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1.
Anim Genet ; 54(4): 536-543, 2023 Aug.
Article in English | MEDLINE | ID: mdl-36990727

ABSTRACT

Horns, a form of headgear carried by Bovidae, have ethical and economic implications for ruminant production species such as cattle and goats. Hornless (polled) individuals are preferred. In cattle, four genetic variants (Celtic, Friesian, Mongolian and Guarani) are associated with the polled phenotype, which are clustered in a 300-kb region on chromosome 1. As the variants are intergenic, the functional effect is unknown. The aim of this study was to determine if the POLLED variants affect chromatin structure or disrupt enhancers using publicly available data. Topologically associating domains (TADs) were analyzed using Angus- and Brahman-specific Hi-C reads from lung tissue of an Angus (Celtic allele) cross Brahman (horned) fetus. Predicted bovine enhancers and chromatin immunoprecipitation sequencing peaks for histone modifications associated with enhancers (H3K27ac and H3K4me1) were mapped to the POLLED region. TADs analyzed from Angus- and Brahman-specific Hi-C reads were the same, therefore, the Celtic variant does not appear to affect this level of chromatin structure. The Celtic variant is located in a different TAD from the Friesian, Mongolian, and Guarani variants. Predicted enhancers and histone modifications overlapped with the Guarani and Friesian variants but not the Celtic or Mongolian variants. This study provides insight into the mechanisms of the POLLED variants for disrupting horn development. These results should be validated using data produced from the horn bud region of horned and polled bovine fetuses.


Subject(s)
Horns , Cattle/genetics , Animals , Mutation , Phenotype , Alleles , Goats/genetics , Chromatin
2.
J Dairy Sci ; 104(8): 9063-9081, 2021 Aug.
Article in English | MEDLINE | ID: mdl-33934854

ABSTRACT

Selective use of antibiotic dry cow treatment can be implemented at the cow or quarter level, with the latter having the potential to further reduce antibiotic use. Our objective was to compare these 2 approaches in 6 herds in the United Kingdom in which environmental mastitis predominated. Eight hundred seven cows were enrolled and categorized as having a high cell count (n = 401) or low cell count (n = 406) in the last 3 mo of lactation and clinical mastitis history. All quarters of all enrolled cows received an internal teat sealant. Within each category, cows were randomly allocated to 1 of 3 groups; in one group antibiotic treatment was allocated at cow level (i.e., all 4 quarters received antibiotic), whereas in the 2 remaining groups antibiotic treatment was allocated at quarter level, based on California Mastitis Test (CMT) findings. Two different thresholds, score 1 and 2, were used to determine likely infection status. Quarter milk samples were collected at dry off and postcalving for bacteriological culture and somatic cell count (SCC). Cows were monitored for clinical mastitis from dry off until 100 d in milk. Cow level SCC and milk yield data were collated from farm records. Within each category, the 2 quarter level treatment groups were compared with cow level treatment at dry off. Leaving quarters untreated with intramammary antibiotic in cows in the high cell count group, with a CMT <2 or <1, reduced antibiotic use by 55% and 31%, respectively, and resulted in no difference in the odds of being infected with any pathogen postcalving, but was associated with a higher SCC at the first test day. Intramammary antibiotic treatment of quarters with a CMT ≥1 in cows in the low cell count category at dry off was not associated with any reduction in the odds of being infected with a major pathogen postcalving but was associated with a decrease in the odds of being infected with a minor mastitis pathogen postcalving. The use of antibiotics in quarters of cows categorized as low cell count at dry off, increased the proportion of quarters treated with antibiotic from 0% at cow level to 31% (CMT ≥ 1) and 12% (CMT ≥ 2) at quarter level, only resulting in a reduction in SCC of around 20,000 cells/mL at the first test day, if all quarters with CMT score ≥1 were treated with antibiotic. No differences in clinical mastitis incidence and milk yield in the first 100 d in milk were detected between any of the treatment groups. These study findings support selective quarter level dry off treatment only in cows with cow level SCC >200,000 cells/mL at dry off.


