Búsqueda | Portal de Búsqueda de la BVS Enfermería

1.

Clonal fitness inferred from time-series modelling of single-cell cancer genomes.

Salehi, Sohrab; Kabeer, Farhia; Ceglia, Nicholas; Andronescu, Mirela; Williams, Marc J; Campbell, Kieran R; Masud, Tehmina; Wang, Beixi; Biele, Justina; Brimhall, Jazmine; Gee, David; Lee, Hakwoo; Ting, Jerome; Zhang, Allen W; Tran, Hoa; O'Flanagan, Ciara; Dorri, Fatemeh; Rusk, Nicole; de Algara, Teresa Ruiz; Lee, So Ra; Cheng, Brian Yu Chieh; Eirew, Peter; Kono, Takako; Pham, Jenifer; Grewal, Diljot; Lai, Daniel; Moore, Richard; Mungall, Andrew J; Marra, Marco A; McPherson, Andrew; Bouchard-Côté, Alexandre; Aparicio, Samuel; Shah, Sohrab P.

Nature ; 595(7868): 585-590, 2021 07.

Artículo en Inglés | MEDLINE | ID: mdl-34163070

2.

Radiomics analysis to predict pulmonary nodule malignancy using machine learning approaches.

Warkentin, Matthew T; Al-Sawaihey, Hamad; Lam, Stephen; Liu, Geoffrey; Diergaarde, Brenda; Yuan, Jian-Min; Wilson, David O; Atkar-Khattra, Sukhinder; Grant, Benjamin; Brhane, Yonathan; Khodayari-Moez, Elham; Murison, Kiera R; Tammemagi, Martin C; Campbell, Kieran R; Hung, Rayjean J.

Thorax ; 79(4): 307-315, 2024 Mar 15.

Artículo en Inglés | MEDLINE | ID: mdl-38195644

3.

Loss of apelin blocks the emergence of sprouting angiogenesis in experimental tumors.

Azad, Abul K; Campbell, Kieran R; Zhabyeyev, Pavel; Oudit, Gavin Y; Moore, Ronald B; Murray, Allan G.

FASEB J ; 36(10): e22560, 2022 10.

Artículo en Inglés | MEDLINE | ID: mdl-36165236

4.

Probabilistic cell-type assignment of single-cell RNA-seq for tumor microenvironment profiling.

Zhang, Allen W; O'Flanagan, Ciara; Chavez, Elizabeth A; Lim, Jamie L P; Ceglia, Nicholas; McPherson, Andrew; Wiens, Matt; Walters, Pascale; Chan, Tim; Hewitson, Brittany; Lai, Daniel; Mottok, Anja; Sarkozy, Clementine; Chong, Lauren; Aoki, Tomohiro; Wang, Xuehai; Weng, Andrew P; McAlpine, Jessica N; Aparicio, Samuel; Steidl, Christian; Campbell, Kieran R; Shah, Sohrab P.

Nat Methods ; 16(10): 1007-1015, 2019 10.

Artículo en Inglés | MEDLINE | ID: mdl-31501550

5.

The Landscape of COVID-19 Research in the United States: a Cross-sectional Study of Randomized Trials Registered on ClinicalTrials.Gov.

Sacks, Chana A; North, Crystal M; Wolf, Molly; Dougan, Michael; Campbell, Kieran R; Moggridge, Jason; Fralick, Michael.

J Gen Intern Med ; 37(1): 154-161, 2022 01.

Artículo en Inglés | MEDLINE | ID: mdl-34755268

6.

Modelling hereditary diffuse gastric cancer initiation using transgenic mouse-derived gastric organoids and single-cell sequencing.

Dixon, Katherine; Brew, Tom; Farnell, David; Godwin, Tanis D; Cheung, Simon; Chow, Christine; Ta, Monica; Ho, Germain; Bui, Minh; Douglas, J Maxwell; Campbell, Kieran R; El-Naggar, Amal; Kaurah, Pardeep; Kalloger, Steve E; Lim, Howard J; Schaeffer, David F; Cochrane, Dawn; Guilford, Parry; Huntsman, David G.

J Pathol ; 254(3): 254-264, 2021 07.

Artículo en Inglés | MEDLINE | ID: mdl-33797756

7.

