Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 20 de 198
Filter
Add more filters

Publication year range
1.
Proc Natl Acad Sci U S A ; 120(42): e2303774120, 2023 10 17.
Article in English | MEDLINE | ID: mdl-37816052

ABSTRACT

Although robustly expressed in the disease-free (DF) breast stroma, CD36 is consistently absent from the stroma surrounding invasive breast cancers (IBCs). In this study, we primarily observed CD36 expression in adipocytes and intralobular capillaries within the DF breast. Larger vessels concentrated in interlobular regions lacked CD36 and were instead marked by the expression of CD31. When evaluated in perilesional capillaries surrounding ductal carcinoma in situ, a nonobligate IBC precursor, CD36 loss was more commonly observed in lesions associated with subsequent IBC. Peroxisome proliferator-activated receptor γ (PPARγ) governs the expression of CD36 and genes involved in differentiation, metabolism, angiogenesis, and inflammation. Coincident with CD36 loss, we observed a dramatic suppression of PPARγ and its target genes in capillary endothelial cells (ECs) and pericytes, which typically surround and support the stability of the capillary endothelium. Factors present in conditioned media from malignant cells repressed PPARγ and its target genes not only in cultured ECs and pericytes but also in adipocytes, which require PPARγ for proper differentiation. In addition, we identified a role for PPARγ in opposing the transition of pericytes toward a tumor-supportive myofibroblast phenotype. In mouse xenograft models, early intervention with rosiglitazone, a PPARγ agonist, demonstrated significant antitumor effects; however, following the development of a palpable tumor, the antitumor effects of rosiglitazone were negated by the repression of PPARγ in the mouse stroma. In summary, PPARγ activity in healthy tissues places several stromal cell types in an antitumorigenic state, directly inhibiting EC proliferation, maintaining adipocyte differentiation, and suppressing the transition of pericytes into tumor-supportive myofibroblasts.


Subject(s)
Breast Neoplasms , Animals , Female , Humans , Mice , Adipocytes/metabolism , Breast Neoplasms/pathology , Endothelial Cells/metabolism , PPAR gamma/genetics , PPAR gamma/metabolism , Rosiglitazone/pharmacology
2.
Gastroenterology ; 165(2): 374-390, 2023 08.
Article in English | MEDLINE | ID: mdl-37196797

ABSTRACT

BACKGROUND & AIMS: Elements of field cancerization, including atrophic gastritis, metaplasia, and dysplasia, promote gastric cancer development in association with chronic inflammation. However, it remains unclear how stroma changes during carcinogenesis and how the stroma contributes to progression of gastric preneoplasia. Here we investigated heterogeneity of fibroblasts, one of the most important elements in the stroma, and their roles in neoplastic transformation of metaplasia. METHODS: We used single-cell transcriptomics to evaluate the cellular heterogeneity of mucosal cells from patients with gastric cancer. Tissue sections from the same cohort and tissue microarrays were used to identify the geographical distribution of distinct fibroblast subsets. We further evaluated the role of fibroblasts from pathologic mucosa in dysplastic progression of metaplastic cells using patient-derived metaplastic gastroids and fibroblasts. RESULTS: We identified 4 subsets of fibroblasts within stromal cells defined by the differential expression of PDGFRA, FBLN2, ACTA2, or PDGFRB. Each subset was distributed distinctively throughout stomach tissues with different proportions at each pathologic stage. The PDGFRα+ subset expanded in metaplasia and cancer compared with normal, maintaining a close proximity with the epithelial compartment. Co-culture of metaplasia- or cancer-derived fibroblasts with gastroids showing the characteristics of spasmolytic polypeptide-expressing metaplasia-induced disordered growth, loss of metaplastic markers, and increases in markers of dysplasia. Culture of metaplastic gastroids with conditioned media from metaplasia- or cancer-derived fibroblasts also promoted dysplastic transition. CONCLUSIONS: These findings indicate that fibroblast associations with metaplastic epithelial cells can facilitate direct transition of metaplastic spasmolytic polypeptide-expressing metaplasia cell lineages into dysplastic lineages.


Subject(s)
Gastric Mucosa , Stomach Neoplasms , Humans , Gastric Mucosa/pathology , Stomach Neoplasms/pathology , Hyperplasia , Metaplasia/pathology , Fibroblasts/metabolism
3.
Immunity ; 39(4): 697-710, 2013 Oct 17.
Article in English | MEDLINE | ID: mdl-24138881

ABSTRACT

Macrophages possess numerous mechanisms to combat microbial invasion, including sequestration of essential nutrients, like zinc (Zn). The pleiotropic cytokine granulocyte macrophage-colony stimulating factor (GM-CSF) enhances antimicrobial defenses against intracellular pathogens such as Histoplasma capsulatum, but its mode of action remains elusive. We have found that GM-CSF-activated infected macrophages sequestered labile Zn by inducing binding to metallothioneins (MTs) in a STAT3 and STAT5 transcription-factor-dependent manner. GM-CSF upregulated expression of Zn exporters, Slc30a4 and Slc30a7; the metal was shuttled away from phagosomes and into the Golgi apparatus. This distinctive Zn sequestration strategy elevated phagosomal H⁺ channel function and triggered reactive oxygen species generation by NADPH oxidase. Consequently, H. capsulatum was selectively deprived of Zn, thereby halting replication and fostering fungal clearance. GM-CSF mediated Zn sequestration via MTs in vitro and in vivo in mice and in human macrophages. These findings illuminate a GM-CSF-induced Zn-sequestration network that drives phagocyte antimicrobial effector function.


