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1.
EMBO J ; 41(4): e109108, 2022 02 15.
Article in English | MEDLINE | ID: mdl-35019161

ABSTRACT

Haploinsufficiency of the progranulin (PGRN)-encoding gene (GRN) causes frontotemporal lobar degeneration (GRN-FTLD) and results in microglial hyperactivation, TREM2 activation, lysosomal dysfunction, and TDP-43 deposition. To understand the contribution of microglial hyperactivation to pathology, we used genetic and pharmacological approaches to suppress TREM2-dependent transition of microglia from a homeostatic to a disease-associated state. Trem2 deficiency in Grn KO mice reduced microglia hyperactivation. To explore antibody-mediated pharmacological modulation of TREM2-dependent microglial states, we identified antagonistic TREM2 antibodies. Treatment of macrophages from GRN-FTLD patients with these antibodies led to reduced TREM2 signaling due to its enhanced shedding. Furthermore, TREM2 antibody-treated PGRN-deficient microglia derived from human-induced pluripotent stem cells showed reduced microglial hyperactivation, TREM2 signaling, and phagocytic activity, but lysosomal dysfunction was not rescued. Similarly, lysosomal dysfunction, lipid dysregulation, and glucose hypometabolism of Grn KO mice were not rescued by TREM2 ablation. Synaptic loss and neurofilament light-chain (NfL) levels, a biomarker for neurodegeneration, were further elevated in the Grn/Trem2 KO cerebrospinal fluid (CSF). These findings suggest that TREM2-dependent microglia hyperactivation in models of GRN deficiency does not promote neurotoxicity, but rather neuroprotection.


Subject(s)
Frontotemporal Lobar Degeneration/pathology , Membrane Glycoproteins/metabolism , Microglia/physiology , Monocytes/metabolism , Progranulins/deficiency , Receptors, Immunologic/metabolism , Animals , Antibodies/immunology , Antibodies/pharmacology , Brain/diagnostic imaging , Brain/physiopathology , Disease Models, Animal , Female , Frontotemporal Lobar Degeneration/metabolism , Humans , Lysosomes/metabolism , Lysosomes/pathology , Male , Membrane Glycoproteins/genetics , Membrane Glycoproteins/immunology , Mice, Inbred C57BL , Mice, Knockout , Microglia/drug effects , Monocytes/drug effects , Receptors, Immunologic/genetics , Receptors, Immunologic/immunology , Syk Kinase/metabolism
2.
Mov Disord ; 39(2): 339-349, 2024 Feb.
Article in English | MEDLINE | ID: mdl-38014556

ABSTRACT

BACKGROUND: Recent studies have advanced our understanding of the genetic drivers of Parkinson's disease (PD). Rare variants in more than 20 genes are considered causal for PD, and the latest PD genome-wide association study (GWAS) identified 90 independent risk loci. However, there remains a gap in our understanding of PD genetics outside of the European populations in which the vast majority of these studies were focused. OBJECTIVE: The aim was to identify genetic risk factors for PD in a South Asian population. METHODS: A total of 674 PD subjects predominantly with age of onset (AoO) ≤50 years (encompassing juvenile, young, or early-onset PD) were recruited from 10 specialty movement disorder centers across India over a 2-year period; 1376 control subjects were selected from the reference population GenomeAsia, Phase 2. We performed various case-only and case-control genetic analyses for PD diagnosis and AoO. RESULTS: A genome-wide significant signal for PD diagnosis was identified in the SNCA region, strongly colocalizing with SNCA region signal from European PD GWAS. PD cases with pathogenic mutations in PD genes exhibited, on average, lower PD polygenic risk scores than PD cases lacking any PD gene mutations. Gene burden studies of rare, predicted deleterious variants identified BSN, encoding the presynaptic protein Bassoon that has been previously associated with neurodegenerative disease. CONCLUSIONS: This study constitutes the largest genetic investigation of PD in a South Asian population to date. Future work should seek to expand sample numbers in this population to enable improved statistical power to detect PD genes in this understudied group. © 2023 Denali Therapeutics and The Authors. Movement Disorders published by Wiley Periodicals LLC on behalf of International Parkinson and Movement Disorder Society.


Subject(s)
Neurodegenerative Diseases , Parkinson Disease , Humans , Middle Aged , Parkinson Disease/epidemiology , Parkinson Disease/genetics , Parkinson Disease/diagnosis , Genetic Predisposition to Disease/genetics , Genome-Wide Association Study , Mutation
3.
Nature ; 535(7611): 303-7, 2016 07 14.
Article in English | MEDLINE | ID: mdl-27383786

