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1.
Ophthalmology ; 124(7): 992-1003, 2017 07.
Article in English | MEDLINE | ID: mdl-28412069

ABSTRACT

PURPOSE: To identify the genetic cause of and describe the phenotype in 4 families with autosomal recessive retinitis pigmentosa (arRP) that can be associated with pseudocoloboma. DESIGN: Case series. PARTICIPANTS: Seven patients from 4 unrelated families with arRP, among whom 3 patients had bilateral early-onset macular pseudocoloboma. METHODS: We performed homozygosity mapping and whole-exome sequencing in 5 probands and 2 unaffected family members from 4 unrelated families. Subsequently, Sanger sequencing and segregation analysis were performed in additional family members. We reviewed the medical history of individuals carrying IDH3A variants and performed additional ophthalmic examinations, including full-field electroretinography, fundus photography, fundus autofluorescence imaging, and optical coherence tomography. MAIN OUTCOME MEASURES: IDH3A variants, age at diagnosis, visual acuity, fundus appearance, visual field, and full-field electroretinography, fundus autofluorescence, and optical coherence tomography findings. RESULTS: We identified 7 different variants in IDH3A in 4 unrelated families, that is, 5 missense, 1 nonsense, and 1 frameshift variant. All participants showed symptoms early in life, ranging from night blindness to decreased visual acuity, and were diagnosed between the ages of 1 and 11 years. Four participants with biallelic IDH3A variants displayed a typical arRP phenotype and 3 participants were diagnosed with arRP and pseudocoloboma of the macula. CONCLUSIONS: IDH3A variants were identified as a novel cause of typical arRP in some individuals associated with macular pseudocoloboma. We observed both phenotypes in 2 siblings carrying the same compound heterozygous variants, which could be explained by variable disease expression and warrants caution when making assertions about genotype-phenotype correlations.


Subject(s)
Coloboma/genetics , DNA/genetics , Eye Proteins/genetics , Genetic Association Studies , Macula Lutea/pathology , Mutation , Retinitis Pigmentosa/genetics , Adolescent , Adult , Child , Child, Preschool , Coloboma/diagnosis , Coloboma/metabolism , DNA Mutational Analysis , Electroretinography , Exome , Eye Proteins/metabolism , Female , Genes, Recessive , Homozygote , Humans , Male , Pedigree , Phenotype , Retinitis Pigmentosa/diagnosis , Retinitis Pigmentosa/metabolism , Tomography, Optical Coherence , Visual Acuity , Visual Fields , Young Adult
2.
J Am Soc Nephrol ; 27(12): 3589-3599, 2016 Dec.
Article in English | MEDLINE | ID: mdl-27020852

ABSTRACT

Autosomal dominant polycystic kidney disease (ADPKD), characterized by the formation of numerous kidney cysts, is caused by PKD1 or PKD2 mutations and affects 0.1% of the population. Although recent clinical studies indicate that reduction of cAMP levels slows progression of PKD, this finding has not led to an established safe and effective therapy for patients, indicating the need to find new therapeutic targets. The role of TGF-ß in PKD is not clearly understood, but nuclear accumulation of phosphorylated SMAD2/3 in cyst-lining cells suggests the involvement of TGF-ß signaling in this disease. In this study, we ablated the TGF-ß type 1 receptor (also termed activin receptor-like kinase 5) in renal epithelial cells of PKD mice, which had little to no effect on the expression of SMAD2/3 target genes or the progression of PKD. Therefore, we investigated whether alternative TGF-ß superfamily ligands account for SMAD2/3 activation in cystic epithelial cells. Activins are members of the TGF-ß superfamily and drive SMAD2/3 phosphorylation via activin receptors, but activins have not been studied in the context of PKD. Mice with PKD had increased expression of activin ligands, even at early stages of disease. In addition, treatment with a soluble activin receptor IIB fusion (sActRIIB-Fc) protein, which acts as a soluble trap to sequester activin ligands, effectively inhibited cyst formation in three distinct mouse models of PKD. These data point to activin signaling as a key pathway in PKD and a promising target for therapy.


Subject(s)
Activins/antagonists & inhibitors , Polycystic Kidney Diseases/prevention & control , Signal Transduction , Animals , Disease Progression , Epithelial Cells , Female , Kidney/cytology , Male , Mice , Polycystic Kidney Diseases/etiology , Recombinant Fusion Proteins/pharmacology , Smad2 Protein/physiology , Smad3 Protein/physiology , Time Factors
3.
J Clin Immunol ; 36(3): 195-203, 2016 Apr.
Article in English | MEDLINE | ID: mdl-26931784

ABSTRACT

PURPOSE: Complete interferon-γ receptor 1 (IFN-γR1) deficiency is a primary immunodeficiency causing predisposition to severe infection due to intracellular pathogens. Only 36 cases have been reported worldwide. The purpose of this article is to describe a large novel deletion found in 3 related cases, which resulted in the complete removal of the IFNGR1 gene. METHODS: Whole blood from three patients was stimulated with lipopolysaccharide (LPS) and IFN-γ to determine production of tumor necrosis factor (TNF), interleukin-12 p40 (IL-12p40) and IL-10. Expression of IFN-γR1 on the cell membrane of patients' monocytes was assessed using flow cytometry. IFNGR1 transcript was analyzed in RNA and the gene and adjacent regions were analyzed in DNA. Finally, IL22RA2 transcript levels were analyzed in whole blood cells and dendritic cells. RESULTS: There was no expression of the IFN-γR1 on the monocytes. Consistent with this finding, there was no IFN-γ response in the whole blood assay as measured by effect on LPS-induced IL-12p40, TNF and IL-10 production. A 119.227 nt homozygous deletion on chromosome 6q23.3 was identified, removing the IFNGR1 gene completely and ending 117 nt upstream of the transcription start of the IL22RA2 gene. Transcript levels of IL22RA2 were similar in patient and control. CONCLUSIONS: We identified the first large genomic deletion of IFNGR1 causing complete IFN-γR1 deficiency. Despite the deletion ending very close to the IL22RA2 gene, it does not appear to affect IL22RA2 transcription and, therefore, may not have any additional clinical consequence.


