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1.
Proc Natl Acad Sci U S A ; 107(26): 11900-5, 2010 Jun 29.
Article in English | MEDLINE | ID: mdl-20547865

ABSTRACT

In a previous study, we demonstrated that beta1,3-N-acetylglucosaminyltransferase 5 (B3gnt5) is a lactotriaosylceramide (Lc(3)Cer) synthase that synthesizes a precursor structure for lacto/neolacto-series glycosphingolipids (GSLs) in in vitro experiments. Here, we generated B3gnt5-deficient (B3gnt5(-/-)) mice to investigate the in vivo biological functions of lacto/neolacto-series GSLs. In biochemical analyses, lacto/neolacto-series GSLs were confirmed to be absent and no Lc(3)Cer synthase activity was detected in the tissues of these mice. These results demonstrate that beta3GnT5 is the sole enzyme synthesizing Lc(3)Cer in vivo. Ganglioside GM1, known as a glycosphingolipid-enriched microdomain (GEM) marker, was found to be up-regulated in B3gnt5(-/-) B cells by flow cytometry and fluorescence microscopy. However, no difference in the amount of GM1 was observed by TLC-immunoblotting analysis. The GEM-stained puncta on the surface of B3gnt5(-/-) resting B cells were brighter and larger than those of WT cells. These results suggest that structural alteration of GEM occurs in B3gnt5(-/-) B cells. We next examined whether BCR signaling-related proteins, such as BCR, CD19, and the signaling molecule Lyn, had moved into or out of the GEM fraction. In B3gnt5(-/-) B cells, these molecules were enriched in the GEM fraction or adjacent fraction. Moreover, B3gnt5(-/-) B cells were more sensitive to the induction of intracellular phosphorylation signals on BCR stimulation and proliferated more vigorously than WT B cells. Together, these results suggest that lacto/neolacto-series GSLs play an important role in clustering of GEMs and tether-specific proteins, such as BCR, CD19, and related signaling molecules to the GEMs.


Subject(s)
B-Lymphocytes/immunology , B-Lymphocytes/metabolism , Glycosphingolipids/immunology , Glycosphingolipids/metabolism , Membrane Microdomains/immunology , Membrane Microdomains/metabolism , Animals , Base Sequence , DNA Primers/genetics , Female , G(M1) Ganglioside/immunology , G(M1) Ganglioside/metabolism , In Vitro Techniques , Lactosylceramides/metabolism , Lymphocyte Activation , Male , Mice , Mice, Inbred C57BL , Mice, Knockout , Molecular Sequence Data , N-Acetylglucosaminyltransferases/deficiency , N-Acetylglucosaminyltransferases/genetics
2.
J Bioinform Comput Biol ; 2(2): 309-31, 2004 Jun.
Article in English | MEDLINE | ID: mdl-15297984

ABSTRACT

For the purpose of analyzing the relation between the splice sites and the order of introns, we conducted the following analysis for the GT-AG and GC-AG splice site groups. First, the pre-mRNAs of H. sapiens, M. musculus, D. melanogaster, A. thaliana and O. sativa were sampled by mapping the full-length cDNA to the genomes. Next, the consensus sequences at different regions of pre-mRNAs were analyzed in the five species. We also investigated the mononucleotide and dinucleotide frequencies in the extensive regions around the 5' splice sites (5'ss) and 3' splice sites (3'ss). As a result, differential frequencies of nucleotides at the first 5'ss in both the GT-AG and GC-AG splice site groups were observed in A. thaliana and O. sativa pre-mRNAs. The trend, which indicates that GC 5'ss possess strong consensus sequences, was observed not only in mammalian pre-mRNAs but also in the pre-mRNAs of D. melanogaster, A. thaliana and O. sativa. Furthermore, we examined the consensus sequences of the constitutive and alternative splice sites. It was suggested that in the case of the alternative GC-AG introns, the tendency to have a weak consensus sequence at 5'ss is different between H. sapiens and M. musculus pre-mRNAs.


Subject(s)
DNA, Complementary/genetics , Gene Expression Profiling/methods , Introns/genetics , RNA Splice Sites/genetics , Sequence Alignment/methods , Sequence Analysis, DNA/methods , Animals , Arabidopsis/genetics , Base Composition , Consensus Sequence/genetics , Drosophila melanogaster/genetics , Eukaryotic Cells , Gene Frequency , Humans , Mice , Oryza/genetics , Sequence Homology, Nucleic Acid , Species Specificity
3.
Proc Natl Acad Sci U S A ; 104(40): 15829-34, 2007 Oct 02.
Article in English | MEDLINE | ID: mdl-17890318

ABSTRACT

beta1,3-N-acetylglucosaminyltransferase 2 (beta3GnT2) is a polylactosamine synthase that synthesizes a backbone structure of carbohydrate structures onto glycoproteins. Here we generated beta3GnT2-deficient (beta3GnT2(-/-)) mice and showed that polylactosamine on N-glycans was markedly reduced in their immunological tissues. In WT mice, polylactosamine was present on CD28 and CD19, both known immune costimulatory molecules. However, polylactosamine levels on these molecules were reduced in beta3GnT2(-/-) mice. beta3GnT2(-/-) T cells lacking polylactosamine were more sensitive to the induction of intracellular calcium flux on stimulation with anti-CD3epsilon/CD28 and proliferated more strongly than T cells from WT mice. beta3GnT2(-/-) B cells also showed hyperproliferation on BCR stimulation. Macrophages from beta3GnT2(-/-) mice had higher cell surface CD14 levels and enhanced responses to endotoxin. These results indicate that polylactosamine on N-glycans is a putative immune regulatory factor presumably suppressing excessive responses during immune reactions.


Subject(s)
Lymphocyte Activation/genetics , Macrophage Activation/genetics , N-Acetylglucosaminyltransferases/deficiency , T-Lymphocytes/immunology , Amino Sugars/deficiency , Animals , Antigens, CD19/immunology , CD28 Antigens/immunology , Solanum lycopersicum , Mice , Mice, Knockout , Plant Lectins/immunology , Polysaccharides/deficiency , Receptors, Antigen, T-Cell/immunology
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