ABSTRACT

Cellular mechanisms that mediate steatohepatitis, an increasingly prevalent condition in the Western world for which no therapies are available, are poorly understood. Despite the fact that its synthetic agonists induce fatty liver, the liver X receptor (LXR) transcription factor remains a target of interest because of its anti-atherogenic, cholesterol removal, and anti-inflammatory activities. Here we show that tetratricopeptide repeat domain protein 39B (Ttc39b, C9orf52) (T39), a high-density lipoprotein gene discovered in human genome-wide association studies, promotes the ubiquitination and degradation of LXR. Chow-fed mice lacking T39 (T39(-/-)) display increased high-density lipoprotein cholesterol levels associated with increased enterocyte ATP-binding cassette transporter A1 (Abca1) expression and increased LXR protein without change in LXR messenger RNA. When challenged with a high fat/high cholesterol/bile salt diet, T39(-/-) mice or mice with hepatocyte-specific T39 deficiency show increased hepatic LXR protein and target gene expression, and unexpectedly protection from steatohepatitis and death. Mice fed a Western-type diet and lacking low-density lipoprotein receptor (Ldlr(-/-)T39(-/-)) show decreased fatty liver, increased high-density lipoprotein, decreased low-density lipoprotein, and reduced atherosclerosis. In addition to increasing hepatic Abcg5/8 expression and limiting dietary cholesterol absorption, T39 deficiency inhibits hepatic sterol regulatory element-binding protein 1 (SREBP-1, ADD1) processing. This is explained by an increase in microsomal phospholipids containing polyunsaturated fatty acids, linked to an LXRα-dependent increase in expression of enzymes mediating phosphatidylcholine biosynthesis and incorporation of polyunsaturated fatty acids into phospholipids. The preservation of endogenous LXR protein activates a beneficial profile of gene expression that promotes cholesterol removal and inhibits lipogenesis. T39 inhibition could be an effective strategy for reducing both steatohepatitis and atherosclerosis.


Subject(s)
Atherosclerosis/genetics , Fatty Liver/genetics , Lipoproteins, HDL/deficiency , Lipoproteins, HDL/genetics , Orphan Nuclear Receptors/metabolism , ATP Binding Cassette Transporter 1/metabolism , ATP Binding Cassette Transporter, Subfamily G, Member 5 , ATP Binding Cassette Transporter, Subfamily G, Member 8 , ATP-Binding Cassette Transporters/metabolism , Animals , Atherosclerosis/prevention & control , Atherosclerosis/therapy , Bile Acids and Salts/metabolism , Cholesterol, Dietary/metabolism , Cholesterol, HDL/metabolism , Diet, High-Fat , Fatty Acids, Unsaturated/metabolism , Fatty Liver/prevention & control , Fatty Liver/therapy , Female , Gene Expression Regulation , Hepatocytes/metabolism , Ligands , Lipogenesis/genetics , Lipoproteins/metabolism , Lipoproteins, HDL/metabolism , Lipoproteins, LDL/metabolism , Liver X Receptors , Male , Mice , Orphan Nuclear Receptors/genetics , Phosphatidylcholines/biosynthesis , Phosphatidylcholines/metabolism , Protein Stability , Proteolysis , Receptors, LDL/deficiency , Receptors, LDL/genetics , Sterol Regulatory Element Binding Protein 1/metabolism , Ubiquitination
4.
J Cell Physiol ; 236(7): 5193-5211, 2021 07.
Article in English | MEDLINE | ID: mdl-33368247

ABSTRACT

Phospholipase D (PLD) isoforms PLD1 and PLD2 serve as the primary nodes where diverse signaling pathways converge. However, their isoform-specific functions remain unclear. We showed that PLD1 and PLD2 selectively couple to toll-like receptor 4 (TLR4) and interleukin 4 receptor (IL-4R) and differentially regulate macrophage polarization of M1 and M2 via the LPS-MyD88 axis and the IL-4-JAK3 signaling, respectively. Lipopolysaccharide (LPS) enhanced TLR4 or MyD88 interaction with PLD1; IL-4 induced IL-4R or JAK3 association with PLD2, indicating isozyme-specific signaling events. PLD1 and PLD2 are indispensable for M1 polarization and M2 polarization, respectively. Genetic and pharmacological targeting of PLD1 conferred protection against LPS-induced sepsis, cardiotoxin-induced muscle injury, and skin injury by promoting the shift toward M2; PLD2 ablation intensified disease severity by promoting the shift toward M1. Enhanced Foxp3+ regulatory T cell recruitment also influenced the anti-inflammatory phenotype of Pld1LyzCre macrophages. We reveal a previously uncharacterized role of PLD isoforms in macrophage polarization, signifying potential pharmacological interventions for macrophage modulation.


Subject(s)
Macrophages/physiology , Phospholipase D/metabolism , Wound Healing/physiology , Wounds and Injuries/prevention & control , Animals , Cell Polarity/physiology , Inflammation/pathology , Inflammation/prevention & control , Janus Kinase 3/metabolism , Lipopolysaccharides , Macrophages/immunology , Mice , Mice, Inbred C57BL , Mice, Knockout , Muscles/injuries , Myeloid Differentiation Factor 88/metabolism , Phospholipase D/genetics , Receptors, Interleukin-4/metabolism , Sepsis/immunology , T-Lymphocytes, Regulatory/immunology , Toll-Like Receptor 4/metabolism , Wounds and Injuries/pathology
5.
EMBO J ; 36(22): 3356-3371, 2017 11 15.
Article in English | MEDLINE | ID: mdl-29018038

ABSTRACT

In the amyloidogenic pathway associated with Alzheimer disease (AD), the amyloid precursor protein (APP) is cleaved by ß-secretase to generate a 99-aa C-terminal fragment (C99) that is then cleaved by γ-secretase to generate the ß-amyloid (Aß) found in senile plaques. In previous reports, we and others have shown that γ-secretase activity is enriched in mitochondria-associated endoplasmic reticulum (ER) membranes (MAM) and that ER-mitochondrial connectivity and MAM function are upregulated in AD We now show that C99, in addition to its localization in endosomes, can also be found in MAM, where it is normally processed rapidly by γ-secretase. In cell models of AD, however, the concentration of unprocessed C99 increases in MAM regions, resulting in elevated sphingolipid turnover and an altered lipid composition of both MAM and mitochondrial membranes. In turn, this change in mitochondrial membrane composition interferes with the proper assembly and activity of mitochondrial respiratory supercomplexes, thereby likely contributing to the bioenergetic defects characteristic of AD.


