ABSTRACT
Low-grade body inflammation is a major cause of osteoarthritis (OA), a common joint disease. Gut dysbiosis may lead to systemic inflammation which can be prevented by probiotic administration. The Lactobacillus delbrueckii subsp. lactis 557 (LDL557) has been demonstrated to have beneficial effects for anti-inflammation. This study investigated the effects of LDL557 on OA progress using monosodium iodoacetate (MIA)-induced OA of rats. Live or heat-killed (HK)-LDL557 of a low or high dose was administrated for two weeks before MIA-induced OA, and then continuously administrated for another six weeks. After taking supplements for eight weeks, OA progress was analyzed. Results showed that MIA induced knee joint swelling, chondrocyte damage, and cartilage degradation, and supplementation with a high dose of LDL557 reduced MIA-induced knee joint swelling, chondrocyte damage, and cartilage degradation. Additionally, MIA increased serum levels of the matrix-degrading enzyme MMP-13, while a high dose of HK-LDL557 decreased it for the controls. Simultaneously, bone turnover markers and inflammatory cytokines of serum were assayed, but no significant differences were found except for a TNF-α decrease from a low dose of live LDL557. These results demonstrated that supplementation with high doses of live LDL557 or HK-LDL557 can reduce the progression of MIA-induced OA in rats.
ABSTRACT
Healing of large calvarial bone defects remains challenging. An RNA-guided Split dCas12a system is previously harnessed to activate long non-coding RNA H19 (lncRNA H19, referred to as H19 thereafter) in bone marrow-derived mesenchymal stem cells (BMSCs). H19 activation in BMSCs induces chondrogenic differentiation, switches bone healing pathways, and improves calvarial bone repair. Since adipose-derived stem cells (ASCs) can be harvested more easily in large quantity, here it is aimed to use ASCs as an alternative cell source. However, H19 activation alone using the Split dCas12a system in ASCs failed to elicit evident chondrogenesis. Therefore, split dCas12a activators are designed more to co-activate other chondroinductive transcription factors (Sox5, Sox6, and Sox9) to synergistically potentiate differentiation. It is found that co-activation of H19/Sox5/Sox6 in ASCs elicited more potent chondrogenic differentiation than activation of Sox5/Sox6/Sox9 or H19 alone. Co-activating H19/Sox5/Sox6 in ASCs significantly augmented in vitro cartilage formation and in vivo calvarial bone healing. These data altogether implicated the potentials of the Split dCas12a system to trigger multiplexed gene activation in ASCs for differentiation pathway reprogramming and tissue regeneration.
Subject(s)
Cell Differentiation , Chondrogenesis , RNA, Long Noncoding , SOXD Transcription Factors , Skull , SOXD Transcription Factors/metabolism , SOXD Transcription Factors/genetics , RNA, Long Noncoding/genetics , RNA, Long Noncoding/metabolism , Animals , Humans , Mesenchymal Stem Cells/metabolism , Mesenchymal Stem Cells/cytology , Adipose Tissue/cytology , Stem Cells/metabolism , Stem Cells/cytology , Osteogenesis/geneticsABSTRACT
Indigo is widely used in textile industries for denim garments dyeing and is mainly produced by chemical synthesis which, however, raises environmental sustainability issues. Bio-indigo may be produced by fermentation of metabolically engineering bacteria, but current methods are economically incompetent due to low titer and the need for an inducer. To address these problems, we first characterized several synthetic promoters in E. coli and demonstrated the feasibility of inducer-free indigo production from tryptophan using the inducer-free promoter. We next coupled the tryptophan-to-indigo and glucose-to-tryptophan pathways to generate a de novo glucose-to-indigo pathway. By rational design and combinatorial screening, we identified the optimal promoter-gene combinations, which underscored the importance of promoter choice and expression levels of pathway genes. We thus created a new E. coli strain that exploited an indole pathway to enhance the indigo titer to 123 mg/L. We further assessed a panel of heterologous tryptophan synthase homologs and identified a plant indole lyase (TaIGL), which along with modified pathway design, improved the indigo titer to 235 mg/L while reducing the tryptophan byproduct accumulation. The optimal E. coli strain expressed 8 genes essential for rewiring carbon flux from glucose to indole and then to indigo: mFMO, ppsA, tktA, trpD, trpC, TaIGL and feedback-resistant aroG and trpE. Fed-batch fermentation in a 3-L bioreactor with glucose feeding further increased the indigo titer (≈965 mg/L) and total quantity (≈2183 mg) at 72 h. This new synthetic glucose-to-indigo pathway enables high-titer indigo production without the need of inducer and holds promise for bio-indigo production.
