and dissociation rates by means of the techniques frequently employed in experimental analysis that are motivated by the mean-field approximation. We find major discrepancies in a wide parameter regime between the thus extracted rates and the known input simulation values. These results underscore the crucial quantitative importance of spatio-temporal correlations in binary reaction kinetics in SPR cell geometries, and demonstrate the failure of a mean-field analysis of SPR cells in the regime of high Damköhler number [Formula: see text], where the spatio-temporal correlations due to diffusive transport and ligand-receptor rebinding events dominate the dynamics of SPR systems.


Assuntos
Método de Monte Carlo , Receptores de Superfície Celular/metabolismo , Ressonância de Plasmônio de Superfície , Simulação por Computador , Difusão , Desenho de Equipamento , Cinética , Ligantes , Ressonância de Plasmônio de Superfície/instrumentação
18.
PLoS One ; 11(10): e0163352, 2016.
Artigo em Inglês | MEDLINE | ID: mdl-27706188

RESUMO

In this study, assessment of the safety of transgenic rice T1C-1 expressing Cry1C was carried out by: (1) studying horizontal gene transfer (HGT) in Sprague Dawley rats fed transgenic rice for 90 d; (2) examining the effect of Cry1C protein in vitro on digestibility and allergenicity; and (3) studying the changes of intestinal microbiota in rats fed with transgenic rice T1C-1 in acute and subchronic toxicity tests. Sprague Dawley rats were fed a diet containing either 60% GM Bacillus thuringiensis (Bt) rice T1C-1 expressing Cry1C protein, the parental rice Minghui 63, or a basic diet for 90 d. The GM Bt rice T1C-1 showed no evidence of HGT between rats and transgenic rice. Sequence searching of the Cry1C protein showed no homology with known allergens or toxins. Cry1C protein was rapidly degraded in vitro with simulated gastric and intestinal fluids. The expressed Cry1C protein did not induce high levels of specific IgG and IgE antibodies in rats. The intestinal microbiota of rats fed T1C-1 was also analyzed in acute and subchronic toxicity tests by DGGE. Cluster analysis of DGGE profiles revealed significant individual differences in the rats' intestinal microbiota.


Assuntos
Alérgenos/imunologia , Proteínas de Bactérias/genética , Transferência Genética Horizontal/fisiologia , Intestinos/microbiologia , Oryza/genética , Receptores de Superfície Celular/genética , Animais , Bacillus thuringiensis/genética , Bacillus thuringiensis/metabolismo , Bactérias/classificação , Bactérias/genética , Bactérias/isolamento & purificação , Proteínas de Bactérias/imunologia , Proteínas de Bactérias/metabolismo , Análise por Conglomerados , Fezes/microbiologia , Feminino , Alimentos Geneticamente Modificados/toxicidade , Variação Genética , Imunoglobulina G/sangue , Imunoglobulina G/imunologia , Imunoglobulina M/sangue , Imunoglobulina M/imunologia , Proteínas de Insetos , Mucosa Intestinal/metabolismo , Masculino , Microbiota , Músculos/metabolismo , Oryza/metabolismo , Filogenia , Plantas Geneticamente Modificadas/genética , RNA Ribossômico 16S/genética , RNA Ribossômico 16S/metabolismo , Ratos , Ratos Sprague-Dawley , Receptores de Superfície Celular/imunologia , Receptores de Superfície Celular/metabolismo , Testes de Toxicidade Aguda
19.
Viral Immunol ; 29(10): 546-556, 2016 12.
Artigo em Inglês | MEDLINE | ID: mdl-27643915

