Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 20 de 70
Filter
Add more filters

Country/Region as subject
Publication year range
1.
Ann Neurol ; 84(5): 766-780, 2018 11.
Article in English | MEDLINE | ID: mdl-30295347

ABSTRACT

OBJECTIVE: Several small case series identified KCTD7 mutations in patients with a rare autosomal recessive disorder designated progressive myoclonic epilepsy (EPM3) and neuronal ceroid lipofuscinosis (CLN14). Despite the name KCTD (potassium channel tetramerization domain), KCTD protein family members lack predicted channel domains. We sought to translate insight gained from yeast studies to uncover disease mechanisms associated with deficiencies in KCTD7 of unknown function. METHODS: Novel KCTD7 variants in new and published patients were assessed for disease causality using genetic analyses, cell-based functional assays of patient fibroblasts and knockout yeast, and electron microscopy of patient samples. RESULTS: Patients with KCTD7 mutations can exhibit movement disorders or developmental regression before seizure onset, and are distinguished from similar disorders by an earlier age of onset. Although most published KCTD7 patient variants were excluded from a genome sequence database of normal human variations, most newly identified patient variants are present in this database, potentially challenging disease causality. However, genetic analysis and impaired biochemical interactions with cullin 3 support a causal role for patient KCTD7 variants, suggesting deleterious alleles of KCTD7 and other rare disease variants may be underestimated. Both patient-derived fibroblasts and yeast lacking Whi2 with sequence similarity to KCTD7 have impaired autophagy consistent with brain pathology. INTERPRETATION: Biallelic KCTD7 mutations define a neurodegenerative disorder with lipofuscin and lipid droplet accumulation but without defining features of neuronal ceroid lipofuscinosis or lysosomal storage disorders. KCTD7 deficiency appears to cause an underlying autophagy-lysosome defect conserved in yeast, thereby assigning a biological role for KCTD7. Ann Neurol 2018;84:774-788.


Subject(s)
Autophagy/genetics , Lysosomes/genetics , Neurodegenerative Diseases/genetics , Neurodegenerative Diseases/pathology , Potassium Channels/deficiency , Age of Onset , Child, Preschool , Female , Humans , Infant , Lysosomes/pathology , Male , Mutation , Pedigree , Potassium Channels/genetics , Saccharomyces cerevisiae Proteins/genetics
2.
Brain ; 140(11): 2879-2894, 2017 Nov 01.
Article in English | MEDLINE | ID: mdl-29053855

ABSTRACT

Genetic epilepsies are caused by mutations in a range of different genes, many of them encoding ion channels, receptors or transporters. While the number of detected variants and genes increased dramatically in the recent years, pleiotropic effects have also been recognized, revealing that clinical syndromes with various degrees of severity arise from a single gene, a single mutation, or from different mutations showing similar functional defects. Accordingly, several genes coding for GABAA receptor subunits have been linked to a spectrum of benign to severe epileptic disorders and it was shown that a loss of function presents the major correlated pathomechanism. Here, we identified six variants in GABRA3 encoding the α3-subunit of the GABAA receptor. This gene is located on chromosome Xq28 and has not been previously associated with human disease. Five missense variants and one microduplication were detected in four families and two sporadic cases presenting with a range of epileptic seizure types, a varying degree of intellectual disability and developmental delay, sometimes with dysmorphic features or nystagmus. The variants co-segregated mostly but not completely with the phenotype in the families, indicating in some cases incomplete penetrance, involvement of other genes, or presence of phenocopies. Overall, males were more severely affected and there were three asymptomatic female mutation carriers compared to only one male without a clinical phenotype. X-chromosome inactivation studies could not explain the phenotypic variability in females. Three detected missense variants are localized in the extracellular GABA-binding NH2-terminus, one in the M2-M3 linker and one in the M4 transmembrane segment of the α3-subunit. Functional studies in Xenopus laevis oocytes revealed a variable but significant reduction of GABA-evoked anion currents for all mutants compared to wild-type receptors. The degree of current reduction correlated partially with the phenotype. The microduplication disrupted GABRA3 expression in fibroblasts of the affected patient. In summary, our results reveal that rare loss-of-function variants in GABRA3 increase the risk for a varying combination of epilepsy, intellectual disability/developmental delay and dysmorphic features, presenting in some pedigrees with an X-linked inheritance pattern.