ABSTRACT
Osteoarthritis (OA) causes joint pain and disability due to the abnormal production of inflammatory cytokines and reactive oxygen species (ROS) in chondrocytes, leading to cell death and cartilage matrix destruction. Selenium (Se) intake can protect cells against oxidative damage. It is still unknown whether Se supplementation is beneficial for OA. This study investigated the effects of Se on sodium iodoacetate (MIA)-imitated OA progress in human chondrocyte cell line (SW1353 cells) and rats. The results showed that 0.3 µM of Se treatment could protect SW1353 cells from MIA-induced damage by the Nrf2 pathway by promoting the gene expression of glutathione-synthesis-related enzymes such as the glutamate-cysteine ligase catalytic subunit, the glutamate-cysteine ligase modifier subunit, and glutathione synthetase. In addition, glutathione, superoxide dismutase, glutathione peroxidase, and glutathione reductase expressions are also elevated to eliminate excessive ROS production. Moreover, Se could downregulate NF-κB, leading to a decrease in cytokines, matrix proteases, and glycosaminoglycans. In the rats, MIA-induced cartilage loss was lessened after 2 weeks of Se supplementation by oral gavage; meanwhile, glutathione synthesis was increased, and the expressions of pro-inflammatory cytokines were decreased. These results suggest that Se intake is beneficial for OA due to its effects of decreasing cartilage loss by enhancing antioxidant capacity and reducing inflammation.
Subject(s)
Cartilage, Articular , Osteoarthritis , Selenium , Humans , Rats , Animals , NF-kappa B/metabolism , Chondrocytes/metabolism , Selenium/metabolism , NF-E2-Related Factor 2/metabolism , Glutamate-Cysteine Ligase/metabolism , Reactive Oxygen Species/metabolism , Osteoarthritis/metabolism , Oxidative Stress , Cytokines/metabolism , Glutathione/metabolism , Cartilage, Articular/metabolismABSTRACT
Candida viswanathii is a promising cell factory for producing dodecanedioic acid (DDA) and other long chain dicarboxylic acids. However, metabolic engineering of C. viswanathii is difficult partly due to the lack of synthetic biology toolkits. Here we developed CRISPR-based approaches for rational genome and metabolic engineering of C. viswanathii. We first optimized the CRISPR system and protocol to promote the homozygous gene integration efficiency to >60%. We also designed a split CRISPR system for one-step integration of multiple genes into C. viswanathii. We uncovered that co-expression of CYP52A19, CPRb and FAO2 that catalyze different steps in the biotransformation enhances DDA production and abolishes accumulation of intermediates. We also unveiled that co-expression of additional enzyme POS5 further promotes DDA production and augments cell growth. We harnessed the split CRISPR system to co-integrate these 4 genes (13.6 kb) into C. viswanathii and generated a stable strain that doubles the DDA titer (224 g/L), molar conversion (83%) and productivity (1.87 g/L/h) when compared with the parent strain. This study altogether identifies appropriate enzymes/promoters to augment dodecane conversion to DDA and implicates the potential of split CRISPR system for metabolic engineering of C. viswanathii.