Subject(s)
Gene Deletion , Immunologic Deficiency Syndromes/genetics , Opportunistic Infections/genetics , RNA, Messenger/genetics , Receptors, Interferon/genetics , Receptors, Interleukin/genetics , Adult , Blood Cells/drug effects , Blood Cells/immunology , Blood Cells/pathology , Child, Preschool , Chromosomes, Human, Pair 6 , Dendritic Cells/immunology , Dendritic Cells/pathology , Female , Gene Expression Regulation , Homozygote , Humans , Immunologic Deficiency Syndromes/immunology , Immunologic Deficiency Syndromes/physiopathology , Infant , Interferon-gamma/pharmacology , Interleukin-10/genetics , Interleukin-10/immunology , Interleukin-12 Subunit p40/genetics , Interleukin-12 Subunit p40/immunology , Lipopolysaccharides/pharmacology , Opportunistic Infections/immunology , Opportunistic Infections/physiopathology , Pedigree , Primary Cell Culture , RNA, Messenger/immunology , Receptors, Interferon/deficiency , Receptors, Interferon/immunology , Receptors, Interleukin/immunology , Sequence Analysis, DNA , Transcription, Genetic , Tumor Necrosis Factor-alpha/genetics , Tumor Necrosis Factor-alpha/immunology , Interferon gamma Receptor
4.
Am J Hum Genet ; 89(5): 595-606, 2011 Nov 11.
Article in English | MEDLINE | ID: mdl-22019272

ABSTRACT

Excess exogenous retinoic acid (RA) has been well documented to have teratogenic effects in the limb and craniofacial skeleton. Malformations that have been observed in this context include craniosynostosis, a common developmental defect of the skull that occurs in 1 in 2500 individuals and results from premature fusion of the cranial sutures. Despite these observations, a physiological role for RA during suture formation has not been demonstrated. Here, we present evidence that genetically based alterations in RA signaling interfere with human development. We have identified human null and hypomorphic mutations in the gene encoding the RA-degrading enzyme CYP26B1 that lead to skeletal and craniofacial anomalies, including fusions of long bones, calvarial bone hypoplasia, and craniosynostosis. Analyses of murine embryos exposed to a chemical inhibitor of Cyp26 enzymes and zebrafish lines with mutations in cyp26b1 suggest that the endochondral bone fusions are due to unrestricted chondrogenesis at the presumptive sites of joint formation within cartilaginous templates, whereas craniosynostosis is induced by a defect in osteoblastic differentiation. Ultrastructural analysis, in situ expression studies, and in vitro quantitative RT-PCR experiments of cellular markers of osseous differentiation indicate that the most likely cause for these phenomena is aberrant osteoblast-osteocyte transitioning. This work reveals a physiological role for RA in partitioning skeletal elements and in the maintenance of cranial suture patency.


Subject(s)
Cranial Sutures , Craniosynostoses , Cytochrome P-450 Enzyme System , Tretinoin , Zebrafish Proteins/genetics , Animals , Cell Differentiation , Cranial Sutures/drug effects , Cranial Sutures/embryology , Cranial Sutures/growth & development , Cranial Sutures/pathology , Craniosynostoses/enzymology , Craniosynostoses/genetics , Craniosynostoses/pathology , Cytochrome P-450 Enzyme Inhibitors , Cytochrome P-450 Enzyme System/genetics , Disease Models, Animal , Female , Fetal Death/genetics , Gene Expression Regulation, Developmental , Growth and Development/genetics , Humans , Mice , Osteoblasts/cytology , Osteogenesis/drug effects , Osteogenesis/genetics , Polymorphism, Genetic/genetics , Pregnancy , Retinoic Acid 4-Hydroxylase , Sequence Homology, Amino Acid , Tretinoin/metabolism , Tretinoin/pharmacology , Zebrafish/embryology , Zebrafish/genetics
5.
Genet Med ; 16(6): 425-32, 2014 Jun.
Article in English | MEDLINE | ID: mdl-24177057

ABSTRACT

The fact that techniques of prenatal diagnosis are used in India and China to selectively eliminate females is widely known. It has been extensively reported in the international media and in scientific publications since the 1990s. The publication of the Census of India 2011 shows that the ratio of girls to boys below the age of 6 years continues to decline at an alarming rate. Following that publication, this topic has again received international attention. The aim of this article is to better inform the human genetics community of the magnitude of this practice and its consequences in India.In this overview, we examine the impact of prenatal technology on the sex ratio in India. We present facts and figures from the Census of India and other publications that show that the practice is wide spread throughout India, in urban and rural areas, among the rich and the poor, and among the educated and the illiterate. We also briefly discuss the possible causes, consequences, and solutions.


