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1.
Int J Obes (Lond) ; 41(6): 894-901, 2017 06.
Article in English | MEDLINE | ID: mdl-27916987

ABSTRACT

BACKGROUND/OBJECTIVE: Weight loss is often followed by weight regain after the dietary intervention (DI). Cellular stress is increased in adipose tissue of obese individuals. However, the relation between cellular stress and weight regain is unclear. Previously, we observed increased adipose tissue cellular stress of participants regaining weight compared with participants maintaining weight loss. In the current study, we further investigated the relation between weight regain and changes in the expression of stress-related genes and stress protein levels to determine possible predictors of weight regain. PARTICIPANTS/METHODS: In this randomized controlled trial, sixty-one healthy overweight/obese participants followed a DI of either a 5-week very-low-calorie diet (500 kcal per day) or a 12-week low-calorie diet (1250 kcal per day; WL period) with a subsequent 4-week weight stable diet (WS period), and a 9-month follow-up. The WL and WS period taken together was named the DI. Abdominal subcutaneous adipose tissue biopsies were collected in 53 participants for microarray and liquid chromatography-mass spectrometry analysis. RNA and protein levels for a broad set of stress-related genes were correlated to the weight regain percentage. RESULTS: Different gene sets correlated to weight regain percentage during WS and DI. Bioinformatics clustering suggests that during the WS phase-defined genes for actin filament dynamics, glucose handling and nutrient sensing are related to weight regain. HIF-1 (hypoxia-inducible factor-1) is indicated as an important regulator. With regard to DI, clustering of correlated genes indicate that LGALS1, ENO1 and ATF2 are important nodes for conferring risk for weight regain. CONCLUSIONS: Our present findings indicate that the risk for weight regain is related to expression changes of distinct sets of stress-related genes during the first 4 weeks after returning to energy balance, and during the DI. Further research is required to investigate the mechanistic significance of these findings and find targets for preventing weight regain.


Subject(s)
Adipocytes/metabolism , Body Weight Maintenance/physiology , Obesity/diet therapy , Overweight/physiopathology , Oxidative Stress/physiology , Subcutaneous Fat, Abdominal/metabolism , Weight Loss/physiology , Activating Transcription Factor 2 , Adult , Biomarkers, Tumor , Caloric Restriction , Computational Biology , DNA-Binding Proteins , Energy Metabolism , Female , Galectin 1 , Gene Expression Regulation/physiology , Humans , Male , Obesity/genetics , Obesity/metabolism , Overweight/metabolism , Phosphopyruvate Hydratase , Tumor Suppressor Proteins , Weight Gain/physiology
2.
Int J Obes (Lond) ; 41(2): 309-316, 2017 02.
Article in English | MEDLINE | ID: mdl-27840413

ABSTRACT

BACKGROUND/OBJECTIVES: Moderate weight loss (WL) can ameliorate adverse health effects associated with obesity, reflected by an improved adipose tissue (AT) gene expression profile. However, the effect of rate of WL on the AT transcriptome is unknown. We investigated the global AT gene expression profile before and after two different rates of WL that resulted in similar total WL, and after a subsequent weight stabilization period. SUBJECTS/METHODS: In this randomized controlled trial, 25 male and 28 female individuals (body mass index (BMI): 28-35 kg m-2) followed either a low-calorie diet (LCD; 1250 kcal day-1) for 12 weeks or a very-low-calorie diet (VLCD; 500 kcal day-1) for 5 weeks (WL period) and a subsequent weight stable (WS) period of 4 weeks. The WL period and WS period together is termed dietary intervention (DI) period. Abdominal subcutaneous AT biopsies were collected for microarray analysis and gene expression changes were calculated for all three periods in the LCD group, VLCD group and between diets (ΔVLCD-ΔLCD). RESULTS: WL was similar between groups during the WL period (LCD: -8.1±0.5 kg, VLCD: -8.9±0.4 kg, difference P=0.25). Overall, more genes were significantly regulated and changes in gene expression appeared more pronounced in the VLCD group compared with the LCD group. Gene sets related to mitochondrial function, adipogenesis and immunity/inflammation were more strongly upregulated on a VLCD compared with a LCD during the DI period (positive ΔVLCD-ΔLCD). Neuronal and olfactory-related gene sets were decreased during the WL period and DI period in the VLCD group. CONCLUSIONS: The rate of WL (LCD vs VLCD), with similar total WL, strongly regulates AT gene expression. Increased mitochondrial function, angiogenesis and adipogenesis on a VLCD compared with a LCD reflect potential beneficial diet-induced changes in AT, whereas differential neuronal and olfactory regulation suggest functions of these genes beyond the current paradigm.