Subject(s)
Brain Diseases/genetics , Cleft Palate/genetics , Developmental Disabilities/genetics , Epilepsy/genetics , Facies , Intellectual Disability/genetics , Nystagmus, Pathologic/genetics , Receptors, GABA-A/genetics , Adolescent , Adult , Animals , Child , Child, Preschool , Female , Genetic Variation , Humans , Male , Microcephaly/genetics , Mutagenesis, Site-Directed , Oocytes/metabolism , Patch-Clamp Techniques , Pedigree , Receptors, GABA-A/metabolism , Syndrome , Xenopus laevis , Young Adult , gamma-Aminobutyric Acid/metabolism
3.
Hum Mutat ; 38(4): 409-425, 2017 04.
Article in English | MEDLINE | ID: mdl-28055140

ABSTRACT

Impairment of translation initiation and its regulation within the integrated stress response (ISR) and related unfolded-protein response has been identified as a cause of several multisystemic syndromes. Here, we link MEHMO syndrome, whose genetic etiology was unknown, to this group of disorders. MEHMO is a rare X-linked syndrome characterized by profound intellectual disability, epilepsy, hypogonadism and hypogenitalism, microcephaly, and obesity. We have identified a C-terminal frameshift mutation (Ile465Serfs) in the EIF2S3 gene in three families with MEHMO syndrome and a novel maternally inherited missense EIF2S3 variant (c.324T>A; p.Ser108Arg) in another male patient with less severe clinical symptoms. The EIF2S3 gene encodes the γ subunit of eukaryotic translation initiation factor 2 (eIF2), crucial for initiation of protein synthesis and regulation of the ISR. Studies in patient fibroblasts confirm increased ISR activation due to the Ile465Serfs mutation and functional assays in yeast demonstrate that the Ile465Serfs mutation impairs eIF2γ function to a greater extent than tested missense mutations, consistent with the more severe clinical phenotype of the Ile465Serfs male mutation carriers. Thus, we propose that more severe EIF2S3 mutations cause the full MEHMO phenotype, while less deleterious mutations cause a milder form of the syndrome with only a subset of the symptoms.


Subject(s)
Epilepsy , Eukaryotic Initiation Factor-2/genetics , Hypogonadism , Intellectual Disability/genetics , Mental Retardation, X-Linked/genetics , Microcephaly , Mutation , Amino Acid Sequence , Family Health , Female , Genitalia/abnormalities , Humans , Male , Mental Retardation, X-Linked/pathology , Obesity , Pedigree , Sequence Analysis, DNA/methods , Sequence Homology, Amino Acid , Syndrome
4.
Neurogenetics ; 18(3): 141-146, 2017 Jul.
Article in English | MEDLINE | ID: mdl-28620870

ABSTRACT

Glutaminyl tRNA synthase is highly expressed in the developing fetal human brain. Mutations in the glutaminyl-tRNA synthetase (QARS) gene have been reported in patients with progressive microcephaly, cerebral-cerebellar atrophy, and intractable seizures. We have previously reported a new recessive syndrome of severe linear growth retardation, poor weight gain, microcephaly, characteristic facial features, cutaneous syndactyly of the toes, high myopia, and intellectual disability in two sisters of Ashkenazi-Jewish origin (Eur J Med Genet 2014;57(6):288-92). Homozygosity mapping and whole exome sequencing revealed a homozygous missense (V476I) mutation in the QARS gene, located in the catalytic domain. The patient's fibroblasts demonstrated markedly reduced QARS amino acylation activity in vitro. Furthermore, the same homozygous mutation was found in an unrelated girl of Ashkenazi origin with the same phenotype. The clinical presentation of our patients differs from the original QARS-associated syndrome in the severe postnatal growth failure, absence of epilepsy, and minor MRI findings, thus further expanding the phenotypic spectrum of the glutaminyl-tRNA synthetase deficiency syndromes.


Subject(s)
Amino Acyl-tRNA Synthetases/genetics , Brain Diseases/genetics , Intellectual Disability/genetics , Microcephaly/genetics , Mutation/genetics , Brain/metabolism , Child , Epilepsy/genetics , Female , Homozygote , Humans , Phenotype
5.
Fetal Diagn Ther ; 42(1): 42-47, 2017.
Article in English | MEDLINE | ID: mdl-27710969

ABSTRACT

INTRODUCTION: We report the rare finding of recurrent periventricular pseudocysts (PVPC) in consecutive pregnancies in 4 families and their postnatal outcome. MATERIALS AND METHODS: We reviewed the databases of 3 large ultrasound units searching for the diagnosis of PVPC in 2 pregnancies of the same patient. RESULTS: The first case of recurrent PVPC was diagnosed in 2011 and since then 3 additional families were diagnosed (8 cases of PVPC all in all). All fetuses underwent fetal MRI that confirmed the presence of frontal or frontocaudal PVPC. Amniocentesis, when performed, demonstrated a normal karyotype. Termination of pregnancy was carried out in 2 pregnancies in 2 of 4 families. The remaining 6 pregnancies ended with a term delivery, and to date all babies are developing normally. CONCLUSION: The rare finding of recurrent brain PVPC in consecutive pregnancies raises the possibility of a hereditary etiology as opposed to a sporadic event. As in isolated PVPC, frontocaudal 'familial PVPC' appears to carry a favorable prognosis.


