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1.
J Med Virol ; 96(3): e29504, 2024 Mar.
Article in English | MEDLINE | ID: mdl-38445794

ABSTRACT

While most NOD-like receptors (NLRs) are predominately expressed by innate immune cells, NLRC3, an inhibitory NLR of immune signaling, exhibits the highest expression in lymphocytes. The role of NLRC3 or any NLRs in B lymphocytes is completely unknown. Gammaherpesviruses, including human Epstein-Barr virus (EBV) and murine gammaherpesvirus 68 (MHV-68), establish latent infection in B lymphocytes, which requires elevated NF-κB. This study shows that during latent EBV infection of human B cells, viral-encoded latent membrane protein 1 (LMP1) decreases NLRC3 transcript. LMP1-induced-NF-κB activation suppresses the promoter activity of NLRC3 via p65 binding to the promoter. Conversely, NLRC3 inhibits NF-κB activation by promoting the degradation of LMP1 in a proteasome-dependent manner. In vivo, MHV-68 infection reduces Nlrc3 transcripts in splenocytes, and Nlrc3-deficient mice show greater viral latency than controls. These results reveal a bidirectional regulatory circuit in B lymphocytes, where viral latent protein LMP1 reduces NLRC3 expression, while NLRC3 disrupts gammaherpesvirus latency, which is an important step for tumorigenesis.


Subject(s)
Epstein-Barr Virus Infections , Virus Latency , Animals , Humans , Mice , Herpesvirus 4, Human/genetics , NF-kappa B , B-Lymphocytes , Intercellular Signaling Peptides and Proteins
2.
Hum Mol Genet ; 29(2): 286-294, 2020 01 15.
Article in English | MEDLINE | ID: mdl-31816064

ABSTRACT

Glycogen storage disease type Ia (GSD Ia) is caused by autosomal mutations in glucose-6-phosphatase α catalytic subunit (G6PC) and can present with severe hypoglycemia, lactic acidosis and hypertriglyceridemia. In both children and adults with GSD Ia, there is over-accumulation of hepatic glycogen and triglycerides that can lead to steatohepatitis and a risk for hepatocellular adenoma or carcinoma. Here, we examined the effects of the commonly used peroxisomal proliferated activated receptor α agonist, fenofibrate, on liver and kidney autophagy and lipid metabolism in 5-day-old G6pc -/- mice serving as a model of neonatal GSD Ia. Five-day administration of fenofibrate decreased the elevated hepatic and renal triglyceride and hepatic glycogen levels found in control G6pc -/- mice. Fenofibrate also induced autophagy and promoted ß-oxidation of fatty acids and stimulated gene expression of acyl-CoA dehydrogenases in the liver. These findings show that fenofibrate can rapidly decrease hepatic glycogen and triglyceride levels and renal triglyceride levels in neonatal G6pc -/- mice. Moreover, since fenofibrate is an FDA-approved drug that has an excellent safety profile, our findings suggest that fenofibrate could be a potential pharmacological therapy for GSD Ia in neonatal and pediatric patients as well as for adults. These findings may also apply to non-alcoholic fatty liver disease, which shares similar pathological and metabolic changes with GSD Ia.


Subject(s)
Fenofibrate/pharmacology , Glucose-6-Phosphatase/metabolism , Glycogen Storage Disease Type I/metabolism , Glycogen/metabolism , Lipid Metabolism/drug effects , Liver/drug effects , Acyl-CoA Dehydrogenases/metabolism , Animals , Animals, Newborn , Autophagosomes/drug effects , Autophagosomes/pathology , Autophagosomes/ultrastructure , Autophagy/drug effects , Fatty Acids/metabolism , Fenofibrate/administration & dosage , Glucose-6-Phosphatase/genetics , Glycogen Storage Disease Type I/enzymology , Glycogen Storage Disease Type I/genetics , Kidney/drug effects , Kidney/metabolism , Kidney/pathology , Liver/enzymology , Liver/pathology , Liver/ultrastructure , Mice , Mice, Knockout , Microscopy, Electron, Transmission , PPAR alpha/genetics , PPAR alpha/metabolism , Triglycerides/metabolism
3.
J Physiol ; 599(8): 2273-2281, 2021 04.
Article in English | MEDLINE | ID: mdl-33675053