Subject(s)
Alzheimer Disease/metabolism , Amyloid beta-Protein Precursor/metabolism , Endoplasmic Reticulum/metabolism , Intracellular Membranes/metabolism , Mitochondria/metabolism , Alzheimer Disease/pathology , Amyloid Precursor Protein Secretases/metabolism , Animals , Cell Line , Cell Respiration , Endoplasmic Reticulum/ultrastructure , Humans , Intracellular Membranes/ultrastructure , Mice , Mitochondria/ultrastructure , Mutation/genetics , Oxygen Consumption , Presenilins/genetics , Protein Transport , Sphingolipids/metabolism , Up-Regulation
6.
PLoS Biol ; 16(5): e2003864, 2018 05.
Article in English | MEDLINE | ID: mdl-29782498

ABSTRACT

Tether proteins attach the endoplasmic reticulum (ER) to other cellular membranes, thereby creating contact sites that are proposed to form platforms for regulating lipid homeostasis and facilitating non-vesicular lipid exchange. Sterols are synthesized in the ER and transported by non-vesicular mechanisms to the plasma membrane (PM), where they represent almost half of all PM lipids and contribute critically to the barrier function of the PM. To determine whether contact sites are important for both sterol exchange between the ER and PM and intermembrane regulation of lipid metabolism, we generated Δ-super-tether (Δ-s-tether) yeast cells that lack six previously identified tethering proteins (yeast extended synatotagmin [E-Syt], vesicle-associated membrane protein [VAMP]-associated protein [VAP], and TMEM16-anoctamin homologues) as well as the presumptive tether Ice2. Despite the lack of ER-PM contacts in these cells, ER-PM sterol exchange is robust, indicating that the sterol transport machinery is either absent from or not uniquely located at contact sites. Unexpectedly, we found that the transport of exogenously supplied sterol to the ER occurs more slowly in Δ-s-tether cells than in wild-type (WT) cells. We pinpointed this defect to changes in sterol organization and transbilayer movement within the PM bilayer caused by phospholipid dysregulation, evinced by changes in the abundance and organization of PM lipids. Indeed, deletion of either OSH4, which encodes a sterol/phosphatidylinositol-4-phosphate (PI4P) exchange protein, or SAC1, which encodes a PI4P phosphatase, caused synthetic lethality in Δ-s-tether cells due to disruptions in redundant PI4P and phospholipid regulatory pathways. The growth defect of Δ-s-tether cells was rescued with an artificial "ER-PM staple," a tether assembled from unrelated non-yeast protein domains, indicating that endogenous tether proteins have nonspecific bridging functions. Finally, we discovered that sterols play a role in regulating ER-PM contact site formation. In sterol-depleted cells, levels of the yeast E-Syt tether Tcb3 were induced and ER-PM contact increased dramatically. These results support a model in which ER-PM contact sites provide a nexus for coordinating the complex interrelationship between sterols, sphingolipids, and phospholipids that maintain PM composition and integrity.


Subject(s)
Cell Membrane/metabolism , Endoplasmic Reticulum/metabolism , Phospholipids/metabolism , Sterols/metabolism , Lipids/biosynthesis , Membrane Proteins/metabolism , Receptors, Steroid/metabolism , Saccharomyces cerevisiae Proteins/metabolism , Yeasts
7.
FASEB J ; 33(6): 6713-6725, 2019 06.
Article in English | MEDLINE | ID: mdl-30811216

ABSTRACT

Very little is known about how lipid signaling regulates intima hyperplasia after vascular injury. Herein, we report that deletion and pharmacological inhibition of phospholipase D (PLD)2, which generates the signaling lipid phosphatidic acid (PA), reduced neointimal formation in the mouse carotid artery ligation model. PLD2 deficiency inhibits migration of vascular smooth muscle cells (VSMCs) into the intima in mice as well as migration and formation of membrane ruffles in primary VSMCs. PA specifically binds to the IQ motif-containing guanosine triphosphatase-activating protein 1 (IQGAP1) scaffold protein. The binding between PA and IQGAP is required for the plasma membrane recruitment of IQGAP1. Similar to PLD2 inhibition, knockdown of IQGAP1 blocks ruffle formation and migration in VSMCs, which are rescued by expression of the exogenous IQGAP1 but not the PA binding-deficient mutant. These data reveal that the PLD2-PA-IQGAP1 pathway plays an important role in VSMC migration and injury-induced vascular remodeling, and implicate PLD2 as a candidate target for therapeutic interventions.-Wang, Z., Cai, M., Tay, L. W. R., Zhang, F., Wu, P., Huynh, A., Cao, X., Di Paolo, G., Peng, J., Milewicz, D. M., Du, G. Phosphatidic acid generated by PLD2 promotes the plasma membrane recruitment of IQGAP1 and neointima formation.


