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1.
Nutr Neurosci ; 27(1): 87-95, 2024 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-36583502

RESUMO

Leptin is a tonic appetite-regulating hormone, which is integral for the long-term regulation of energy balance. The current evidence suggests that the typical orexigenic or anorexigenic response of many of these appetite-regulating hormones, most notably ghrelin and cholecystokinin (CCK), require leptin to function whereas glucagon-like peptide-1 (GLP-1) is required for leptin to function, and these responses are altered when leptin injection or gene therapy is administered in combination with these same hormones or respective agonists. The appetite-regulatory pathway is complex, thus peptide tyrosine tyrosine (PYY), brain-derived neurotrophic factor (BDNF), orexin-A (OXA), and amylin also maintain ties to leptin, however these are less well understood. While reviews to date have focused on the existing relationships between leptin and the various neuropeptide modulators of appetite within the central nervous system (CNS) or it's role in thermogenesis, no review paper has synthesised the information regarding the interactions between appetite-regulating hormones and how leptin as a chronic regulator of energy balance can influence the acute appetite-regulatory response. Current evidence suggests that potential relationships exist between leptin and the circulating peripheral appetite hormones ghrelin, GLP-1, CCK, OXA and amylin to exhibit either synergistic or opposing effects on appetite inhibition. Though more research is warranted, leptin appears to be integral in both energy intake and energy expenditure. More specifically, functional leptin receptors appear to play an essential role in these processes.


Assuntos
Grelina , Leptina , Grelina/metabolismo , Polipeptídeo Amiloide das Ilhotas Pancreáticas/metabolismo , Polipeptídeo Amiloide das Ilhotas Pancreáticas/farmacologia , Apetite , Ingestão de Energia , Peptídeo 1 Semelhante ao Glucagon , Peptídeo YY , Metabolismo Energético , Tirosina/metabolismo , Tirosina/farmacologia
2.
Cell Metab ; 34(10): 1486-1498.e7, 2022 10 04.
Artigo em Inglês | MEDLINE | ID: mdl-36198293

RESUMO

Late eating has been linked to obesity risk. It is unclear whether this is caused by changes in hunger and appetite, energy expenditure, or both, and whether molecular pathways in adipose tissues are involved. Therefore, we conducted a randomized, controlled, crossover trial (ClinicalTrials.gov NCT02298790) to determine the effects of late versus early eating while rigorously controlling for nutrient intake, physical activity, sleep, and light exposure. Late eating increased hunger (p < 0.0001) and altered appetite-regulating hormones, increasing waketime and 24-h ghrelin:leptin ratio (p < 0.0001 and p = 0.006, respectively). Furthermore, late eating decreased waketime energy expenditure (p = 0.002) and 24-h core body temperature (p = 0.019). Adipose tissue gene expression analyses showed that late eating altered pathways involved in lipid metabolism, e.g., p38 MAPK signaling, TGF-ß signaling, modulation of receptor tyrosine kinases, and autophagy, in a direction consistent with decreased lipolysis/increased adipogenesis. These findings show converging mechanisms by which late eating may result in positive energy balance and increased obesity risk.


Assuntos
Fome , Sobrepeso , Adulto , Apetite , Ingestão de Alimentos/fisiologia , Ingestão de Energia , Metabolismo Energético/fisiologia , Grelina/metabolismo , Humanos , Fome/fisiologia , Leptina/metabolismo , Redes e Vias Metabólicas , Obesidade/metabolismo , Fator de Crescimento Transformador beta/metabolismo , Tirosina/metabolismo , Proteínas Quinases p38 Ativadas por Mitógeno/metabolismo
3.
DNA Res ; 29(5)2022 Aug 23.
Artigo em Inglês | MEDLINE | ID: mdl-35980175

RESUMO

Mucuna pruriens, commonly called velvet bean, is the main natural source of levodopa (L-DOPA), which has been marketed as a psychoactive drug for the clinical management of Parkinson's disease and dopamine-responsive dystonia. Although velvet bean is a very important plant species for food and pharmaceutical manufacturing, the lack of genetic and genomic information about this species severely hinders further molecular research thereon and biotechnological development. Here, we reported the first velvet bean genome, with a size of 500.49 Mb and 11 chromosomes encoding 28,010 proteins. Genomic comparison among legume species indicated that velvet bean speciated ∼29 Ma from soybean clade, without specific genome duplication. Importantly, we identified 21 polyphenol oxidase coding genes that catalyse l-tyrosine to L-DOPA in velvet bean, and two subfamilies showing tandem expansion on Chr3 and Chr7 after speciation. Interestingly, disease-resistant and anti-pathogen gene families were found contracted in velvet bean, which might be related to the expansion of polyphenol oxidase. Our study generated a high-quality genomic reference for velvet bean, an economically important agricultural and medicinal plant, and the newly reported L-DOPA biosynthetic genes could provide indispensable information for the biotechnological and sustainable development of an environment-friendly L-DOPA biosynthesis processing method.