Subject(s)
Cattle Diseases , Mastitis, Bovine , Mastitis , Animals , Anti-Bacterial Agents/therapeutic use , California , Cattle , Cattle Diseases/drug therapy , Cell Count/veterinary , Female , Lactation , Mammary Glands, Animal , Mastitis/drug therapy , Mastitis/veterinary , Mastitis, Bovine/drug therapy , Milk , United Kingdom
3.
Reprod Fertil Dev ; 31(4): 724-734, 2019 Apr.
Article in English | MEDLINE | ID: mdl-30482269

ABSTRACT

Haemoglobin expression is not restricted to erythroid cells. We investigated the gene expression of the haemoglobin subunits haemoglobin, alpha adult chain 1 (Hba-a1) and haemoglobin, beta (Hbb), 2,3-bisphosphoglycerate mutase (Bpgm) and the oxygen-regulated genes BCL2/adenovirus E1B interacting protein 3 (Bnip3), solute carrier family 2 (facilitated glucose transporter), member 1 (Slc2a1) and N-myc downstream regulated gene 1 (Ndrg1) in the murine preimplantation embryo, comparing invivo to invitro gene expression. Relatively high levels of Hba-a1 and Hbb were expressed invivo from the 2-cell to blastocyst stage; in contrast, little or no expression occurred invitro. We hypothesised that the presence of haemoglobin invivo creates a low oxygen environment to induce oxygen-regulated gene expression, supported by high expression of Slc2a1 and Ndrg1 in invivo relative to invitro embryos. In addition, analysis of an invitro-derived human embryo gene expression public dataset revealed low expression of haemoglobin subunit alpha (HBA) and HBB, and high expression of BPGM. To explore whether there was a developmental stage-specific effect of haemoglobin, we added exogenous haemoglobin either up to the 4-cell stage or throughout development to the blastocyst stage, but observed no difference in blastocyst rate or the inner cell mass to trophectoderm cell ratio. We conclude that haemoglobin in the invivo preimplantation embryo raises an interesting premise of potential mechanisms for oxygen regulation, which may influence oxygen-regulated gene expression.


Subject(s)
Blastocyst/metabolism , Gene Expression Regulation, Developmental , Hemoglobins/metabolism , Oxygen/metabolism , Animals , Embryo Culture Techniques , Embryonic Development , Female , Hemoglobins/genetics , Mice
4.
J Exp Bot ; 68(7): 1519-1529, 2017 03 01.
Article in English | MEDLINE | ID: mdl-28369427

ABSTRACT

The tiller inhibition gene (tin) that reduces tillering in wheat (Triticum aestivum) is also associated with large spikes, increased grain weight, and thick leaves and stems. In this study, comparison of near-isogenic lines (NILs) revealed changes in stem morphology, cell wall composition, and stem strength. Microscopic analysis of stem cross-sections and chemical analysis of stem tissue indicated that cell walls in tin lines were thicker and more lignified than in free-tillering NILs. Increased lignification was associated with stronger stems in tin plants. A candidate gene for tin was identified through map-based cloning and was predicted to encode a cellulose synthase-like (Csl) protein with homology to members of the CslA clade. Dinucleotide repeat-length polymorphism in the 5'UTR region of the Csl gene was associated with tiller number in diverse wheat germplasm and linked to expression differences of Csl transcripts between NILs. We propose that regulation of Csl transcript and/or protein levels affects carbon partitioning throughout the plant, which plays a key role in the tin phenotype.


Subject(s)
Glucosyltransferases/genetics , Plant Proteins/genetics , Plant Stems/growth & development , Triticum/genetics , Cell Wall/chemistry , Glucosyltransferases/metabolism , Plant Proteins/metabolism , Plant Stems/genetics , Triticum/growth & development , Triticum/metabolism
5.
J Intellect Disabil Res ; 61(6): 580-593, 2017 06.
Article in English | MEDLINE | ID: mdl-28150394

ABSTRACT

BACKGROUND: A proportion of young people with autism are reported to show catatonic-like symptoms in adolescence. The aetiology and prevalence of such presentations is unknown but include a set of behaviours that can best be described as attenuated. METHOD: The current study empirically investigated the presence and nature of such attenuated behaviours in children and adolescents with autism using a newly developed 34-item third party report measure, the Attenuated Behaviour Questionnaire. Caregivers or parents of young people with autism reported on the presentation of symptoms via the online completion of the Attenuated Behaviour Questionnaire and two established clinical measures of repetitive behaviour and depression. RESULTS: Initial results indicate that the Attenuated Behaviour Questionnaire is a workable clinical measure in this population with a degree of discriminant validity with regard to catatonia. Attenuated behaviour indicative of catatonia was relatively common in young people with autism with up to 20.2% having an existing diagnosis of catatonia and evidence of a relationship between attenuated behaviours and measures of depression and repetitive and restricted behaviours. CONCLUSION: Catatonic symptoms are more prevalent in young people with autism than previously thought, and the Attenuated Behaviour Questionnaire has potential as a clinical and research tool.