Subject(s)
Candida , Metabolic Engineering , Candida/genetics , Candida/metabolism , Dicarboxylic Acids/metabolism , CRISPR-Cas SystemsABSTRACT
Calvarial bone healing is challenging, especially for individuals with osteoporosis because stem cells from osteoporotic patients are highly prone to adipogenic differentiation. Based on previous findings that chondrogenic induction of adipose-derived stem cells (ASCs) can augment calvarial bone healing, we hypothesized that activating chondroinductive Sox Trio genes (Sox5, Sox6, Sox9) and repressing adipoinductive genes (C/ebp-α, Ppar-γ) in osteoporotic ASCs can reprogram cell differentiation and improve calvarial bone healing after implantation. However, simultaneous gene activation and repression in ASCs is difficult. To tackle this problem, we built a CRISPR-BiD system for bi-directional gene regulation. Specifically, we built a CRISPR-AceTran system that exploited both histone acetylation and transcription activation for synergistic Sox Trio activation. We also developed a CRISPR interference (CRISPRi) system that exploited DNA methylation for repression of adipoinductive genes. We combined CRISPR-AceTran and CRISPRi to form the CRISPR-BiD system, which harnessed three mechanisms (transcription activation, histone acetylation, and DNA methylation). After delivery into osteoporotic rat ASCs, CRISPR-BiD significantly enhanced chondrogenesis and in vitro cartilage formation. Implantation of the engineered osteoporotic ASCs into critical-sized calvarial bone defects significantly improved bone healing in osteoporotic rats. These results implicated the potential of the CRISPR-BiD system for bi-directional regulation of cell fate and regenerative medicine.
Subject(s)
Bone Regeneration , Chondrogenesis , Adipose Tissue , Animals , Bone Regeneration/genetics , Cell Differentiation/genetics , Chondrogenesis/genetics , Humans , Rats , Stem Cells , Transcriptional ActivationABSTRACT
The advent of simultaneous wireless information and power (SWIPT) has been regarded as a promising technique to provide power supplies for an energy sustainable Internet of Things (IoT), which is of paramount importance due to the proliferation of high data communication demands of low-power network devices. In such networks, a multi-antenna base station (BS) in each cell can be utilized to concurrently transmit messages and energies to its intended IoT user equipment (IoT-UE) with a single antenna under a common broadcast frequency band, resulting in a multi-cell multi-input single-output (MISO) interference channel (IC). In this work, we aim to find the trade-off between the spectrum efficiency (SE) and energy harvesting (EH) in SWIPT-enabled networks with MISO ICs. For this, we derive a multi-objective optimization (MOO) formulation to obtain the optimal beamforming pattern (BP) and power splitting ratio (PR), and we propose a fractional programming (FP) model to find the solution. To tackle the nonconvexity of FP, an evolutionary algorithm (EA)-aided quadratic transform technique is proposed, which recasts the nonconvex problem as a sequence of convex problems to be solved iteratively. To further reduce the communication overhead and computational complexity, a distributed multi-agent learning-based approach is proposed that requires only partial observations of the channel state information (CSI). In this approach, each BS is equipped with a double deep Q network (DDQN) to determine the BP and PR for its UE with lower computational complexity based on the observations through a limited information exchange process. Finally, with the simulation experiments, we verify the trade-off between SE and EH, and we demonstrate that, apart from the FP algorithm introduced to provide superior solutions, the proposed DDQN algorithm also shows its performance gain in terms of utility to be up to 1.23-, 1.87-, and 3.45-times larger than the Advantage Actor Critic (A2C), greedy, and random algorithms, respectively, in comparison in the simulated environment.
ABSTRACT
Thermogenic adipocytes have potential utility for the development of approaches to treat type 2 diabetes and obesity-associated diseases. Although several reports have proved the positive effect of beige and brown adipocyte transplantation in obese mice, translation to human cell therapy needs improvement. Here, we describe the application of CRISPR activation (CRISPRa) technology for generating safe and efficient adipose-tissue-engineered constructs with enhanced mitochondrial uncoupling protein 1 (UCP1) expression. We designed the CRISPRa system for the activation of UCP1 gene expression. CRISPRa-UCP1 was delivered into mature adipocytes by a baculovirus vector. Modified adipocytes were transplanted in C57BL/6 mice, followed by analysis of grafts, inflammation and systemic glucose metabolism. Staining of grafts on day 8 after transplantation shows them to contain UCP1-positive adipocytes. Following transplantation, adipocytes remain in grafts and exhibit expression of PGC1α transcription factor and hormone sensitive lipase (HSL). Transplantation of CRISPRa-UCP1-modified adipocytes does not influence glucose metabolism or inflammation in recipient mice. We show the utility and safety of baculovirus vectors for CRISPRa-based thermogenic gene activation. Our findings suggest a means of improving existing cell therapy approaches using baculovirus vectors and CRISPRa for modification and transplantation of non-immunogenic adipocytes.