Subject(s)
Granulocyte-Macrophage Colony-Stimulating Factor/pharmacology , Histoplasma/immunology , Histoplasmosis/metabolism , Macrophages, Peritoneal/immunology , Superoxides/metabolism , Zinc/metabolism , Animals , Cation Transport Proteins/genetics , Cation Transport Proteins/immunology , Gene Expression Regulation , Golgi Apparatus/drug effects , Golgi Apparatus/immunology , Golgi Apparatus/microbiology , Histoplasma/drug effects , Histoplasmosis/immunology , Histoplasmosis/microbiology , Host-Pathogen Interactions , Humans , Macrophage Activation , Macrophages, Peritoneal/drug effects , Macrophages, Peritoneal/microbiology , Metallothionein/genetics , Metallothionein/immunology , Mice , Mice, Transgenic , NADPH Oxidases/genetics , NADPH Oxidases/immunology , Phagosomes/drug effects , Phagosomes/immunology , Phagosomes/microbiology , STAT3 Transcription Factor/genetics , STAT3 Transcription Factor/immunology , STAT5 Transcription Factor/genetics , STAT5 Transcription Factor/immunology , Signal Transduction , Superoxides/immunology , Zinc/immunology
4.
Am J Dent ; 35(5): 268-272, 2022 Oct.
Article in English | MEDLINE | ID: mdl-36261408

ABSTRACT

PURPOSE: To evaluate the microbial air quality during dental clinical procedures in a large clinical setting with increasing patient capacity. METHODS: This was a single-center, observational study design evaluating the microbial air quality and aerosol distribution during normal clinical sessions at 5% (sessions 1 and 2) and at > 50% (session 3) treatment capacity of dental aerosol generating procedures. Sessions 1 and 2 were evaluated on the same day with a 30-minute fallow time between the sessions. Session 3 was evaluated on a separate day. For each session, passive air-sampling technique was performed for three collection periods: baseline, treatment, and post-treatment. Blood agar plates were collected and incubated at 37°C for 48 hours. Colonies were counted using an automatic colony counter. Mean colony forming units (CFU) per plate were converted to CFU/m²/h. RESULTS: Kruskal Wallis test was performed to compare the mean CFU/m²/h between the clinic sessions. Statistically significant differences were observed between sessions 1 and 2 (P< 0.05), but not between sessions 2 and 3 (P> 0.05). Combining all clinical sessions, the mean CFU/m²/h were 977 (baseline), 873 (treatment), and 1,631 (post-treatment) for the collection periods. A decrease-to-increase CFU/m²/h trend was observed from baseline to treatment, and from treatment to post-treatment that was observed for all clinic sessions and was irrespective to treatment capacity. Higher amounts of CFU/m²/h were found near the air exhaust outlets for all three clinic sessions. Microbial aerosol distribution is most likely due to the positions and power levels of the air inlets and outlets, and to a lesser extent with patient treatment capacity. CLINICAL SIGNIFICANCE: Dental clinics should be designed and optimized to minimize the risk of airborne transmissions. The results of this study emphasize the need to evaluate dental clinic ventilation systems.


Subject(s)
Air Microbiology , Air Pollution , Humans , Dental Clinics , Agar , Aerosols , Colony Count, Microbial
5.
Drug Metab Dispos ; 48(6): 515-520, 2020 06.
Article in English | MEDLINE | ID: mdl-32303576

ABSTRACT

The cytosolic sulfotransferases (SULTs) metabolize a variety of xenobiotic and endogenous substrates. Several SULTs are expressed in the fetus, implying that these enzymes have important functions during human development. We recently reported that while SULT1C4 mRNA is abundant in prenatal human liver specimens, SULT1C4 protein is barely detectable. Two coding transcript variants (TVs) of SULT1C4 are indexed in GenBank, TV1 (full-length) and TV2 (lacking exons 3 and 4). The purpose of this study was to evaluate expression of the individual TVs as a clue for understanding the discordance between mRNA and protein levels. Reverse-transcription polymerase chain reaction was initially performed to identify TVs expressed in intestinal and hepatic cell lines. This analysis generated fragments corresponding to TV1, TV2, and a third variant that lacked exon 3 (E3DEL). Using reverse-transcription quantitative polymerase chain reaction assays designed to quantify TV1, TV2, or E3DEL individually, all three TVs were more highly expressed in prenatal than postnatal specimens. TV2 levels were ∼fivefold greater than TV1, while E3DEL levels were minimal. RNA sequencing (RNA-seq) analysis of another set of liver specimens confirmed that TV1 and TV2 levels were highest in prenatal liver, with TV2 higher than TV1. RNA-seq also detected a noncoding RNA, which was also more abundant in prenatal liver. Transfection of HEK293T cells with plasmids expressing individual Asp-Tyr-Lys-Asp-Asp-Asp-Asp-Lys-tagged SULT1C4 isoforms demonstrated that TV1 produced much more protein than did TV2. These data suggest that the lack of correspondence between SULT1C4 mRNA and protein levels in human liver is likely attributable to the inability of the more abundant TV2 to produce stable protein. SIGNIFICANCE STATEMENT: Cytosolic sulfotransferases (SULTs) metabolize a variety of xenobiotic and endogenous substrates, and several SULTs are highly expressed in the fetus, implying that they have important functions during human development. SULT1C4 is highly expressed in prenatal liver at the mRNA level but not the protein level. This study provides an explanation for this discordance by demonstrating that the predominant SULT1C4 transcript is a variant that produces relatively little protein.