Subject(s)
Adipocytes/metabolism , Gene Expression Regulation , Obesity/genetics , Obesity/physiopathology , Overweight/genetics , Overweight/physiopathology , Subcutaneous Fat, Abdominal/metabolism , Weight Loss/genetics , Adipogenesis , Caloric Restriction , Diet, Reducing , Extracellular Matrix/metabolism , Female , Humans , Male , Middle Aged , Tissue Array Analysis , Weight Loss/physiology
3.
Int J Obes (Lond) ; 41(5): 722-728, 2017 05.
Article in English | MEDLINE | ID: mdl-28179648

ABSTRACT

BACKGROUND/OBJECTIVES: Although adipose tissue (AT) hypoxia is present in rodent models of obesity, evidence for this in humans is limited. Here, we investigated the effects of diet-induced weight loss (WL) on abdominal subcutaneous AT oxygen tension (pO2), AT blood flow (ATBF), AT capillary density, AT morphology and transcriptome, systemic inflammatory markers and insulin sensitivity in humans. SUBJECTS/METHODS: Fifteen overweight and obese individuals underwent a dietary intervention (DI), consisting of a 5-week very-low-calorie diet (VLCD, 500 kcal day-1; WL), and a subsequent 4-week weight stable diet (WS). Body composition, AT pO2 (optochemical monitoring), ATBF (133Xe washout), and whole-body insulin sensitivity were determined, and AT biopsies were collected at baseline, end of WL (week 5) and end of WS (week 9). RESULTS: Body weight, body fat percentage and adipocyte size decreased significantly during the DI period. The DI markedly decreased AT pO2 and improved insulin sensitivity, but did not alter ATBF. Finally, the DI increased AT gene expression of pathways related to mitochondrial biogenesis and non-mitochondrial oxygen consumption. CONCLUSIONS: VLCD-induced WL markedly decreases abdominal subcutaneous AT pO2, which is paralleled by a reduction in adipocyte size, increased AT gene expression of mitochondrial biogenesis markers and non-mitochondrial oxygen consumption pathways, and improved whole-body insulin sensitivity in humans.


Subject(s)
Inflammation/physiopathology , Insulin Resistance/physiology , Insulin/metabolism , Obesity/physiopathology , Overweight/physiopathology , Oxygen/metabolism , Subcutaneous Fat, Abdominal/metabolism , Weight Loss/physiology , Adipocytes/physiology , Cell Hypoxia/physiology , Diet, Reducing , Female , Gene Expression Regulation , Humans , Inflammation/diet therapy , Inflammation/metabolism , Male , Middle Aged , Obesity/diet therapy , Obesity/metabolism , Overweight/diet therapy , Overweight/metabolism , Oxygen Consumption , Phenotype , Treatment Outcome
4.
Int J Obes (Lond) ; 38(3): 470-3, 2014 Mar.
Article in English | MEDLINE | ID: mdl-23958793

ABSTRACT

Polyphenolic compounds, such as resveratrol, have recently received widespread interest because of their ability to mimic effects of calorie restriction. The objective of the present study was to gain more insight into the effects of 30 days resveratrol supplementation on adipose tissue morphology and underlying processes. Eleven healthy obese men were supplemented with placebo and resveratrol for 30 days (150 mg per day), separated by a 4-week washout period in a double-blind randomized crossover design. A postprandial abdominal subcutaneous adipose tissue biopsy was collected to assess adipose tissue morphology and gene expression using microarray analysis. Resveratrol significantly decreased adipocyte size, with a shift toward a reduction in the proportion of large and very-large adipocytes and an increase in small adipocytes. Microarray analysis revealed downregulation of Wnt and Notch signaling pathways and upregulation of pathways involved in cell cycle regulation after resveratrol supplementation, suggesting enhanced adipogenesis. Furthermore, lysosomal/phagosomal pathway and transcription factor EB were upregulated reflecting an alternative pathway of lipid breakdown by autophagy. Further research is necessary to investigate whether resveratrol improves adipose tissue function.