Subject(s)
Brain Neoplasms/diagnostic imaging , Cysts/diagnostic imaging , Family Health , Abortion, Induced , Adaptor Proteins, Signal Transducing/genetics , Brain Neoplasms/embryology , Brain Neoplasms/genetics , Brain Neoplasms/pathology , Cohort Studies , Cysts/embryology , Cysts/genetics , Cysts/pathology , Cytoskeletal Proteins , DNA Mutational Analysis , Electronic Health Records , Female , Follow-Up Studies , Frontal Lobe , Humans , Infant, Newborn , Israel , Magnetic Resonance Imaging , Membrane Proteins/genetics , Mutation , Pregnancy , Prognosis , Retrospective Studies , Term Birth , Tumor Burden , Ultrasonography, Prenatal
6.
Epilepsia ; 57(11): 1858-1869, 2016 11.
Article in English | MEDLINE | ID: mdl-27665735

ABSTRACT

OBJECTIVE: IQSEC2 is an X-linked gene associated with intellectual disability (ID) and epilepsy. Herein we characterize the epilepsy/epileptic encephalopathy of patients with IQSEC2 pathogenic variants. METHODS: Forty-eight patients with IQSEC2 variants were identified worldwide through Medline search. Two patients were recruited from our early onset epileptic encephalopathy cohort and one patient from personal communication. The 18 patients who have epilepsy in addition to ID are the subject of this study. Information regarding the 18 patients was ascertained by questionnaire provided to the treating clinicians. RESULTS: Six affected individuals had an inherited IQSEC2 variant and 12 had a de novo one (male-to-female ratio, 12:6). The pathogenic variant types were as follows: missense (8), nonsense (5), frameshift (1), intragenic duplications (2), translocation (1), and insertion (1). An epileptic encephalopathy was diagnosed in 9 (50%) of 18 patients. Seizure onset ranged from 8 months to 4 years; seizure types included spasms, atonic, myoclonic, tonic, absence, focal seizures, and generalized tonic-clonic (GTC) seizures. The electroclinical syndromes could be defined in five patients: late-onset epileptic spasms (three) and Lennox-Gastaut or Lennox-Gastaut-like syndrome (two). Seizures were pharmacoresistant in all affected individuals with epileptic encephalopathy. The epilepsy in the other nine patients had a variable age at onset from infancy to 18 years; seizure types included GTC and absence seizures in the hereditary cases and GTC and focal seizures in de novo cases. Seizures were responsive to medical treatment in most cases. All 18 patients had moderate to profound intellectual disability. Developmental regression, autistic features, hypotonia, strabismus, and white matter changes on brain magnetic resonance imaging (MRI) were prominent features. SIGNIFICANCE: The phenotypic spectrum of IQSEC2 disorders includes epilepsy and epileptic encephalopathy. Epileptic encephalopathy is a main clinical feature in sporadic cases. IQSEC2 should be evaluated in both male and female patients with an epileptic encephalopathy.


Subject(s)
Epilepsy/genetics , Epilepsy/physiopathology , Guanine Nucleotide Exchange Factors/genetics , Mutation/genetics , Adolescent , Adult , Brain/diagnostic imaging , Child , Child, Preschool , Cohort Studies , Electroencephalography , Epilepsy/diagnostic imaging , Female , Genetic Association Studies , Humans , Magnetic Resonance Imaging , Male , Phenotype , Young Adult
7.
J Med Genet ; 51(5): 303-8, 2014 May.
Article in English | MEDLINE | ID: mdl-24577744