Subject(s)
Cell Membrane/metabolism , Neointima/etiology , Phosphatidic Acids/pharmacology , Phospholipase D/physiology , Vascular Remodeling/drug effects , Vascular System Injuries/etiology , ras GTPase-Activating Proteins/metabolism , Animals , Cell Membrane/drug effects , Cell Movement , Cell Proliferation , Cells, Cultured , Female , Male , Mice , Mice, Inbred C57BL , Mice, Knockout , Myocytes, Smooth Muscle/drug effects , Myocytes, Smooth Muscle/metabolism , Myocytes, Smooth Muscle/pathology , Neointima/metabolism , Neointima/pathology , Signal Transduction , Vascular System Injuries/metabolism , Vascular System Injuries/pathology , ras GTPase-Activating Proteins/genetics
8.
Proc Natl Acad Sci U S A ; 114(51): 13394-13399, 2017 12 19.
Article in English | MEDLINE | ID: mdl-29196526

ABSTRACT

Membrane phase behavior has been well characterized in model membranes in vitro under thermodynamic equilibrium state. However, the widely observed differences between biological membranes and their in vitro counterparts are placing more emphasis on nonequilibrium factors, including influx and efflux of lipid molecules. The endoplasmic reticulum (ER) is the largest cellular membrane system and also the most metabolically active organelle responsible for lipid synthesis. However, how the nonequilibrium metabolic activity modulates ER membrane phase has not been investigated. Here, we studied the phase behavior of functional ER in the context of lipid metabolism. Utilizing advanced vibrational imaging technique, that is, stimulated Raman scattering microscopy, we discovered that metabolism of palmitate, a prevalent saturated fatty acid (SFA), could drive solid-like domain separation from the presumably uniformly fluidic ER membrane, a previously unknown phenomenon. The potential of various fatty acids to induce solid phase can be predicted by the transition temperatures of their major metabolites. Interplay between saturated and unsaturated fatty acids is also observed. Hence, our study sheds light on cellular membrane biophysics by underscoring the nonequilibrium metabolic status of living cell.


Subject(s)
Endoplasmic Reticulum/metabolism , Membrane Microdomains/metabolism , Animals , COS Cells , Chlorocebus aethiops , Endoplasmic Reticulum/ultrastructure , Fatty Acids/metabolism , HeLa Cells , Humans
9.
Am J Physiol Lung Cell Mol Physiol ; 317(2): L175-L187, 2019 08 01.
Article in English | MEDLINE | ID: mdl-31090437

ABSTRACT

Idiopathic pulmonary fibrosis (IPF) is a pernicious lung disease characterized by alveolar epithelial apoptosis, dysregulated repair of epithelial injury, scar formation, and respiratory failure. In this study, we identified phospholipase D (PLD)-generated phosphatidic acid (PA) signaling in the development of pulmonary fibrosis (PF). Of the PLD isoenzymes, the protein expression of PLD2, but not PLD1, was upregulated in lung tissues from IPF patients and bleomycin challenged mice. Both PLD1 (Pld1-/-)- and PLD2 (Pld2-/-)-deficient mice were protected against bleomycin-induced lung inflammation and fibrosis, thereby establishing the role of PLD in fibrogenesis. The role of PLD1 and PLD2 in bleomycin-induced lung epithelial injury was investigated by infecting bronchial airway epithelial cells (Beas2B) with catalytically inactive mutants of PLD (hPLD1-K898R or mPld2-K758R) or downregulation of expression of PLD1 or PLD2 with siRNA. Bleomycin stimulated mitochondrial (mt) superoxide production, mtDNA damage, and apoptosis in Beas2B cells, which was attenuated by the catalytically inactive mutants of PLD or PLD2 siRNA. These results show a role for PLD1 and PLD2 in bleomycin-induced generation of mt reactive oxygen species, mt DNA damage, and apoptosis of lung epithelial cells in mice. Thus, PLD may be a novel therapeutic target in ameliorating experimental PF in mice.


Subject(s)
Bleomycin/pharmacology , Lung/drug effects , Mitochondria/drug effects , Phospholipase D/metabolism , Animals , DNA Damage/drug effects , DNA, Mitochondrial/drug effects , DNA, Mitochondrial/metabolism , Epithelial Cells/drug effects , Epithelial Cells/metabolism , Humans , Idiopathic Pulmonary Fibrosis/metabolism , Lung/metabolism , Mice, Transgenic , Mitochondria/metabolism , Phospholipase D/drug effects , Reactive Oxygen Species/metabolism
10.
J Biol Chem ; 292(48): 19873-19889, 2017 12 01.
Article in English | MEDLINE | ID: mdl-29021256