Subject(s)
Adipose Tissue, Brown , Uncoupling Protein 1 , Animals , Humans , Mice , Adipocytes, Brown/metabolism , Adipose Tissue, Brown/transplantation , Clustered Regularly Interspaced Short Palindromic Repeats , Diabetes Mellitus, Type 2/therapy , Glucose/metabolism , Mice, Inbred C57BL , Thermogenesis/genetics , Uncoupling Protein 1/metabolismABSTRACT
Background: There are limited reports on the treatment of complex calcified lesions using rotational atherectomy (RA) in octogenarians, particularly in high-risk patients. Objective: To evaluate procedural and clinical outcomes of RA in octogenarians. Methods: Consecutive RA patients from 2010 to 2018 were selected from our catheterization laboratory database, stratified into two groups (≥ or < 80 years old), and analyzed. Results: A total of 411 patients (269 males and 142 females) with a mean age of 73.8 ± 11.3 years were enrolled, of whom 153 were ≥ 80 years old and 258 were < 80 years old. Most of the patients displayed high-risk features. The baseline Syntax scores were high in both groups, and most lesions were heavily calcified (96.1% vs. 97.3%, p = 0.969, respectively). The use of hemodynamic support intra-aortic balloon pump was more frequent in the octogenarians (21.6% vs. 11.6%, p = 0.007), but the RA completion rate was similarly high (95.9% vs. 99.1%, p = 0.842). There was no difference in acute complications. The total/cardiovascular (CV) death rate within one year was higher in the octogenarians, along with higher major adverse cardiovascular event (MACE)/CV MACE rates in the first month. Cox regression analysis showed that age ≥ 80 years, acute coronary syndrome, ischemic cardiomyopathy/shock, multi-vessel disease and serum creatinine were all predictors of MACE, and that these factors plus peripheral artery disease were predictors of all-cause mortality in these patients. Conclusions: RA is feasible with a very high success rate in high-risk octogenarians with complex anatomies, and with equal safety and no increase in complications. The higher rates of all-cause death and MACE were attributed to an older age and other traditional risk factors.
ABSTRACT
Future wireless networks promise immense increases on data rate and energy efficiency while overcoming the difficulties of charging the wireless stations or devices in the Internet of Things (IoT) with the capability of simultaneous wireless information and power transfer (SWIPT). For such networks, jointly optimizing beamforming, power control, and energy harvesting to enhance the communication performance from the base stations (BSs) (or access points (APs)) to the mobile nodes (MNs) served would be a real challenge. In this work, we formulate the joint optimization as a mixed integer nonlinear programming (MINLP) problem, which can be also realized as a complex multiple resource allocation (MRA) optimization problem subject to different allocation constraints. By means of deep reinforcement learning to estimate future rewards of actions based on the reported information from the users served by the networks, we introduce single-layer MRA algorithms based on deep Q-learning (DQN) and deep deterministic policy gradient (DDPG), respectively, as the basis for the downlink wireless transmissions. Moreover, by incorporating the capability of data-driven DQN technique and the strength of noncooperative game theory model, we propose a two-layer iterative approach to resolve the NP-hard MRA problem, which can further improve the communication performance in terms of data rate, energy harvesting, and power consumption. For the two-layer approach, we also introduce a pricing strategy for BSs or APs to determine their power costs on the basis of social utility maximization to control the transmit power. Finally, with the simulated environment based on realistic wireless networks, our numerical results show that the two-layer MRA algorithm proposed can achieve up to 2.3 times higher value than the single-layer counterparts which represent the data-driven deep reinforcement learning-based algorithms extended to resolve the problem, in terms of the utilities designed to reflect the trade-off among the performance metrics considered.