Subject(s)
Autism Spectrum Disorder , Catatonia , Adolescent , Adult , Autism Spectrum Disorder/complications , Autism Spectrum Disorder/epidemiology , Autism Spectrum Disorder/physiopathology , Catatonia/epidemiology , Catatonia/etiology , Catatonia/physiopathology , Child , Female , Humans , Male , Prevalence , Psychiatric Status Rating Scales , Young Adult
6.
Phys Chem Chem Phys ; 17(38): 25342-53, 2015 Oct 14.
Article in English | MEDLINE | ID: mdl-26356272

ABSTRACT

The OH initiated gas-phase chemistry of several amines that are potential candidates for use in post-combustion carbon capture (PCCC) plants have been studied by laser flash photolysis with OH monitored by laser induced fluorescence. The rate coefficients for the reaction of OH with N-methylethanolamine (MMEA) and N,N-dimethylethanolamine (DMEA) have been measured as a function of temperature (∼300-500 K): k(OH+MMEA) = (8.51 ± 0.65) × 10(-11)(T/298)(-(0.79±0.22), k(OH+DMEA) = (6.85 ± 0.25) × 10(-11)(T/298)(-(0.44±0.12). The results for DMEA lie between previous values. This is the first kinetic study of the OH + MMEA reaction. At low pressures in the presence of oxygen, OH is recycled in the DMEA reaction as has been observed for other tertiary amines. Branching ratios for OH abstraction with MEA, DMEA and MMEA are dominated by abstraction from the αCH2 group. Abstraction from N-H is determined to be 0.38 ± 0.06 for MEA and 0.52 ± 0.06 for MMEA at 298 K. The impact of these studies has been assessed by using a modified chemical box model to calculate downwind concentrations of nitramines and nitrosamine formed in the photo-oxidation of MEA. Under clear sky conditions, the simulations suggest that current safe guidelines for nitramines may be significantly exceeded with predicted MEA emission rates.

7.
J Dairy Sci ; 98(3): 1706-20, 2015 Mar.
Article in English | MEDLINE | ID: mdl-25529419

ABSTRACT

Vaccination can play a useful role in mastitis control programs, although there is a relative dearth of large, well-controlled field efficacy studies. This paper presents the findings on the use of a commercially available vaccine (Startvac, Hipra UK Ltd., Nottingham, UK) on commercial units under UK field conditions. In total, 3,130 cows were recruited from 7 farms and were randomly allocated, within farm, to 1 of 3 groups. The first group received the vaccine following the label regimen, the second group was vaccinated every 90 d following an initial vaccination course, and the third group was left unvaccinated to act as controls. Vaccine efficacy was assessed in the first 120 d of lactation. Data were available for analysis from 1,696 lactations in 1,549 cows. In total, 779 cases of clinical mastitis occurred in the 3 study groups, and we detected no significant difference in the incidence or prevalence of clinical or subclinical mastitis between any of the 3 groups. Mastitis vaccination following the label regimen was associated with a significant reduction in the severity of clinical cases. Cows in this group were at significantly decreased odds of developing clinical mastitis presenting with more than just milk changes [odds ratio: 0.58; 95% confidence interval (CI): 0.35-0.98]. Similarly, each additional vaccination resulted in a cow being at decreased odds of developing clinical mastitis presenting with more than just milk changes (odds ratio: 0.87; 95% CI: 0.77-0.98). Although no cows were culled because of severe mastitis in either of the vaccinated groups, we detected no significant difference in the mastitis-related culling rate between groups. Analysis of milk production data demonstrated that, on average, cows on the label regimen produced a higher volume of milk (231 L; 95% CI: 104.1-357.4) and more milk solids (12.36 kg; 95% CI: 3.12-21.60) than unvaccinated cows in the first 120 d of lactation. Conservative analysis suggested that a return on investment of 2.57:1 could be expected under UK conditions based on increased milk yield alone.