Subject(s)
Adipocytes/drug effects , Adipocytes/metabolism , Adipose Tissue/metabolism , Enzyme Inhibitors/therapeutic use , Obesity/drug therapy , Stilbenes/therapeutic use , Adipogenesis/drug effects , Adipose Tissue/drug effects , Adult , Aged , Cross-Over Studies , Double-Blind Method , Gene Expression Profiling , Humans , Male , Middle Aged , Obesity/genetics , Obesity/metabolism , Receptors, Notch/drug effects , Receptors, Notch/metabolism , Resveratrol , Signal Transduction/drug effects , Treatment Outcome , Wnt Signaling Pathway/drug effects
5.
Nat Genet ; 27(2): 215-7, 2001 Feb.
Article in English | MEDLINE | ID: mdl-11175793

ABSTRACT

Neural tube defects (NTDs), including anencephaly and spina bifida, are multifactorial diseases that occur with an incidence of 1 in 300 births in the United Kingdom. Mouse models have indicated that deregulated expression of the gene encoding the platelet-derived growth factor alpha-receptor (Pdgfra) causes congenital NTDs (refs. 2-4), whereas mutant forms of Pax-1 that have been associated with NTDs cause deregulated activation of the human PDGFRA promoter. There is an increasing awareness that genetic polymorphisms may have an important role in the susceptibility for NTDs (ref. 6). Here we identify five different haplotypes in the human PDGFRA promoter, of which the two most abundant ones, designated H1 and H2 alpha, differ in at least six polymorphic sites. In a transient transfection assay in human bone cells, the five haplotypes differ strongly in their ability to enhance reporter gene activity. In a group of patients with sporadic spina bifida, haplotypes with low transcriptional activity, including H1, were under-represented, whereas those with high transcriptional activity, including H2 alpha, were over-represented. When testing for haplotype combinations, H1 homozygotes were fully absent from the group of sporadic patients, whereas H1/H2 alpha heterozygotes were over-represented in the groups of both sporadic and familial spina bifida patients, but strongly under-represented in unrelated controls. Our data indicate that specific combinations of naturally occurring PDGFRA promoter haplotypes strongly affect NTD genesis.


Subject(s)
Neural Tube Defects/genetics , Promoter Regions, Genetic/genetics , Receptor, Platelet-Derived Growth Factor alpha/genetics , Spinal Dysraphism/genetics , Genetic Predisposition to Disease , Haplotypes , Humans , Polymerase Chain Reaction , Polymorphism, Single-Stranded Conformational , Sequence Analysis, DNA
6.
Nat Genet ; 5(1): 74-8, 1993 Sep.
Article in English | MEDLINE | ID: mdl-8220428

ABSTRACT

In mouse, four genes have been found to undergo genomic imprinting resulting in differential expression of maternally and paternally inherited alleles. To determine whether the cognate genes are also subject to imprinting in humans, we have studied allele-specific expression patterns of insulin-like growth factor 2, IGF2-receptor and H19 in human fetal and adult tissues. In keeping with previous findings in mice, our results indicate that in human fetal tissues the paternal H19 alleles is inactive. IGF2 is monoallelically expressed in various tissues but surprisingly not in adult human liver. The human IGF2R gene, another classic example of imprinting in mice, was found to be expressed from both alleles. We provide the first direct evidence for differential imprinting in the human and murine genome.


Subject(s)
Genes , Mice/genetics , Receptor, IGF Type 2/genetics , Adult , Alleles , Animals , DNA, Complementary/genetics , Female , Fetus/metabolism , Gene Expression Regulation , Humans , Liver/embryology , Liver/metabolism , Male , Organ Specificity , Pedigree , Polymerase Chain Reaction , Species Specificity
7.
Nat Genet ; 13(1): 114-6, 1996 May.
Article in English | MEDLINE | ID: mdl-8673088

ABSTRACT

Cowden disease (CD) (MIM 158350), or multiple hamartoma syndrome, is a rare autosomal dominant familial cancer syndrome with a high risk of breast cancer. Its clinical features include a wide array of abnormalities but the main characteristics are hamartomas of the skin, breast, thyroid, oral mucosa and intestinal epithelium. The pathognomonic hamartomatous features of CD include multiple smooth facial papules, acral keratosis and multiple oral papillomas. The pathological hallmark of the facial papules are multiple trichilemmomas. Expression of the disease is variable and penetrance of the dermatological lesions is assumed to be virtually complete by the age of twenty. Central nervous system manifestations of CD were emphasized only recently and include megalencephaly, epilepsy and dysplastic gangliocytomas of the cerebellum (Lhermitte-Duclos disease, LDD). Early diagnosis is important since female patients with CD are at risk of developing breast cancer. Other lesions include benign and malignant disease of the thyroid, intestinal polyps and genitourinary abnormalities. To localize the gene for CD, an autosomal genome scan was performed. A total of 12 families were examined, resulting in a maximum lod score of 8.92 at theta = 0.02 with the marker D10S573 located on chromosome 10q22-23.