Subject(s)
Gene Expression Regulation, Developmental , Liver/enzymology , RNA, Messenger/metabolism , Sulfotransferases/genetics , Exons/genetics , HEK293 Cells , Humans , Protein Isoforms/genetics , Protein Isoforms/metabolism , RNA-Seq , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Sulfotransferases/metabolism
6.
Paediatr Anaesth ; 30(8): 867-873, 2020 08.
Article in English | MEDLINE | ID: mdl-32452092

ABSTRACT

BACKGROUND: Uncooperative pediatric mask induction is linked to perioperative anxiety. Although some risk factors for uncooperative inductions have been reported, there are no large cohort studies that identify intrinsic patient characteristics associated with cooperation. AIM: The primary aim was to identify patient characteristics associated with cooperative mask inductions. The secondary aim was to determine whether preoperative interventions were associated with increased cooperation. METHODS: This retrospective cohort study included patients 2-11 years old and ASA class I-IV who underwent mask induction. Our primary outcome of interest was cooperation with mask induction, which was correlated against the Induction Compliance Checklist. The variables analyzed for association with cooperation were age, sex, ASA class, class of surgery, preferred language, and race. Interventions examined for association with induction cooperation included premedication with midazolam, exposure to distraction technology, parental presence, and the presence of a Child Life Specialist. Multivariate mixed-effects logistic regression was used to assess the relationship between patient characteristics and cooperation. A separate multivariate mixed-effects logistic regression was used to examine the association between preoperative interventions and cooperation. RESULTS: 9692 patients underwent 23 474 procedures during the study period. 3372 patients undergoing 5980 procedures met inclusion criteria. The only patient characteristic associated with increased cooperation was age (OR 1.20, p-value 0.03). Involvement of Child Life Specialists was associated with increased cooperation (OR 4.44, p-value = 0.048) while parental/guardian presence was associated with decreased cooperation (OR 0.38, p-value = 0.002). CONCLUSION: In this cohort, increasing age was the only patient characteristic found to be associated with increased cooperation with mask induction. Preoperative intervention by a Child Life Specialists was the sole intervention associated with improved cooperation.


Subject(s)
Anesthesia, General , Midazolam , Anxiety , Child , Humans , Premedication , Retrospective Studies
7.
J Oral Implantol ; 46(5): 496-505, 2020 Oct 01.
Article in English | MEDLINE | ID: mdl-32315419

ABSTRACT

This 1-year prospective study evaluated horizontal and vertical facial gingival tissue changes after immediate implant placement and provisionalization (IIPP) with and without bone graft in the implant-socket gap (ISG). During IIPP, 10 patients received bone graft material in the ISG (G group), while the other 10 patients did not (NG group). The implants were evaluated for implant stability quotient (ISQ), modified plaque index (mPI), modified bleeding index (mBI), marginal bone level (MBL), facial gingival level (FGL), and facial gingival profile (FGP) changes. The mean ISQ value at 9-month follow-up was statistically significantly greater than on the day of implant surgery (P < .05). The mPI and mBI scores demonstrated that patients were able to maintain a good level of hygiene. There were no statistically significant differences in the mean MBL changes between the G and NG groups (P > .05). There were statistically significant differences in FGL changes between the G (-0.77 mm) and NG (-1.35 mm) groups (P = .035). There were no statistically significant differences in FGP changes between the G and NG groups (P > .05). However, statistically significant differences were noted in FGP change between the 3-12 and 0-12 month intervals in both groups (P < .05). Within the limitations of this study, although no significant differences were noted in FGP changes between groups, G group experienced significantly less FGL changes than NG group. Bone graft material placement into ISG seems to be advantageous for tissue preservation during IIPP. However, future long-term studies, with larger sample size, are needed to validate the efficacy of such procedure.


Subject(s)
Dental Implants, Single-Tooth , Immediate Dental Implant Loading , Bone Transplantation , Dental Plaque Index , Esthetics, Dental , Gingiva , Humans , Maxilla , Prospective Studies , Tooth Extraction , Tooth Socket , Treatment Outcome
8.
Drug Metab Dispos ; 47(6): 592-600, 2019 06.
Article in English | MEDLINE | ID: mdl-30885913