ABSTRACT

BACKGROUND: Progressive cerebello-cerebral atrophy (PCCA) leading to profound mental retardation, progressive microcephaly, spasticity and early onset epilepsy, was diagnosed in four non-consanguineous apparently unrelated families of Jewish Moroccan ancestry. Common founder mutation(s) were assumed. METHODS: Genome-wide linkage analysis and whole exome sequencing were done, followed by realtime PCR and immunofluorescent microscopy. RESULTS: Genome-wide linkage analysis mapped the disease-associated gene to 0.5 Mb on chromosome 17p13.3. Whole exome sequencing identified only two mutations within this locus, which were common to the affected individuals: compound heterozygous mutations in VPS53, segregating as expected for autosomal recessive heredity within all four families, and common in Moroccan Jews (∼1:37 carrier rate). The Golgi-associated retrograde protein (GARP) complex is involved in the retrograde pathway recycling endocytic vesicles to Golgi; c.2084A>G and c.1556+5G>A VPS53 founder mutations are predicted to affect the C-terminal domain of VPS53, known to be critical to its role as part of this complex. Immunofluorescent microscopy demonstrated swollen and abnormally numerous CD63 positive vesicular bodies, likely intermediate recycling/late endosomes, in fibroblasts of affected individuals. CONCLUSIONS: Autosomal recessive PCCA type 2 is caused by VPS53 mutations.


Subject(s)
Atrophy/genetics , Cerebellum/pathology , Mutation , Vesicular Transport Proteins/genetics , Adolescent , Adult , Child, Preschool , Chromosome Mapping , Female , Genes, Recessive , Genome-Wide Association Study , Humans , Male , Membrane Proteins/genetics , Membrane Proteins/metabolism , Pedigree , Young Adult
8.
Neurogenetics ; 15(2): 107-13, 2014 May.
Article in English | MEDLINE | ID: mdl-24526230

ABSTRACT

Mutations in the TUBB4A gene have been identified so far in two neurodegenerative disorders with extremely different clinical features and course: whispering dysphonia, also known as dystonia type 4 (DYT4), and hypomyelination with atrophy of the basal ganglia and cerebellum (H-ABC). We describe a patient with slowly progressive spastic paraparesis, segmental dystonia, intellectual disability, behavioral problems, and evidence of permanent, incomplete myelination associated with progressive cerebellar atrophy. Whole exome sequencing revealed a novel E410K de novo heterozygous mutation in the TUBB4A gene. The clinical and radiological picture of our patient is different from the classic phenotype; thus, it expands the phenotypic variation of TUBB4A-gene-related disorders.


Subject(s)
Leukoencephalopathies/genetics , Mutation , Neurodegenerative Diseases/genetics , Phenotype , Tubulin/genetics , Child , Heterozygote , Humans , Leukoencephalopathies/complications , Male , Neurodegenerative Diseases/complications
9.
Epilepsia ; 55(7): 994-1000, 2014 Jul.
Article in English | MEDLINE | ID: mdl-24888894

ABSTRACT

OBJECTIVE: De novo SCN8A mutations have been reported in patients with epileptic encephalopathy. Herein we report seven patients with de novo heterozygous SCN8A mutations, which were found in our comprehensive genetic analysis (target capture or whole-exome sequencing) for early onset epileptic encephalopathies (EOEEs). METHODS: A total of 163 patients with EOEEs without mutations in known genes, including 6 with malignant migrating partial seizures in infancy (MMPSI), and 60 with unclassified EOEEs, were analyzed by target capture (28 samples) or whole-exome sequencing (135 samples). RESULTS: We identified de novo SCN8A mutations in 7 patients: 6 of 60 unclassified EOEEs (10.0%), and one of 6 MMPSI cases (16.7%). The mutations were scattered through the entire gene: four mutations were located in linker regions, two in the fourth transmembrane segments, and one in the C-terminal domain. The type of the initial seizures was variable including generalized tonic-clonic, atypical absence, partial, apneic attack, febrile convulsion, and loss of tone and consciousness. Onset of seizures was during the neonatal period in two patients, and between 3 and 7 months of age in five patients. Brain magnetic resonance imaging (MRI) showed cerebellar and cerebral atrophy in one and six patients, respectively. All patients with SCN8A missense mutations showed initially uncontrollable seizures by any drugs, but eventually one was seizure-free and three were controlled at the last examination. All patients showed developmental delay or regression in infancy, resulting in severe intellectual disability. SIGNIFICANCE: Our data reveal that SCN8A mutations can cause variable phenotypes, most of which can be diagnosed as unclassified EOEEs, and rarely as MMPSI. Together with previous reports, our study further indicates that genetic testing of SCN8A should be considered in children with unclassified severe epilepsy.