Subject(s)
Chromosome Deletion , Chromosomes, Human, Pair 10 , Hamartoma Syndrome, Multiple/genetics , Breast Neoplasms/epidemiology , Breast Neoplasms/genetics , Chromosome Mapping , Female , Genetic Linkage , Genetic Markers , Hamartoma Syndrome, Multiple/diagnosis , Humans , Lod Score , Male , Pedigree , Polymorphism, Genetic , Risk Factors , Software
8.
Int J Obes (Lond) ; 36(12): 1545-51, 2012 Dec.
Article in English | MEDLINE | ID: mdl-22270380

ABSTRACT

BACKGROUND: Circulating angiotensin-converting enzyme (ACE) was identified as a predictor of weight loss maintenance in overweight/obese women of the Diogenes project. OBJECTIVE: To investigate whether ACE acted also as a predictor in men of the Diogenes study and to compare it with that in women. DESIGN: Subjects, who lost ≥ 8% of body weight induced by low-caloric diet in an 8-week weight loss period, were assigned to weight loss maintenance with dietary intervention for 6 months. SUBJECTS: 125 overweight/obese healthy men from eight European countries who completed whole intervention. MEASUREMENTS: Concentrations and activity of serum ACE at baseline and after the 8-week weight loss, in addition to anthropometric and physiological parameters. RESULTS: Serum ACE concentration decreased by 11.3 ± 10.6% during the weight loss period in men. A greater reduction is associated with less body weight regain during the maintenance period (r=0.227, P=0.012). ACE change was able to predict a weight regain ≤ 20% after 6 months, with an odds ratio of 1.59 (95% confidence interval (CI): 1.09-2.33, P=0.016) for every 10% reduction, which was independent of body mass index and weight loss. The prediction power was weaker in men than in women, but without a significant sex difference (P=0.137). In pooled subjects (N=218), the odds ratio was 1.96 (95% CI: 1.46-2.64, P<0.001). CONCLUSIONS: A greater reduction of ACE during weight loss is favorable for weight maintenance in both men and women. This can offer useful information for personalized advice to improve weight loss maintenance. It also confirms the role of ACE in the metabolic pathways of weight regulation.


Subject(s)
Obesity/blood , Peptidyl-Dipeptidase A/blood , Weight Loss , Adult , Biomarkers/blood , Cross-Sectional Studies , Diet, Reducing , Energy Intake , Female , Humans , Male , Middle Aged , Predictive Value of Tests , Sex Distribution , Weight Gain
9.
Sci Rep ; 9(1): 4202, 2019 03 12.
Article in English | MEDLINE | ID: mdl-30862933

ABSTRACT

Body fat distribution is an important determinant of cardiometabolic health. Lower-body adipose tissue (AT) has protective characteristics as compared to upper-body fat, but the underlying depot-differences remain to be elucidated. Here, we compared the proteome and morphology of abdominal and femoral AT. Paired biopsies from abdominal and femoral subcutaneous AT were taken from eight overweight/obese (BMI ≥ 28 kg/m2) women with impaired glucose metabolism after an overnight fast. Proteins were isolated and quantified using liquid chromatography-mass spectrometry, and protein expression in abdominal and femoral subcutaneous AT was compared. Moreover, correlations between fat cell size and the proteome of both AT depots were determined. In total, 651 proteins were identified, of which 22 proteins tended to be differentially expressed between abdominal and femoral AT after removal of blood protein signals (p < 0.05). Proteins involved in cell structure organization and energy metabolism were differently expressed between AT depots. Fat cell size, which was higher in femoral AT, was significantly correlated with ADH1B, POSTN and LCP1. These findings suggest that there are only slight differences in protein expression between abdominal and femoral subcutaneous AT. It remains to be determined whether these differences, as well as differences in protein activity, contribute to functional and/or morphological differences between these fat depots.