Subject(s)
Prenatal Diagnosis , Sex Determination Analysis , Sex Ratio , China , Culture , Female , Humans , India/epidemiology , India/ethnology , Infant , Infant Mortality , Infanticide/trends , Male , Prenatal Diagnosis/statistics & numerical data , Rural Population , Sex Determination Analysis/statistics & numerical data , Socioeconomic Factors , Urban Population
6.
Hum Mutat ; 34(3): 430-4, 2013 Mar.
Article in English | MEDLINE | ID: mdl-23169394

ABSTRACT

Aarskog-Scott syndrome (ASS) is a rare disorder with characteristic facial, skeletal, and genital abnormalities. Mutations in the FGD1 gene (Xp11.21) are responsible for ASS. However, mutation detection rates are low. Here, we report a family with ASS where conventional Sanger sequencing failed to detect a pathogenic change in FGD1. To identify the causative gene, we performed whole-exome sequencing in two patients. An initial analysis did not reveal a likely candidate gene. After relaxing our filtering criteria, accepting larger intronic segments, we unexpectedly identified a branch point (BP) variant in FGD1. Analysis of patient-derived RNA showed complete skipping of exon 13, leading to premature translation termination. The BP variant detected is one of very few reported so far proven to affect splicing. Our results show that besides digging deeper to reveal nonobvious variants, isolation and analysis of RNA provides a valuable but under-appreciated tool to resolve cases with unknown genetic defects.


Subject(s)
Dwarfism/diagnosis , Dwarfism/genetics , Exome , Genetic Diseases, X-Linked/diagnosis , Genetic Diseases, X-Linked/genetics , Hand Deformities, Congenital/diagnosis , Hand Deformities, Congenital/genetics , Heart Defects, Congenital/diagnosis , Heart Defects, Congenital/genetics , Sequence Analysis, DNA/methods , Abnormalities, Multiple/diagnosis , Abnormalities, Multiple/genetics , Exons , Face/abnormalities , Female , Genitalia, Male/abnormalities , Guanine Nucleotide Exchange Factors/genetics , Humans , Male , Mutation , Phenotype , Polymorphism, Single Nucleotide , Sequence Analysis, RNA/methods
7.
Hum Mutat ; 34(5): 706-13, 2013 May.
Article in English | MEDLINE | ID: mdl-23418007

ABSTRACT

Spinocerebellar ataxias are phenotypically, neuropathologically, and genetically heterogeneous. The locus of autosomal recessive spinocerebellar ataxia type 7 (SCAR7) was previously linked to chromosome band 11p15. We have identified TPP1 as the causative gene for SCAR7 by exome sequencing. A missense and a splice site variant in TPP1, cosegregating with the disease, were found in a previously described SCAR7 family and also in another patient with a SCAR7 phenotype. TPP1, encoding the tripeptidyl-peptidase 1 enzyme, is known as the causative gene for late infantile neuronal ceroid lipofuscinosis disease 2 (CLN2 disease). CLN2 disease is characterized by epilepsy, loss of vision, ataxia, and a rapidly progressive course, leading to early death. SCAR7 patients showed ataxia and low activity of tripeptidyl-peptidase 1, but no ophthalmologic abnormalities or epilepsy. Also, the slowly progressive evolution of the disease until old age and absence of ultra structural curvilinear profiles is different from the known CLN2 phenotypes. Our findings now expand the phenotypes related to TPP1-variants to SCAR7. In spite of the limited sample size and measurements, a putative genotype-phenotype correlation may be drawn: we hypothesize that loss of function variants abolishing TPP1 enzyme activity lead to CLN2 disease, whereas variants that diminish TPP1 enzyme activity lead to SCAR7.


Subject(s)
Aminopeptidases/genetics , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/genetics , Neuronal Ceroid-Lipofuscinoses/genetics , Serine Proteases/genetics , Spinocerebellar Ataxias/genetics , Amino Acid Sequence , Aminopeptidases/chemistry , Animals , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/chemistry , Exome , Female , Humans , Magnetic Resonance Imaging , Male , Microscopy, Electron , Middle Aged , Molecular Sequence Data , Neuronal Ceroid-Lipofuscinoses/pathology , Pedigree , RNA/genetics , Sequence Homology, Amino Acid , Serine Proteases/chemistry , Tripeptidyl-Peptidase 1
8.
Hum Mutat ; 34(11): 1519-28, 2013 Nov.
Article in English | MEDLINE | ID: mdl-23929686

ABSTRACT

De novo germline variants in several components of the SWI/SNF-like BAF complex can cause Coffin-Siris syndrome (CSS), Nicolaides-Baraitser syndrome (NCBRS), and nonsyndromic intellectual disability. We screened 63 patients with a clinical diagnosis of CSS for these genes (ARID1A, ARID1B, SMARCA2, SMARCA4, SMARCB1, and SMARCE1) and identified pathogenic variants in 45 (71%) patients. We found a high proportion of variants in ARID1B (68%). All four pathogenic variants in ARID1A appeared to be mosaic. By using all variants from the Exome Variant Server as test data, we were able to classify variants in ARID1A, ARID1B, and SMARCB1 reliably as being pathogenic or nonpathogenic. For SMARCA2, SMARCA4, and SMARCE1 several variants in the EVS remained unclassified, underlining the importance of parental testing. We have entered all variant and clinical information in LOVD-powered databases to facilitate further genotype-phenotype correlations, as these will become increasingly important because of the uptake of targeted and untargeted next generation sequencing in diagnostics. The emerging phenotype-genotype correlation is that SMARCB1 patients have the most marked physical phenotype and severe cognitive and growth delay. The variability in phenotype seems most marked in ARID1A and ARID1B patients. Distal limbs anomalies are most marked in ARID1A patients and least in SMARCB1 patients. Numbers are small however, and larger series are needed to confirm this correlation.