Subject(s)
Mutation, Missense/genetics , NAV1.6 Voltage-Gated Sodium Channel/genetics , Spasms, Infantile/diagnosis , Spasms, Infantile/genetics , Adolescent , Child , Child, Preschool , Early Diagnosis , Electroencephalography/methods , Epilepsy/complications , Epilepsy/diagnosis , Epilepsy/genetics , Female , Humans , Infant , Intellectual Disability/diagnosis , Intellectual Disability/etiology , Intellectual Disability/genetics , Male , Phenotype , Spasms, Infantile/complications
10.
J Neural Transm (Vienna) ; 121(5): 549-53, 2014 May.
Article in English | MEDLINE | ID: mdl-24366529

ABSTRACT

Centronuclear myopathy (CNM) is a rare hereditary myopathy characterized by centrally located muscle fiber nuclei. Mutations in the dynamin 2 (DNM2) gene are estimated to account for about 50 % of CNM cases. Electromyographic recordings in CNM may show myopathic motor unit potentials without spontaneous activity at rest. Myotonic discharges, a distinctive electrical activity caused by membrane hyperexcitability, are characteristic of certain neuromuscular disorders. Such activity has been reported in only one CNM case without a known genetic cause. We sequenced the DNM2 gene and the genes associated with myotonia (CLCN1, SCN4A, DMPK and ZNF9) in a sporadic adult patient with CNM and myotonic discharges. Sequencing the entire coding region and exon-intron boundaries revealed a heterozygous c.1106g-a substitution in exon 8, resulting in a R369Q change in the DNM2. Sequencing the CLCN1, SCN4A, DMPK and ZNF9 genes ruled out mutations in these genes. This is the first report of DNM2-related CNM presenting with myotonia. The diagnosis of CNM should be considered in patients with myotonic discharges of an unknown cause.


Subject(s)
Dynamin II/genetics , Myopathies, Structural, Congenital/complications , Myopathies, Structural, Congenital/genetics , Myotonia/complications , Myotonia/genetics , Adult , Base Sequence , Chloride Channels/genetics , DNA Mutational Analysis , Electromyography , Female , Humans , Muscle, Skeletal/pathology , Muscle, Skeletal/physiopathology , Myopathies, Structural, Congenital/pathology , Myopathies, Structural, Congenital/physiopathology , Myotonia/pathology , Myotonia/physiopathology , Myotonin-Protein Kinase/genetics , NAV1.4 Voltage-Gated Sodium Channel/genetics , RNA-Binding Proteins/genetics
11.
Am J Hum Genet ; 87(4): 538-44, 2010 Oct 08.
Article in English | MEDLINE | ID: mdl-20920667

ABSTRACT

The essential micronutrient selenium is found in proteins as selenocysteine (Sec), the only genetically encoded amino acid whose biosynthesis occurs on its cognate tRNA in humans. In the final step of selenocysteine formation, the essential enzyme SepSecS catalyzes the conversion of Sep-tRNA to Sec-tRNA. We demonstrate that SepSecS mutations cause autosomal-recessive progressive cerebellocerebral atrophy (PCCA) in Jews of Iraqi and Moroccan ancestry. Both founder mutations, common in these two populations, disrupt the sole route to the biosynthesis of the 21st amino acid, Sec, and thus to the generation of selenoproteins in humans.


Subject(s)
Amino Acyl-tRNA Synthetases/genetics , Cerebellum/pathology , Cerebral Cortex/pathology , Heredodegenerative Disorders, Nervous System/genetics , Jews/genetics , Selenocysteine/biosynthesis , Atrophy/genetics , Base Sequence , Chromosome Mapping , Genes, Recessive , Heredodegenerative Disorders, Nervous System/pathology , Humans , Iraq/ethnology , Molecular Sequence Data , Morocco/ethnology , Mutation/genetics , Pedigree , Sequence Alignment , Sequence Analysis, DNA
12.
Epilepsia ; 54(1): e13-5, 2013 Jan.
Article in English | MEDLINE | ID: mdl-23061632

ABSTRACT

We report resolution of an epileptic encephalopathy by administration of transdermal nicotine patches in an adolescent with severe nonlesional refractory frontal lobe epilepsy. The 18.5-year-old female patient had refractory epilepsy from the age of 11. Recurrent electroencephalography (EEG) recordings showed mostly generalized activity, albeit with right frontal predominance. Almost all antiepileptic medications failed to provide benefit. She developed an encephalopathic state with cognitive decline. The nonlesional frontal lobe epilepsy and a family history of a cousin with nocturnal epilepsy with frontal origin suggested genetic etiology. Transdermal nicotine patches brought complete resolution of the seizures, normalization of the EEG, and a significant improvement in her thinking process and speech organization. Sequencing of the CHRNB2 and CHRNA4 genes did not detect a mutation. Transdermal nicotine patches should be considered in severe pharmacoresistant frontal lobe epilepsy.