Single cell transcriptomes of normal endometrial derived organoids uncover novel cell type markers and cryptic differentiation of primary tumours.

Cochrane, Dawn R; Campbell, Kieran R; Greening, Kendall; Ho, Germain C; Hopkins, James; Bui, Minh; Douglas, J Maxwell; Sharlandjieva, Vassilena; Munzur, Asli D; Lai, Daniel; DeGrood, Maya; Gibbard, Evan W; Leung, Samuel; Boyd, Niki; Cheng, Angela S; Chow, Christine; Lim, Jamie Lp; Farnell, David A; Kommoss, Stefan; Kommoss, Friedrich; Roth, Andrew; Hoang, Lien; McAlpine, Jessica N; Shah, Sohrab P; Huntsman, David G.

J Pathol ; 252(2): 201-214, 2020 10.

Artículo en Inglés | MEDLINE | ID: mdl-32686114

8.

A descriptive marker gene approach to single-cell pseudotime inference.

Campbell, Kieran R; Yau, Christopher.

Bioinformatics ; 35(1): 28-35, 2019 01 01.

Artículo en Inglés | MEDLINE | ID: mdl-29939207

9.

Computational modelling in single-cell cancer genomics: methods and future directions.

Zhang, Allen W; Campbell, Kieran R.

Phys Biol ; 17(6): 061001, 2020 09 19.

Artículo en Inglés | MEDLINE | ID: mdl-32759485

10.

switchde: inference of switch-like differential expression along single-cell trajectories.

Campbell, Kieran R; Yau, Christopher.

Bioinformatics ; 33(8): 1241-1242, 2017 04 15.

Artículo en Inglés | MEDLINE | ID: mdl-28011787

11.

Scater: pre-processing, quality control, normalization and visualization of single-cell RNA-seq data in R.

McCarthy, Davis J; Campbell, Kieran R; Lun, Aaron T L; Wills, Quin F.

Bioinformatics ; 33(8): 1179-1186, 2017 04 15.

Artículo en Inglés | MEDLINE | ID: mdl-28088763

12.

Order Under Uncertainty: Robust Differential Expression Analysis Using Probabilistic Models for Pseudotime Inference.

Campbell, Kieran R; Yau, Christopher.

PLoS Comput Biol ; 12(11): e1005212, 2016 Nov.

Artículo en Inglés | MEDLINE | ID: mdl-27870852

13.

The impacts of active and self-supervised learning on efficient annotation of single-cell expression data.

Geuenich, Michael J; Gong, Dae-Won; Campbell, Kieran R.

Nat Commun ; 15(1): 1014, 2024 Feb 03.

Artículo en Inglés | MEDLINE | ID: mdl-38307875

14.

Beyond benchmarking and towards predictive models of dataset-specific single-cell RNA-seq pipeline performance.

Fang, Cindy; Selega, Alina; Campbell, Kieran R.

Genome Biol ; 25(1): 159, 2024 Jun 17.

Artículo en Inglés | MEDLINE | ID: mdl-38886757

15.

Characterizing the impacts of dataset imbalance on single-cell data integration.

Maan, Hassaan; Zhang, Lin; Yu, Chengxin; Geuenich, Michael J; Campbell, Kieran R; Wang, Bo.

Nat Biotechnol ; 2024 Mar 01.

Artículo en Inglés | MEDLINE | ID: mdl-38429430

16.

In vivo CRISPR screens reveal SCAF1 and USP15 as drivers of pancreatic cancer.

Martinez, Sebastien; Wu, Shifei; Geuenich, Michael; Malik, Ahmad; Weber, Ramona; Woo, Tristan; Zhang, Amy; Jang, Gun Ho; Dervovic, Dzana; Al-Zahrani, Khalid N; Tsai, Ricky; Fodil, Nassima; Gros, Philippe; Gallinger, Steven; Neely, G Gregory; Notta, Faiyaz; Sendoel, Ataman; Campbell, Kieran; Elling, Ulrich; Schramek, Daniel.

Nat Commun ; 15(1): 5266, 2024 Jun 20.

Artículo en Inglés | MEDLINE | ID: mdl-38902237

17.

4A after access: a new mnemonic to aid timely administration of IV/IO treatment in trauma patients.

Campbell, Kieran; Scanlon, E; Bhanot, K; Harper, F; Naumann, D N.