Subject(s)
Abnormalities, Multiple/diagnosis , Abnormalities, Multiple/genetics , Face/abnormalities , Genetic Association Studies , Hand Deformities, Congenital/diagnosis , Hand Deformities, Congenital/genetics , Intellectual Disability/diagnosis , Intellectual Disability/genetics , Micrognathism/diagnosis , Micrognathism/genetics , Multiprotein Complexes/genetics , Neck/abnormalities , Chromosomal Proteins, Non-Histone/genetics , DNA Helicases/genetics , DNA-Binding Proteins/genetics , Exons , Facies , Gene Order , Humans , Nuclear Proteins/genetics , Phenotype , SMARCB1 Protein , Transcription Factors/genetics
9.
Kidney Int ; 83(6): 1099-108, 2013 Jun.
Article in English | MEDLINE | ID: mdl-23466997

ABSTRACT

Autosomal-dominant polycystic kidney disease is characterized by progressive cyst formation and fibrosis in the kidneys. Here we describe an orthologous Pkd1(nl,nl) mouse model, with reduced expression of the normal Pkd1 transcript, on a fixed genetic background of equal parts C57Bl/6 and 129Ola/Hsd mice (B6Ola-Pkd1(nl,nl)). In these mice, the first cysts develop from mature proximal tubules around birth. Subsequently, larger cysts become visible at day 7, followed by distal tubule and collecting duct cyst formation, and progressive cystic enlargement to develop into large cystic kidneys within 4 weeks. Interestingly, cyst expansion was followed by renal volume regression due to cyst collapse. This was accompanied by focal formation of fibrotic areas, an increased expression of genes involved in matrix remodeling and subsequently an increase in infiltrating immune cells. After an initial increase in blood urea within the first 4 weeks, renal function remained stable over time and the mice were able to survive up to a year. Also, in kidneys of ADPKD patients collapsed cysts were observed, in addition to massive fibrosis and immune infiltrates. Thus, B6Ola-Pkd1(nl,nl) mice show regression of cysts and renal volume that is not accompanied by a reduction in blood urea levels.


Subject(s)
Kidney/pathology , Polycystic Kidney, Autosomal Dominant/pathology , Age Factors , Animals , Biomarkers/blood , Disease Models, Animal , Disease Progression , Extracellular Matrix/metabolism , Fibrosis , Gene Expression Regulation , Humans , Kidney/immunology , Kidney/metabolism , Kidney/physiopathology , Mice , Mice, 129 Strain , Mice, Inbred C57BL , Mice, Transgenic , Polycystic Kidney, Autosomal Dominant/blood , Polycystic Kidney, Autosomal Dominant/genetics , Polycystic Kidney, Autosomal Dominant/immunology , Polycystic Kidney, Autosomal Dominant/physiopathology , TRPP Cation Channels/genetics , TRPP Cation Channels/metabolism , Urea/blood
10.
Am J Hum Genet ; 87(1): 146-53, 2010 Jul 09.
Article in English | MEDLINE | ID: mdl-20598277

ABSTRACT

Terminal osseous dysplasia (TOD) is an X-linked dominant male-lethal disease characterized by skeletal dysplasia of the limbs, pigmentary defects of the skin, and recurrent digital fibroma with onset in female infancy. After performing X-exome capture and sequencing, we identified a mutation at the last nucleotide of exon 31 of the FLNA gene as the most likely cause of the disease. The variant c.5217G>A was found in six unrelated cases (three families and three sporadic cases) and was not found in 400 control X chromosomes, pilot data from the 1000 Genomes Project, or the FLNA gene variant database. In the families, the variant segregated with the disease, and it was transmitted four times from a mildly affected mother to a more seriously affected daughter. We show that, because of nonrandom X chromosome inactivation, the mutant allele was not expressed in patient fibroblasts. RNA expression of the mutant allele was detected only in cultured fibroma cells obtained from 15-year-old surgically removed material. The variant activates a cryptic splice site, removing the last 48 nucleotides from exon 31. At the protein level, this results in a loss of 16 amino acids (p.Val1724_Thr1739del), predicted to remove a sequence at the surface of filamin repeat 15. Our data show that TOD is caused by this single recurrent mutation in the FLNA gene.


Subject(s)
Bone Diseases, Developmental/genetics , Bone Neoplasms/genetics , Contractile Proteins/genetics , Fibroma/genetics , Genetic Diseases, X-Linked/genetics , Microfilament Proteins/genetics , Pigmentation Disorders/genetics , Adult , Bone Diseases, Developmental/complications , Bone Neoplasms/complications , Child, Preschool , Female , Fibroma/complications , Filamins , Genetic Association Studies , Humans , Infant , Infant, Newborn , Male , Mutation , Neoplasm Recurrence, Local , Pedigree , Pigmentation Disorders/complications , Skin Pigmentation
11.
Am J Med Genet A ; 161A(5): 973-6, 2013 May.
Article in English | MEDLINE | ID: mdl-23494849

ABSTRACT

Chudley-McCullough syndrome (CMS) is characterized by profound sensorineural hearing loss and brain anomalies. Variants in GPSM2 have recently been reported as a cause of CMS by Doherty et al. In this study we have performed exome sequencing of three CMS patients from two unrelated families from the same Dutch village. We identified one homozygous frameshift GPSM2 variants c.1473delG in all patients. We show that this variant arises from a shared, rare haplotype. Since the c.1473delG variant was found in Mennonite settlers, it likely originated in Europe. To support DNA diagnostics, we established an LOVD database for GPSM2 containing all variants thus far described.