ABSTRACT

KEY POINTS: Axon collaterals of DG granule neurons project towards neighbouring DG granule cell layer Longitudinal axons in the DG-DG circuit possess denser synapses than transverse axons in the DG-CA3 circuit The size of varicosities of the longitudinal axons, but not transverse ones, is regulated by seizures as measured behaviourally Varicosity size of DG-DG axons can be a symptomatic marker of DG-related brain diseases ABSTRACT: The hippocampus network has captured the attention of neuroscientists as a model for understanding cognition and behaviour. Previously, we have identified interlamellar, namely longitudinal, axons between CA1 pyramidal neurons analogous to recurrent connections between CA3 pyramidal neurons. Currently it is unknown whether longitudinal axons of DG granule neurons are present and how they are associated with the behavioural symptoms of seizure. We found longitudinal axons projections from DG granule cells extending to neighbouring DG granule cell layers. These DG-DG axons have more numerous varicosities and are thinner than the DG-CA3 axons, suggesting heavy synaptic formation along a longitudinal axis. Furthermore, the size of varicosities in the DG-DG but not DG-CA3 axons is regulated by seizures as measured behaviourally. The results suggest that the dynamics of longitudinal DG axons is a symptomatic marker of DG-related brain diseases.


Subject(s)
Axons , Hippocampus , Dentate Gyrus , Humans , Seizures , Synapses
4.
Nucleic Acids Res ; 46(17): 9011-9026, 2018 09 28.
Article in English | MEDLINE | ID: mdl-30137501

ABSTRACT

DExD/H-box helicase 9 (DHX9), or RNA helicase A (RHA), is an abundant multifunctional nuclear protein. Although it was previously reported to act as a cytosolic DNA sensor in plasmacytoid dendritic cells (pDCs), the role and molecular mechanisms of action of DHX9 in cells that are not pDCs during DNA virus infection are not clear. Here, a macrophage-specific knockout and a fibroblast-specific knockdown of DHX9 impaired antiviral innate immunity against DNA viruses, leading to increased virus replication. DHX9 enhanced NF-κB-mediated transactivation in the nucleus, which required its ATPase-dependent helicase (ATPase/helicase) domain, but not the cytosolic DNA-sensing domain. In addition, DNA virus infection did not induce cytoplasmic translocation of nuclear DHX9 in macrophages and fibroblasts. Nuclear DHX9 was associated with a multiprotein complex including both NF-κB p65 and RNA polymerase II (RNAPII) in chromatin containing NF-κB-binding sites. DHX9 was essential for the recruitment of RNAPII rather than NF-κB p65, to the corresponding promoters; this function also required its ATPase/helicase activity. Taken together, our results show a critical role of nuclear DHX9 (as a transcription coactivator) in the stimulation of NF-κB-mediated innate immunity against DNA virus infection, independently of DHX9's DNA-sensing function.


Subject(s)
DEAD-box RNA Helicases/genetics , DNA, Viral/genetics , Host-Pathogen Interactions/genetics , Immunity, Innate , NF-kappa B/genetics , RNA Polymerase II/genetics , Animals , Chlorocebus aethiops , DEAD-box RNA Helicases/deficiency , DEAD-box RNA Helicases/immunology , DNA, Viral/immunology , Dendritic Cells/immunology , Dendritic Cells/virology , Female , Gammaherpesvirinae/genetics , Gammaherpesvirinae/growth & development , Gammaherpesvirinae/immunology , Gene Expression Regulation , HEK293 Cells , HeLa Cells , Herpesvirus 1, Human/genetics , Herpesvirus 1, Human/growth & development , Herpesvirus 1, Human/immunology , Host-Pathogen Interactions/immunology , Humans , Macrophages/immunology , Macrophages/virology , Male , Mice , Mice, Transgenic , Mouse Embryonic Stem Cells/immunology , Mouse Embryonic Stem Cells/virology , NF-kappa B/immunology , NIH 3T3 Cells , Primary Cell Culture , RNA Polymerase II/immunology , Signal Transduction , Vero Cells , Virus Replication
5.
Biochem Biophys Res Commun ; 509(2): 414-420, 2019 02 05.
Article in English | MEDLINE | ID: mdl-30594400

ABSTRACT

BST2 is an antiviral factor that inhibits the release of enveloped virus at the plasma membrane via an unusual topology in which its N-terminal is in the cytosol while its C-terminal is anchored by glycophosphatidylinositol (GPI). BST2-deficient cells showed substantially higher release of virions than wild type cells. Influenza-infected BST2-deficient cells showed greatly reduced cytopathic effect (CPE) than wild type cells despite their generally robust virus production. This finding prompted us to determine whether BST2 was involved in the apoptotic process of virus-infected host cells. Our results revealed that BST2 might be involved in IRE1α-mediated ER stress pathway by increasing spliced form XBP-1. Consequently, levels of cytochrome C, caspase-3, caspase-9, and PARP as representative molecules of apoptosis were significantly increased in wild type cells than those in BST2-deficient cells. These results suggest that BST2 might participate in innate host defense by augmenting ER-stress-induced apoptotic signaling to inhibit the replication and spread of virus.