BMJ Mil Health ; 2023 Sep 11.

Artículo en Inglés | MEDLINE | ID: mdl-37696654

18.

The Basics of Machine Learning.

Fralick, Michael; Campbell, Kieran R.

NEJM Evid ; 1(5): EVIDe2200062, 2022 May.

Artículo en Inglés | MEDLINE | ID: mdl-38319201

19.

A noncoding single-nucleotide polymorphism at 8q24 drives IDH1-mutant glioma formation.

Yanchus, Connor; Drucker, Kristen L; Kollmeyer, Thomas M; Tsai, Ricky; Winick-Ng, Warren; Liang, Minggao; Malik, Ahmad; Pawling, Judy; De Lorenzo, Silvana B; Ali, Asma; Decker, Paul A; Kosel, Matt L; Panda, Arijit; Al-Zahrani, Khalid N; Jiang, Lingyan; Browning, Jared W L; Lowden, Chris; Geuenich, Michael; Hernandez, J Javier; Gosio, Jessica T; Ahmed, Musaddeque; Loganathan, Sampath Kumar; Berman, Jacob; Trcka, Daniel; Michealraj, Kulandaimanuvel Antony; Fortin, Jerome; Carson, Brittany; Hollingsworth, Ethan W; Jacinto, Sandra; Mazrooei, Parisa; Zhou, Lily; Elia, Andrew; Lupien, Mathieu; He, Housheng Hansen; Murphy, Daniel J; Wang, Liguo; Abyzov, Alexej; Dennis, James W; Maass, Philipp G; Campbell, Kieran; Wilson, Michael D; Lachance, Daniel H; Wrensch, Margaret; Wiencke, John; Mak, Tak; Pennacchio, Len A; Dickel, Diane E; Visel, Axel; Wrana, Jeffrey; Taylor, Michael D.

Science ; 378(6615): 68-78, 2022 10 07.

Artículo en Inglés | MEDLINE | ID: mdl-36201590

20.

Damage control resuscitation and surgery for indigenous combat casualties: a prospective observational study.

Campbell, Kieran; Naumann, D N; Remick, K; Wright, C.

BMJ Mil Health ; 167(1): 18-22, 2021 Feb.

Artículo en Inglés | MEDLINE | ID: mdl-31227598

Portal de Búsqueda de la BVS Enfermería

Información y Conocimiento para la Salud

Configurar filtros

Su selección (0)

Formato de exportación:

Exportar:

Clonal fitness inferred from time-series modelling of single-cell cancer genomes.

Radiomics analysis to predict pulmonary nodule malignancy using machine learning approaches.

Loss of apelin blocks the emergence of sprouting angiogenesis in experimental tumors.

Probabilistic cell-type assignment of single-cell RNA-seq for tumor microenvironment profiling.

The Landscape of COVID-19 Research in the United States: a Cross-sectional Study of Randomized Trials Registered on ClinicalTrials.Gov.

Modelling hereditary diffuse gastric cancer initiation using transgenic mouse-derived gastric organoids and single-cell sequencing.

Single cell transcriptomes of normal endometrial derived organoids uncover novel cell type markers and cryptic differentiation of primary tumours.

A descriptive marker gene approach to single-cell pseudotime inference.

Computational modelling in single-cell cancer genomics: methods and future directions.

switchde: inference of switch-like differential expression along single-cell trajectories.

Scater: pre-processing, quality control, normalization and visualization of single-cell RNA-seq data in R.

Order Under Uncertainty: Robust Differential Expression Analysis Using Probabilistic Models for Pseudotime Inference.

The impacts of active and self-supervised learning on efficient annotation of single-cell expression data.

Beyond benchmarking and towards predictive models of dataset-specific single-cell RNA-seq pipeline performance.

Characterizing the impacts of dataset imbalance on single-cell data integration.

In vivo CRISPR screens reveal SCAF1 and USP15 as drivers of pancreatic cancer.

4A after access: a new mnemonic to aid timely administration of IV/IO treatment in trauma patients.

The Basics of Machine Learning.

A noncoding single-nucleotide polymorphism at 8q24 drives IDH1-mutant glioma formation.

Damage control resuscitation and surgery for indigenous combat casualties: a prospective observational study.