Subject(s)
Abdominal Fat/metabolism , Obesity/metabolism , Proteome/metabolism , Subcutaneous Fat/metabolism , Abdominal Fat/pathology , Female , Humans , Middle Aged , Obesity/pathology , Proteomics , Subcutaneous Fat/pathology
10.
Int J Obes (Lond) ; 32(12): 1790-8, 2008 Dec.
Article in English | MEDLINE | ID: mdl-18957934

ABSTRACT

BACKGROUND: The postprandial responses in (an)orexigenic hormones and feelings of hunger are characterized by large inter-individual differences. Food intake regulation was shown earlier to be partly under genetic control. OBJECTIVE: This study aimed to determine whether the postprandial responses in (an)orexigenic hormones and parameters of food intake regulation are associated with single nucleotide polymorphisms (SNPs) in genes encoding for satiety hormones and their receptors. DESIGN: Peptide YY (PYY), glucagon-like peptide 1 and ghrelin levels, as well as feelings of hunger and satiety, were determined pre- and postprandially in 62 women and 41 men (age 31+/-14 years; body mass index 25.0+/-3.1 kg/m(2)). Dietary restraint, disinhibition and perceived hunger were determined using the three-factor eating questionnaire. SNPs were determined in the GHRL, GHSR, LEP, LEPR, PYY, NPY, NPY2R and CART genes. RESULTS: The postprandial response in plasma ghrelin levels was associated with SNPs in PYY (215G>C, P<0.01) and LEPR (326A>G and 688A>G, P<0.01), and in plasma PYY levels with SNPs in GHRL (-501A>C, P<0.05) and GHSR (477G>A, P<0.05). The postprandial response in feelings of hunger was characterized by an SNP-SNP interaction involving SNPs in LEPR and NPY2R (668A>G and 585T>C, P<0.05). Dietary restraint and disinhibition were associated with an SNP in GHSR (477G>A, P<0.05), and perceived hunger with SNPs in GHSR and NPY (477G>A and 204T>C, P<0.05). CONCLUSIONS: Part of the inter-individual variability in postprandial responses in (an)orexigenic hormones can be explained by genetic variation. These postprandial responses represent either long-term physiological adaptations to facilitate homeostasis or reinforce direct genetic effects.


Subject(s)
Hunger/physiology , Polymorphism, Single Nucleotide/genetics , Postprandial Period/genetics , Satiation/physiology , Adolescent , Adult , Appetite Regulation/genetics , Female , Ghrelin/blood , Glucagon-Like Peptide 1/blood , Homeostasis/genetics , Humans , Male , Middle Aged , Peptide YY/blood , Surveys and Questionnaires , Young Adult
12.
J Natl Cancer Inst ; 86(14): 1070-5, 1994 Jul 20.
Article in English | MEDLINE | ID: mdl-8021956

ABSTRACT

BACKGROUND: Genomic imprinting, resulting in the nonequivalence of expression of homologue genes depending on their parental origin, is an important determinant of the developmental potential of embryonic cells. The expression of two genes, one termed H19 and the other IGF2, has been found to be necessary for proper embryonal development in humans. Both the murine and human H19 and IGF2 genes are normally characterized by monoallelic expression. PURPOSE: Because testicular germ cell tumors of adults originate from an early germ cell and, to a certain extent, mimic normal embryonal development, we investigated the patterns of allelic expression of the H19 and IGF2 genes in these tumors to determine if genomic imprinting, or a disturbance of it, is involved in their pathogenesis. METHODS: Specimens of normal tissue and tumor tissue were obtained from 20 patients with testicular germ cell tumors; 10 of the patients had seminomas and 10 had nonseminomatous germ cell tumors. To determine if there was heterozygosity of the Alu I and Apa I restriction site polymorphism in the H19 and IGF2 genes, respectively, DNA was isolated from cells of the peripheral blood of these patients, then subjected to polymerase chain reaction (PCR) amplification, restriction enzyme digestion, and electrophoresis in agarose gels. If heterozygosity was determined, a similar analysis was performed on complementary DNA (cDNA) obtained from matched tumor RNA by reverse transcription and subsequent PCR amplification (RT-PCR). If monoallelic expression was found, matched tumor DNA was studied for possible deletions. RESULTS: Tumor samples from 14 of 20 and 11 of 20 patients were informative for allelic expression patterns of the H19 and IGF2 genes, respectively. Analysis of the products of RT-PCR showed biallelic expression of the H19 gene in 12 testicular germ cell tumors (patients numbered 6, 8-13, 15, 16, and 18-20) and of the IGF2 gene in 10 testicular germ cell tumors (patients numbered 1, 3, 6, 8-13, and 15-20). The three remaining tumors (patients numbered 2, 4, and 5) had lost the nonexpressed allele. CONCLUSIONS: In contrast to normally developing embryos, testicular germ cell tumors show a consistent expression of both parental alleles of the H19 and IGF2 genes. IMPLICATIONS: Testicular germ cell tumors of adults may develop from precursor cells in which the imprinting has been either erased or subjected to a consistent relaxation of its effect.