Assuntos
Mucuna , Catecol Oxidase/genética , Catecol Oxidase/metabolismo , Cromossomos/metabolismo , Dopamina/metabolismo , Levodopa/genética , Levodopa/metabolismo , Mucuna/genética , Mucuna/metabolismo , Preparações Farmacêuticas/metabolismo , Pesquisa , Tirosina/genética , Tirosina/metabolismo
4.
Am J Physiol Cell Physiol ; 317(2): C189-C199, 2019 08 01.
Artigo em Inglês | MEDLINE | ID: mdl-31042421

RESUMO

Sepsis is a systemic inflammatory response syndrome resulting from infection. This study aimed at exploring the role of microRNA-140 (miR-140) in septic mice. Wnt family member 11 (WNT11) was verified to be a target gene of miR-140 after bioinformatic prediction and dual luciferase reporter gene assay. Importantly, miR-140 negatively regulated WNT11. We initially induced the model of sepsis by endotoxin, and then ectopic expression and knockdown experiments were performed to explore the functional role of miR-140 in sepsis. Additionally, cross-sectional areas of muscle fiber, lactic acid production, 3-methylhistidine (3-MH) and tyrosine (Tyr) production in extensor digitorium longus (EDL) muscles, and serum levels of inflammatory factors were examined. The effect of miR-140 on the expression of WNT signaling pathway-related and apoptosis-related factors in skeletal muscle tissue was determined. The experimental results indicated that upregulated miR-140 or silenced WNT11 increased cross-sectional areas of muscle fiber while decreasing lactic acid production, skeletal muscle cell apoptosis [corresponding to downregulated B cell lymphoma 2 (Bcl-2)-associated X protein (Bax) and caspase-3 and upregulated Bcl-2], and the proteolytic rate of Tyr and 3-MH. Also, overexpressed miR-140 or silenced WNT11 reduced inflammation as reflected by decreased serum levels of IL-6, IL-10, and TNF-α. Furthermore, overexpression of miR-140 was shown to suppress the activation of the WNT signaling pathway, accompanied by decreased expression of WNT11, ß-catenin, and GSK-3ß. Taken together, upregulation of miR-140 could potentially inhibit skeletal muscle lactate release, an indirect measure of glycolysis, and atrophy in septic mice through suppressing the WNT signaling pathway via inhibiting WNT11 expression.


Assuntos
Glicólise , MicroRNAs/metabolismo , Músculo Esquelético/metabolismo , Atrofia Muscular/metabolismo , Sepse/metabolismo , Proteínas Wnt/metabolismo , Via de Sinalização Wnt , Animais , Apoptose , Proteínas Reguladoras de Apoptose/metabolismo , Células Cultivadas , Citocinas/sangue , Modelos Animais de Doenças , Regulação para Baixo , Glicogênio Sintase Quinase 3 beta/genética , Glicogênio Sintase Quinase 3 beta/metabolismo , Mediadores da Inflamação/sangue , Ácido Láctico/metabolismo , Lipopolissacarídeos , Masculino , Metilistidinas/metabolismo , Camundongos Endogâmicos BALB C , MicroRNAs/genética , Músculo Esquelético/patologia , Atrofia Muscular/induzido quimicamente , Atrofia Muscular/genética , Atrofia Muscular/patologia , Sepse/induzido quimicamente , Sepse/genética , Sepse/patologia , Tirosina/metabolismo , Proteínas Wnt/genética , beta Catenina/genética , beta Catenina/metabolismo
6.
Anal Chem ; 89(17): 9307-9314, 2017 09 05.
Artigo em Inglês | MEDLINE | ID: mdl-28796482

RESUMO

Albeit much less abundant than Ser/Thr phosphorylation (pSer/pThr), Tyr phosphorylation (pTyr) is considered as a hallmark in cellular signal transduction. However, its analysis at the proteome level remains challenging. The conventional immunopurification (IP) approach using antibodies specific to pTyr sites is known to have low sensitivity, poor reproducibility and high cost. Our recent study indicated that SH2 domain-derived pTyr-superbinder is a good replacement of pTyr antibody for the specific enrichment of pTyr peptides for phosphoproteomics analysis. In this study, we presented an efficient SH2 superbinder based workflow for the sensitive analysis of tyrosine phosphoproteome. This new method can identify 41% more pTyr peptides than the previous method. Its excellent performance was demonstrated by the analysis of a variety of different samples. For the highly tyrosine phosphorylated sample, for example, pervanadate-treated Jurkat T cells, it identified over 1800 high confident pTyr sites from only 2 mg of proteins. For the unstimulated Jurkat cells, where the pTyr events rarely occurred, it identified 343 high confident pTyr sites from 5 mg of proteins, which was 31% more than that obtained by the antibody-based method. For the heterogeneous sample of tissue, it identified 197 high confident pTyr sites from 5 mg protein digest of mouse skeletal muscle. In general, it is a sensitive, robust and cost-effective approach and would have wide applications in the study of the regulatory role of tyrosine phosphorylation in diverse physiological and pathological processes.