ABSTRACT
In a network architecture, an intrusion detection system (IDS) is one of the most commonly used approaches to secure the integrity and availability of critical assets in protected systems. Many existing network intrusion detection systems (NIDS) utilize stand-alone classifier models to classify network traffic as an attack or as normal. Due to the vast data volume, these stand-alone models struggle to reach higher intrusion detection rates with low false alarm rates( FAR). Additionally, irrelevant features in datasets can also increase the running time required to develop a model. However, data can be reduced effectively to an optimal feature set without information loss by employing a dimensionality reduction method, which a classification model then uses for accurate predictions of the various network intrusions. In this study, we propose a novel feature-driven intrusion detection system, namely χ2-BidLSTM, that integrates a χ2 statistical model and bidirectional long short-term memory (BidLSTM). The NSL-KDD dataset is used to train and evaluate the proposed approach. In the first phase, the χ2-BidLSTM system uses a χ2 model to rank all the features, then searches an optimal subset using a forward best search algorithm. In next phase, the optimal set is fed to the BidLSTM model for classification purposes. The experimental results indicate that our proposed χ2-BidLSTM approach achieves a detection accuracy of 95.62% and an F-score of 95.65%, with a low FAR of 2.11% on NSL-KDDTest+. Furthermore, our model obtains an accuracy of 89.55%, an F-score of 89.77%, and an FAR of 2.71% on NSL-KDDTest-21, indicating the superiority of the proposed approach over the standard LSTM method and other existing feature-selection-based NIDS methods.
Subject(s)
Algorithms , Models, StatisticalABSTRACT
Chikungunya virus (CHIKV) has repeatedly spread via the bite of an infected mosquito and affected more than 100 countries. The disease poses threats to public health and the economy in the infected locations. Many efforts have been devoted to identifying compounds that could inhibit CHIKV. Unfortunately, successful clinical candidates have not been found yet. Computations through the simulating recognition process were performed on complexation of the nsP3 protein of CHIKV with the structures of triply conjugated drug lead candidates. The outcomes provided the aid on rational design of functionalized quinazoline-(α-substituted coumarin)-arylsulfonate compounds to inhibit CHIKV in Vero cells. The molecular docking studies showed a void space around the ß carbon atom of coumarin when a substituent was attached at the α position. The formed vacancy offered a good chance for a Michael addition to take place owing to steric and electronic effects. The best conjugate containing a quinazolinone moiety exhibited potency with EC50 = 6.46 µM, low toxicity with CC50 = 59.7 µM, and the selective index (SI) = 9.24. Furthermore, the corresponding 4-anilinoquinazoline derivative improved the anti-CHIKV potency to EC50 = 3.84 µM, CC50 = 72.3 µM, and SI = 18.8. The conjugate with 4-anilinoquinazoline exhibited stronger binding affinity towards the macro domain than that with quinazolinone via hydrophobic and hydrogen bond interactions.
Subject(s)
Chikungunya virus , Animals , Antiviral Agents/chemistry , Arylsulfonates/metabolism , Arylsulfonates/pharmacology , Chlorocebus aethiops , Computer-Aided Design , Coumarins/pharmacology , Molecular Docking Simulation , Quinazolines/metabolism , Quinazolines/pharmacology , Quinazolinones/pharmacology , Vero Cells , Virus ReplicationABSTRACT
BACKGROUND AND PURPOSE: Cerebral autosomal dominant arteriopathy with subcortical infarcts and leukoencephalopathy (CADASIL) is a monogenic cerebral small vessel disease. The role of intracerebral hemorrhage (ICH) in CADASIL remains elusive. The present study aims to investigate the prevalence, characteristics, and risk factors for ICH in CADASIL. METHODS: This retrospective cross-sectional study investigated ICH and cerebral microbleeds (CMBs) in brain susceptibility-weighted imaging or T2*-weighted gradient-recalled echo images of 127 Taiwanese patients with genetically confirmed CADASIL. We analyzed CMBs, lacunes, white matter hyperintensity, and perivascular space. The total small vessel disease score (range, 0-4) was calculated to estimate the overall magnetic resonance imaging burden of small vessel disease. Multivariate regression analysis was performed to identify factors related to ICH lesions in CADASIL. RESULTS: Thirty-seven ICH lesions, including 15 symptomatic and 22 asymptomatic lesions, were found in 27 (21.3% [95% CI, 14.0%-30.9%]) of the 127 patients with CADASIL. The thalamus and lobar regions were the most common ICH locations, and 72.7% of the lobar hemorrhages occurred silently. Patients with CADASIL with ICH lesions more often had hypertension and a higher total small vessel disease score than those without ICH (odds ratio [95% CI]: 3.22 [1.25-8.30] and 3.79 [1.51-9.51]). The presence of CMBs in the brain stem and a total CMB count >10 were independently associated with ICH lesions in patients with CADASIL, with odds ratio (95% CI) of 5.82 (1.80-18.80) and 3.83 (1.08-13.67), respectively. CONCLUSIONS: ICH is an underestimated but important manifestation of CADASIL. The location and number of CMBs are associated with the presence of ICH lesions in patients with CADASIL.