ABSTRACT

The liver is the predominant organ of metabolism for many endogenous and foreign chemicals. Cytosolic sulfotransferases (SULTs) catalyze the sulfonation of drugs and other xenobiotics, as well as hormones, neurotransmitters, and sterols, with consequences that include enhanced drug elimination, hormone inactivation, and procarcinogen bioactivation. SULTs are classified into six gene families, but only SULT1 and SULT2 enzymes are expressed in human liver. We characterized the developmental expression patterns of SULT1 and SULT2 mRNAs and proteins in human liver samples using reverse transcription quantitative polymerase chain reaction (RT-qPCR), RNA sequencing, and targeted quantitative proteomics. Using a set of prenatal, infant, and adult liver specimens, RT-qPCR analysis demonstrated that SULT1A1 (transcript variant 1) expression did not vary appreciably during development; SULT1C2, 1C4, and 1E1 mRNA levels were highest in prenatal and/or infant liver, and 1A2, 1B1, and 2A1 mRNA levels were highest in infant and/or adult. Hepatic SULT1A1 (transcript variant 5), 1C3, and 2B1 mRNA levels were low regardless of developmental stage. Results obtained with RNA sequencing of a different set of liver specimens (prenatal and pediatric) were generally comparable results to those of the RT-qPCR analysis, with the additional finding that SULT1A3 expression was highest during gestation. Analysis of SULT protein content in a library of human liver cytosols demonstrated that protein levels generally corresponded to the mRNAs, with the major exception that SULT1C4 protein levels were much lower than expected based on mRNA levels. These findings further support the concept that hepatic SULTs play important metabolic roles throughout the human life course, including early development.


Subject(s)
Cytosol/metabolism , Liver/metabolism , Sulfotransferases/metabolism , Adolescent , Adult , Female , Humans , Infant , Infant, Newborn , Male , Middle Aged , RNA, Messenger/metabolism , Young Adult
9.
Inflamm Res ; 68(12): 993-998, 2019 Dec.
Article in English | MEDLINE | ID: mdl-31511910

ABSTRACT

BACKGROUND: Neuroinflammation and toll-like receptors (TLR) of the innate immune system have been implicated in epilepsy. We previously reported high levels of microRNAs miR-142-3p and miR-223-3p in epileptogenic brain tissue resected for the treatment of intractable epilepsy in children with tuberous sclerosis complex (TSC). As miR-142-3p has recently been reported to be a ligand and activator of TLR7, a detector of exogenous and endogenous single-stranded RNA, we evaluated TLR7 expression and downstream IL23A activation in surgically resected TSC brain tissue. METHODS: Gene expression analysis was performed on cortical tissue obtained from surgery of TSC children with pharmacoresistent epilepsy. Expression of TLRs 2, 4 and 7 was measured using NanoString nCounter assays. Real-time quantitative PCR was used to confirm TLR7 expression and compare TLR7 activation, indicated by IL-23A levels, to levels of miR-142-3p. Protein markers characteristic for TLR7 activation were assessed using data from our existing quantitative proteomics dataset of TSC tissue. Capillary electrophoresis Western blots were used to confirm TLR7 protein expression in a subset of samples. RESULTS: TLR7 transcript expression was present in all TSC specimens. The signaling competent form of TLR7 protein was detected in the membrane fraction of each sample tested. Downstream activation of TLR7 was found in epileptogenic lesions having elevated neuroinflammation indicated by clinical neuroimaging. TLR7 activity was significantly associated with tissue levels of miR-142-3p. CONCLUSION: TLR7 activation by microRNAs may contribute to the neuroinflammatory cascade in epilepsy in TSC. Further characterization of this mechanism may enable the combined of use of neuroimaging and TLR7 inhibitors in a personalized approach towards the treatment of intractable epilepsy.


Subject(s)
Epilepsy/genetics , MicroRNAs/genetics , Toll-Like Receptor 7/genetics , Tuberous Sclerosis/genetics , Child , Child, Preschool , Female , Gene Expression , Humans , Infant , Male , Toll-Like Receptor 2/genetics , Toll-Like Receptor 4/genetics
10.
J Immunol ; 197(5): 1864-76, 2016 09 01.
Article in English | MEDLINE | ID: mdl-27465530

ABSTRACT

Zinc (Zn) is an essential metal for development and maintenance of both the innate and adaptive compartments of the immune system. Zn homeostasis impacts maturation of dendritic cells (DCs) that are important in shaping T cell responses. The mechanisms by which Zn regulates the tolerogenic phenotype of DCs remain largely unknown. In this study, we investigated the effect of Zn on DC phenotype and the generation of Foxp3(+) regulatory T cells (Tregs) using a model of Histoplasma capsulatum fungal infection. Exposure of bone marrow-derived DCs to Zn in vitro induced a tolerogenic phenotype by diminishing surface MHC class II (MHCII) and promoting the tolerogenic markers, programmed death-ligand (PD-L)1, PD-L2, and the tryptophan degrading enzyme, IDO. Zn triggered tryptophan degradation by IDO and kynurenine production by DCs and strongly suppressed the proinflammatory response to stimulation by TLR ligands. In vivo, Zn supplementation and subsequent H. capsulatum infection supressed MHCII on DCs, enhanced PD-L1 and PD-L2 expression on MHCII(lo) DCs, and skewed the Treg-Th17 balance in favor of Foxp3(+) Tregs while decreasing Th17 cells. Thus, Zn shapes the tolerogenic potential of DCs in vitro and in vivo and promotes Tregs during fungal infection.