Subject(s)
Bacterial Vaccines/immunology , Escherichia coli Infections/veterinary , Escherichia coli/immunology , Mastitis, Bovine/prevention & control , Staphylococcal Infections/veterinary , Staphylococcus aureus/immunology , Vaccination/veterinary , Animals , Bacterial Vaccines/administration & dosage , Cattle , Escherichia coli Infections/microbiology , Escherichia coli Infections/prevention & control , Female , Mastitis, Bovine/microbiology , Staphylococcal Infections/microbiology , Staphylococcal Infections/prevention & control , Time Factors , United Kingdom , Vaccines, Inactivated/administration & dosage
8.
J Dairy Sci ; 95(7): 3683-97, 2012 Jul.
Article in English | MEDLINE | ID: mdl-22720926

ABSTRACT

The objective of this research was to evaluate the relationship between udder health and reproductive performance in UK dairy cows. Data from 80 herds were restructured such that each unit of data represented a 2-d period during lactation where a cow was at risk of becoming pregnant. Multilevel discrete-time survival models were then used within a Bayesian framework to explore associations between reproductive outcomes and a variety of potential explanatory variables. Separate models were constructed using 2 different univariate binary outcomes: a cow becoming pregnant during a risk period and a cow becoming pregnant as a result of a given service. Potential explanatory variables included occurrence of clinical mastitis and a categorical representation of individual cow somatic cell count (SCC), both at a variety of timings relative to the risk period. Posterior predictions were used to assess model fit and to check model building assumptions. These demonstrated that the model represented the data well. Within-sample Monte Carlo simulation (i.e., use of the model to predict outcomes for cases within the data set, repeated over a large number of iterations) was used to illustrate results as posterior predicted relative risks. A negative association was found between reproductive performance and cases of clinical mastitis over a wide time frame relative to the risk period (from 28 d before to 70 d after the risk period). A similar negative association with the probability of a service leading to a pregnancy (pregnancy rate) was observed over the same time frame. Higher SCC recordings (i.e., those more likely to be associated with an intramammary infection) were also associated with decreased reproductive performance, especially where an individual cow SCC of greater than 399,000/mL was recorded in the 30 d following a risk period or service. This research demonstrates that both clinical and subclinical mastitis are associated with a reduction in reproductive performance, and that this influence varies in magnitude but can be exerted over a prolonged period.


Subject(s)
Cattle/physiology , Mastitis, Bovine/complications , Pregnancy, Animal/physiology , Animals , Cell Count/veterinary , Female , Lactation/physiology , Mammary Glands, Animal/microbiology , Mammary Glands, Animal/physiology , Mastitis, Bovine/physiopathology , Milk/cytology , Pregnancy , Pregnancy Outcome , Risk Factors
9.
Prev Med Rep ; 30: 101988, 2022 Dec.
Article in English | MEDLINE | ID: mdl-36164507

ABSTRACT

In this project we examine whether homicide 'clusters together' with other adverse health outcomes in the Netherlands, focusing on child mortality, suicide, sexual risk behavior, and substance abuse. We expect moderate-to-strong correlations between homicide and the other adverse health phenomena (hypothesis 1). Further, we expect that these correlations will be reduced when social disorganization is controlled for (hypothesis 2). The study used population-level data between the years 1996 and 2019, for each of the 40 local regions of the Netherlands. We applied a multilevel correlation procedure to evaluate correlations between homicide and the other adverse health outcomes. Correlations between homicide and the other adverse health outcomes were modest. That is, we found only limited evidence for clustering between homicide and the other adverse health outcomes. The patterns of clustering that did occur, suggested that social disorganization in the region promotes risk-taking behaviors in the population, which ultimately increases rates of homicide, abuse of illegal drugs and births to adolescent parents. Project materials, syntax and supplementary information can be found on the Open Science Framework at https://osf.io/jd5yu/.

10.
Theor Appl Genet ; 122(4): 735-44, 2011 Mar.
Article in English | MEDLINE | ID: mdl-21060985

ABSTRACT

The stem rust resistance gene Sr2 has provided broad-spectrum protection against stem rust (Puccinia graminis Pers. f. sp. tritici) since its wide spread deployment in wheat from the 1940s. Because Sr2 confers partial resistance which is difficult to select under field conditions, a DNA marker is desirable that accurately predicts Sr2 in diverse wheat germplasm. Using DNA sequence derived from the vicinity of the Sr2 locus, we developed a cleaved amplified polymorphic sequence (CAPS) marker that is associated with the presence or absence of the gene in 115 of 122 (95%) diverse wheat lines. The marker genotype predicted the absence of the gene in 100% of lines which were considered to lack Sr2. Discrepancies were observed in lines that were predicted to carry Sr2 but failed to show the CAPS marker. Given the high level of accuracy observed, the marker provides breeders with a selection tool for one of the most important disease resistance genes of wheat.


