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1.

Mouse Genome Database (MGD): Knowledgebase for mouse-human comparative biology.

Blake, Judith A; Baldarelli, Richard; Kadin, James A; Richardson, Joel E; Smith, Cynthia L; Bult, Carol J.

Nucleic Acids Res ; 49(D1): D981-D987, 2021 01 08.

Article in English | MEDLINE | ID: mdl-33231642

2.

The mouse Gene Expression Database (GXD): 2021 update.

Baldarelli, Richard M; Smith, Constance M; Finger, Jacqueline H; Hayamizu, Terry F; McCright, Ingeborg J; Xu, Jingxia; Shaw, David R; Beal, Jonathan S; Blodgett, Olin; Campbell, Jeffrey; Corbani, Lori E; Frost, Pete J; Giannatto, Sharon C; Miers, Dave B; Kadin, James A; Richardson, Joel E; Ringwald, Martin.

Nucleic Acids Res ; 49(D1): D924-D931, 2021 01 08.

Article in English | MEDLINE | ID: mdl-33104772

3.

Multiple genome viewer (MGV): a new tool for visualization and comparison of multiple annotated genomes.

Richardson, Joel E; Baldarelli, Richard M; Bult, Carol J.

Mamm Genome ; 33(1): 44-54, 2022 03.

Article in English | MEDLINE | ID: mdl-34448927

4.

Mouse Genome Informatics (MGI): latest news from MGD and GXD.

Ringwald, Martin; Richardson, Joel E; Baldarelli, Richard M; Blake, Judith A; Kadin, James A; Smith, Cynthia; Bult, Carol J.

Mamm Genome ; 33(1): 4-18, 2022 03.

Article in English | MEDLINE | ID: mdl-34698891

5.

The mouse Gene Expression Database (GXD): 2019 update.

Smith, Constance M; Hayamizu, Terry F; Finger, Jacqueline H; Bello, Susan M; McCright, Ingeborg J; Xu, Jingxia; Baldarelli, Richard M; Beal, Jonathan S; Campbell, Jeffrey; Corbani, Lori E; Frost, Pete J; Lewis, Jill R; Giannatto, Sharon C; Miers, Dave; Shaw, David R; Kadin, James A; Richardson, Joel E; Smith, Cynthia L; Ringwald, Martin.

Nucleic Acids Res ; 47(D1): D774-D779, 2019 01 08.

Article in English | MEDLINE | ID: mdl-30335138

6.

The mouse Gene Expression Database (GXD): 2017 update.

Finger, Jacqueline H; Smith, Constance M; Hayamizu, Terry F; McCright, Ingeborg J; Xu, Jingxia; Law, Meiyee; Shaw, David R; Baldarelli, Richard M; Beal, Jon S; Blodgett, Olin; Campbell, Jeff W; Corbani, Lori E; Lewis, Jill R; Forthofer, Kim L; Frost, Pete J; Giannatto, Sharon C; Hutchins, Lucie N; Miers, Dave B; Motenko, Howie; Stone, Kevin R; Eppig, Janan T; Kadin, James A; Richardson, Joel E; Ringwald, Martin.

Nucleic Acids Res ; 45(D1): D730-D736, 2017 01 04.

Article in English | MEDLINE | ID: mdl-27899677

7.

Orthology for comparative genomics in the mouse genome database.

Dolan, Mary E; Baldarelli, Richard M; Bello, Susan M; Ni, Li; McAndrews, Monica S; Bult, Carol J; Kadin, James A; Richardson, Joel E; Ringwald, Martin; Eppig, Janan T; Blake, Judith A.

Mamm Genome ; 26(7-8): 305-13, 2015 Aug.

Article in English | MEDLINE | ID: mdl-26223881

8.

Mouse Genome Informatics: an integrated knowledgebase system for the laboratory mouse.

Baldarelli, Richard M; Smith, Cynthia L; Ringwald, Martin; Richardson, Joel E; Bult, Carol J.

Genetics ; 227(1)2024 May 07.

Article in English | MEDLINE | ID: mdl-38531069

9.

Drug discovery: In defence of the animal model.

Baldarelli, Richard M.

Nature ; 485(7398): 309, 2012 May 16.

Article in English | MEDLINE | ID: mdl-22596144

10.

GXD's RNA-Seq and Microarray Experiment Search: using curated metadata to reliably find mouse expression studies of interest.

Smith, Constance M; Kadin, James A; Baldarelli, Richard M; Beal, Jonathan S; Blodgett, Olin; Giannatto, Sharon C; Richardson, Joel E; Ringwald, Martin.

Database (Oxford) ; 20202020 01 01.

Article in English | MEDLINE | ID: mdl-32140729

11.

Mammalian septins nomenclature.

Macara, Ian G; Baldarelli, Richard; Field, Christine M; Glotzer, Michael; Hayashi, Yasuhide; Hsu, Shu-Chan; Kennedy, Mary B; Kinoshita, Makoto; Longtine, Mark; Low, Claudia; Maltais, Lois J; McKenzie, Louise; Mitchison, Timothy J; Nishikawa, Toru; Noda, Makoto; Petty, Elizabeth M; Peifer, Mark; Pringle, John R; Robinson, Phillip J; Roth, Dagmar; Russell, S E Hilary; Stuhlmann, Heidi; Tanaka, Manami; Tanaka, Tomoo; Trimble, William S; Ware, Jerry; Zeleznik-Le, Nancy J; Zieger, Barbara.

Mol Biol Cell ; 13(12): 4111-3, 2002 Dec.

Article in English | MEDLINE | ID: mdl-12475938

12.

CDS annotation in full-length cDNA sequence.

Furuno, Masaaki; Kasukawa, Takeya; Saito, Rintaro; Adachi, Jun; Suzuki, Harukazu; Baldarelli, Richard; Hayashizaki, Yoshihide; Okazaki, Yasushi.

Genome Res ; 13(6B): 1478-87, 2003 Jun.

Article in English | MEDLINE | ID: mdl-12819146

13.

Development and evaluation of an automated annotation pipeline and cDNA annotation system.

Kasukawa, Takeya; Furuno, Masaaki; Nikaido, Itoshi; Bono, Hidemasa; Hume, David A; Bult, Carol; Hill, David P; Baldarelli, Richard; Gough, Julian; Kanapin, Alexander; Matsuda, Hideo; Schriml, Lynn M; Hayashizaki, Yoshihide; Okazaki, Yasushi; Quackenbush, John.

Genome Res ; 13(6B): 1542-51, 2003 Jun.

Article in English | MEDLINE | ID: mdl-12819153

14.

Connecting sequence and biology in the laboratory mouse.

Baldarelli, Richard M; Hill, David P; Blake, Judith A; Adachi, Jun; Furuno, Masaaki; Bradt, Dirck; Corbani, Lori E; Cousins, Sharon; Frazer, Kenneth S; Qi, Dong; Yang, Longlong; Ramachandran, Sridhar; Reed, Deborah; Zhu, Yunxia; Kasukawa, Takeya; Ringwald, Martin; King, Benjamin L; Maltais, Lois J; McKenzie, Louise M; Schriml, Lynn M; Maglott, Donna; Church, Deanna M; Pruitt, Kim; Eppig, Janan T; Richardson, Joel E; Kadin, Jim A; Bult, Carol J.

Genome Res ; 13(6B): 1505-19, 2003 Jun.

Article in English | MEDLINE | ID: mdl-12819150

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