ABSTRACT

Amyloid plaques, a neuropathological hallmark of Alzheimer's disease, are largely composed of amyloid ß (Aß) peptide, derived from cleavage of amyloid precursor protein (APP) by ß- and γ-secretases. The endosome is increasingly recognized as an important crossroad for APP and these secretases, with major implications for APP processing and amyloidogenesis. Among various post-translational modifications affecting APP accumulation, ubiquitination of cytodomain lysines may represent a key signal controlling APP endosomal sorting. Here, we show that substitution of APP C-terminal lysines with arginine disrupts APP ubiquitination and that an increase in the number of substituted lysines tends to increase APP metabolism. An APP mutant lacking all C-terminal lysines underwent the most pronounced increase in processing, leading to accumulation of both secreted and intracellular Aß40. Artificial APP ubiquitination with rapalog-mediated proximity inducers reduced Aß40 generation. A lack of APP C-terminal lysines caused APP redistribution from endosomal intraluminal vesicles (ILVs) to the endosomal limiting membrane, with a subsequent decrease in APP C-terminal fragment (CTF) content in secreted exosomes, but had minimal effects on APP lysosomal degradation. Both the increases in secreted and intracellular Aß40 were abolished by depletion of presenilin 2 (PSEN2), recently shown to be enriched on the endosomal limiting membrane compared with PSEN1. Our findings demonstrate that ubiquitin can act as a signal at five cytodomain-located lysines for endosomal sorting of APP. They further suggest that disruption of APP endosomal sorting reduces its sequestration in ILVs and results in PSEN2-mediated processing of a larger pool of APP-CTF on the endosomal membrane.


Subject(s)
Amyloid beta-Peptides/metabolism , Amyloid beta-Protein Precursor/metabolism , Peptide Fragments/metabolism , Presenilin-2/metabolism , Amyloid beta-Protein Precursor/chemistry , Amyloid beta-Protein Precursor/genetics , Arginine/genetics , Cell Line , Endosomes/metabolism , Humans , Lysine/genetics , Mutation , Proteolysis , Ubiquitination
11.
Mol Cell ; 37(3): 370-82, 2010 Feb 12.
Article in English | MEDLINE | ID: mdl-20159556

ABSTRACT

The DENN domain is an evolutionarily ancient protein module. Mutations in the DENN domain cause developmental defects in plants and human diseases, yet the function of this common module is unknown. We now demonstrate that the connecdenn/DENND1A DENN domain functions as a guanine nucleotide exchange factor (GEF) for Rab35 to regulate endosomal membrane trafficking. Loss of Rab35 activity causes an enlargement of early endosomes and inhibits MHC class I recycling. Moreover, it prevents early endosomal recruitment of EHD1, a common component of tubules involved in endosomal cargo recycling. Our data reveal an enzymatic activity for a DENN domain and demonstrate that distinct Rab GTPases can recruit a common protein machinery to various sites within the endosomal network to establish cargo-selective recycling pathways.


Subject(s)
Endosomes/metabolism , Guanine Nucleotide Exchange Factors/physiology , rab GTP-Binding Proteins/physiology , Animals , Biological Transport , COS Cells , Chlorocebus aethiops , Clathrin-Coated Vesicles/metabolism , Endocytosis , Guanine Nucleotide Exchange Factors/chemistry , Guanine Nucleotide Exchange Factors/metabolism , Humans , Protein Interaction Mapping , Protein Structure, Tertiary , Rats , rab GTP-Binding Proteins/chemistry , rab GTP-Binding Proteins/metabolism
12.
Am J Physiol Endocrinol Metab ; 313(2): E121-E133, 2017 08 01.
Article in English | MEDLINE | ID: mdl-28377401

ABSTRACT

Bile acids (BAs) are cholesterol derivatives that regulate lipid metabolism, through their dual abilities to promote lipid absorption and activate BA receptors. However, different BA species have varying abilities to perform these functions. Eliminating 12α-hydroxy BAs in mice via Cyp8b1 knockout causes low body weight and improved glucose tolerance. The goal of this study was to determine mechanisms of low body weight in Cyp8b1-/- mice. We challenged Cyp8b1-/- mice with a Western-type diet and assessed body weight and composition. We measured energy expenditure, fecal calories, and lipid absorption and performed lipidomic studies on feces and intestine. We investigated the requirement for dietary fat in the phenotype using a fat-free diet. Cyp8b1-/- mice were resistant to Western diet-induced body weight gain, hepatic steatosis, and insulin resistance. These changes were associated with increased fecal calories, due to malabsorption of hydrolyzed dietary triglycerides. This was reversed by treating the mice with taurocholic acid, the major 12α-hydroxylated BA species. The improvements in body weight and steatosis were normalized by feeding mice a fat-free diet. The effects of BA composition on intestinal lipid handling are important for whole body energy homeostasis. Thus modulating BA composition is a potential tool for obesity or diabetes therapy.


Subject(s)
Diet, Western/adverse effects , Dietary Fats/metabolism , Fatty Liver/genetics , Intestinal Absorption/genetics , Lipid Metabolism/genetics , Steroid 12-alpha-Hydroxylase/genetics , Weight Gain/genetics , Animals , Bile Acids and Salts/metabolism , Diet, High-Fat , Fatty Liver/metabolism , Male , Mice , Mice, Inbred C57BL , Mice, Knockout
13.
PLoS Genet ; 10(5): e1004333, 2014.
Article in English | MEDLINE | ID: mdl-24831815

ABSTRACT

Inherited hypertrichoses are rare syndromes characterized by excessive hair growth that does not result from androgen stimulation, and are often associated with additional congenital abnormalities. In this study, we investigated the genetic defect in a case of autosomal recessive congenital generalized hypertrichosis terminalis (CGHT) (OMIM135400) using whole-exome sequencing. We identified a single base pair substitution in the 5' donor splice site of intron 32 in the ABC lipid transporter gene ABCA5 that leads to aberrant splicing of the transcript and a decrease in protein levels throughout patient hair follicles. The homozygous recessive disruption of ABCA5 leads to reduced lysosome function, which results in an accumulation of autophagosomes, autophagosomal cargos as well as increased endolysosomal cholesterol in CGHT keratinocytes. In an unrelated sporadic case of CGHT, we identified a 1.3 Mb cryptic deletion of chr17q24.2-q24.3 encompassing ABCA5 and found that ABCA5 levels are dramatically reduced throughout patient hair follicles. Collectively, our findings support ABCA5 as a gene underlying the CGHT phenotype and suggest a novel, previously unrecognized role for this gene in regulating hair growth.