Subject(s)
Basidiomycota/physiology , Genes, Plant/genetics , Genetic Techniques , Immunity, Innate/genetics , Plant Diseases/immunology , Plant Stems/microbiology , Triticum/genetics , Alleles , Base Sequence , Genetic Markers/genetics , Molecular Sequence Data , Plant Diseases/genetics , Plant Diseases/microbiology , Plant Stems/genetics , Polymorphism, Single Nucleotide/genetics , Seeds/genetics , Sequence Alignment , Triticum/immunology , Triticum/microbiology
11.
Theor Appl Genet ; 123(4): 615-23, 2011 Aug.
Article in English | MEDLINE | ID: mdl-21573954

ABSTRACT

Sr2 is the only known durable, race non-specific adult plant stem rust resistance gene in wheat. The Sr2 gene was shown to be tightly linked to the leaf rust resistance gene Lr27 and to powdery mildew resistance. An analysis of recombinants and mutants suggests that a single gene on chromosome arm 3BS may be responsible for resistance to these three fungal pathogens. The resistance functions of the Sr2 locus are compared and contrasted with those of the adult plant resistance gene Lr34.


Subject(s)
Ascomycota/pathogenicity , Basidiomycota/pathogenicity , Disease Resistance , Plant Diseases/genetics , Plant Leaves/genetics , Triticum/genetics , Ascomycota/growth & development , Basidiomycota/growth & development , Chromosome Mapping , Chromosomes, Plant/genetics , Crosses, Genetic , Genes, Plant , Genetic Loci , Phenotype , Plant Diseases/immunology , Plant Diseases/microbiology , Plant Immunity , Plant Leaves/immunology , Plant Leaves/microbiology , Triticum/immunology , Triticum/microbiology
12.
J Dairy Sci ; 94(2): 692-704, 2011 Feb.
Article in English | MEDLINE | ID: mdl-21257038

ABSTRACT

The dry period is a critical time in the lactation cycle, offering the optimum time for cure of existing intramammary infection (IMI), while also encompassing the periods of highest susceptibility to new intramammary infection. Until recent years, intramammary infection in the dry period has been controlled with the use of antibiotic dry cow therapy. The aim of this study was to investigate 3 different dry cow therapy regimens, in low-somatic cell count (SCC; bulk milk SCC<250,000 cells/mL) herds in southwest England. A total of 489 cows was recruited to the study and randomly allocated to receive either the broad-spectrum antibiotic cefquinome, a combination treatment comprising the narrow-spectrum antibiotic cloxacillin and an internal teat sealant, or the narrow-spectrum antibiotic cloxacillin alone. All quarters were sampled for bacteriology at drying off and again in the week immediately postcalving; 2 quarters were also sampled 2 wk before the estimated calving date to allow an assessment of infection dynamics during the dry period. Quarters were subsequently monitored for clinical mastitis for the first 100 d of lactation. Conventional multilevel (random effects) models were constructed to assess the efficacy of products in preventing IMI. Survival analysis was used to examine factors that influenced the risk of clinical mastitis using conventional Cox proportional hazards models. No differences were identified between the treatment groups in terms of cure of IMI caused by the major pathogens. Quarters in both the combination and cefquinome-treated groups were more likely to be free of a major pathogen or enterobacterial pathogen postcalving. With respect to clinical mastitis, the cefquinome-treated group was less likely to develop clinical mastitis than was the cloxacillin treated group.


Subject(s)
Anti-Bacterial Agents/therapeutic use , Bacterial Infections/veterinary , Cephalosporins/therapeutic use , Cloxacillin/therapeutic use , Mammary Glands, Animal/microbiology , Mastitis, Bovine/prevention & control , Animals , Bacterial Infections/prevention & control , Cattle , Cell Count/veterinary , Drug Therapy, Combination/veterinary , Female , Lactation , Mammary Glands, Animal/physiology , Milk/cytology , Postpartum Period , Random Allocation
13.
J Dairy Sci ; 93(4): 1566-77, 2010 Apr.
Article in English | MEDLINE | ID: mdl-20338434