Subject(s)
Epilepsy, Frontal Lobe/drug therapy , Nicotine/therapeutic use , Tobacco Use Cessation Devices , Adolescent , Electroencephalography , Epilepsy, Frontal Lobe/physiopathology , Female , Humans , Nicotine/administration & dosage , Treatment Outcome
13.
Isr Med Assoc J ; 15(9): 477-80, 2013 Sep.
Article in English | MEDLINE | ID: mdl-24340836

ABSTRACT

BACKGROUND: Type 1 diabetes in humans is an autoimmune disease in which Tcells target pancreatic islets of Langerhans, leading to the progressive destruction of the insulin-producing beta cells. Both genetic and environmental factors contribute to the development of autoimmune diabetes. The non-obese diabetic (NOD) mouse model of human type 1 diabetes demonstrates two missense mutations in the transient receptor potentialvanilloid receptor-1 (TRPVi) gene. OBJECTIVES: To investigate whether polymorphism in the TRPV1 gene may play a role in the predisposition to human type 1 diabetes. METHODS: We genotyped 146 Ashkenazi Jewish type 1 diabetic patients and 205 Ashkenazi Jewish healthy controls for the rs222747 (M3151), rs224534 (T4691) and rs8065080 (1585V) variants of the TRPV1 gene. RESULTS: There was a significant increase in the rs222747 (M3151) variant of the TRPV1 gene in the type 1 diabetes cohort compared to the control: rs222747 (M3151) homozygous: (61% vs. 48.3%, P = 0.02). Logistic regression analysis revealed that type 1 diabetes was significantly associated with rs222747 (M3151), such that having diabetes increased the odds of rs222747 homozygosity (M3151) by 67.2%, odds ratio 1.6, 95% confidence interval 1.08-2.57, P < 0.02. No difference was found in the rs224534 (T4691) and rs8065080 (1585V) allelic variants. There was no difference in any of the TRPV1 variants by gender, age when type 1 diabetes was diagnosed, body mass index, glycemic control, blood pressure, positive autoantibodies (ICA, GAD, IAA), and other autoimmune diseases. CONCLUSIONS: Our study demonstrates that TRPV1 may be a susceptible gene for type 1 diabetes in an Ashkenazi Jewish population. These results should be replicated in the same ethnic group and in other ethnic groups.


Subject(s)
Diabetes Mellitus, Type 1/genetics , Jews/genetics , TRPV Cation Channels/genetics , Adult , Female , Genetic Predisposition to Disease , Humans , Logistic Models , Male , Polymorphism, Single Nucleotide
14.
Neurogenetics ; 13(1): 73-6, 2012 Feb.
Article in English | MEDLINE | ID: mdl-22290197

ABSTRACT

We recently identified a new locus for spastic paraplegia type 47 (SPG47) in a consanguineous Arabic family with two affected siblings with progressive spastic paraparesis,intellectual disability, seizures, periventricular white matter changes and thin corpus callosum. Using exome sequencing, we now identified a novel AP4B1 frameshift mutation (c.664delC) in this family. This mutation was homozygous in both affected siblings and heterozygous in both parents. The mutant allele was absent in 316 Caucasian and 200 ethnically matched control chromosomes. We propose that AP4B1 mutations cause SPG47 and should be considered in early onset spastic paraplegia with intellectual disability.


Subject(s)
Adaptor Protein Complex 4/genetics , Frameshift Mutation , Spastic Paraplegia, Hereditary/genetics , Adaptor Protein Complex 4/metabolism , Base Sequence , Consanguinity , DNA Mutational Analysis , Ethnicity/genetics , Exons , Female , Humans , Intellectual Disability/genetics , Male , Spastic Paraplegia, Hereditary/pathology , Spastic Paraplegia, Hereditary/physiopathology
15.
Acta Neuropathol ; 124(4): 575-81, 2012 Oct.
Article in English | MEDLINE | ID: mdl-22752422

ABSTRACT

Congenital myopathies describe a group of inherited muscle disorders with neonatal or infantile onset typically associated with muscle weakness, respiratory involvement and delayed motor milestones. We previously reported a novel congenital myopathy in an inbred Samaritan family. All patients displayed severe neonatal hypotonia and respiratory distress, and unlike other congenital myopathies, a constantly improving health status. As clinical and pathological data did not point to preferential candidate genes, we performed exome sequencing complemented by linkage analysis to identify the mutation causing the benign Samaritan congenital myopathy. We identified the homozygous p.Tyr1088Cys mutation in RYR1, encoding the skeletal muscle ryanodine receptor. This sarcoplasmic reticulum calcium channel is a key regulator of excitation-contraction coupling (ECC). Western blot and immunohistofluorescence revealed a significant decrease of the RYR1 protein level and an abnormal organization of skeletal muscle triad markers as caveolin-3, dysferlin and amphiphysin 2. RYR1 mutations are associated with different myopathies and malignant hyperthermia susceptibility. The index patient had mild hyperthermia following anesthesia, indicating that the inbred Samaritan population might be a risk group for this disorder. Our results suggest an aberrant ECC as the primary cause of this disease, and broaden the clinical consequences of RYR1 defects.