Assuntos
Proteoma/análise , Tirosina/química , Tirosina/metabolismo , Sequência de Aminoácidos , Humanos , Células Jurkat , Espectrometria de Massas/métodos , Peptídeos/química , Peptídeos/metabolismo , Fosforilação , Proteômica/métodos , Reprodutibilidade dos Testes , Sensibilidade e Especificidade
7.
BMC Neurosci ; 17(1): 21, 2016 05 18.
Artigo em Inglês | MEDLINE | ID: mdl-27194427

RESUMO

BACKGROUND: Red/near-infrared light therapy (R/NIR-LT) has been developed as a treatment for a range of conditions, including injury to the central nervous system (CNS). However, clinical trials have reported variable or sub-optimal outcomes, possibly because there are few optimized treatment protocols for the different target tissues. Moreover, the low absolute, and wavelength dependent, transmission of light by tissues overlying the target site make accurate dosing problematic. RESULTS: In order to optimize light therapy treatment parameters, we adapted a mouse spinal cord organotypic culture model to the rat, and characterized myelination and oxidative stress following a partial transection injury. The ex vivo model allows a more accurate assessment of the relative effect of different illumination wavelengths (adjusted for equal quantal intensity) on the target tissue. Using this model, we assessed oxidative stress following treatment with four different wavelengths of light: 450 nm (blue); 510 nm (green); 660 nm (red) or 860 nm (infrared) at three different intensities: 1.93 × 10(16) (low); 3.85 × 10(16) (intermediate) and 7.70 × 10(16) (high) photons/cm(2)/s. We demonstrate that the most effective of the tested wavelengths to reduce immunoreactivity of the oxidative stress indicator 3-nitrotyrosine (3NT) was 660 nm. 860 nm also provided beneficial effects at all tested intensities, significantly reducing oxidative stress levels relative to control (p ≤ 0.05). CONCLUSIONS: Our results indicate that R/NIR-LT is an effective antioxidant therapy, and indicate that effective wavelengths and ranges of intensities of treatment can be adapted for a variety of CNS injuries and conditions, depending upon the transmission properties of the tissue to be treated.


Assuntos
Doenças Neurodegenerativas/terapia , Estresse Oxidativo/fisiologia , Fototerapia/métodos , Traumatismos da Medula Espinal/terapia , Medula Espinal/metabolismo , Animais , Animais Recém-Nascidos , Modelos Animais de Doenças , Imuno-Histoquímica , Raios Infravermelhos/uso terapêutico , Camundongos , Microscopia Confocal , Doenças Neurodegenerativas/etiologia , Doenças Neurodegenerativas/metabolismo , Doenças Neurodegenerativas/patologia , Distribuição Aleatória , Ratos , Medula Espinal/patologia , Traumatismos da Medula Espinal/complicações , Traumatismos da Medula Espinal/metabolismo , Traumatismos da Medula Espinal/patologia , Técnicas de Cultura de Tecidos , Tirosina/análogos & derivados , Tirosina/metabolismo
8.
Am J Obstet Gynecol ; 214(3): 369.e1-8, 2016 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-26928151

RESUMO

BACKGROUND: The uteroplacental vascular supply is a critical determinant of placental function and fetal growth. Current methods for the in vivo assessment of placental blood flow are limited. OBJECTIVE: We demonstrate the feasibility of the use of contrast-enhanced ultrasound imaging to visualize and quantify perfusion kinetics in the intervillous space of the primate placenta. STUDY DESIGN: Pregnant Japanese macaques were studied at mid second trimester and in the early third trimester. Markers of injury were assessed in placenta samples from animals with or without contrast-enhanced ultrasound exposure (n = 6/group). Human subjects were recruited immediately before scheduled first-trimester pregnancy termination. All studies were performed with maternal intravenous infusion of lipid-shelled octofluoropropane microbubbles with image acquisition with a multipulse contrast-specific algorithm with destruction-replenishment analysis of signal intensity for assessment of perfusion. RESULTS: In macaques, the rate of perfusion in the intervillous space was increased with advancing gestation. No evidence of microvascular hemorrhage or acute inflammation was found in placental villous tissue and expression levels of caspase-3, nitrotyrosine and heat shock protein 70 as markers of apoptosis, nitrative, and oxidative stress, respectively, were unchanged by contrast-enhanced ultrasound exposure. In humans, placental perfusion was visualized at 11 weeks gestation, and preliminary data reveal regional differences in intervillous space perfusion within an individual placenta. By electron microscopy, we demonstrate no evidence of ultrastructure damage to the microvilli on the syncytiotrophoblast after first-trimester ultrasound studies. CONCLUSIONS: Use of contrast-enhanced ultrasound did not result in placental structural damage and was able to identify intervillous space perfusion rate differences within a placenta. Contrast-enhanced ultrasound imaging may offer a safe clinical tool for the identification of pregnancies that are at risk for vascular insufficiency; early recognition may facilitate intervention and improved pregnancy outcomes.