Subject(s)
ATP-Binding Cassette Transporters/genetics , Cholesterol/metabolism , Genetic Diseases, X-Linked/genetics , Hair/growth & development , Hypertrichosis/congenital , Child, Preschool , Cholesterol/genetics , Chromosome Deletion , Female , Genetic Diseases, X-Linked/pathology , Hair/pathology , Humans , Hypertrichosis/genetics , Hypertrichosis/pathology , Infant , Keratinocytes/metabolism , Keratinocytes/pathology , Mutation , Pedigree , Phenotype , RNA Splicing/genetics , Sequence Deletion
14.
J Neurosci ; 35(14): 5724-42, 2015 Apr 08.
Article in English | MEDLINE | ID: mdl-25855184

ABSTRACT

Accumulating evidence from genetic and biochemical studies implicates dysfunction of the autophagic-lysosomal pathway as a key feature in the pathogenesis of Parkinson's disease (PD). Most studies have focused on accumulation of neurotoxic α-synuclein secondary to defects in autophagy as the cause of neurodegeneration, but abnormalities of the autophagic-lysosomal system likely mediate toxicity through multiple mechanisms. To further explore how endolysosomal dysfunction causes PD-related neurodegeneration, we generated a murine model of Kufor-Rakeb syndrome (KRS), characterized by early-onset Parkinsonism with additional neurological features. KRS is caused by recessive loss-of-function mutations in the ATP13A2 gene encoding the endolysosomal ATPase ATP13A2. We show that loss of ATP13A2 causes a specific protein trafficking defect, and that Atp13a2 null mice develop age-related motor dysfunction that is preceded by neuropathological changes, including gliosis, accumulation of ubiquitinated protein aggregates, lipofuscinosis, and endolysosomal abnormalities. Contrary to predictions from in vitro data, in vivo mouse genetic studies demonstrate that these phenotypes are α-synuclein independent. Our findings indicate that endolysosomal dysfunction and abnormalities of α-synuclein homeostasis are not synonymous, even in the context of an endolysosomal genetic defect linked to Parkinsonism, and highlight the presence of α-synuclein-independent neurotoxicity consequent to endolysosomal dysfunction.


Subject(s)
Adenosine Triphosphatases/deficiency , Brain/metabolism , Lysosomes/metabolism , Membrane Proteins/deficiency , Parkinsonian Disorders/genetics , Parkinsonian Disorders/pathology , alpha-Synuclein/metabolism , Adenosine Triphosphatases/genetics , Adenosine Triphosphatases/ultrastructure , Animals , Brain/pathology , Brain/ultrastructure , Cytosol/metabolism , Cytosol/ultrastructure , Disease Models, Animal , Dopaminergic Neurons/pathology , Endosomes/metabolism , Endosomes/ultrastructure , Exploratory Behavior/physiology , Hindlimb Suspension/psychology , Hydrogen-Ion Concentration , Lipids/analysis , Lysosomes/ultrastructure , Male , Membrane Proteins/genetics , Membrane Proteins/ultrastructure , Mice , Mice, Inbred C57BL , Mice, Knockout , Motor Activity/genetics , Nerve Tissue Proteins/metabolism , Parkinsonian Disorders/physiopathology , Postural Balance/genetics , Proton-Translocating ATPases
15.
Biochim Biophys Acta ; 1848(7): 1591-8, 2015 Jul.
Article in English | MEDLINE | ID: mdl-25896659

ABSTRACT

Plasma membrane-derived vesicles are being used in biophysical and biochemical research as a simple, yet native-like model of the cellular membrane. Here we report on the characterization of vesicles produced via two different vesiculation methods from CHO and A431 cell lines. The first method is a recently developed method which utilizes chloride salts to induce osmotic vesiculation. The second is a well established chemical vesiculation method which uses DTT and formaldehyde. We show that both vesiculation methods produce vesicles which contain the lipid species previously reported in the plasma membrane of these cell lines. The two methods lead to small but statistically significant differences in two lipid species only; phosphatidylcholine (PC) and plasmalogen phosphatidylethanolamine (PEp). However, highly significant differences were observed in the degree of incorporation of a membrane receptor and in the degree of retention of soluble cytosolic proteins within the vesicles.