Subject(s)
Dendritic Cells/drug effects , Histoplasmosis/immunology , Immune Tolerance , T-Lymphocytes, Regulatory/drug effects , Th17 Cells/drug effects , Zinc/pharmacology , Animals , Bone Marrow Cells/drug effects , Dendritic Cells/immunology , Genes, MHC Class II/immunology , Histoplasma/immunology , Histoplasma/physiology , Indoleamine-Pyrrole 2,3,-Dioxygenase/genetics , Indoleamine-Pyrrole 2,3,-Dioxygenase/metabolism , Kynurenine/metabolism , Lymphocyte Activation , Mice , Phenotype , Programmed Cell Death 1 Ligand 2 Protein/genetics , Programmed Cell Death 1 Ligand 2 Protein/metabolism , T-Lymphocytes, Regulatory/immunology , Th17 Cells/immunology , Tryptophan/metabolism , Zinc/physiology
11.
Ann Vasc Surg ; 51: 10-17, 2018 Aug.
Article in English | MEDLINE | ID: mdl-29655814

ABSTRACT

INTRODUCTION: We aimed to compare the safety and efficacy of 5 arterial closure devices in an outpatient endovascular surgery center. METHODS: We retrospectively reviewed all cases using femoral arterial access performed between January 2012 and December 2013. Five different arterial closure devices (AngioSeal, Perclose, StarClose, ExoSeal, and Mynx) were used by 7 endovascular surgeons. All femoral arteries were accessed with 6F sheaths under ultrasound guidance. All patients received systemic anticoagulation with sodium heparin (70 IU/kg). Sheath-shot angiograms of all arterial punctures were taken before deploying closure devices. Device failure was defined as any partial or complete failure requiring additional closure assistance. Minor complication was defined as any event that occurred because of incomplete hemostasis but did not result in hospitalization, including hematoma, hypotension, bleeding, arterial dissection, or extended recovery. Major complication was defined as any event that occurred because of incomplete hemostasis requiring inpatient management. Any device failure was identified per device and per surgeon. Device safety, efficacy, and relationships between other variables were analyzed using a binomial logistic regression. Results with P values < 0.05 were considered to be statistically significant. RESULTS: During the study period, there were a total of 3142 endovascular procedures, including 1976 arterial cases (62.9%). Out of 1898 femoral artery punctures, closure devices were used in 1810 (95.4%), which forms the basis of this report. Device failure occurred in 151 cases (8.34%), and minor complications occurred in 53 cases (2.93%). There were 11 hospitalizations (0.61%). AngioSeal had both the lowest device failure rate (3.5%) and minor complication rate (1.3%). Our data showed a significant difference between the respective arterial closure devices for device failure rate (P = 0.007) and minor complication rate (P = 0.049), but not for major complication rate (P = 0.199). No significant difference was observed between surgeons for device failure (P = 0.798), minor complication (P = 0.218), or major complication rate (P = 0.899). CONCLUSIONS: With the lowest device failure and minor complication rate, AngioSeal is a consistently well-performing arterial closure device in the office surgical suite setting.


Subject(s)
Ambulatory Surgical Procedures , Catheterization, Peripheral , Endovascular Procedures , Hematoma/prevention & control , Hemostatic Techniques/instrumentation , Postoperative Hemorrhage/prevention & control , Vascular Closure Devices , Aged , Ambulatory Surgical Procedures/adverse effects , Catheterization, Peripheral/adverse effects , Endovascular Procedures/adverse effects , Equipment Design , Equipment Failure , Female , Hematoma/etiology , Hemostatic Techniques/adverse effects , Hospitalization , Humans , Male , Middle Aged , Postoperative Hemorrhage/etiology , Punctures , Retrospective Studies , Risk Factors , Treatment Outcome
12.
Int J Mol Sci ; 19(10)2018 Sep 20.
Article in English | MEDLINE | ID: mdl-30241319

ABSTRACT

Intracellular signaling is controlled to a large extent by the phosphorylation status of proteins. To determine how human breast cells can be reprogrammed during tumorigenic progression, we profiled cell lines in the MCF10A lineage by phosphoproteomic analyses. A large cluster of proteins involved in RNA splicing were hypophosphorylated as cells progressed to a hyperplastic state, and then hyperphosphorylated after progression to a fully metastatic phenotype. A comprehensive transcriptomic approach was used to determine whether alterations in splicing factor phosphorylation status would be reflected in changes in mRNA splicing. Results indicated that the degree of mRNA splicing trended with the degree of tumorigenicity of the 4 cell lines tested. That is, highly metastatic cell cultures had the greatest number of genes with splice variants, and these genes had greater fluctuations in expression intensities. Genes with high splicing indices were mapped against gene ontology terms to determine whether they have known roles in cancer. This group showed highly significant associations for angiogenesis, cytokine-mediated signaling, cell migration, programmed cell death and epithelial cell differentiation. In summary, data from global profiling of a human model of breast cancer development suggest that therapeutics should be developed which target signaling pathways that regulate RNA splicing.