RESUMO

Porcine reproductive and respiratory syndrome virus (PRRSV) is an economically important global swine pathogen. PRRSV infects porcine dendritic cells (DCs), but the effects of the interactions with DCs are largely unknown. Current research focuses on the production and regulation of interferons and selected inflammatory cytokines in DCs, which may play key roles in immune modulation. In addition, PRRSV also downregulates swine leukocyte antigen class I (SLA-I), SLA-II, and CD80/86 costimulatory molecules in DCs. In this study, we aim to evaluate the PRRSV immunomodulatory effects on monocyte-derived DCs (MoDCs) through interactions with porcine DC-SIGN (pDC-SIGN) receptor. We demonstrated that blocking the PRRSV and pDC-SIGN interactions in MoDCs with recombinant hICAM-3 did not affect the regulatory effects of PRRSV on SLA-I, SLA-II, or CD80/86 molecules. The hICAM-3 did not affect the morphological changes on MoDCs associated with their activation and maturation after PRRSV infection, and did not impair the virus infectivity in these cells either. The mRNA levels of tumor necrosis factor alpha (TNF-α), IL-12p35, IL-1ß, and IL-6 were upregulated after hICAM-3 treatment or PRRSV infection, but in the presence of the blockage of pDC-SIGN in MoDCs with hICAM-3, PRRSV did not modulate the expression of these genes. However, in the presence of an anti-pDC-SIGN monoclonal antibody (mAb), we showed that PRRSV infection significantly reduced the mRNA expression levels of TNF-α and IL-1α, but enhanced the expression of IL-12p35 in MoDCs. Both hICAM-3-Fc and pDC-SIGN mAb treatments did not modulate proinflammatory cytokine protein levels in the culture supernatants of PRRSV-infected MoDCs. The results indicate that blocking the PRRSV-pDC-SIGN interactions by recombinant hICAM-3-Fc did not significantly affect virus infectivity, DC maturation, and proinflammatory cytokine gene expression in infected MoDCs. However, blocking the PRRSV-pDC-SIGN interactions on MoDCs with an anti-pDC-SIGN mAb revealed differential regulatory effects on specific proinflammatory gene expressions in those cells.


Assuntos
Moléculas de Adesão Celular/metabolismo , Citocinas/metabolismo , Células Dendríticas/imunologia , Células Dendríticas/metabolismo , Imunomodulação , Lectinas Tipo C/metabolismo , Síndrome Respiratória e Reprodutiva Suína/virologia , Vírus da Síndrome Respiratória e Reprodutiva Suína/imunologia , Receptores de Superfície Celular/metabolismo , Animais , Anticorpos Monoclonais/metabolismo , Antígenos CD/metabolismo , Moléculas de Adesão Celular/imunologia , Interleucinas/metabolismo , Lectinas Tipo C/imunologia , Monócitos/citologia , Síndrome Respiratória e Reprodutiva Suína/economia , Síndrome Respiratória e Reprodutiva Suína/imunologia , Vírus da Síndrome Respiratória e Reprodutiva Suína/patogenicidade , RNA Mensageiro/metabolismo , Receptores de Superfície Celular/imunologia , Proteínas Recombinantes/metabolismo , Sus scrofa , Suínos
20.
Pol J Vet Sci ; 19(2): 407-14, 2016.
Artigo em Inglês | MEDLINE | ID: mdl-27487517

RESUMO

Platelets play a crucial role in hemostasis. Their activation has not yet been evaluated in healthy dogs with a normal and low platelet count. The aim of this study was to determine the influence of activators on platelet activation in dogs with a normal platelet count and asymptomatic thrombocytopenia. 72 clinically healthy dogs were enrolled. Patients were allocated into three groups. Group 1 consisted of 30 dogs with a normal platelet count, group 2 included 22 dogs with a platelet count between 100 and 200×109/l and group 3 consisted of 20 dogs with a platelet count lower than 100×109/l. Platelet rich-plasma (PRP) was obtained from peripheral blood samples using tripotassium ethylenediaminetetraacetic acid (K3-EDTA) as anticoagulant. Next, platelets were stimulated using phorbol-12-myristate-13-acetate or thrombin, stabilized using procaine or left unstimulated. The expression of CD51 and CD41/CD61 was evaluated. Co-expression of CD41/CD61 and Annexin V served as a marker of platelet activation. The expression of CD41/CD61 and CD51 did not differ between the 3 groups. Thrombin-stimulated platelets had a significantly higher activity in dogs with a normal platelet count than in dogs with asymptomatic thrombocytopenia. Procaine inhibited platelet activity in all groups. In conclusion, activation of platelets of healthy dogs in vitro varied depending on the platelet count and platelet activator.


Assuntos
Plaquetas/fisiologia , Doenças do Cão/sangue , Citometria de Fluxo/veterinária , Ativação Plaquetária/fisiologia , Contagem de Plaquetas/veterinária , Trombocitopenia/veterinária , Animais , Cães , Feminino , Regulação da Expressão Gênica/fisiologia , Masculino , Receptores de Superfície Celular/genética , Receptores de Superfície Celular/metabolismo , Trombocitopenia/sangue
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