Subject(s)
Cell Membrane/metabolism , Membrane Lipids/metabolism , Membrane Proteins/metabolism , Transport Vesicles/metabolism , Animals , Blotting, Western , CHO Cells , Cell Line, Tumor , Cell Membrane/chemistry , Cholesterol/metabolism , Chromatography, Liquid , Cricetinae , Cricetulus , Dithiothreitol/pharmacology , ErbB Receptors/metabolism , Formaldehyde/pharmacology , Humans , Mass Spectrometry , Microscopy, Confocal , Osmotic Pressure , Phosphatidylcholines/metabolism , Phosphatidylethanolamines/metabolism , Plasmalogens/metabolism , Transport Vesicles/chemistry , Transport Vesicles/drug effects
16.
Nat Rev Neurosci ; 12(5): 284-96, 2011 May.
Article in English | MEDLINE | ID: mdl-21448224

ABSTRACT

Lipid-mediated signalling regulates a plethora of physiological processes, including crucial aspects of brain function. In addition, dysregulation of lipid pathways has been implicated in a growing number of neurodegenerative disorders, such as Alzheimer's disease (AD). Although much attention has been given to the link between cholesterol and AD pathogenesis, growing evidence suggests that other lipids, such as phosphoinositides and phosphatidic acid, have an important role. Regulators of lipid metabolism (for example, statins) are a highly successful class of marketed drugs, and exploration of lipid dysregulation in AD and identification of novel therapeutic agents acting through relevant lipid pathways offers new and effective options for the treatment of this devastating disorder.


Subject(s)
Alzheimer Disease/metabolism , Cholesterol/metabolism , Lipid Metabolism/physiology , Lipids , Alzheimer Disease/drug therapy , Amyloid beta-Peptides/metabolism , Animals , Humans , Hydroxymethylglutaryl-CoA Reductase Inhibitors/therapeutic use , Models, Biological , Signal Transduction/physiology
17.
Am J Pathol ; 184(9): 2450-64, 2014 Sep.
Article in English | MEDLINE | ID: mdl-25046692

ABSTRACT

Myocardial inflammation is critical for ventricular remodeling after ischemia. Phospholipid mediators play an important role in inflammatory processes. In the plasma membrane they are degraded by phospholipase D1 (PLD1). PLD1 was shown to be critically involved in ischemic cardiovascular events. Moreover, PLD1 is coupled to tumor necrosis factor-α signaling and inflammatory processes. However, the impact of PLD1 in inflammatory cardiovascular disease remains elusive. Here, we analyzed the impact of PLD1 in tumor necrosis factor-α-mediated activation of monocytes after myocardial ischemia and reperfusion using a mouse model of myocardial infarction. PLD1 expression was highly up-regulated in the myocardium after ischemia/reperfusion. Genetic ablation of PLD1 led to defective cell adhesion and migration of inflammatory cells into the infarct border zone 24 hours after ischemia/reperfusion injury, likely owing to reduced tumor necrosis factor-α expression and release, followed by impaired nuclear factor-κB activation and interleukin-1 release. Moreover, PLD1 was found to be important for transforming growth factor-ß secretion and smooth muscle α-actin expression of cardiac fibroblasts because myofibroblast differentiation and interstitial collagen deposition were altered in Pld1(-/-) mice. Consequently, infarct size was increased and left ventricular function was impaired 28 days after myocardial infarction in Pld1(-/-) mice. Our results indicate that PLD1 is crucial for tumor necrosis factor-α-mediated inflammation and transforming growth factor-ß-mediated collagen scar formation, thereby augmenting cardiac left ventricular function after ischemia/reperfusion.


Subject(s)
Inflammation/pathology , Myocardial Reperfusion Injury/pathology , Phospholipase D/metabolism , Tumor Necrosis Factor-alpha/metabolism , Animals , Cell Movement/physiology , Cicatrix/metabolism , Cicatrix/pathology , Disease Models, Animal , Enzyme-Linked Immunosorbent Assay , Immunohistochemistry , Inflammation/metabolism , Mice , Mice, Inbred C57BL , Mice, Knockout , Monocytes/enzymology , Myocardial Reperfusion Injury/metabolism , Real-Time Polymerase Chain Reaction , Reverse Transcriptase Polymerase Chain Reaction
18.
Proc Natl Acad Sci U S A ; 109(12): E705-14, 2012 Mar 20.
Article in English | MEDLINE | ID: mdl-22331875

ABSTRACT

Cytosolic proteins can be selectively delivered to lysosomes for degradation through a type of autophagy known as chaperone-mediated autophagy (CMA). CMA contributes to intracellular quality control and to the cellular response to stress. Compromised CMA has been described in aging and in different age-related disorders. CMA substrates cross the lysosomal membrane through a translocation complex; consequently, changes in the properties of the lysosomal membrane should have a marked impact on CMA activity. In this work, we have analyzed the impact that dietary intake of lipids has on CMA activity. We have found that chronic exposure to a high-fat diet or acute exposure to a cholesterol-enriched diet both have an inhibitory effect on CMA. Lysosomes from livers of lipid-challenged mice had a marked decrease in the levels of the CMA receptor, the lysosome-associated membrane protein type 2A, because of loss of its stability at the lysosomal membrane. This accelerated degradation of lysosome-associated membrane protein type 2A, also described as the mechanism that determines the decline in CMA activity with age, results from its increased mobilization to specific lipid regions at the lysosomal membrane. Comparative lipidomic analyses revealed qualitative and quantitative changes in the lipid composition of the lysosomal membrane of the lipid-challenged animals that resemble those observed with age. Our findings identify a previously unknown negative impact of high dietary lipid intake on CMA and underscore the importance of diet composition on CMA malfunction in aging.