Subject(s)
Alternative Splicing , Breast Neoplasms/pathology , Carcinogenesis/metabolism , Breast Neoplasms/genetics , Breast Neoplasms/metabolism , Cell Communication , Cell Line, Tumor , Cellular Reprogramming , Humans , Phosphorylation , Signal Transduction , Transcriptome
13.
BMC Immunol ; 18(1): 37, 2017 07 17.
Article in English | MEDLINE | ID: mdl-28716125

ABSTRACT

BACKGROUND: Epidemiological evidence and animal models suggest that exposure to low and non-neurotoxic concentrations of mercury may contribute to idiosyncratic autoimmune disease. Since defects in function and signaling in B cells are often associated with autoimmunity, we investigated whether mercury exposure might alter B cell responsiveness to self-antigens by interfering with B cell receptor (BCR) signal transduction. In this study we determined the effects of mercury on the protein tyrosine kinase SYK, a critical protein involved in regulation of the BCR signaling pathway. METHODS: Phosphorylation sites of murine SYK were mapped before and after treatment of WEHI cell cultures with mercury, or with anti-IgM antibody (positive control) or pervanadate (a potent phosphatase inhibitor). Phosphopeptides were enriched by either titanium dioxide chromatography or anti-phosphotyrosine immunoaffinity, and analyzed by liquid chromatography-mass spectrometry. Select SYK phosphosite cluster regions were profiled for responsiveness to treatments using multiple reaction monitoring (MRM) methodology. RESULTS: A total of 23 phosphosites were identified with high probability in endogenous SYK, including 19 tyrosine and 4 serine residues. For 10 of these sites phosphorylation levels were increased following BCR activation. Using MRM to profile changes in phosphorylation status we found that 4 cluster regions, encompassing 8 phosphosites, were activated by mercury and differentially responsive to all 3 treatments. Phosphorylation of tyrosine-342 and -346 residues were most sensitive to mercury exposure. This cluster is known to propagate normal BCR signal transduction by recruiting adaptor proteins such as PLC-γ and Vav-1 to SYK during formation of the BCR signalosome. CONCLUSIONS: Our data shows that mercury alters the phosphorylation status of SYK on tyrosine sites known to have a role in promoting BCR signals. Considering the importance of SYK in the BCR signaling pathway, these data suggest that mercury can alter BCR signaling in B cells, which might affect B cell responsiveness to self-antigen and have implications with respect to autoimmunity and autoimmune disease.


Subject(s)
B-Lymphocytes/drug effects , B-Lymphocytes/enzymology , Mercury/toxicity , Phosphorylation/drug effects , Signal Transduction/drug effects , Syk Kinase/metabolism , Animals , Antibodies, Anti-Idiotypic/pharmacology , B-Lymphocytes/immunology , B-Lymphocytes/metabolism , Cell Line, Tumor , Chromatography, High Pressure Liquid , Dose-Response Relationship, Drug , Mice , Peptide Fragments/chemistry , Peptide Fragments/metabolism , Protein Processing, Post-Translational/drug effects , Receptors, Antigen, B-Cell/agonists , Receptors, Antigen, B-Cell/drug effects , Receptors, Antigen, B-Cell/metabolism , Syk Kinase/antagonists & inhibitors , Syk Kinase/chemistry , Tandem Mass Spectrometry , Tyrosine/metabolism , Vanadates/pharmacology
14.
J Neural Transm (Vienna) ; 124(1): 13-23, 2017 01.
Article in English | MEDLINE | ID: mdl-27145767

ABSTRACT

Spinal muscular atrophy is an autosomal recessive motor neuron disease caused by a genetic defect carried by as many as one in 75 people. Unlike most neurological disorders, we know exactly what the genetic basis is of the disorder, but in spite of this, have little understanding of why the low levels of one protein, survival motor neuron protein, results in the specific progressive die back of only one cell type in the body, the motor neuron. Given the fact that all cells in the body of a patient with spinal muscular atrophy share the same low abundance of the protein throughout development, an appropriate approach is to ask how lower levels of survival motor neuron protein affects the proteome of embryonic stem cells prior to development. Convergent biostatistical analyses of a discovery proteomic analysis of these cells provide results that are consistent with the pathomechanistic fate of the developed motor neuron.


Subject(s)
Embryonic Stem Cells/metabolism , Proteome , Survival of Motor Neuron 1 Protein/metabolism , Animals , Cells, Cultured , Developmental Disabilities/metabolism , Mass Spectrometry , Mice , Muscular Atrophy, Spinal/metabolism , Proteomics
15.
Pediatr Nephrol ; 32(6): 1029-1033, 2017 06.
Article in English | MEDLINE | ID: mdl-28188435

ABSTRACT

BACKGROUND: Using a proteomic approach, we aimed to identify and compare the urinary excretion of proteins involved in lipid transport and metabolism in children with kidney stones and hypercalciuria (CAL), hypocitraturia (CIT), and normal metabolic work-up (NM), and in healthy controls (HCs). Additionally, we aimed to confirm these results using ELISA, and to examine the relationship between the urinary excretion of selected proteins with demographic, dietary, blood, and urinary parameters. METHODS: Prospective, controlled, pilot study of pooled urine from CAL, CIT, and NM versus age- and gender-matched HCs, using liquid chromatography-mass spectrometry. Relative protein abundance was estimated using spectral counting. Results were confirmed by ELISA performed on individual samples. RESULTS: Of the 1,813 proteins identified, 230 met the above criteria. Of those, 5 proteins (apolipoprotein A-II [APOA2]; apolipoprotein A-IV [APOA4]; apolipoprotein C-III [APOA3]; fatty acid-binding protein, liver [FABPL]; fatty acid-binding protein, adipocyte [FABP4]) involved in lipid metabolism and transport were found in the CAL group, with significant differences compared with HCs. ELISA analysis indicated statistically significant differences in the urinary excretion of APOC3, APOA4, and FABPL in the CAL group compared with HCs. Twenty-four-hour urinary calcium excretion correlated significantly with concentrations of ApoC3 (r = 0.77, p < 0.001), and FABPL (r = 0.80, p = 0.005). CONCLUSIONS: We provide proteomic data showing increased urinary excretion of lipid metabolism/transport-related proteins in children with kidney stones and hypercalciuria. These findings suggest that abnormalities in lipid metabolism might play a role in kidney stone formation.