Subject(s)
Alleles , Gene Expression Regulation, Neoplastic/genetics , Germinoma/genetics , Testicular Neoplasms/genetics , Base Sequence , DNA, Neoplasm/genetics , Humans , Male , Molecular Sequence Data , Seminoma/genetics
13.
J Mol Biol ; 178(1): 47-62, 1984 Sep 05.
Article in English | MEDLINE | ID: mdl-6207303

ABSTRACT

Total steady-state RNA was extracted from nuclei of HeLa cells late after infection with adenovirus serotype 2. Most of the nuclear RNA is transcribed from the major late transcription unit (16.2 to 100.0 map units). To study the cleavage reactions involved in the splicing of leaders 1 and 2, we have used the S1 nuclease mapping technique with restriction fragments located in the region of intron 1 as DNA probes. The S1 mapping data showed that in total nuclear RNA, RNA species accumulate from which the 5' part of intron 1 has been excised, but which still contain the 3' part of the intron. This indicates that intron 1 can be removed in a stepwise fashion following the 5' to 3' direction. We have compared the nucleotide sequences from the ends of the putative processing intermediates. The internal cleavage sites do not resemble the consensus 5' or 3' splice site sequences. However, they show considerable homology to the sequence 5' A-T-G-A-T-G-G-C-A-T 3', which may act as a signal for internal cleavage. The intermediates are present in both the poly(A)+ and poly(A)- RNA fractions, although with different relative intensities. Primer extension experiments have been performed in which a primer, located with its left end in leader 2, is extended into intron 1. The results show that there may be a cleavage site as short as 35 nucleotides before the 3' splice site. Cleavage at the 3' splice site seems to be rapidly followed by ligation of leader 1 to leader 2. A model for RNA splicing based on these findings and data from the literature is presented.


Subject(s)
Adenoviruses, Human/genetics , Models, Genetic , Nucleic Acid Precursors/genetics , RNA Splicing , RNA, Messenger/genetics , RNA, Viral/genetics , Base Composition , Base Sequence , Electrophoresis, Polyacrylamide Gel , Endonucleases , HeLa Cells , Humans , Poly A , RNA/genetics , RNA Precursors , RNA, Small Nuclear , Single-Strand Specific DNA and RNA Endonucleases
14.
J Mol Biol ; 163(2): 239-56, 1983 Jan 15.
Article in English | MEDLINE | ID: mdl-6302268

ABSTRACT

Total rapidly labeled RNA was extracted from nuclei of HeLa cells late after infection with adenovirus type 2. Most of this nuclear RNA is transcribed from the major late transcription unit (16.2 to 100.0 map units (m.u.)). To study the cleavage reactions that are involved in RNA splicing, we used the S1 nuclease mapping technique with HindIII B (16.8 to 31.5 m.u.) and XhoI F (15.5 to 22.4 m.u.) restriction fragments as DNA probes. The S1 mapping data showed that both intron 1 (16.3 to 19.1 m.u.) and intron 2 (19.4 to 26.2 m.u.) can be excised in more than one step. Kinetic labeling and pulse--chase experiments demonstrated that certain cleavage sites in the RNA are used within three minutes after the start of transcription, while other cleavages occur only after a significant time-lag. The use of 5.6-dichloro-1-beta-D-ribofuranosylbenzimidazole enabled us to label the nuclear RNA exclusively from the 5' end. Such an approach showed that the first cleavages are introduced in the nascent RNA before the RNA polymerase has passed more than 2000 nucleotides beyond the cleavage site. The chronology of the appearance of processing intermediates that results from cleavage of the RNA indicates that preferentially intron 1 is removed before intron 2. This is an agreement with the finding that leader 1 is ligated to leader 2 before ligation of leader 2 to leader 3 takes place. However, we have found that alternative splicing pathways exist in the excision of introns 1 and 2, demonstrating that cleavage in intron 2 may occur before intron 1 is attacked by the splicing enzymes.