Subject(s)
Agenesis of Corpus Callosum/genetics , Arachnoid Cysts/genetics , Exome/genetics , Hearing Loss, Sensorineural/genetics , Intracellular Signaling Peptides and Proteins/genetics , Adolescent , Adult , Child, Preschool , Europe , Female , Founder Effect , Humans , Infant , Male , Mutation , Netherlands , North America , Pedigree , Sequence Analysis, DNA
12.
J Med Genet ; 49(9): 598-600, 2012 Sep.
Article in English | MEDLINE | ID: mdl-22972950

ABSTRACT

BACKGROUND: Gene-targeting studies in mice have revealed a key role for EVI1 protein in the maintenance of haematopoiesis, and argue in favour of a gene dosage requirement for EVI1 in the regulation of haematopoietic stem cells. Furthermore, a fusion transcript of MDS1 and EVI1 has been shown to play a critical role in maintaining long-term haematopoietic stem cell function. Inappropriate activation of EVI1, usually due to a translocation, is a well known and unfavourable change in several myeloid malignancies. It is not known whether haploinsufficiency of any of these genes leads to disease in humans. METHODS: SNP array analysis in a patient with in a neonate with congenital thrombocytopenia and subsequent aplastic anaemia RESULTS AND CONCLUSIONS: We report for the first time a constitutional deletion encompassing the EVI1 and MDS1 genes in a human, and argue that the deletion causes congenital bone marrow failure in this patient.


Subject(s)
Anemia, Aplastic/genetics , Chromosomes, Human, Pair 3/genetics , DNA-Binding Proteins/genetics , Proto-Oncogenes/genetics , Sequence Deletion/genetics , Thrombocytopenia/congenital , Thrombocytopenia/genetics , Transcription Factors/genetics , Adult , Anemia, Aplastic/complications , Female , Humans , Infant , Infant, Newborn , MDS1 and EVI1 Complex Locus Protein , Male , Polymorphism, Single Nucleotide/genetics , Pregnancy
13.
J Am Soc Nephrol ; 23(5): 842-53, 2012 May.
Article in English | MEDLINE | ID: mdl-22343118

ABSTRACT

Inhibition of the mammalian target of rapamycin (mTOR) shows beneficial effects in animal models of polycystic kidney disease (PKD); however, two clinical trials in patients with autosomal dominant PKD failed to demonstrate a short-term benefit in either the early or progressive stages of disease. The stage of disease during treatment and the dose of mTOR inhibitors may account for these differing results. Here, we studied the effects of a conventional low dose and a higher dose of sirolimus (blood levels of 3 ng/ml and 30-60 ng/ml, respectively) on mTOR activity and renal cystic disease in two Pkd1-mutant mouse models at different stages of the disease. When initiated at early but not late stages of disease, high-dose treatment strongly reduced mTOR signaling in renal tissues, inhibited cystogenesis, accelerated cyst regression, and abrogated fibrosis and the infiltration of immune cells. In contrast, low-dose treatment did not significantly reduce renal cystic disease. Levels of p-S6Rp(Ser240/244), which marks mTOR activity, varied between kidneys; severity of the renal cystic phenotype correlated with the level of mTOR activity. Taken together, these data suggest that long-term treatment with conventional doses of sirolimus is insufficient to inhibit mTOR activity in renal cystic tissue. Mechanisms to increase bioavailability or to target mTOR inhibitors more specifically to kidneys, alone or in combination with other compounds, may improve the potential for these therapies in PKD.


Subject(s)
Immunosuppressive Agents/pharmacology , Polycystic Kidney Diseases/drug therapy , Signal Transduction/drug effects , Sirolimus/pharmacology , TOR Serine-Threonine Kinases/antagonists & inhibitors , Animals , Dose-Response Relationship, Drug , Female , Male , Mice , Mice, Inbred C57BL , Polycystic Kidney Diseases/pathology , TOR Serine-Threonine Kinases/physiology
14.
Breast Cancer Res Treat ; 134(1): 219-27, 2012 Jul.
Article in English | MEDLINE | ID: mdl-22297469