ABSTRACT

The dry period is a critical time in the lactation cycle, being the optimum time to cure existing intramammary infection (IMI) as well as encompassing the periods of highest susceptibility to new infection. Currently, IMI in the dry period is controlled with antibiotic dry cow therapy. The aim of this randomized control trial was to investigate different dry cow therapy regimens by stratifying cows by likely infection status at drying off in herds with low somatic cell count (SCC; bulk milk SCC <250,000 cells/mL) in southwest England. All quarters in 890 cows were recruited. The recruited cows were categorized as either infected or uninfected on the basis of SCC and clinical mastitis history. Ipsilateral quarters within each cow were randomly allocated to receive 1 of 4 different treatment regimens according to their infection category. Quarters in high-SCC infected cows were allocated to receive antibiotic dry cow therapy either alone or in combination with an internal teat sealant; quarters in low-SCC uninfected cows were allocated to receive teat sealant either alone or in combination with antibiotic dry cow therapy. All quarters were sampled for bacteriology at drying off and again within 10 d post-calving. Quarters were subsequently monitored for clinical mastitis for the first 100 d of lactation. The mass of residual sealant was assessed immediately post-calving to allow assessment of the association of sealant retention with treatment efficacy. Models were constructed to assess the efficacy of the different regimens in preventing IMI. Apparent cure rates of existing IMI with major pathogens were consistently >90% in quarters receiving antibiotic. Combination treatment of high-SCC infected cows resulted in an increased likelihood of being pathogen free post-calving (odds ratio=1.40; 95% credibility interval=1.03-1.90). The benefits of combination treatment of low-SCC uninfected cows were less clear. With respect to clinical mastitis, combination treatment of high-SCC infected cows resulted in a decreased likelihood of developing clinical mastitis in the first 100 d of the subsequent lactation (odds ratio=0.68; 95% credibility interval=0.48-0.98). The retention of the internal sealant was adversely affected by its use in combination with antibiotic dry cow therapy.


Subject(s)
Anti-Bacterial Agents/administration & dosage , Cephalosporins/administration & dosage , Mammary Glands, Animal/microbiology , Mastitis, Bovine/prevention & control , Animals , Anti-Bacterial Agents/therapeutic use , Bacterial Infections/prevention & control , Bacterial Infections/veterinary , Cattle , Cephalosporins/therapeutic use , Female , Lactation , Mammary Glands, Animal/physiology , Milk/cytology , Postpartum Period , Random Allocation
14.
J Dairy Sci ; 92(6): 2551-61, 2009 Jun.
Article in English | MEDLINE | ID: mdl-19447987

ABSTRACT

Quarter and cow risk factors associated with the development of clinical mastitis (CM) during lactation were investigated during a 12-mo longitudinal study on 8 commercial Holstein-Friesian dairy farms in the southwest of England. The individual risk factors studied on 1,677 cows included assessments of udder and leg hygiene, teat-end callosity, and hyperkeratosis; body condition score; and measurements of monthly milk quality and yield. Several outcome variables for CM were used for statistical analysis, which included use of generalized linear mixed models. Significant covariates associated with an increased risk of CM were increasing parity, decreasing month of lactation, cows with very dirty udders, and quarters with only very severe hyperkeratosis of the teat-end. Thin and moderate smooth teat-end callosity scores were not associated with an increased risk for CM. Cows that recorded a somatic cell count >199,000 cells/mL and a milk protein percentage <3.2 at the first milk recording after calving were significantly more likely to develop CM after the first 30 d of lactation. There was no association between cow body condition score and incidence of CM. Of the cases of CM available for culture, 171 (26.7%) were confirmed as being caused by Escherichia coli and 121 (18.9%) confirmed as being caused by Streptococcus uberis. Quarters with moderate and very severe hyperkeratosis of the teat-end were at significantly increased risk of clinical E. coli mastitis before the next visit. Quarters with very severe hyperkeratosis of the teat-end were significantly more likely to develop clinical Strep. uberis mastitis before the next visit. There were strong trends within the data to suggest an association between very dirty udders (an increased risk of clinical E. coli mastitis) and teat-ends with no callosity ring present (an increased risk of clinical Strep. uberis mastitis). These results highlight the importance of individual quarter- and cow-level risk factors in determining the risk of CM associated with environmental pathogens during lactation.