Subject(s)
Mutation , Myopathy, Central Core/genetics , Ryanodine Receptor Calcium Release Channel/genetics , Blotting, Western , Computational Biology , DNA Mutational Analysis , Female , Fluorescent Antibody Technique , Humans , Infant, Newborn , Male , Myopathy, Central Core/pathology , Oligonucleotide Array Sequence Analysis , Pedigree , Young Adult
16.
Am J Med Genet A ; 158A(6): 1395-9, 2012 Jun.
Article in English | MEDLINE | ID: mdl-22585544

ABSTRACT

Interstitial deletions of the long arm of chromosome 6 are rare. Clinically, this is a recognizable microdeletion syndrome associated with intellectual disability (ID), acquired microcephaly, typical dysmorphic features, structural anomalies of the brain, and nonspecific multiple organ anomalies. Most of the reported cases have cytogenetically visible interstitial deletions or subtelomeric microdeletions. We report on a boy with global developmental delay, distinct dysmorphic features, dysgenesis of the corpus callosum, limb anomalies, and genital hypoplasia who has a small interstitial deletion of the long arm of chromosome 6 detected by comparative genomic hybridization (CGH). The deleted region spans around 1 Mb of DNA and contains only two coding genes, ARID1B and ZDHHC14. To the best of our knowledge, this case represents the typical phenotype with the smallest deletion reported so far. We discuss the possible role of these genes in the phenotypic manifestations.


Subject(s)
Abnormalities, Multiple/genetics , Chromosome Deletion , Chromosomes, Human, Pair 6 , Abnormalities, Multiple/diagnosis , Brain/pathology , Comparative Genomic Hybridization , Facies , Humans , In Situ Hybridization, Fluorescence , Infant , Male , Syndrome
17.
J Genet Couns ; 21(4): 557-63, 2012 Aug.
Article in English | MEDLINE | ID: mdl-22109111

ABSTRACT

Facioscapulohumeral muscular dystrophy (FSHD), is a dominantly inherited, late onset, progressive disease. At present, no treatment or prevention of symptoms are available. There is considerable clinical variability, even within families. The gene whose defect causes FSHD has not been identified, but molecular diagnosis can be made by analyzing D4Z4 repeat length on chromosome 4q35. The results can support or rule out the clinical diagnosis of FSHD, but there are also "gray zone", non-conclusive results. During the years 2000-6, 66 individuals (including 7 asymptomatic individuals), were tested in our institute for D4Z4 repeat number. In 77% of the cases the results were conclusive: two thirds of them supported a diagnosis of FSHD while in a third this diagnosis was ruled out. In 23% the results were in the gray zone. Cognitive involvement was rare, occurring only when the D4Z4 repeat size was very small (<15 kb). Maximal utilization of the existing molecular test for FSHD demands detailed clinical and family pedigree information. We recommend that comprehensive genetic counseling always be given before and after molecular testing for FSHD, in addition to the neurological follow-up. Presymptomatic testing should only be offered when complete molecular evaluation can be offered, including 4qA and 4qB variant analysis.


Subject(s)
Genetic Counseling , Genetic Testing , Muscular Dystrophy, Facioscapulohumeral/diagnosis , Chromosomes, Human, Pair 4 , Female , Humans , Israel , Male , Pedigree , Sequence Analysis, DNA
18.
Gut ; 60(8): 1060-7, 2011 Aug.
Article in English | MEDLINE | ID: mdl-21257989