Subject(s)
Cerebral Hemorrhage/epidemiology , Cerebral Infarction/epidemiology , Leukoencephalopathies/epidemiology , Neuroimaging/methods , Aged , Arteries/pathology , Brain/pathology , CADASIL , Cerebral Hemorrhage/complications , Cerebral Infarction/complications , Cerebrovascular Circulation , Cross-Sectional Studies , Female , Humans , Leukoencephalopathies/complications , Magnetic Resonance Imaging/adverse effects , Male , Middle Aged , Mutation , Prevalence , Retrospective Studies , Risk FactorsABSTRACT
CRISPR activation (CRISPRa) is a burgeoning technology for programmable gene activation, but its potential for tissue regeneration has yet to be fully explored. Bone marrow-derived mesenchymal stem cells (BMSCs) can differentiate into osteogenic or adipogenic pathways, which are governed by the Wnt (Wingless-related integration site) signaling cascade. To promote BMSC differentiation toward osteogenesis and improve calvarial bone healing by BMSCs, we harnessed a highly efficient hybrid baculovirus vector for gene delivery and exploited a synergistic activation mediator (SAM)-based CRISPRa system to activate Wnt10b (that triggers the canonical Wnt pathway) and forkhead c2 (Foxc2) (that elicits the noncanonical Wnt pathway) in BMSCs. We constructed a Bac-CRISPRa vector to deliver the SAM-based CRISPRa system into rat BMSCs. We showed that Bac-CRISPRa enabled CRISPRa delivery and potently activated endogenous Wnt10b and Foxc2 expression in BMSCs for >14 days. Activation of Wnt10b or Foxc2 alone was sufficient to promote osteogenesis and repress adipogenesis in vitro. Furthermore, the robust and prolonged coactivation of both Wnt10b and Foxc2 additively enhanced osteogenic differentiation while inhibiting adipogenic differentiation of BMSCs. The CRISPRa-engineered BMSCs with activated Wnt10b and Foxc2 remarkably improved the calvarial bone healing after implantation into the critical-sized calvarial defects in rats. These data implicate the potentials of CRISPRa technology for bone tissue regeneration.
Subject(s)
Bone Regeneration/genetics , Forkhead Transcription Factors/genetics , Mesenchymal Stem Cells/metabolism , Osteogenesis/genetics , Transcriptional Activation , Wnt Proteins/genetics , Adipogenesis , Animals , Calcification, Physiologic , Calcium/metabolism , Cell Differentiation/genetics , Cells, Cultured , Rats , Skull/diagnostic imaging , Skull/metabolism , Wnt Signaling Pathway , X-Ray MicrotomographyABSTRACT
Calvarial bone healing remains difficult but may be improved by stimulating chondrogenesis of implanted stem cells. To simultaneously promote chondrogenesis and repress adipogenesis of stem cells, we built a CRISPRai system that comprised inactive Cas9 (dCas9), two fusion proteins as activation/repression complexes and two single guide RNA (sgRNA) as scaffolds for recruiting activator (sgRNAa) or inhibitor (sgRNAi). By plasmid transfection and co-expression in CHO cells, we validated that dCas9 coordinated with sgRNAa to recruit the activator for mCherry activation and also orchestrated with sgRNAi to recruit the repressor for d2EGFP inhibition, without cross interference. After changing the sgRNA sequence to target endogenous Sox9/PPAR-γ, we packaged the entire CRISPRai system into an all-in-one baculovirus for efficient delivery into rat bone marrow-derived mesenchymal stem cells (rBMSC) and verified simultaneous Sox9 activation and PPAR-γ repression. The activation/inhibition effects were further enhanced/prolonged by using the Cre/loxP-based hybrid baculovirus. The CRISPRai system delivered by the hybrid baculovirus stimulated chondrogenesis and repressed adipogenesis of rBMSC in 2D culture and promoted the formation of engineered cartilage in 3D culture. Importantly, implantation of the rBMSC engineered by the CRISPRai improved calvarial bone healing. This study paves a new avenue to translate the CRISPRai technology to regenerative medicine.