Subject(s)
Adenoviruses, Human/metabolism , RNA Splicing , RNA, Messenger/biosynthesis , RNA, Viral/biosynthesis , Base Sequence , DNA Restriction Enzymes , DNA, Recombinant , Endonucleases/metabolism , HeLa Cells , Humans , Kinetics , Nucleic Acid Hybridization , Ribonucleotides/analysis , Single-Strand Specific DNA and RNA Endonucleases , Transcription, Genetic
15.
J Mol Med (Berl) ; 74(11): 691-4, 1996 Nov.
Article in English | MEDLINE | ID: mdl-8956155

ABSTRACT

Periconceptional folate intake reduces both the occurrence and recurrence risk of neural tube defects. Plasma homocysteine levels can be elevated in mothers of a child with a neural tube defect, suggesting a dysfunctional folate metabolism. Very recently we showed that a common 677C-->T mutation in the 5,10-methylene tetrahydrofolate reductase gene, causing thermolability of the enzyme, is a risk factor for spina bifida offspring. Restriction enzyme analysis of the genomic 5,10-methylene tetrahydrofolate reductase polymerase chain reaction fragment revealed a significantly higher prevalence of a +/+ genotype among spina bifida patients and their mothers. The risk for spina bifida offspring is the strongest if both the mother and her child have the mutation in the homozygous state. Enzymatic analysis showed that homozygosity for the 677C-->T mutation causes a decreased 5,10-methylene tetrahydrofolate reductase activity, resulting in elevated plasma homocysteine and red blood cell folate levels and lowered plasma folate and cysteine values. This extended study demonstrates that a nucleotide substitution in the coding region of 5,10-methylene tetrahydrofolate reductase, resulting in reduced activity and an impaired homocysteine and folate metabolism, is a genetic risk factor for spina bifida.


Subject(s)
Oxidoreductases/genetics , Point Mutation/genetics , Spinal Dysraphism/metabolism , 5,10-Methylenetetrahydrofolate Reductase (FADH2) , Adult , Aged , Child , Cysteine/blood , Cysteine/metabolism , Female , Folic Acid/blood , Genetic Linkage , Genotype , Homocysteine/blood , Homocysteine/metabolism , Homozygote , Humans , Lod Score , Lymphocytes/enzymology , Lymphocytes/metabolism , Male , Methylenetetrahydrofolate Reductase (NADPH2) , Middle Aged , Netherlands , Oxidoreductases/deficiency , Risk Factors , Spinal Dysraphism/epidemiology , Vitamin B 12/blood , Vitamin B 12/metabolism
16.
J Invest Dermatol ; 103(3): 286-9, 1994 Sep.
Article in English | MEDLINE | ID: mdl-8077693

ABSTRACT

Ichthyosis bullosa of Siemens is a blistering disorder with autosomal dominant inheritance. The disease resembles bullous congenital ichthyosiform erythroderma but is less severe. Keratins K1 and K10 have been implicated in bullous congenital ichthyosiform erythroderma. Linkage analysis pointed to the involvement of a keratin type II gene (12q11-13) in ichthyosis bullosa of Siemens. Mutations in the highly conserved regions of K1, a member of the type II gene cluster, were excluded. The gene coding for keratin 2e is also located in the type II gene cluster and the expression of the gene coincides with the occurrence of epidermolytic hyperkeratosis. Sequence analysis revealed the presence of mutations in the K2e gene in patients with ichthyosis bullosa of Siemens. Three different mutations were detected, one in the 1A domain and two in the 2B domain of the rod. Furthermore, histologic and ultrastructural examination of skin biopsies indicated that ichthyosis exfoliativa is identical to ichthyosis bullosa of Siemens. This was confirmed by the results of the molecular analysis. In the family diagnosed as ichthyosis exfoliativa, a mutation was detected that was identical to the mutation found in one of the families with ichthyosis bullosa of Siemens.