Subject(s)
Antigens, CD/genetics , Endoribonucleases/genetics , Host-Pathogen Interactions/genetics , Influenza A Virus, H1N1 Subtype/genetics , Protein Serine-Threonine Kinases/genetics , X-Box Binding Protein 1/genetics , Animals , Antigens, CD/immunology , Apoptosis/genetics , Apoptosis/immunology , Caspase 3/genetics , Caspase 3/immunology , Caspase 9/genetics , Caspase 9/immunology , Chlorocebus aethiops , Cytochromes c/genetics , Cytochromes c/immunology , Dogs , Endoplasmic Reticulum/genetics , Endoplasmic Reticulum/immunology , Endoplasmic Reticulum Stress/genetics , Endoplasmic Reticulum Stress/immunology , Endoribonucleases/immunology , GPI-Linked Proteins/genetics , GPI-Linked Proteins/immunology , Gene Expression Regulation , HEK293 Cells , Host-Pathogen Interactions/immunology , Humans , Immunity, Innate , Influenza A Virus, H1N1 Subtype/immunology , Madin Darby Canine Kidney Cells , Poly(ADP-ribose) Polymerases/genetics , Poly(ADP-ribose) Polymerases/immunology , Protein Serine-Threonine Kinases/immunology , Signal Transduction , Vero Cells , Virus Replication , X-Box Binding Protein 1/immunology
6.
Nucleic Acids Res ; 44(19): 9483-9493, 2016 Nov 02.
Article in English | MEDLINE | ID: mdl-27596595

ABSTRACT

GTP and branched-chain amino acids (BCAAs) are metabolic sensors that are indispensable for the determination of the metabolic status of cells. However, their molecular sensing mechanism remains unclear. CodY is a unique global transcription regulator that recognizes GTP and BCAAs as specific signals and affects expression of more than 100 genes associated with metabolism. Herein, we report the first crystal structures of the full-length CodY complex with sensing molecules and describe their functional states. We observed two different oligomeric states of CodY: a dimeric complex of CodY from Staphylococcus aureus with the two metabolites GTP and isoleucine, and a tetrameric form (apo) of CodY from Bacillus cereus Notably, the tetrameric state shows in an auto-inhibitory manner by blocking the GTP-binding site, whereas the binding sites of GTP and isoleucine are clearly visible in the dimeric state. The GTP is located at a hinge site between the long helical region and the metabolite-binding site. Together, data from structural and electrophoretic mobility shift assay analyses improve understanding of how CodY senses GTP and operates as a DNA-binding protein and a pleiotropic transcription regulator.


Subject(s)
Bacterial Proteins/chemistry , Guanosine Triphosphate/chemistry , Models, Molecular , Repressor Proteins/chemistry , Transcription Factors/chemistry , Amino Acid Sequence , Bacterial Proteins/metabolism , Binding Sites , DNA/chemistry , DNA/metabolism , Guanosine Triphosphate/metabolism , Protein Conformation , Protein Interaction Domains and Motifs , Repressor Proteins/metabolism , Structure-Activity Relationship , Transcription Factors/metabolism
7.
J Appl Clin Med Phys ; 19(6): 193-199, 2018 Nov.
Article in English | MEDLINE | ID: mdl-30354001

ABSTRACT

PURPOSE: The delivery quality assurance (DQA) of intensity-modulated radiotherapy (IMRT) plans is a prerequisite for ensuring patient treatments. This work investigated the clinical usefulness of a new DQA system, Dosimetry Check™(DC), on TomoTherapy® -based helical IMRT plans. METHODS: The DQA was performed for 15 different TomoTherapy® -based clinical treatment plans. In Tomotherapy® machines, the couch position was set to a height of 400 mm and the treatment plans were delivered using QA-Treatment mode. For each treatment plan, the plan data and measured beam fluence were transferred to a DC-installed computer. Then, DC reconstructed the three-dimensional (3D) dose distribution to the CT images of the patient. The reconstructed dose distribution was compared with that of the original plan in terms of absolute dose, two-dimensional (2D) planes and 3D volume. The DQA results were compared with those performed by a conventional method using the cheese phantom with ion chamber and radiochromic film. RESULTS: For 14 out of the 15 treatment plans, the absolute dose difference between the measurement and calculation was less than 3% and the gamma pass rate with the 3%/3 mm gamma evaluation criteria was greater than 95% for both DQA methods. The P-value calculated using Wilcoxon signed-rank test was 0.256, which implies no statistically significance in determining the absolute dose difference between the two methods. For one treatment plan generated using the 5.0 cm field width, the absolute dose difference was greater than 3% and the gamma pass rate was less than 95% with DC, while the DQA result with the cheese phantom method passed our TomoTherapy® DQA tolerance. CONCLUSION: We have clinically implemented DC for the DQA of TomoTherapy® -based helical IMRT treatment plans. DC carried out the accurate DQA results as performed with the conventional cheese phantom method. This new DQA system provided more information in verifying the dose delivery to patients, while simplifying the DQA process.