Assuntos
Vilosidades Coriônicas/irrigação sanguínea , Vilosidades Coriônicas/diagnóstico por imagem , Meios de Contraste , Microbolhas , Circulação Placentária , Algoritmos , Animais , Caspase 3/metabolismo , Vilosidades Coriônicas/ultraestrutura , Meios de Contraste/efeitos adversos , Feminino , Proteínas de Choque Térmico HSP70/metabolismo , Humanos , Cinética , Macaca , Microbolhas/efeitos adversos , Gravidez , Primeiro Trimestre da Gravidez/fisiologia , Segundo Trimestre da Gravidez/fisiologia , Terceiro Trimestre da Gravidez/fisiologia , Processamento de Sinais Assistido por Computador , Trofoblastos/ultraestrutura , Tirosina/análogos & derivados , Tirosina/metabolismo , Ultrassonografia
9.
J Sci Food Agric ; 96(11): 3831-7, 2016 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-26692071

RESUMO

BACKGROUND: White mold-ripened cheeses were investigated with the objective of proposing a colorimetric method to monitor the surface growth of Penicillium candidum and to evaluate the influence of the mesophilic (homofermentative (QMO) and heterofermentative (QMLD)) and thermophilic (QT) starter cultures on the physicochemical composition and sensory description. RESULTS: The whiteness index was effective in proving the appearance of superficial mycelium and the stability of white mold growth. The lactic cultures showed significant influence on most of the physicochemical analyses. The cheese made with thermophilic lactic culture had a 1 day gain in the growth of mycelium on the surface; nevertheless, the appearance of this product was potentially not acceptable for consumers. The heterofermentative mesophilic cheese had a better appearance and texture profile. However, the homofermentative mesophilic cheese showed aspects of fresh cheese and was acceptable for a wide range of consumers. CONCLUSION: The whiteness index was efficient to monitor the surface growth of P. candidum. The highest proteolytic effect was found in the QMLD and QT cultures. However, the cheese elaborated with the QMLD culture showed the best sensory acceptance. © 2015 Society of Chemical Industry.


Assuntos
Queijo/análise , Inspeção de Alimentos , Qualidade dos Alimentos , Lactobacillus delbrueckii/crescimento & desenvolvimento , Lactococcus lactis/crescimento & desenvolvimento , Penicillium/crescimento & desenvolvimento , Streptococcus thermophilus/crescimento & desenvolvimento , Brasil , Queijo/microbiologia , Fenômenos Químicos , Fermentação , Preferências Alimentares , Humanos , Concentração de Íons de Hidrogênio , Lactobacillus delbrueckii/metabolismo , Lactococcus lactis/metabolismo , Fenômenos Mecânicos , Proteínas do Leite/análise , Proteínas do Leite/metabolismo , Penicillium/metabolismo , Análise de Componente Principal , Proteólise , Sensação , Streptococcus thermophilus/metabolismo , Propriedades de Superfície , Tirosina/análise , Tirosina/metabolismo
10.
J Comput Chem ; 37(4): 404-15, 2016 Feb 05.
Artigo em Inglês | MEDLINE | ID: mdl-26503829

RESUMO

A computational protein design method is extended to allow Monte Carlo simulations where two ligands are titrated into a protein binding pocket, yielding binding free energy differences. These provide a stringent test of the physical model, including the energy surface and sidechain rotamer definition. As a test, we consider tyrosyl-tRNA synthetase (TyrRS), which has been extensively redesigned experimentally. We consider its specificity for its substrate l-tyrosine (l-Tyr), compared to the analogs d-Tyr, p-acetyl-, and p-azido-phenylalanine (ac-Phe, az-Phe). We simulate l- and d-Tyr binding to TyrRS and six mutants, and compare the structures and binding free energies to a more rigorous "MD/GBSA" procedure: molecular dynamics with explicit solvent for structures and a Generalized Born + Surface Area model for binding free energies. Next, we consider l-Tyr, ac- and az-Phe binding to six other TyrRS variants. The titration results are sensitive to the precise rotamer definition, which involves a short energy minimization for each sidechain pair to help relax bad contacts induced by the discrete rotamer set. However, when designed mutant structures are rescored with a standard GBSA energy model, results agree well with the more rigorous MD/GBSA. As a third test, we redesign three amino acid positions in the substrate coordination sphere, with either l-Tyr or d-Tyr as the ligand. For two, we obtain good agreement with experiment, recovering the wildtype residue when l-Tyr is the ligand and a d-Tyr specific mutant when d-Tyr is the ligand. For the third, we recover His with either ligand, instead of wildtype Gln.