Subject(s)
Dairying , Escherichia coli Infections/veterinary , Mastitis, Bovine/epidemiology , Streptococcal Infections/veterinary , Animals , Cattle , Escherichia coli/isolation & purification , Escherichia coli Infections/epidemiology , Female , Hygiene , Lactation , Mammary Glands, Animal/microbiology , Mammary Glands, Animal/pathology , Mastitis, Bovine/diagnosis , Mastitis, Bovine/microbiology , Milk/chemistry , Milk/cytology , Milk Proteins/analysis , Parity , Pregnancy , Risk Factors , Streptococcal Infections/epidemiology , Streptococcus/isolation & purification , United Kingdom
15.
J Dairy Sci ; 92(7): 3106-15, 2009 Jul.
Article in English | MEDLINE | ID: mdl-19528588

ABSTRACT

Quarter and cow risk factors associated with a somatic cell count (SCC) >199,000 cells/mL at the next milk recording during lactation were investigated during a 12-mo longitudinal study on 8 commercial Holstein-Friesian dairy herds in Southwest England, United Kingdom. The individual risk factors studied on 1,677 cows included assessments of udder and leg hygiene, teat-end callosity and hyperkeratosis, body condition score (BCS), and measurements of monthly milk quality and yield. The outcome variable used for statistical analysis was the next recorded individual cow SCC >199,000 cells/mL. Statistical analysis included use of generalized linear mixed models. Significant covariates associated with an increased risk of SCC >199,000 cells/mL were increasing parity, increasing month of lactation, previous SCC (SCC 200,000 cells/mL and greater, odds ratio = 7.12), and cows with a BCS <1.5 (odds ratio = 2.09) or BCS >3.5 (odds ratio = 2.20). Significant covariates associated with a reduced risk of SCC >199,000 cells/mL were cows with contamination of the skin of the udder and quarters with mild (odds ratio = 0.65) and moderate (odds ratio = 0.62) hyperkeratosis of the teat-end. These results suggest that individual quarter and cow-level factors are important in the acquisition of intramammary infections as measured by SCC during lactation. Cow energy status, as measured by BCS, may influence the risk of intramammary infection during lactation.


Subject(s)
Dairying , Mastitis, Bovine/microbiology , Milk/cytology , Animals , Body Constitution , Cattle , Cell Count , Female , Hygiene , Lactation/physiology , Mammary Glands, Animal/physiology , Mastitis, Bovine/epidemiology , Risk Factors , United Kingdom/epidemiology
16.
Tenn Med ; 102(3): 33-5, 42, 2009 Mar.
Article in English | MEDLINE | ID: mdl-19354058

ABSTRACT

BACKGROUND: The new Human Papillomavirus (HPV) vaccine is targeted to pre-adolescents; therefore pediatric providers will be its most frequent supplier. METHODS: A survey focusing on physician knowledge and opinions about sexually transmitted infections (STIs) and the HPV vaccine was distributed to pediatric providers in Chattanooga, TN. RESULTS: Response rate of 171 distributed surveys was 59 percent. Most doctors rated their STI knowledge base as adequate (93 percent), felt comfortable counseling on STIs (80 percent), and felt comfortable counseling about the vaccine and administering it (78 percent). Most also felt the vaccine should be incorporated into the current pediatric vaccination schedule (63 percent) eventually for males and (females (63 percent), aged 10-14 years (54 percent). While four percent of respondents felt this vaccine might promote a false sense of security against STIs, none felt it would promote promiscuity. CONCLUSION: Most surveyed providers feel comfortable counseling their patients about STIs and support the current recommendations for the HPV vaccine.


Subject(s)
Attitude of Health Personnel , Clinical Competence/statistics & numerical data , Health Knowledge, Attitudes, Practice , Papillomavirus Infections/prevention & control , Papillomavirus Vaccines , Physicians/statistics & numerical data , Sexually Transmitted Diseases, Viral/prevention & control , Adolescent , Child , Female , Health Care Surveys , Humans , Male , Papillomavirus Infections/epidemiology , Pediatrics/standards , Sexually Transmitted Diseases, Viral/epidemiology , Surveys and Questionnaires , Tennessee/epidemiology
17.
Sci Rep ; 9(1): 11966, 2019 08 19.
Article in English | MEDLINE | ID: mdl-31427604

ABSTRACT

Progesterone receptor (PGR) co-ordinately regulates ovulation, fertilisation and embryo implantation through tissue-specific actions, but the mechanisms for divergent PGR action are poorly understood. Here we characterised PGR activity in mouse granulosa cells using combined ChIP-seq for PGR and H3K27ac and gene expression microarray. Comparison of granulosa, uterus and oviduct PGR-dependent genes showed almost complete tissue specificity in PGR target gene profiles. In granulosa cells 82% of identified PGR-regulated genes bound PGR within 3 kb of the gene and PGR binding sites were highly enriched in proximal promoter regions in close proximity to H3K27ac-modified active chromatin. Motif analysis showed highly enriched PGR binding to the PGR response element (GnACAnnnTGTnC), but PGR also interacted significantly with other transcription factor binding motifs. In uterus PGR showed far more tendency to bind intergenic chromatin regions and low evidence of interaction with other transcription factors. This is the first genome-wide description of PGR action in granulosa cells and systematic comparison of diverse PGR action in different reproductive tissues. It clarifies finely-tuned contextual PGR-chromatin interactions with implications for more targeted reproductive medicine.