Subject(s)
Abdominal Neoplasms/radiotherapy , Head and Neck Neoplasms/radiotherapy , Phantoms, Imaging , Quality Assurance, Health Care/standards , Radiotherapy Planning, Computer-Assisted/methods , Radiotherapy, Intensity-Modulated/methods , Algorithms , Humans , Organs at Risk/radiation effects , Prognosis , Radiometry/methods , Radiotherapy Dosage
8.
J Virol ; 89(18): 9676-82, 2015 09.
Article in English | MEDLINE | ID: mdl-26157130

ABSTRACT

UNLABELLED: In Kaposi's sarcoma-associated herpesvirus (KSHV), poly(ADP-ribose) polymerase 1 (PARP-1) acts as an inhibitor of lytic replication. Here, we demonstrate that KSHV downregulated PARP-1 upon reactivation. The viral processivity factor of KSHV (PF-8) interacted with PARP-1 and was sufficient to degrade PARP-1 in a proteasome-dependent manner; this effect was conserved in murine gammaherpesvirus 68. PF-8 knockdown in KSHV-infected cells resulted in reduced lytic replication upon reactivation with increased levels of PARP-1, compared to those in control cells. PF-8 overexpression reduced the levels of the poly(ADP-ribosyl)ated (PARylated) replication and transcription activator (RTA) and further enhanced RTA-mediated transactivation. These results suggest a novel viral mechanism for overcoming the inhibitory effect of a host factor, PARP-1, thereby promoting the lytic replication of gammaherpesvirus. IMPORTANCE: Gammaherpesviruses are important human pathogens, as they are associated with various kinds of tumors and establish latency mainly in host B lymphocytes. Replication and transcription activator (RTA) of Kaposi's sarcoma-associated herpesvirus (KSHV) is a central molecular switch for lytic replication, and its expression is tightly regulated by many host and viral factors. In this study, we investigated a viral strategy to overcome the inhibitory effect of poly(ADP-ribose) polymerase 1 (PARP-1) on RTA's activity. PARP-1, an abundant multifunctional nuclear protein, was downregulated during KSHV reactivation. The viral processivity factor of KSHV (PF-8) directly interacted with PARP-1 and was sufficient and necessary to degrade PARP-1 protein in a proteasome-dependent manner. PF-8 reduced the levels of PARylated RTA and further promoted RTA-mediated transactivation. As this was also conserved in another gammaherpesvirus, murine gammaherpesvirus 68, our results suggest a conserved viral modulation of a host inhibitory factor to facilitate its lytic replication.


Subject(s)
Down-Regulation , Gene Expression Regulation, Enzymologic , Herpesvirus 8, Human/physiology , Poly(ADP-ribose) Polymerases/biosynthesis , Viral Proteins/metabolism , Virus Replication/physiology , Animals , Cricetinae , HEK293 Cells , Humans , Mice , Poly (ADP-Ribose) Polymerase-1 , Poly(ADP-ribose) Polymerases/genetics , Proteasome Endopeptidase Complex/genetics , Proteasome Endopeptidase Complex/metabolism , Proteolysis , Rhadinovirus/physiology , Viral Proteins/genetics
9.
Immunology ; 144(2): 312-20, 2015 Feb.
Article in English | MEDLINE | ID: mdl-25158146