ABSTRACT

The MUTYH gene is involved in base excision repair. MUTYH mutations predispose to recessively inherited colorectal polyposis and cancer. Here, we evaluate an association with breast cancer (BC), following up our previous finding of an elevated BC frequency among Dutch bi-allelic MUTYH mutation carriers. A case­control study was performed comparing 1,469 incident BC patients (ORIGO cohort), 471 individuals displaying features suggesting a genetic predisposition for BC, but without a detectable BRCA1 or BRCA2 mutation (BRCAx cohort), and 1,666 controls. First, for 303 consecutive patients diagnosed before age 55 years and/or with multiple primary breast tumors, the MUTYH coding region and flanking introns were sequenced. The remaining subjects were genotyped for five coding variants, p.Tyr179Cys, p.Arg309Cys, p.Gly396Asp, p.Pro405Leu, and p.Ser515Phe, and four tagging SNPs, c.37-2487G>T, p.Val22Met, c.504+35G>A, and p.Gln338His. No bi-allelic pathogenic MUTYH mutations were identified. The pathogenic variant p.Gly396Asp and the variant of uncertain significance p.Arg309Cys occurred twice as frequently in BRCAx subjects as compared to incident BC patients and controls (p=0.13 and p=0.15, respectively). The likely benign variant p.Val22Met occurred less frequently in patients from the incident BC (p=0.03) and BRCAx groups (p=0.11), respectively, as compared to the controls. Minor allele genotypes of several MUTYH variants showed trends towards association with lobular BC histology. This extensive case­control study could not confirm previously reported associations of MUTYH variants with BC, although it was too small to exclude subtle effects on BC susceptibility.


Subject(s)
Breast Neoplasms/genetics , Carcinoma, Ductal, Breast/genetics , Carcinoma, Lobular/genetics , DNA Glycosylases/genetics , Case-Control Studies , DNA Mutational Analysis , Female , Gene Frequency , Genes, BRCA1 , Genes, BRCA2 , Genetic Association Studies , Genetic Predisposition to Disease , Genotype , Humans , Middle Aged , Mutation , Netherlands
15.
Nephrol Dial Transplant ; 27(11): 4131-7, 2012 Nov.
Article in English | MEDLINE | ID: mdl-22523115

ABSTRACT

BACKGROUND: Experimental studies have suggested that vasopressin plays a detrimental role in autosomal dominant polycystic kidney disease (ADPKD). It is, however, unknown whether endogenous vasopressin concentration is associated with kidney function decline in subjects with ADPKD. METHODS: We measured plasma copeptin (a marker of vasopressin) in 79 ADPKD subjects with renal function assessed during short-term follow-up by inulin clearance measured glomerular filtration rate (mGFR) and during long-term follow-up by Modification of Diet in Renal Disease (MDRD) equation estimated GFR (eGFR). RESULTS: In these subjects (43% male, age 36.8 ± 10.1 years, GFR 96.8 ± 18.2 mL/min/1.73 m(2)), median copeptin concentration at baseline was 2.71 [interquartile ranges (IQR) 1.63-5.46] pmol/L. Baseline copeptin concentration was inversely associated both with change in mGFR during follow-up for 3.3 (3.1-3.5) years, (R = -0.300, P = 0.01), as well as with change in eGFR during follow-up for 11.2 (4.5-14.3) years, (R = -0.302, P < 0.01). These associations were independent of age, gender and baseline GFR. Nine subjects started renal replacement therapy during follow-up of which eight had at baseline a copeptin concentration above the median in this population. CONCLUSION: In ADPKD subjects, a higher copeptin concentration is associated with kidney function decline during follow-up, suggesting that copeptin may be a new marker to predict kidney outcome in ADPKD.


Subject(s)
Glycopeptides/blood , Kidney/physiopathology , Polycystic Kidney, Autosomal Dominant/physiopathology , Vasopressins/blood , Adult , Biomarkers/blood , Female , Follow-Up Studies , Glomerular Filtration Rate , Humans , Kidney Function Tests , Male , Middle Aged , Polycystic Kidney, Autosomal Dominant/blood
16.
J Pathol ; 224(1): 133-42, 2011 May.
Article in English | MEDLINE | ID: mdl-21381034

ABSTRACT

Autosomal dominant polycystic kidney disease (ADPKD) is characterized by progressive deterioration of renal function and formation of cysts, and is an important cause of end-stage renal disease. Previously we showed that tubular epithelial injury accelerates cyst formation in inducible Pkd1-deletion mice. In these mice, expression of the planar cell polarity (PCP) component Four-jointed (Fjx1) is decreased during epithelial repair, while in control mice Fjx1 expression is increased and may be required during tissue regeneration. In cystic kidneys, however, Fjx1 expression is also increased. Besides a PCP component, Four-jointed is also implicated in the Hippo-signalling pathway. This pathway is involved in organ size control by regulating proliferation and apoptosis. The role of Hippo signalling, together with the opposing expression pattern of Fjx1 during epithelial repair and at cystic stages, triggered us to investigate the activity of the Hippo pathway during these processes. Therefore, we examined its final effector molecule, the transcriptional co-activator Yes-associated protein (YAP) and observed that during tissue repair, YAP expression was not different between Pkd1-deletion mice and controls, ie during tissue regeneration YAP expression was increased and predominantly localized in the cytoplasm but normalized after tissue repair. At a later stage, however, in cystic epithelia and epithelia of dilated tubules, strong nuclear YAP accumulation was observed, accompanied by up-regulation of the YAP transcriptional targets Birc-3, Ctgf, InhbA, and Fjx1. Altered activity of the Hippo pathway was confirmed in renal tissues from human ADPKD and ARPKD patients, as well as in cystic renal tumours. Our data strengthen the concept that during epithelial repair Four-jointed is involved in PCP signalling, while in cystic kidneys it is related to Hippo signalling and cyst growth.