Subject(s)
Chromatin/genetics , Chromatin/metabolism , Gene Expression Regulation , Progesterone/metabolism , Receptors, Progesterone/metabolism , Base Sequence , Binding Sites , Female , Granulosa Cells/metabolism , Histones/metabolism , Humans , Nucleotide Motifs , Organ Specificity , Ovary/metabolism , Ovulation/genetics , Position-Specific Scoring Matrices , Protein Binding , Response Elements
18.
Vet Rec ; 163(19): 566-70, 2008 Nov 08.
Article in English | MEDLINE | ID: mdl-18997186

ABSTRACT

The California mastitis test (CMT) is used on farms to identify subclinical mastitis by an indirect estimation of the somatic cell count (SCC) in milk. Four commercially available detergents were compared with a bespoke cmt fluid for their ability to detect milk samples with a scc above 200,000 cells/ml; differences between the interpretation of the results of the tests by eight operators were also investigated. The sensitivity and specificity of the test were affected by the type of detergent, and by the operators' interpretations. When used by the most sensitive operator, suitably diluted Fairy Liquid performed almost identically to cmt fluid in identifying milk samples with more than 200,000 cells/ml. The average sensitivities achieved by the eight operators for detecting this threshold were 82 per cent for Fairy Liquid and 84 per cent for cmt fluid, and the specificities were 93 and 91 per cent respectively. The other detergents contained less anionic surfactants and were less sensitive but similarly specific.


Subject(s)
Detergents , Mastitis, Bovine/diagnosis , Milk/cytology , Observer Variation , Animals , Cattle , Cell Count/veterinary , Female , Mass Screening/veterinary , Milk/microbiology , Reference Values , Sensitivity and Specificity
19.
Trends Genet ; 14(4): 156-62, 1998 Apr.
Article in English | MEDLINE | ID: mdl-9594664

ABSTRACT

The LIM domain is a specialized double-zinc finger motif found in a variety of proteins, in association with domains of divergent functions or forming proteins composed primarily of LIM domains. LIM domains interact specifically with other LIM domains and with many different protein domains. LIM domains are thought to function as protein interaction modules, mediating specific contacts between members of functional complexes and modulating the activity of some of the constituent proteins. Nucleic acid binding by LIM domains, while suggested by structural considerations, remains an unproven possibility. LIM-domain proteins can be nuclear, cytoplasmic, or can shuttle between compartments. Several important LIM proteins are associated with the cytoskeleton, having a role in adhesion-plaque and actin-microfilament organization. Among nuclear LIM proteins, the LIM homeodomain proteins form a major subfamily with important functions in cell lineage determination and pattern formation during animal development.


Subject(s)
Homeodomain Proteins/physiology , Animals , Homeodomain Proteins/genetics , Humans
20.
Vet Rec ; 160(9): 287-93, 2007 Mar 03.
Article in English | MEDLINE | ID: mdl-17337605

ABSTRACT

An intervention study was carried out on 52 dairy farms in England and Wales to determine whether the implementation of a well-specified mastitis control plan in herds with an incidence of clinical mastitis of more than 35 cases per 100 cows per year would reduce the incidence of clinical mastitis, and also reduce the incidence of increases in the somatic cell counts of individual cows. A clearly defined plan for the diagnosis and control of mastitis was developed by two veterinary specialists from the research literature. The herds were randomly allocated to receive the plan either at the start of the study (intervention herds) or after one year (control herds). Data on mastitis management and the farm environment were collected during farm visits. After one year there was a significant 22 per cent reduction in the proportion of cows affected with clinical mastitis on the intervention farms compared with the control farms. There were also significant reductions of approximately 20 per cent in the incidence of clinical mastitis and in the occurrence of increases in the somatic cell counts of individual cows from below, to above 200,000 cells/ml.


Subject(s)
Animal Husbandry , Mastitis, Bovine/prevention & control , Animals , Cattle , Dairying , England/epidemiology , Female , Incidence , Mastitis, Bovine/epidemiology , Mastitis, Bovine/etiology , Milk/cytology , Treatment Outcome , Wales/epidemiology
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