ABSTRACT

Retinoic acid-inducible gene I (RIG-I) is a cytosolic pattern-recognition receptor that recognizes viruses and triggers anti-viral immune responses. Activation of intracellular RIG-I signalling is mediated through interferon-ß (IFN-ß) promoter stimulator-1 (IPS-1), an adaptor of RIG-I, which induces IFN regulatory factor (IRF) 3 activation and type I IFN expression. The phosphatidylinositol-3-kinase (PI3K) and Akt pathway is activated in host immune cells upon viral infection. However, the mechanism as to how they work in RIG-I signalling has not been fully elucidated. Therefore, we investigated the role of PI3K and Akt in the regulation of RIG-I-mediated IRF3 activation and type I IFN expression in macrophages. Our results show that Sendai virus infection, which is recognized by RIG-I, led to IRF3 activation and IFN-ß expression and these responses were attenuated by the PI3K inhibitor (LY294002) and an Akt dominant-negative mutant in the macrophage cell line(RAW264.7). IRF3 phosphorylation and dimerization as well as IFN-ß expression induced by a synthetic RIG-I agonist, short poly(I:C), were suppressed by LY294002 or siRNA-Akt in bone marrow-derived macrophages. Suppression of PI3K and Akt using a dominant-negative mutant and siRNA knockdown resulted in attenuation of IRF3 activation and IFN-ß expression induced by RIG-I itself or its adaptor, IPS-1. Association of Akt with IPS-1 increased with short poly(I:C) stimulation and required the pleckstrin homology domain of Akt and caspase-recruitment domain in IPS-1. Collectively, our results show that PI3K and Akt are required downstream of IPS-1 for RIG-I-mediated anti-viral immune responses. The results describe a novel, interactive relationship between RIG-I downstream signalling molecules resulting in efficient anti-viral immunity.


Subject(s)
Adaptor Proteins, Signal Transducing/immunology , DEAD-box RNA Helicases/immunology , Phosphatidylinositol 3-Kinase/immunology , Proto-Oncogene Proteins c-akt/immunology , Sendai virus/immunology , Animals , Antiviral Agents/pharmacology , Cells, Cultured , Chromones/pharmacology , DEAD Box Protein 58 , Dimerization , Enzyme Activation/immunology , Enzyme Inhibitors/pharmacology , HEK293 Cells , Humans , Interferon Inducers/pharmacology , Interferon Regulatory Factor-3/biosynthesis , Interferon Regulatory Factor-3/immunology , Interferon Regulatory Factor-3/metabolism , Interferon-beta/biosynthesis , Macrophages/immunology , Mice , Mice, Inbred C57BL , Morpholines/pharmacology , Phosphoinositide-3 Kinase Inhibitors , Phosphorylation , Poly I-C/pharmacology , Proto-Oncogene Proteins c-akt/genetics , RNA Interference , RNA, Small Interfering , Respirovirus Infections/immunology , Signal Transduction/immunology
10.
J Virol ; 88(12): 6832-46, 2014 Jun.
Article in English | MEDLINE | ID: mdl-24696485

ABSTRACT

UNLABELLED: Upon viral infection, type I interferons, such as alpha and beta interferon (IFN-α and IFN-ß, respectively), are rapidly induced and activate multiple antiviral genes, thereby serving as the first line of host defense. Many DNA and RNA viruses counteract the host interferon system by modulating the production of IFNs. In this study, we report that murine gammaherpesvirus 68 (MHV-68), a double-stranded DNA virus, encodes open reading frame 11 (ORF11), a novel immune modulator, to block IFN-ß production. ORF11-deficient recombinant viruses induced more IFN-ß production in fibroblast and macrophage cells than the MHV-68 wild type or a marker rescue virus. MHV-68 ORF11 decreased IFN-ß promoter activation by various factors, the signaling of which converges on TBK1-IRF3 activation. MHV-68 ORF11 directly interacted with both overexpressed and endogenous TBK1 but not with IRF3. Physical interactions between ORF11 and endogenous TBK1 were further confirmed during virus replication in fibroblasts using a recombinant virus expressing FLAG-ORF11. ORF11 efficiently reduced interaction between TBK1 and IRF3 and subsequently inhibited activation of IRF3, thereby negatively regulating IFN-ß production. Our domain-mapping study showed that the central domain of ORF11 was responsible for both TBK1 binding and inhibition of IFN-ß induction, while the kinase domain of TBK1 was sufficient for ORF11 binding. Taken together, these results suggest a mechanism underlying inhibition of IFN-ß production by a gammaherpesvirus and highlight the importance of TBK1 in DNA virus replication. IMPORTANCE: Gammaherpesviruses are important human pathogens, as they are associated with various kinds of tumors. Upon virus infection, the type I interferon pathway is activated by a series of signaling molecules and stimulates antiviral gene expression. To subvert such interferon antiviral responses, viruses are equipped with multiple factors that can inhibit its critical steps. In this study, we took an unbiased genomic approach using a mutant library of murine gammaherpesvirus 68 to screen a novel viral immune modulator that negatively regulates the type I interferon pathway and identified ORF11 as a strong candidate. ORF11-deficient virus infection produced more interferon than the wild type in both fibroblasts and macrophages. During virus replication, ORF11 directly bound to TBK1, a key regulatory protein in the interferon pathway, and inhibited TBK1-mediated interferon production. Our results highlight a crucial role of TBK1 in controlling DNA virus infection and a viral strategy to curtail host surveillance.