Subject(s)
Adult Stem Cells/transplantation , Bone Regeneration/genetics , CRISPR-Cas Systems , Chondrogenesis/genetics , Gene Editing/methods , Mesenchymal Stem Cell Transplantation , Parietal Bone/physiology , Tissue Scaffolds , Transcriptional Activation , Wound Healing/genetics , Adipogenesis , Animals , Baculoviridae , Bone Marrow Transplantation , CHO Cells , CRISPR-Associated Protein 9 , Cricetulus , Luminescent Proteins , PPAR gamma/genetics , Parietal Bone/injuries , RNA, Guide, Kinetoplastida , Rats, Sprague-Dawley , Recombinant Fusion Proteins , SOX9 Transcription Factor/genetics , Red Fluorescent ProteinABSTRACT
CRISPR/Cas9 is a powerful genome editing system but uncontrolled Cas9 nuclease expression triggers off-target effects and even in vivo immune responses. Inspired by synthetic biology, here we built a synthetic switch that self-regulates Cas9 expression not only in the transcription step by guide RNA-aided self-cleavage of cas9 gene, but also in the translation step by L7Ae:K-turn repression system. We showed that the synthetic switch enabled simultaneous transcriptional and translational repression, hence stringently attenuating the Cas9 expression. The restricted Cas9 expression induced high efficiency on-target indel mutation while minimizing the off-target effects. Furthermore, we unveiled the correlation between Cas9 expression kinetics and on-target/off-target mutagenesis. The synthetic switch conferred detectable Cas9 expression and concomitant high frequency on-target mutagenesis at as early as 6 h, and restricted the Cas9 expression and off-target effects to minimal levels through 72 h. The synthetic switch is compact enough to be incorporated into viral vectors for self-regulation of Cas9 expression, thereby providing a novel 'hit and run' strategy for in vivo genome editing.
Subject(s)
CRISPR-Associated Protein 9/genetics , CRISPR-Cas Systems , Gene Expression Regulation , CRISPR-Associated Protein 9/biosynthesis , Cell Line , Gene Editing , Humans , Kinetics , Mutagenesis , Mutation , Protein Biosynthesis , Transcription, GeneticABSTRACT
Osteoarthritis (OA) is a common chronic disease with increasing prevalence in societies with more aging populations, therefore, it is causing more concern. S-Equol, a kind of isoflavones, was reported to be bioavailable and beneficial to humans in many aspects, such as improving menopausal symptoms, osteoporosis and prevention of cardiovascular disease. This study investigated the effects of S-Equol on OA progress in which rat primary chondrocytes were treated with sodium nitroprusside (SNP) to mimic OA progress with or without the co-addition of S-Equol for the evaluation of S-Equol's efficacy on OA. Results showed treatment of 0.8 mM SNP caused cell death, and increased oxidative stress (NO and H2O2), apoptosis, and proteoglycan loss. Furthermore, the expressions of MMPs of MMP-2, MMP-3, MMP-9, and MMP-13 and p53 were increased. The addition of 30 µM S-Equol could lessen those caused by SNP. Moreover, S-Equol activates the PI3K/Akt pathway, which is an upstream regulation of p53 and NO production and is associated with apoptosis and matrix degradation. As a pretreatment of phosphoinositide 3-kinases (PI3K) inhibitor, all S-Equol protective functions against SNP decrease or disappear. In conclusion, through PI3K/Akt activation, S-Equol can protect chondrocytes against SNP-induced matrix degradation and apoptosis, which are commonly found in OA, suggesting S-Equol is a potential for OA prevention.