Subject(s)
Lipids/chemistry , Lysosomal-Associated Membrane Protein 2/chemistry , Molecular Chaperones/chemistry , Animals , Autophagy , Cathepsins/chemistry , Diet , Fibroblasts/cytology , Lysophospholipids/chemistry , Lysosomes/chemistry , Lysosomes/metabolism , Male , Membrane Microdomains/chemistry , Mice , Mice, Inbred C57BL , Monoglycerides/chemistry , Protein Binding
19.
J Biol Chem ; 288(3): 1856-70, 2013 Jan 18.
Article in English | MEDLINE | ID: mdl-23188818

ABSTRACT

The accumulation of Tau into aggregates is associated with key pathological events in frontotemporal lobe degeneration (FTD-Tau) and Alzheimer disease (AD). Recent data have shown that misfolded Tau can be internalized by cells in vitro (Frost, B., Jacks, R. L., and Diamond, M. I. (2009) J. Biol. Chem. 284, 12845-12852) and propagate pathology in vivo (Clavaguera, F., Bolmont, T., Crowther, R. A., Abramowski, D., Frank, S., Probst, A., Fraser, G., Stalder, A. K., Beibel, M., Staufenbiel, M., Jucker, M., Goedert, M., and Tolnay, M. (2009) Nat. Cell Biol. 11, 909-913; Lasagna-Reeves, C. A., Castillo-Carranza, D. L., Sengupta, U., Guerrero-Munoz, M. J., Kiritoshi, T., Neugebauer, V., Jackson, G. R., and Kayed, R. (2012) Sci. Rep. 2, 700). Here we show that recombinant Tau misfolds into low molecular weight (LMW) aggregates prior to assembly into fibrils, and both extracellular LMW Tau aggregates and short fibrils, but not monomers, long fibrils, nor long filaments purified from brain extract are taken up by neurons. Remarkably, misfolded Tau can be internalized at the somatodendritic compartment, or the axon terminals and it can be transported anterogradely, retrogradely, and can enhance tauopathy in vivo. The internalized Tau aggregates co-localize with dextran, a bulk-endocytosis marker, and with the endolysosomal compartments. Our findings demonstrate that exogenous Tau can be taken up by cells, uptake depends on both the conformation and size of the Tau aggregates and once inside cells, Tau can be transported. These data provide support for observations that tauopathy can spread trans-synaptically in vivo, via cell-to-cell transfer.


Subject(s)
Alzheimer Disease/metabolism , Endosomes/metabolism , Neurons/metabolism , Synaptic Vesicles/metabolism , tau Proteins/chemistry , tau Proteins/metabolism , Alzheimer Disease/pathology , Animals , Biological Transport , Biomarkers/metabolism , Brain Chemistry , Dextrans/metabolism , Endocytosis , Endosomes/pathology , Humans , Kinetics , Mice , Mice, Transgenic , Microscopy, Electron , Molecular Weight , Neurons/pathology , Primary Cell Culture , Protein Binding , Protein Folding , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Synaptic Vesicles/pathology , tau Proteins/genetics
20.
J Biol Chem ; 288(29): 20868-20882, 2013 Jul 19.
Article in English | MEDLINE | ID: mdl-23723072

ABSTRACT

Amyloid ß-peptide (Aß) pathology is an invariant feature of Alzheimer disease, preceding any detectable clinical symptoms by more than a decade. To this end, we seek to identify agents that can reduce Aß levels in the brain via novel mechanisms. We found that (20S)-Rg3, a triterpene natural compound known as ginsenoside, reduced Aß levels in cultured primary neurons and in the brains of a mouse model of Alzheimer disease. The (20S)-Rg3 treatment induced a decrease in the association of presenilin 1 (PS1) fragments with lipid rafts where catalytic components of the γ-secretase complex are enriched. The Aß-lowering activity of (20S)-Rg3 directly correlated with increased activity of phosphatidylinositol 4-kinase IIα (PI4KIIα), a lipid kinase that mediates the rate-limiting step in phosphatidylinositol 4,5-bisphosphate synthesis. PI4KIIα overexpression recapitulated the effects of (20S)-Rg3, whereas reduced expression of PI4KIIα abolished the Aß-reducing activity of (20S)-Rg3 in neurons. Our results substantiate an important role for PI4KIIα and phosphoinositide modulation in γ-secretase activity and Aß biogenesis.


Subject(s)
Amyloid Precursor Protein Secretases/antagonists & inhibitors , Ginsenosides/pharmacology , Membrane Microdomains/metabolism , Phosphotransferases (Alcohol Group Acceptor)/metabolism , Presenilin-1/metabolism , Amyloid Precursor Protein Secretases/metabolism , Amyloid beta-Peptides/metabolism , Animals , CHO Cells , Cricetinae , Cricetulus , Enzyme Activation/drug effects , Ginsenosides/chemistry , Humans , Membrane Microdomains/drug effects , Mice , Mice, Transgenic , Minor Histocompatibility Antigens , Neurons/drug effects , Neurons/metabolism , Neurons/pathology , Phosphatidylinositol 4,5-Diphosphate/metabolism , Protein Binding/drug effects , Protein Structure, Tertiary , Receptors, Nerve Growth Factor/chemistry , Receptors, Nerve Growth Factor/metabolism , Receptors, Notch/chemistry , Receptors, Notch/metabolism , Structure-Activity Relationship
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