Subject(s)
Down-Regulation , Herpesviridae Infections/immunology , Interferon-beta/genetics , Protein Serine-Threonine Kinases/metabolism , Rhadinovirus/metabolism , Viral Proteins/metabolism , Animals , Herpesviridae Infections/enzymology , Herpesviridae Infections/virology , Host-Pathogen Interactions , Humans , Interferon-beta/immunology , Mice , Open Reading Frames , Promoter Regions, Genetic , Protein Binding , Protein Serine-Threonine Kinases/genetics , Rhadinovirus/genetics , Viral Proteins/genetics
12.
J Virol ; 86(2): 1109-18, 2012 Jan.
Article in English | MEDLINE | ID: mdl-22090108

ABSTRACT

Replication and transcription activator (RTA), an immediate-early gene, is a key molecular switch to evoke lytic replication of gammaherpesviruses. Open reading frame 49 (ORF49) is conserved among gammaherpesviruses and shown to cooperate with RTA in regulating virus lytic replication. Here we show a molecular mechanism and in vivo functions of murine gammaherpesvirus 68 (MHV-68 or γHV-68) ORF49. MHV-68 ORF49 was transcribed and translated as a late gene. The ORF49 protein was associated with a virion, interacting with the ORF64 large tegument protein and the ORF25 capsid protein. Moreover, ORF49 directly bound to RTA and its negative cellular regulator, poly(ADP-ribose) polymerase-1 (PARP-1), and disrupted the interactions of RTA and PARP-1. Productive replication of an ORF49-deficient mutant virus (49S) was attenuated in vivo as well as in vitro. Likewise, latent infection was also impaired in the spleen of 49S-infected mice. Taken together, our results suggest that the virion-associated ORF49 protein may promote virus replication both in vitro and in vivo by providing an optimal environment in the early phase of virus infection as a derepressor of RTA.


Subject(s)
Gammaherpesvirinae/physiology , Gene Expression Regulation, Viral , Herpesviridae Infections/veterinary , Immediate-Early Proteins/genetics , Trans-Activators/metabolism , Viral Proteins/metabolism , Virion/physiology , Virus Replication , Animals , Cell Line , Cricetinae , Gammaherpesvirinae/genetics , Herpesviridae Infections/virology , Humans , Immediate-Early Proteins/metabolism , Mice , Open Reading Frames , Rodent Diseases/virology , Trans-Activators/genetics , Transcription, Genetic , Viral Proteins/genetics , Virion/genetics
13.
Nanomaterials (Basel) ; 11(1)2021 Jan 08.
Article in English | MEDLINE | ID: mdl-33429956

ABSTRACT

Colloidal nanoparticles (NPs) have been recently spotlighted as building blocks for various nanostructured devices. Their collective properties have been exhibited by arranging them on a substrate to form assembled NPs. In particular, electrophoretic deposition (EPD) is an emerging fabrication method for such nanostructured films. To maximize the benefits of this method, further studies are required to fully elucidate the key parameters that influence the NP deposition. Herein, two key parameters are examined, namely: (i) the aging of colloidal NPs and (ii) the charge formation by surface ligands. The aging of Cu2-xS NPs changes the charge states, thus leading to different NP deposition behaviors. The SEM images of NP films, dynamic light scattering, and zeta potential results demonstrated that the charge control and restoration of interparticle interactions for aged NPs were achieved via simple ligand engineering. The charge control of colloidal NPs was found to be more dominant than the influence of aging, which can alter the surface charges of the NPs. The present results thus reveal that the charge formation on the colloidal NPs, which depends on the surface ligands, is an important controllable parameter in EPD.