Subject(s)
Polycystic Kidney, Autosomal Dominant/metabolism , Proto-Oncogene Proteins c-yes/metabolism , Animals , Cell Nucleus/metabolism , Cysteine/analogs & derivatives , Disease Models, Animal , Disease Progression , Epithelial Cells/metabolism , Humans , Kidney/physiology , Kidney Tubules/metabolism , Mice , Mice, Knockout , Polycystic Kidney, Autosomal Dominant/chemically induced , Polycystic Kidney, Autosomal Dominant/pathology , Polycystic Kidney, Autosomal Dominant/physiopathology , Polycystic Kidney, Autosomal Recessive/metabolism , Regeneration/physiology , Signal Transduction/physiology , TRPP Cation Channels/deficiency , TRPP Cation Channels/physiology , Transcriptional Activation , Up-Regulation
17.
Am J Physiol Renal Physiol ; 300(5): F1193-202, 2011 May.
Article in English | MEDLINE | ID: mdl-21345977

ABSTRACT

Autosomal dominant polycystic kidney disease (ADPKD) caused by mutations in either the PKD1 or PKD2 gene is a major cause of end-stage renal failure. A number of compounds targeting specific signaling pathways were able to inhibit cystogenesis in rodent models and are currently being tested in clinical trials. However, given the complex signaling in ADPKD, an ideal therapy would likely have to comprise several pathways at once. Therefore, multitarget compounds may provide promising therapeutic interventions for the treatment of ADPKD. To test this hypothesis, we treated Pkd1-deletion mice with diferuloylmethane (curcumin), a compound without appreciable side effects and known to modulate several pathways that are also altered in ADPKD, e.g., mammalian target of rapamycin (mTOR) and Wnt signaling. After conditional inactivation of Pkd1, mTOR signaling was indeed elevated in cystic kidneys. Interestingly, also activation of signal transducers and activator of transcription 3 (STAT3) strongly correlated with cyst progression. Both pathways were effectively inhibited in vitro by curcumin. Importantly, Pkd1-deletion mice that were treated with curcumin and killed at an early stage of PKD displayed improved renal histology and reduced STAT3 activation, proliferation index, cystic index, and kidney weight/body weight ratios. In addition, renal failure was significantly postponed in mice with severe PKD. These data suggest that multitarget compounds hold promising potential for safe and effective treatment of ADPKD.


Subject(s)
Curcumin/pharmacology , Kidney/drug effects , Polycystic Kidney, Autosomal Dominant/prevention & control , Renal Insufficiency/prevention & control , Signal Transduction/drug effects , TRPP Cation Channels/deficiency , Animals , Cell Proliferation/drug effects , Cells, Cultured , Cytoprotection , Disease Models, Animal , Dose-Response Relationship, Drug , Kidney/enzymology , Kidney/pathology , Mice , Mice, Knockout , Organ Size/drug effects , Phosphorylation , Polycystic Kidney, Autosomal Dominant/enzymology , Polycystic Kidney, Autosomal Dominant/genetics , Polycystic Kidney, Autosomal Dominant/pathology , Renal Insufficiency/enzymology , Renal Insufficiency/genetics , Renal Insufficiency/pathology , Ribosomal Protein S6/metabolism , STAT3 Transcription Factor/metabolism , TOR Serine-Threonine Kinases/metabolism , TRPP Cation Channels/genetics
18.
Lab Invest ; 91(1): 24-32, 2011 Jan.
Article in English | MEDLINE | ID: mdl-20856231

ABSTRACT

Autosomal dominant polycystic kidney disease (ADPKD) is a multisystem disorder characterized by renal, hepatic and pancreatic cyst formation and cardiovascular complications. The condition is caused by mutations in the PKD1 or PKD2 gene. In mice with reduced expression of Pkd1, dissecting aneurysms with prominent media thickening have been seen. To study the effect of selective disruption of Pkd1 in vascular smooth muscle cells (SMCs), we have generated mice in which a floxed part of the Pkd1 gene was deleted by Cre under the control of the SM22 promotor (SM22-Pkd1(del/del) mice). Cre activity was confirmed by X-gal staining using lacZ expressing Cre reporter mice (R26R), and quantitative PCR indicated that in the aorta Pkd1 gene expression was strongly reduced, whereas Pkd2 levels remained unaltered. Histopathological analysis revealed cyst formation in pancreas, liver and kidneys as the result of extravascular Cre activity in pancreatic ducts, bile ducts and in the glomerular Bowman's capsule. Remarkably, we did not find any spontaneous gross structural blood vessel abnormalities in mice with somatic Pkd1 gene disruption in SMCs or simultaneous disruption of Pkd1 in SMCs and endothelial cells (ECs). Extensive isometric myographic analysis of the aorta did not reveal differences in response to KCl, acetylcholine, phenylephrin or serotonin, except for a significant increase in contractility induced by phenylephrin on arteries from 40 weeks old Pkd1(del/+) germ-line mice. However, SM22-Pkd1(del/del) mice showed significantly reduced decrease in heart rate on angiotensin II-induced hypertension. The present findings further demonstrate in vivo, that adaptation to hypertension is altered in SM22-Pkd1(del/del) mice.