Subject(s)
Chondrocytes/cytology , Equol/pharmacology , Nitroprusside/adverse effects , Osteoarthritis/metabolism , Signal Transduction/drug effects , Animals , Cell Survival/drug effects , Cells, Cultured , Chondrocytes/drug effects , Female , Gene Expression Regulation , Humans , Male , Models, Biological , Osteoarthritis/chemically induced , Osteoarthritis/drug therapy , Oxidative Stress/drug effects , Phosphatidylinositol 3-Kinases/metabolism , Primary Cell Culture , Proto-Oncogene Proteins c-akt/metabolism , RatsABSTRACT
Osteoarthritis (OA) is characterized with articular cartilage degradation, and monosodium iodoacetate (MIA)-treated chondrocyte is the most commonly used model for mimicking OA progression. Zinc protects chondrocytes from MIA-induced damage. Here, we explored the protective effects of 25⯵M zinc on 5⯵M MIA-treated SW1353â¯cells (human chondrosarcoma cell line) through the analysis of energy metabolism- and autophagy-related parameters. We found that the exposure of SW1353â¯cells to MIA decreased ATP levels, expression of glycolysis-related proteins, including glucose transporter 1, hexokinase 2, and pyruvate dehydrogenase E1 component subunit alpha, and the levels of mitochondrial complex I, II, IV, and V subunits of the oxidative phosphorylation pathway. MIA treatment also decreased the expression of autophagy-related proteins, including autophagic elongation protein 5 (ATG5), ATG7, and microtubule-associated protein 1A/1B light chain 3B (LC3-II) and mitophagy-related proteins, including phosphatase and tensin homolog (PTEN)-induced putative kinase 1 (PINK1), ubiquitin, and p62. These results indicate that MIA interferes with energy metabolism and the autophagic clearance of dysfunctional mitochondria (so called mitophagy). Interestingly, zinc exposure could almost completely reverse the effects of MIA, suggesting its potential protective role against OA progression.
Subject(s)
Adenosine Triphosphate/metabolism , Chondrocytes/drug effects , Iodoacetic Acid/antagonists & inhibitors , Mitochondria/drug effects , Mitophagy/drug effects , Protective Agents/pharmacology , Zinc Sulfate/pharmacology , Cell Survival/drug effects , Dose-Response Relationship, Drug , Humans , Iodoacetic Acid/pharmacology , Mitochondria/metabolism , Tumor Cells, CulturedABSTRACT
A three-component annulation reaction was developed for the synthesis of pyrroles, a class of compounds with various properties valuable to biomedical and polymer industries. Treatment of α-silylaryl triflates, Schiff bases, and alkynes generated polysubstituted pyrroles in good yields (61-86%) with regioselectivity. This domino reaction involved completion of five sequential steps in a single flask, which comprised aryne formation through 1,2-elimination, their alkylation by Schiff bases through 1,2-addition, 1,4-intramolecular proton transfer, Hüisgen 1,3-dipolar cycloaddition, and dehydrogenative aromatization. It was then successfully applied as the key step in the synthesis of the natural product lamellarin R. This new reaction represents an efficient, sustainable process for the production of chemical materials.
Subject(s)
Heterocyclic Compounds, 4 or More Rings , Pyrroles , Catalysis , Molecular StructureABSTRACT
Multi-walled carbon-nanotube (MWCNT)-decorated WTe2 nanostars (WTe2@CNT nanocomposites) are to be employed for the first time as anode candidates in the development of lithium-ion (Li-ion) batteries. WTe2@CNT nanocomposites deliver a high discharge capacity of 1097, 475, 439, 408, 395 and 381 mA h g-1 with an increasing current density of 100, 200, 400, 600, 800 and 1000 mA g-1, respectively, while WTe2 nanostars exhibit a reversible capacity of 655, 402, 400, 362, 290 and 197 mA h g-1 with the aforementioned current densities. Furthermore, WTe2@CNT nanocomposites exhibit a superior reversible capacity of 592 mA h g-1 at 500 mA g-1 with a capacity retention of 100% achieved over 500 cycles, while bare WTe2 nanostars deliver â¼85 mA h g-1 over 350 cycles. This remarkable Li cycling performance is attributed to MWCNTs interconnected with WTe2 nanostars. In addition, the exposed active interlayers of the WTe2 nanostars, which are responsible for maintaining the structural integrity of the electrodes, buffer the large volume expansion within the WTe2 nanostars, avoiding the agglomeration of the particles. The layered WTe2 nanostars were synthesized via the solution-phase method, and present extremely good possibilities for the scaling-up of Li-ion battery storage systems.