ABSTRACT

OBJECTIVE: Genome-wide association studies have identified multiple Crohn's disease (CD) susceptibility loci, including association with non-coding intergenic single-nucleotide polymorphisms (SNPs) at 10q21. DESIGN: To fine-map the 10q21 locus, the authors genotyped 86 SNPs in 1632 CD cases and 961 controls and performed single-marker and conditional analyses using logistic regression. RESULTS: Association with CD risk spanning 11 SNPs (p<0.001) was observed. The most significant association observed was at the non-synonymous SNP, rs7076156 (Ala62Thr), in ZNF365. The alanine allele was over-represented in CD (p=5.23×10⁻7; OR=1.39 (95% CI 1.22 to 1.58)); allele frequency of 76% in CD and 69.7% in controls). Conditional analysis on rs7076156 nullified all other significant associations, suggesting that this is the causative variant at this locus. Four isoforms of ZNF365 have previously been identified, and rs7076156 is located in an exon unique to ZNF365 isoform D. The authors demonstrated, using reverse transcription-PCR, expression of ZNF365D in intestinal resections from both CD subjects and controls. Markedly reduced mean expression levels of ZNF365D were identified in Epstein-Barr virus-transformed lymphoblastoid cell lines from CD subjects homozygous for the risk allele (Ala). A whole-genome microarray expression study further suggested that the Ala62Thr change in ZNF365 isoform D is related to differential expression of the genes ARL4A, MKKS, RRAGD, SUMF2, TDR1 and ZNF148 in CD. CONCLUSIONS: Collectively, these data support the hypothesis that the non-synonymous Ala62Thr SNP, rs7076156, underlies the association between 10q21 and CD risk and suggest that this SNP acts by altering expression of genes under the control of ZNF365 isoform D.


Subject(s)
Crohn Disease/genetics , DNA-Binding Proteins/genetics , Genomic Structural Variation , RNA/genetics , Transcription Factors/genetics , Alleles , B-Lymphocytes/immunology , B-Lymphocytes/pathology , Biopsy , Cell Line , Crohn Disease/metabolism , Crohn Disease/pathology , DNA-Binding Proteins/metabolism , Genetic Predisposition to Disease , Genome-Wide Association Study , Genotype , Humans , Intestinal Mucosa/metabolism , Intestines/pathology , Polymorphism, Single Nucleotide , Reverse Transcriptase Polymerase Chain Reaction , Transcription Factors/metabolism , Zinc Fingers
19.
Clin Immunol ; 140(3): 284-90, 2011 Sep.
Article in English | MEDLINE | ID: mdl-21624848

ABSTRACT

The relative frequency of the different forms of SCID may vary in different countries. The most frequent form in Israel is the autosomal-recessive T-B- SCID or Omenn syndrome while X-linked SCID is rare. We report our immunological and genetic analyses in multicentre study of patients presenting with either T-B- SCID or Omenn syndrome. Among 16 patients, we identified 7 novel mutations in 6 patients. In the RAG1 gene we detected two novel mutations: L454Q and 469 fs-4bpdel. In the RAG 2 gene: 3 novel mutations: D65Y, G157V, and E480X. One T-B- SCID patient was found to be a compound heterozygote for new mutations in the ADA gene: W264X and R235W. Prenatal diagnosis was performed in 8 families while others refused due to religious reasons. Identification of the new mutations expands our knowledge regarding the unique features of SCID phenotype in Israel and may help the families seeking for genetic counseling.


Subject(s)
DNA-Binding Proteins/genetics , Homeodomain Proteins/genetics , Mutation , Nuclear Proteins/genetics , Severe Combined Immunodeficiency/genetics , Arabs/genetics , Bone Marrow Transplantation , Female , Humans , Infant, Newborn , Israel , Jews/genetics , Male , Pregnancy , Prenatal Diagnosis , Severe Combined Immunodeficiency/therapy
20.
Am J Med Genet A ; 155A(12): 2991-6, 2011 Dec.
Article in English | MEDLINE | ID: mdl-22052843

ABSTRACT

Proximal duplications of the long arm of chromosome 16 are rare and only a few patients have been reported. Clinically, the patients do not have a distinctive syndromic appearance; however they all show some degree of intellectual disability and most have severely delayed speech development. We report on a child presenting with mild-to-moderate intellectual disability, microcephaly, language dyspraxia, and mild dysmorphisms who was found to have a mosaic gain of chromosome 16q (16q11.2-16q12.1). Magnetic resonance imaging done at the age of 4 years demonstrated cerebellar cortical dysplasia involving the vermis and hemispheres. This is the first report of cerebellar anomalies in a patient with partial trisomy 16q. The genes ZNF423 and CBLN1 found in the duplicated region play a role in the development of the cerebellum and may be responsible for the cerebellar cortical dysplasia.


Subject(s)
Genetic Markers/genetics , Intellectual Disability/genetics , Malformations of Cortical Development/genetics , Microcephaly/genetics , Trisomy , Brain/pathology , Child, Preschool , Chromosomes, Human, Pair 16 , Comparative Genomic Hybridization , Humans , In Situ Hybridization, Fluorescence , Intellectual Disability/diagnosis , Magnetic Resonance Imaging , Male , Malformations of Cortical Development/diagnosis , Microcephaly/diagnosis , Mosaicism , Phenotype
SELECTION OF CITATIONS
SEARCH DETAIL