Subject(s)
Hypertension/metabolism , Muscle, Smooth, Vascular/metabolism , Myocytes, Smooth Muscle/metabolism , TRPP Cation Channels/metabolism , Animals , Aorta/metabolism , Aorta/physiopathology , Blood Pressure , Endothelial Cells/metabolism , Female , Heart Rate , Hypertension/genetics , Hypertension/physiopathology , Immunohistochemistry , Male , Mice , Mice, Knockout , Microfilament Proteins/genetics , Microfilament Proteins/metabolism , Muscle Proteins/genetics , Muscle Proteins/metabolism , Muscle, Smooth, Vascular/cytology , Polycystic Kidney Diseases/genetics , Polycystic Kidney Diseases/metabolism , Reverse Transcriptase Polymerase Chain Reaction , TRPP Cation Channels/genetics
19.
Hum Mol Genet ; 18(14): 2532-42, 2009 Jul 15.
Article in English | MEDLINE | ID: mdl-19401297

ABSTRACT

Autosomal dominant polycystic kidney disease (ADPKD) is characterized by large fluid-filled cysts and progressive deterioration of renal function necessitating renal replacement therapy. Previously, we generated a tamoxifen-inducible, kidney epithelium-specific Pkd1-deletion mouse model and showed that inactivation of the Pkd1 gene induces rapid cyst formation in developing kidneys and a slow onset of disease in adult mice. Therefore, we hypothesized that injury-induced tubular epithelial cell proliferation may accelerate cyst formation in the kidneys of adult Pkd1-deletion mice. Mice were treated with the nephrotoxicant 1,2-dichlorovinyl-cysteine (DCVC) after Pkd1-gene inactivation, which indeed accelerated cyst formation significantly. After the increased proliferation during tissue regeneration, proliferation decreased to basal levels in Pkd1-deletion mice just as in DCVC-treated controls. However, in severe cystic kidneys, 10-14 weeks after injury, proliferation increased again. This biphasic response suggests that unrestricted cell proliferation after injury is not the underlying mechanism for cyst formation. Aberrant planar cell polarity (PCP) signaling and increased canonical Wnt signaling are suggested to be involved in cyst formation. Indeed, we show here that in Pkd1 conditional deletion mice expression of the PCP component Four-jointed (Fjx1) is decreased while its expression is required during tissue regeneration. In addition, we show that altered centrosome position and the activation of canonical Wnt signaling are early effects of Pkd1-gene disruption. This suggests that additional stimuli or events are required to trigger the process of cyst formation. We propose that during tissue repair, the integrity of the newly formed Pkd1-deficient cells is modified rendering them susceptible to subsequent cyst formation.


Subject(s)
Cell Polarity , Gene Deletion , Kidney Tubules/cytology , Polycystic Kidney, Autosomal Dominant/physiopathology , Signal Transduction , TRPP Cation Channels/genetics , Wnt Proteins/metabolism , Animals , Cell Proliferation , Disease Models, Animal , Humans , Intercellular Signaling Peptides and Proteins , Kidney Tubules/injuries , Kidney Tubules/metabolism , Male , Mice , Mice, Knockout , Nerve Tissue Proteins/genetics , Nerve Tissue Proteins/metabolism , Polycystic Kidney, Autosomal Dominant/genetics , Polycystic Kidney, Autosomal Dominant/metabolism , TRPP Cation Channels/metabolism , Wnt Proteins/genetics
20.
J Pathol ; 222(1): 21-31, 2010 Sep.
Article in English | MEDLINE | ID: mdl-20549648

ABSTRACT

Autosomal dominant polycystic kidney disease (ADPKD) is a common inherited renal disease characterized by many fluid-filled cysts and interstitial fibrosis in the kidneys, leading to chronic renal failure. During cystogenesis the renal tubules undergo extensive structural alterations that are accompanied by altered cellular signalling, directly and/or indirectly regulated by the PKD1 and PKD2 proteins. Since transforming growth factor (TGF)-beta signalling modulates cell proliferation, differentiation, apoptosis, adhesion and migration of various cell types, we studied the activation of this signalling pathway in Pkd1-mutant mouse models at different stages of the disease. Therefore, we analysed expression of the TGFbeta-Smad signalling pathway and its target genes in different Pkd1 mutant mouse models in various stages of polycystic disease. Nuclear accumulation of P-Smad2 in cyst lining epithelial cells was not observed in the initiation phase but was observed at mild and more advanced stages of PKD. This coincides with mild fibrosis and increased mRNA levels of TGFbeta target genes, such as fibronectin, collagen type I, plasminogen activator inhibitor 1 and matrix metalloproteinase-2. At this stage many interstitial fibroblasts were found around cysts, which also showed nuclear localization for P-Smad2. However, bone morphogenetic protein (BMP) signalling, which can antagonize TGFbeta signalling, is not affected, since nuclear expression of P-Smad1/5/8 and expression of the BMP target gene, inhibitor of DNA binding/differential-1 (ID-1) is not altered compared to wild-type controls. Also, human kidneys with progressive ADPKD showed increased nuclear localization of P-Smad2, while in general expression of P-Smad1/5/8 was weak. These results exclude TGFbeta signalling at the initiation of cystogenesis, but indicate an important role during cyst progression and in fibrogenesis of progressive ADPKD.


Subject(s)
Polycystic Kidney Diseases/metabolism , Smad Proteins/physiology , Transforming Growth Factor beta/physiology , Animals , Disease Models, Animal , Disease Progression , Fibrosis/genetics , Gene Expression Regulation/physiology , Humans , Kidney/pathology , Mice , Mice, Inbred C57BL , Mice, Knockout , RNA, Messenger/genetics , Signal Transduction/physiology , Smad Proteins/genetics , TRPP Cation Channels/genetics , Transforming Growth Factor beta/genetics
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