14.
Dalton Trans ; 50(6): 2192-2199, 2021 Feb 16.
Article in English | MEDLINE | ID: mdl-33496697

ABSTRACT

The chemical transformation from zinc oxide (ZnO) to zinc sulphide (ZnS), using di-tert-butyl disulphide (TBDS) as a highly reactive sulphur precursor, is demonstrated herein. Through anion exchange, we investigate the phase and morphological changes associated with the nanoparticle (NP) transformation of ZnO to ZnS using TBDS. The Zn-O-S alloy was not formed through the anion exchange reaction, only the ZnO and ZnS phases were detected. The NPs were transformed from a solid sphere to a hollow structure, induced by the nanoscale Kirkendall effect. Even with the dramatic shape and phase changes occurring in the NPs, the Zn oxidation state remained as 2+ throughout the 2 h anion exchange reaction. In addition, trioctylphosphine (TOP), a soft base ligand, increased the anion exchange reaction rate, facilitating the reaction with TBDS. Furthermore, anion exchange with elemental sulphur required a longer reaction time (3 h) than that with TBDS (2 h). Consequently, this study offers not only insights into phase and morphological transformations by anion exchange, but also the advantages of utilizing TBDS as a sulphur precursor.

15.
Mol Ther Methods Clin Dev ; 13: 265-273, 2019 Jun 14.
Article in English | MEDLINE | ID: mdl-30859111

ABSTRACT

Glycogen storage disease type Ia (GSD Ia) is a rare inherited disease caused by mutations in the glucose-6-phosphatase (G6Pase) catalytic subunit gene (G6PC). Absence of G6Pase causes life-threatening hypoglycemia and long-term complications because of the accumulations of metabolic intermediates. Bezafibrate, a pan-peroxisome proliferator-activated receptor (PPAR) agonist, was administered in the context of genome editing with a zinc-finger nuclease-containing vector (AAV-ZFN) and a G6Pase donor vector (AAV-RoG6P). Bezafibrate treatment increased survival and decreased liver size (liver/body mass, p < 0.05) in combination with genome editing. Blood glucose has higher (p < 0.05) after 4 h of fasting, and liver glycogen accumulation (p < 0.05) was lower in association with higher G6Pase activity (p < 0.05). Furthermore, bezafibrate-treated mice had increased numbers of G6PC transgenes (p < 0.05) and higher ZFN activity (p < 0.01) in the liver compared with controls. PPAR-α expression was increased and PPAR-γ expression was decreased in bezafibrate-treated mice. Therefore, bezafibrate improved hepatocellular abnormalities and increased the transduction efficiency of AAV vector-mediated genome editing in liver, whereas higher expression of G6Pase corrected molecular signaling in GSD Ia. Taken together, bezafibrate shows promise as a drug for increasing AAV vector-mediated genome editing.

16.
Mol Ther Methods Clin Dev ; 15: 383-391, 2019 Dec 13.
Article in English | MEDLINE | ID: mdl-31890731

ABSTRACT

Glycogen storage disease type Ia (GSD Ia) is caused by mutations in the glucose-6-phosphatase (G6Pase) catalytic subunit gene (G6PC). GSD Ia complications include hepatocellular adenomas (HCA) with a risk for hepatocellular carcinoma (HCC) formation. Genome editing with adeno-associated virus (AAV) vectors containing a zinc-finger nuclease (ZFN) and a G6PC donor transgene was evaluated in adult mice with GSD Ia. Although mouse livers expressed G6Pase, HCA and HCC occurred following AAV vector administration. Interestingly, vector genomes were almost undetectable in the tumors but remained relatively high in adjacent liver (p < 0.01). G6Pase activity was decreased in tumors, in comparison with adjacent liver (p < 0.01). Furthermore, AAV-G6Pase vector-treated dogs with GSD Ia developed HCC with lower G6Pase activity (p < 0.01) in comparison with adjacent liver. AAV integration and tumor marker analysis in mice revealed that tumors arose from the underlying disorder, not from vector administration. Similarly to human GSD Ia-related HCA and HCC, mouse and dog tumors did not express elevated α-fetoprotein. Taken together, these results suggest that AAV-mediated gene therapy not only corrects hepatic G6Pase deficiency, but also has potential to suppress HCA and HCC in the GSD Ia liver.

17.
Cell Host Microbe ; 25(4): 602-616.e7, 2019 04 10.
Article in English | MEDLINE | ID: mdl-30902577

ABSTRACT

Establishing the balance between positive and negative innate immune mechanisms is crucial for maintaining homeostasis. Here we uncover the regulatory crosstalk between two previously unlinked innate immune receptor families: RIG-I, an anti-viral cytosolic receptor activated type I interferon production, and NLR (nucleotide-binding domain, leucine repeat domain-containing protein). We show that NLRP12 dampens RIG-I-mediated immune signaling against RNA viruses by controlling RIG-I's association with its adaptor MAVS. The nucleotide-binding domain of NLRP12 interacts with the ubiquitin ligase TRIM25 to prevent TRIM25-mediated, Lys63-linked ubiquitination and activation of RIG-I. NLRP12 also enhances RNF125-mediated, Lys48-linked degradative ubiquitination of RIG-I. Vesicular stomatitis virus (VSV) infection downregulates NLRP12 expression to allow RIG-I activation. Myeloid-cell-specific Nlrp12-deficient mice display a heightened interferon and TNF response and are more resistant to VSV infection. These results indicate that NLRP12 functions as a checkpoint for anti-viral RIG-I activation.