Subject(s)
Apolipoproteins/urine , Hypercalciuria/urine , Kidney Calculi/urine , Renal Elimination , Adolescent , Apolipoproteins/metabolism , Calcium/metabolism , Calcium/urine , Child , Chromatography, Liquid , Citrates/urine , Enzyme-Linked Immunosorbent Assay , Fatty Acid-Binding Proteins/metabolism , Female , Humans , Hypercalciuria/metabolism , Kidney Calculi/metabolism , Male , Mass Spectrometry , Pilot Projects , Prospective Studies , Proteomics/methods
16.
Vascular ; 25(2): 115-122, 2017 Apr.
Article in English | MEDLINE | ID: mdl-27381926

ABSTRACT

Introduction The office-based endovascular facility has increased in number recently due in part to expedient patient experience. This study analyzed treatment outcomes of procedures performed in our office-based endovascular suite. Methods Treatment outcomes of 5134 consecutive procedures performed in our office-based endovascular suites from 2006 to 2013 were analyzed. Five sequential groups (group I-V) of 1000 consecutive interventions were compared with regard to technical success and treatment outcomes. Results Our patients included 2856 (56%) females and 2267 (44%) males. Procedures performed included diagnostic arteriogram, arterial interventions, venous interventions, dialysis access interventions, and venous catheter management, which were 1024 (19.9%), 1568 (30.6%), and 3073 (60.0%), 621(12.1%), and 354 (6.9%), respectively. The complication rates for group I, II, III, IV, and V were 3%, 1.5%, 1%, 1.1%, and 0.7%, respectively. The complication rate was higher in group I when compared to each of the remaining four groups ( p < 0.05). Nine patients (0.18%) died within the 30-day period following their procedures, and none were procedure related. Conclusions Endovascular procedure can be performed safely in an office-based facility with excellent outcomes. Lessons learned in establishing office-based endovascular suites with efforts to reduce procedural complications and optimize quality patient care are discussed.


Subject(s)
Ambulatory Surgical Procedures , Angiography , Endovascular Procedures , Office Visits , Process Assessment, Health Care , Radiography, Interventional , Vascular Diseases/diagnostic imaging , Vascular Diseases/surgery , Adolescent , Adult , Aged , Aged, 80 and over , Ambulatory Surgical Procedures/adverse effects , Angiography/adverse effects , Catheterization, Central Venous , Dialysis , Endovascular Procedures/adverse effects , Endovascular Procedures/instrumentation , Female , Humans , Male , Middle Aged , Patient Safety , Postoperative Complications/etiology , Predictive Value of Tests , Radiography, Interventional/adverse effects , Retrospective Studies , Risk Factors , Stents , Texas , Time Factors , Treatment Outcome , Young Adult
17.
Med Mycol ; 54(8): 865-75, 2016 Nov 01.
Article in English | MEDLINE | ID: mdl-27335059

ABSTRACT

Histoplasma capsulatum (Hc) exists in the soil and is capable of adapting to the shift in environment during infection to ensure survival. Yeast encounter a restrictive host environment low in nutrients such as zinc. In this study we functionally analyzed a putative zinc regulated transporter, HcZrt2, in zinc limiting conditions by complementation of HcZrt2 and gene knockdown through RNA interference (RNAi). Complementation analysis demonstrated HcZrt2's ability to functionally replace the characterized Saccharomyces cerevisiae zinc plasma membrane transporters Zrt1 and Zrt2 in zinc deficient medium. Gene silencing revealed that HcZrt2 is essential for growth in zinc deficient medium and plays a role in zinc accumulation. Fungal burden was reduced in mice infected with HcZrt2 silenced strains compared to a control strain. Sixty-seven percent of mice infected with a lethal dose of HcZrt2-RNAi#1 survived, and 100% of mice infected with HcZrt2-RNAi#2 withstood lethal infection. Our data suggest that HcZrt2 is a vital part of zinc homeostasis and essential for the pathogenesis of histoplasmosis.