Assuntos
Termodinâmica , Tirosina-tRNA Ligase/química , Tirosina-tRNA Ligase/metabolismo , Tirosina/química , Tirosina/metabolismo , Sítios de Ligação/efeitos dos fármacos , Ligantes , Simulação de Dinâmica Molecular , Método de Monte Carlo , Proteínas Mutantes/química , Proteínas Mutantes/genética , Proteínas Mutantes/metabolismo , Ligação Proteica , Tirosina-tRNA Ligase/genética
11.
PLoS One ; 8(10): e79277, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-24205378

RESUMO

T cell signaling is triggered through stimulation of the T cell receptor and costimulatory receptors. Receptor activation leads to the formation of membrane-proximal protein microclusters. These clusters undergo tyrosine phosphorylation and organize multiprotein complexes thereby acting as molecular signaling platforms. Little is known about how the quantity and phosphorylation levels of microclusters are affected by costimulatory signals and the activity of specific signaling proteins. We combined micrometer-sized, microcontact printed, striped patterns of different stimuli and simultaneous analysis of different cell strains with image processing protocols to address this problem. First, we validated the stimulation protocol by showing that high expression levels CD28 result in increased cell spreading. Subsequently, we addressed the role of costimulation and a specific phosphotyrosine phosphatase in cluster formation by including a SHP2 knock-down strain in our system. Distinguishing cell strains using carboxyfluorescein succinimidyl ester enabled a comparison within single samples. SHP2 exerted its effect by lowering phosphorylation levels of individual clusters while CD28 costimulation mainly increased the number of signaling clusters and cell spreading. These effects were observed for general tyrosine phosphorylation of clusters and for phosphorylated PLCγ1. Our analysis enables a clear distinction between factors determining the number of microclusters and those that act on these signaling platforms.


Assuntos
Receptores Coestimuladores e Inibidores de Linfócitos T/fisiologia , Monoéster Fosfórico Hidrolases/metabolismo , Receptores de Antígenos de Linfócitos T/fisiologia , Transdução de Sinais , Linfócitos T/fisiologia , Antígenos CD28/metabolismo , Receptores Coestimuladores e Inibidores de Linfócitos T/metabolismo , Técnicas de Silenciamento de Genes , Humanos , Células Jurkat , Fosfolipase C gama/metabolismo , Fosforilação , Proteína Tirosina Fosfatase não Receptora Tipo 11/genética , Receptores de Antígenos de Linfócitos T/metabolismo , Linfócitos T/metabolismo , Tirosina/metabolismo
12.
J Comput Chem ; 34(28): 2472-84, 2013 Oct 30.
Artigo em Inglês | MEDLINE | ID: mdl-24037756

RESUMO

We describe an automated procedure for protein design, implemented in a flexible software package, called Proteus. System setup and calculation of an energy matrix are done with the XPLOR modeling program and its sophisticated command language, supporting several force fields and solvent models. A second program provides algorithms to search sequence space. It allows a decomposition of the system into groups, which can be combined in different ways in the energy function, for both positive and negative design. The whole procedure can be controlled by editing 2-4 scripts. Two applications consider the tyrosyl-tRNA synthetase enzyme and its successful redesign to bind both O-methyl-tyrosine and D-tyrosine. For the latter, we present Monte Carlo simulations where the D-tyrosine concentration is gradually increased, displacing L-tyrosine from the binding pocket and yielding the binding free energy difference, in good agreement with experiment. Complete redesign of the Crk SH3 domain is presented. The top 10000 sequences are all assigned to the correct fold by the SUPERFAMILY library of Hidden Markov Models. Finally, we report the acid/base behavior of the SNase protein. Sidechain protonation is treated as a form of mutation; it is then straightforward to perform constant-pH Monte Carlo simulations, which yield good agreement with experiment. Overall, the software can be used for a wide range of application, producing not only native-like sequences but also thermodynamic properties with errors that appear comparable to other current software packages.


Assuntos
Biologia Computacional , Proteínas/química , Software , Algoritmos , Concentração de Íons de Hidrogênio , Modelos Moleculares , Simulação de Dinâmica Molecular , Método de Monte Carlo , Desdobramento de Proteína , Proteínas Proto-Oncogênicas c-crk/química , Tirosina/análogos & derivados , Tirosina/química , Tirosina/metabolismo , Tirosina-tRNA Ligase/química , Tirosina-tRNA Ligase/metabolismo , Domínios de Homologia de src
13.
PLoS One ; 8(7): e68421, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-23935866

RESUMO

Photosystem II (PSII) of photosynthesis has the unique ability to photochemically oxidize water. Recently an engineered bacterioferritin photochemical 'reaction centre' (BFR-RC) using a zinc chlorin pigment (ZnCe6) in place of its native heme has been shown to photo-oxidize bound manganese ions through a tyrosine residue, thus mimicking two of the key reactions on the electron donor side of PSII. To understand the mechanism of tyrosine oxidation in BFR-RCs, and explore the possibility of water oxidation in such a system we have built an atomic-level model of the BFR-RC using ONIOM methodology. We studied the influence of axial ligands and carboxyl groups on the oxidation potential of ZnCe6 using DFT theory, and finally calculated the shift of the redox potential of ZnCe6 in the BFR-RC protein using the multi-conformational molecular mechanics-Poisson-Boltzmann approach. According to our calculations, the redox potential for the first oxidation of ZnCe6 in the BRF-RC protein is only 0.57 V, too low to oxidize tyrosine. We suggest that the observed tyrosine oxidation in BRF-RC could be driven by the ZnCe6 di-cation. In order to increase the efficiency of tyrosine oxidation, and ultimately oxidize water, the first potential of ZnCe6 would have to attain a value in excess of 0.8 V. We discuss the possibilities for modifying the BFR-RC to achieve this goal.