Subject(s)
DEAD Box Protein 58/immunology , DNA-Binding Proteins/immunology , Intracellular Signaling Peptides and Proteins/immunology , RNA Virus Infections/immunology , RNA Viruses/physiology , Transcription Factors/immunology , Animals , DEAD Box Protein 58/genetics , DNA-Binding Proteins/genetics , Female , Humans , Interferons/genetics , Interferons/immunology , Intracellular Signaling Peptides and Proteins/genetics , Male , Mice , Mice, Inbred C57BL , Protein Binding , RNA Virus Infections/genetics , RNA Virus Infections/virology , RNA Viruses/genetics , Transcription Factors/genetics , Ubiquitination
18.
PLoS One ; 13(7): e0200624, 2018.
Article in English | MEDLINE | ID: mdl-29990347

ABSTRACT

[This corrects the article DOI: 10.1371/journal.pone.0126456.].

19.
IUCrJ ; 5(Pt 6): 866-879, 2018 Nov 01.
Article in English | MEDLINE | ID: mdl-30443370

ABSTRACT

Poly(ADP-ribose) polymerase 1 (PARP-1), an enzyme that modifies nuclear proteins by poly(ADP-ribosyl)ation, regulates various cellular activities and restricts the lytic replication of oncogenic gammaherpesviruses by inhibiting the function of replication and transcription activator (RTA), a key switch molecule of the viral life cycle. A viral PARP-1-interacting protein (vPIP) encoded by murine gammaherpesvirus 68 (MHV-68) orf49 facilitates lytic replication by disrupting interactions between PARP-1 and RTA. Here, the structure of MHV-68 vPIP was determined at 2.2 Šresolution. The structure consists of 12 α-helices with characteristic N-terminal ß-strands (Nß) and forms a V-shaped-twist dimer in the asymmetric unit. Structure-based mutagenesis revealed that Nß and the α1 helix (residues 2-26) are essential for the nuclear localization and function of vPIP; three residues were then identified (Phe5, Ser12 and Thr16) that were critical for the function of vPIP and its interaction with PARP-1. A recombinant MHV-68 harboring mutations of these three residues showed severely attenuated viral replication both in vitro and in vivo. Moreover, ORF49 of Kaposi's sarcoma-associated herpesvirus also directly interacted with PARP-1, indicating a conserved mechanism of action of vPIPs. The results elucidate the novel molecular mechanisms by which oncogenic gammaherpesviruses overcome repression by PARP-1 using vPIPs.

20.
Sci Rep ; 8(1): 5187, 2018 03 26.
Article in English | MEDLINE | ID: mdl-29581468

ABSTRACT

Synaptic plasticity in the lamellar CA3 to CA1 circuitry has been extensively studied while interlamellar CA1 to CA1 connections have not yet received much attention. One of our earlier studies demonstrated that axons of CA1 pyramidal neurons project to neighboring CA1 neurons, implicating information transfer along a longitudinal interlamellar network. Still, it remains unclear whether long-term synaptic plasticity is present within this longitudinal CA1 network. Here, we investigate long-term synaptic plasticity between CA1 pyramidal cells, using in vitro and in vivo extracellular recordings and 3D holography glutamate uncaging. We found that the CA1-CA1 network exhibits NMDA receptor-dependent long-term potentiation (LTP) without direction or layer selectivity. By contrast, we find no significant long-term depression (LTD) under various LTD induction protocols. These results implicate unique synaptic properties in the longitudinal projection suggesting that the interlamellar CA1 network could be a promising structure for hippocampus-related information processing and brain diseases.


Subject(s)
CA1 Region, Hippocampal/physiology , Depressive Disorder/physiopathology , Long-Term Potentiation/physiology , Pyramidal Cells/physiology , Animals , CA1 Region, Hippocampal/diagnostic imaging , Depressive Disorder/diagnostic imaging , Humans , Mice , Neuronal Plasticity/physiology , Synapses/physiology , Synaptic Transmission/physiology
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