Subject(s)
Cation Transport Proteins/metabolism , Histoplasma/physiology , Histoplasmosis/microbiology , Virulence Factors/metabolism , Zinc/metabolism , Animals , Cation Transport Proteins/genetics , Cell Survival , Colony Count, Microbial , Culture Media/chemistry , Disease Models, Animal , Gene Deletion , Gene Knockdown Techniques , Genetic Complementation Test , Histoplasma/genetics , Histoplasma/growth & development , Male , Mice, Inbred C57BL , RNA Interference , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae/growth & development , Survival Analysis , Virulence Factors/genetics
18.
Anal Bioanal Chem ; 407(9): 2433-7, 2015 Mar.
Article in English | MEDLINE | ID: mdl-25651903

ABSTRACT

Various endogenous and exogenous agents drive the un-directed formation of covalent bonds between proteins and DNA. These complex molecules are of great biological relevance, as can derive in mutations, but are difficult to study because of their heterogeneous chemical properties. New analytical approaches with sufficient detection capabilities to detect and quantify these compounds can help to standardize study models based on synthesized standards. The use of atomic spectrometry can provide quantitative information on the DNA-protein cross-link reaction yield along with basic stoichiometry of the products, based on internal elemental tags, sulfur from Cys and Met amino acids, and phosphorus from the DNA. A new instrumental approach to remove isobaric and polyatomic interferences from (31)P(+) and (32)S(+) was developed recently, with state-of-the-art for interference removal that captures (31)P(+) in Q1; it reacts with O2 in an octopole collision-reaction cell generating (47)PO(+), therefore allowing detection in Q3 without (31)NOH(+)/(48)Ca/(47)Ti interferences. Similarly, (32)S(+) is reacted to (48)SO(+), eliminating the polyatomic interferences at m/z = 32. In conjunction with the high resolving power of high-performance liquid chromatography (HPLC), this newer technology was applied by to the product purification of a DNA-protein cross link model and some preliminary structural studies.


Subject(s)
Chromatography, High Pressure Liquid/methods , DNA/chemistry , Phosphorus/analysis , Proteins/chemistry , Sulfur/analysis , Tandem Mass Spectrometry/methods , DNA/chemical synthesis , Molecular Structure
19.
J Environ Manage ; 164: 41-5, 2015 Dec 01.
Article in English | MEDLINE | ID: mdl-26342265

ABSTRACT

To study the phytoremediation capabilities of Pistia stratiotes in silver nanoparticle (AgNP) and silver ion contaminated wastewaters, individual plants were grown in media spiked with different concentrations of silver nanoparticle and silver ions (0.02, 0.2, and 2 mg L(-1)). Control experiments were carried out at the same time for comparison purposes. Visual changes in the plants were also recorded periodically during each experiment. Total silver concentrations were monitored in the media before, during, and at the termination of the experiments. In addition, analysis of total silver in plant root and leaf samples after termination were carried out to determine the effect of the different media concentrations. The results showed that P. stratiotes can survive in AgNP and ions under 0.02 mg L(-1) and contaminants are retained within the plant. The use of P. stratiotes as a phytoremediator shows potential in removing heavy metal nanoparticles and is competitive in its removal of the ion counterpart. Even higher concentrations of silver, regardless of form, can be reduced to lower levels than the World Health Organization's maximum contamination limit.


Subject(s)
Araceae/metabolism , Metal Nanoparticles , Silver/pharmacokinetics , Water Pollutants, Chemical/pharmacokinetics , Biodegradation, Environmental , Plant Leaves/chemistry , Plant Leaves/metabolism , Plant Roots/chemistry , Plant Roots/metabolism , Silver/analysis , Tissue Distribution , Wastewater/analysis , Water Pollutants, Chemical/analysis , Water Pollution/analysis
20.
J Prosthet Dent ; 114(3): 407-13, 2015 Sep.
Article in English | MEDLINE | ID: mdl-26119019

ABSTRACT

STATEMENT OF PROBLEM: Even though high-precision technologies have been used in computer-guided implant surgery, studies have shown that linear and angular deviations between the planned and placed implants can be expected. PURPOSE: The purpose of this study was to evaluate the effect of operator experience on the accuracy of implant placement with a computer-guided surgery protocol. MATERIAL AND METHODS: Ten surgically experienced and 10 surgically inexperienced operators participated in this study. Each operator placed 1 dental implant (Replace Select) on the partially edentulous mandibular model that had been planned with software by following a computer-guided surgery (NobelGuide) protocol. Three-dimensional information of the planned and placed implants were then superimposed. The horizontal and vertical linear deviations at both the apex and platform levels and the angular deviation were measured and compared between the experienced and inexperienced groups with the independent t test with Bonferroni adjustment (α=.01). The magnitude and direction of the horizontal deviations were also measured and recorded. RESULTS: No significant differences were found in the angular and linear deviations between the 2 groups (P>.01). Although not statistically significant (P>.01), the amount of vertical deviation in the coronal direction of the implants placed by the inexperienced operators was about twice that placed by the experienced operators. Overall, buccal apical deviations were most frequent and of the highest magnitude. CONCLUSIONS: When a computer-guided protocol was used, the accuracy of the vertical dimension (depth of implant placement) was most influenced by the operator's level of experience.


Subject(s)
Dental Implants , Jaw, Edentulous, Partially/surgery , Surgery, Computer-Assisted , Computer-Aided Design , Cone-Beam Computed Tomography , Dental Implantation , Humans , Image Processing, Computer-Assisted , Mandible/surgery , Mouth, Edentulous/surgery , Software , User-Computer Interface
SELECTION OF CITATIONS
SEARCH DETAIL