Assuntos
Proteínas de Bactérias/metabolismo , Grupo dos Citocromos b/metabolismo , Ferritinas/metabolismo , Metaloporfirinas/metabolismo , Complexo de Proteína do Fotossistema II/metabolismo , Porfirinas/metabolismo , Proteínas de Bactérias/química , Sítios de Ligação , Clorofilídeos , Grupo dos Citocromos b/química , Ferritinas/química , Concentração de Íons de Hidrogênio , Ligantes , Metaloporfirinas/química , Modelos Moleculares , Conformação Molecular , Método de Monte Carlo , Oxirredução , Complexo de Proteína do Fotossistema II/química , Porfirinas/química , Ligação Proteica , Conformação Proteica , Multimerização Proteica , Soluções , Tirosina/química , Tirosina/metabolismo
14.
Mol Carcinog ; 52(1): 79-83, 2013 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-22086496

RESUMO

Anaplastic lymphoma kinase (ALK) has emerged as an important oncogene in a number of human malignancies ranging from non-Hodgkin lymphoma to neuroblastoma. In the former case, ALK is activated as a consequence of a chromosomal translocation and in the latter due to point mutations. In both cases the transforming potential of these oncogenic forms of ALK have been shown in vitro employing traditional cellular transformation assays including 3T3 foci formation. We reasoned that other ALK mutants which have been identified by the Cancer Genome Project may likewise possess transformation potential. We have selected seven ALK mutants identified in cell lines representative of a variety of human cancers based on position within the ALK protein, zygosity and frequency of detection including R1192Q, K1525E, C1021Y, R412C, A1252V, D1311A, K1518N and have compared their transformation capability in comparison to the published neuroblastoma-associated F1174L ALK mutant when expressed in immortalized p53(-/-) murine embryonic fibroblasts. Whilst the F1174L mutant reproducibly drives foci formation in vitro, the other ALK mutants fail in this task. Furthermore, apart from the F1174L ALK mutant, the ALK protein is not phosphorylated on tyrosine residue 1604 suggesting that they are kinase-inactive in this cellular context. We conclude that not all ALK mutants have transformation potential and may represent "passenger" mutations in the evolution of cancer.


Assuntos
Transformação Celular Neoplásica/genética , Mutação Puntual , Receptores Proteína Tirosina Quinases/genética , Quinase do Linfoma Anaplásico , Animais , Linhagem Celular Tumoral , Fibroblastos/enzimologia , Humanos , Camundongos , Neoplasias/genética , Fosforilação , Tirosina/metabolismo
15.
Haemophilia ; 18(3): 469-75, 2012 May.
Artigo em Inglês | MEDLINE | ID: mdl-21943193

RESUMO

von Willebrand factor (VWF) has the capacity to form a complex with factor VIII (FVIII) which may modulate the immunogenicity of FVIII. It has been proposed that a significant fraction of recombinant FVIII (rFVIII) is unable to bind VWF. In an experimental model studied at the McMaster University in Canada, this VWF-unbound rFVIII fraction showed no coagulant function. Sulphation of FVIII tyrosine (Tyr) 1680 has been reported as essential for the interaction with VWF. In a study performed at the Grifols and CNS-CSIC in Spain, Tyr1680 sulphation was observed to be incomplete in rFVIII and complete in plasma-derived FVIII (pdFVIII). This could explain the incapability of some rFVIII molecules to bind VWF. Experience with immune tolerance induction (ITI) at the Bonn Haemophilia Centre indicates that only eradication of FVIII inhibitors allows safe haemostasis control and the option of prophylactic treatment. Various clinical trials were planned to evaluate the clinical role VWF-containing FVIII concentrates (FVIII/VWF). RES.I.ST (an acronym for REScue Immunotolerance STudy) is an international, prospective study aimed at assessing whether FVIII/VWF can induce ITI in high-risk haemophilia patients (RES.I.ST naïve) and whether patients who previously failed ITI with FVIII alone can be rescued with FVIII/VWF (RES.I.ST experienced). Enrolment started in November 2009. In the FAIReSt.Will (Fanhdi and Alphanate Italian Retrospective Study in Willebrand disease) study, 120 von Willebrand disease (VWD) patients treated with Fanhdi(®) or Alphanate(®) were retrospectively analysed. Efficacy was excellent and no side effects were reported. The ongoing PRO.Will study is a prospective, multicenter trial aimed at assessing the efficacy, safety and pharmacoeconomics of secondary long-term prophylaxis in patients with severe inherited VWD.


Assuntos
Fator VIII/uso terapêutico , Hemofilia A/tratamento farmacológico , Hemostáticos/uso terapêutico , Fator de von Willebrand/uso terapêutico , Inibidores dos Fatores de Coagulação Sanguínea/imunologia , Fator VIII/metabolismo , Hemofilia A/imunologia , Humanos , Tolerância Imunológica/efeitos dos fármacos , Proteínas Recombinantes/metabolismo , Proteínas Recombinantes/uso terapêutico , Tirosina/análogos & derivados , Tirosina/metabolismo , Fator de von Willebrand/metabolismo
16.
J Agric Food Chem ; 59(17): 9475-83, 2011 Sep 14.
Artigo em Inglês | MEDLINE | ID: mdl-21740012

RESUMO

The δ(18)O value of the p-hydroxy group of L-tyrosine depends on the biosynthesis by plants or animals, respectively. In animal proteins it reflects the diet and is therefore an absolute indicator for illegal feeding with meat and bone meal. The aim of this investigation was to perform the positional (18)O determination on L-tyrosine via a one-step enzymatic degradation. Proteins from plants, herbivores, omnivores, and carnivores were characterized by their δ(13)C, δ(15)N, and δ(18)O values, the latter for normalizing the positional δ(18)O values. Their L-tyrosine was degraded by tyrosine phenol lyase to phenol, analyzed as (2,4,6)-tribromophenol. Degradation by tyrosine decarboxylase yielded tyramine. The δ(18)O values of both analytes corresponded to the trophic levels of their sources but were not identical, probably due to an isotope effect on the tyrosine phenol lyase reaction. Availability of the enzyme, easy control of the reaction, and isolation of the analyte are in favor of tyrosine decarboxylase degradation as a routine method.


Assuntos
Ração Animal/análise , Legislação sobre Alimentos , Carne , Minerais , Isótopos de Oxigênio , Tirosina/química , Animais , Produtos Biológicos , Bovinos , Proteínas Alimentares/análise , Encefalopatia Espongiforme Bovina/prevenção & controle , Encefalopatia Espongiforme Bovina/transmissão , Contaminação de Alimentos/análise , Isótopos de Oxigênio/análise , Isótopos de Oxigênio/química , Fenóis/química , Fenóis/metabolismo , Tirosina/metabolismo , Tirosina Descarboxilase/metabolismo , Tirosina Fenol-Liase/metabolismo
17.
BMC Genomics ; 11 Suppl 3: S1, 2010 Dec 01.
Artigo em Inglês | MEDLINE | ID: mdl-21143776

RESUMO

BACKGROUND: Effector secretion is a common strategy of pathogen in mediating host-pathogen interaction. Eight EPIYA-motif containing effectors have recently been discovered in six pathogens. Once these effectors enter host cells through type III/IV secretion systems (T3SS/T4SS), tyrosine in the EPIYA motif is phosphorylated, which triggers effectors binding other proteins to manipulate host-cell functions. The objectives of this study are to evaluate the distribution pattern of EPIYA motif in broad biological species, to predict potential effectors with EPIYA motif, and to suggest roles and biological functions of potential effectors in host-pathogen interactions. RESULTS: A hidden Markov model (HMM) of five amino acids was built for the EPIYA-motif based on the eight known effectors. Using this HMM to search the non-redundant protein database containing 9,216,047 sequences, we obtained 107,231 sequences with at least one EPIYA motif occurrence and 3115 sequences with multiple repeats of the EPIYA motif. Although the EPIYA motif exists among broad species, it is significantly over-represented in some particular groups of species. For those proteins containing at least four copies of EPIYA motif, most of them are from intracellular bacteria, extracellular bacteria with T3SS or T4SS or intracellular protozoan parasites. By combining the EPIYA motif and the adjacent SH2 binding motifs (KK, R4, Tarp and Tir), we built HMMs of nine amino acids and predicted many potential effectors in bacteria and protista by the HMMs. Some potential effectors for pathogens (such as Lawsonia intracellularis, Plasmodium falciparum and Leishmania major) are suggested. CONCLUSIONS: Our study indicates that the EPIYA motif may be a ubiquitous functional site for effectors that play an important pathogenicity role in mediating host-pathogen interactions. We suggest that some intracellular protozoan parasites could secrete EPIYA-motif containing effectors through secretion systems similar to the T3SS/T4SS in bacteria. Our predicted effectors provide useful hypotheses for further studies.


Assuntos
Motivos de Aminoácidos , Interações Hospedeiro-Patógeno , Cadeias de Markov , Sequência de Aminoácidos , Bactérias/metabolismo , Proteínas de Bactérias/análise , Proteínas de Bactérias/química , Proteínas de Bactérias/metabolismo , Bases de Dados de Proteínas , Modelos Biológicos , Modelos Estatísticos , Fosforilação , Ligação Proteica , Estrutura Terciária de Proteína , Tirosina/genética , Tirosina/metabolismo
18.
Cell Metab ; 11(2): 113-24, 2010 Feb 03.
Artigo em Inglês | MEDLINE | ID: mdl-20142099

RESUMO

Fyn null mice display reduced adiposity associated with increased fatty acid oxidation, energy expenditure, and activation of the AMP-dependent protein kinase (AMPK) in skeletal muscle and adipose tissue. The acute pharmacological inhibition of Fyn kinase activity with SU6656 in wild-type mice reproduces these metabolic effects and induced a specific reduction in fat mass with no change in lean mass. LKB1, the main upstream AMPK kinase (AMPKK) in peripheral tissues, was redistributed from the nucleus into the cytoplasm of cells treated with SU6656 and in cells expressing a kinase-deficient, but not a constitutively kinase-active, Fyn mutant. Moreover, Fyn kinase directly phosphorylated LKB1 on tyrosine 261 and 365 residues, and mutations of these sites resulted in LKB1 export into the cytoplasm and increased AMPK phosphorylation. These data demonstrate a crosstalk between Fyn tyrosine kinase and the AMPK energy-sensing pathway, through Fyn-dependent regulation of the AMPK upstream activator LKB1.


Assuntos
Peso Corporal , Metabolismo Energético , Proteínas Serina-Treonina Quinases/metabolismo , Proteínas Proto-Oncogênicas c-fyn/metabolismo , Tirosina/metabolismo , Proteínas Quinases Ativadas por AMP , Animais , Peso Corporal/efeitos dos fármacos , Linhagem Celular , Metabolismo Energético/efeitos dos fármacos , Técnicas de Inativação de Genes , Indóis/administração & dosagem , Indóis/farmacologia , Metabolismo dos Lipídeos/efeitos dos fármacos , Masculino , Camundongos , Camundongos Endogâmicos C57BL , Mutação , Fosforilação , Proteínas Serina-Treonina Quinases/análise , Proteínas Serina-Treonina Quinases/genética , Proteínas Proto-Oncogênicas c-fyn/antagonistas & inibidores , Proteínas Proto-Oncogênicas c-fyn/genética , Sulfonamidas/administração & dosagem , Sulfonamidas/farmacologia
19.
Biotech Histochem ; 84(6): 321-8, 2009 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-19634066

RESUMO

We propose that evaluation of protein tyrosine phosphorylation (TP) status in ejaculated spermatozoa under capacitating conditions in an experiment that mimics "in vitro" the physiology of sperm from ejaculation through the female genital tract could potentially be used as a prognostic test for functional competence of sperm in fertilization. Our purpose was to elucidate whether there is a relation between conventional sperm parameters, occurrence of TP and pregnancy outcome obtained from intrauterine insemination (IUI). Semen samples were analyzed according to WHO criteria. TP levels were determined by immunocytochemistry under four different conditions: 1) ejaculated sperm, 2) postselection sperm, 3) postselection sperm incubated 5 h at 37 degrees C and 5% CO(2), and 4) postselection sperm incubated overnight at 37 degrees C and 5% CO(2). Data on sperm tyrosine phosphorylated proteins did not correlate with sperm concentration, progressive motility or normal sperm morphology. TP increased under capacitating conditions and showed a time dependent pattern except for five outlier cases. IUI was performed in 12 selected couples who had neither female nor male infertility factors. The three pregnancies had a time dependent pattern for TP. Of the unsuccessful cases, one had an outlier TP pattern. It appears that a TP time dependent pattern is necessary for fertilization.


Assuntos
Andrologia , Imuno-Histoquímica/métodos , Laboratórios , Espermatozoides/metabolismo , Tirosina/metabolismo , Ejaculação , Feminino , Fertilização in vitro , Humanos , Infertilidade Masculina/metabolismo , Masculino , Fosforilação , Gravidez , Resultado da Gravidez , Prognóstico , Contagem de Espermatozoides , Espermatozoides/citologia , Espermatozoides/fisiologia
20.
Biochemistry ; 48(23): 5332-8, 2009 Jun 16.
Artigo em Inglês | MEDLINE | ID: mdl-19402700

RESUMO

CC chemokine receptor 5 (CCR5) is the receptor for several inflammatory chemokines and is a coreceptor for HIV-1. Posttranslational sulfation of tyrosines in the N-terminal regions of chemokine receptors has been shown to be important in the binding affinity for chemokine ligands. In addition, sulfation of CCR5 is crucial for mediating interactions with HIV-1 envelope protein gp120. The major sulfation pathway for peptides derived from the N-terminal domains of CCR5 and CCR8 and variations of the peptides were determined by in vitro enzymatic sulfation by tyrosylprotein sulfotranferase-2 (TPST-2), subsequent separation of products by RP-HPLC, and mass spectrometry analysis. It was found that the patterns of sulfation and the rates of sulfation for CCR5 and CCR8 depend on the number of amino acids N-terminal of Tyr-3. Results herein address previous seemingly contradictory studies and delineate the temporal sulfation of N-terminal chemokine receptor peptides.


Assuntos
Proteínas de Membrana/metabolismo , Fragmentos de Peptídeos/química , Receptores CCR5/química , Sulfotransferases/metabolismo , Tirosina/química , Sequência de Aminoácidos , Cromatografia Líquida de Alta Pressão , Humanos , Cinética , Dados de Sequência Molecular , Fragmentos de Peptídeos/metabolismo , Receptores CCR5/metabolismo , Receptores CCR8/química , Receptores CCR8/metabolismo , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Espectrometria de Massas por Ionização por Electrospray , Tirosina/metabolismo
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