Subject(s)
Genes , Ichthyosis/genetics , Mutation , Adult , Base Sequence , Humans , Ichthyosis/pathology , Male , Molecular Probes/genetics , Molecular Sequence Data , Pedigree , Skin/pathology
17.
J Invest Dermatol ; 111(6): 1224-6, 1998 Dec.
Article in English | MEDLINE | ID: mdl-9856846

ABSTRACT

Defective keratins are the cause of a number of hereditary disorders of the epidermis and other epithelia. The disease-causing mutations in keratins are clustered in the rod domain, and mutations in the helix boundary peptides cause the most severe forms of epidermal fragility syndromes. Siemens described a family with an atypical, mild form of bullous congenital ichthyosiform erythroderma. Linkage analysis in this family indicated that a defective type II keratin might be the underlying cause, keratins K1 and K2e being the best candidates. A substitution of valine for aspartic acid was detected at position 340 (D340V) in the L12 region of the K1 polypeptide. The mutation was found to cosegregate with the disorder in the family. Herewith, a genotype-phenotype correlation is shown for bullous congenital ichthyosiform erythroderma comparable with that described for epidermolysis bullosa simplex.


Subject(s)
Hyperkeratosis, Epidermolytic/genetics , Keratins/genetics , Genetic Linkage/genetics , Humans , Hyperkeratosis, Epidermolytic/pathology , Keratins/chemistry , Lod Score , Microscopy, Electron , Mutation , Pedigree , Protein Structure, Tertiary
18.
J Invest Dermatol ; 103(3): 282-5, 1994 Sep.
Article in English | MEDLINE | ID: mdl-7521372

ABSTRACT

Ichthyosis bullosa of Siemens is an autosomal dominant disease characterized by mild hyperkeratosis and blistering. Autosomal dominant ichthyosis exfoliativa is a recently described disease with clinical features similar to ichthyosis bullosa of Siemens, but in contrast to ichthyosis bullosa of Siemens no histologic signs typical for epidermolytic hyperkeratosis are observed. We used linkage analysis to test whether keratin gene mutations might underlie both diseases. This analysis showed linkage of both disorders with the region of chromosome 12 in which the keratin type II gene cluster is located. The keratin type I gene cluster on chromosome 17 is excluded. These data, combined with clinical observations, strongly suggest that the genes coding for keratin 1 or keratin 2e, both expressed in the suprabasal compartment of the epidermis and located in the type II gene cluster, are candidate genes for ichthyosis bullosa of Siemens and ichthyosis exfoliativa.


Subject(s)
Genes, Dominant , Genetic Linkage , Ichthyosis/genetics , Keratins/genetics , Multigene Family , Base Sequence , Genetic Markers , Humans , Ichthyosis/pathology , Keratin-2 , Molecular Probes/genetics , Molecular Sequence Data , Pedigree
19.
J Clin Endocrinol Metab ; 84(3): 1136-40, 1999 Mar.
Article in English | MEDLINE | ID: mdl-10084607

ABSTRACT

Herein, we report mutation analysis of the LH receptor gene in 17 males with LH-independent precocious puberty, of which 8 were familial and 9 had a negative family history. A total of 7 different mutations (all previously reported) were detected in 12 patients. Among 10 European familial male-limited precocious puberty (FMPP) patients who had a LH receptor gene mutation, none had the Asp578Gly mutation, which is responsible for the vast majority of cases in the U.S. The restricted number of activating mutations of the LH receptor observed in this and other studies of FMPP strongly suggests that an activating phenotype is associated with very specific sites in the receptor protein. Clinical follow-up of the 5 patients who did not have LH receptor mutations shows that such cases most likely do not have true FMPP. LH receptor mutation analysis provides a sensitive tool for distinguishing true FMPP from other causes of early-onset LH-independent puberty in males.


Subject(s)
Luteinizing Hormone/physiology , Mutation/genetics , Puberty, Precocious/genetics , Receptors, LH/genetics , Amino Acid Sequence/genetics , Child , Cyclic AMP/biosynthesis , DNA Mutational Analysis , Humans , Male
20.
Eur J Hum Genet ; 7(1): 68-76, 1999 Jan.
Article in English | MEDLINE | ID: mdl-10094193

ABSTRACT

The nail patella syndrome (NPS1) is an autosomal dominant disorder characterised by dysplasia of the finger nails and skeletal abnormalities. NPS1 has been mapped to 9q34, to a 1 cM interval between D9S315 and the adenylate kinase gene (AK1). We have mapped the breakpoints within the candidate NPS1 region in two unrelated patients with balanced translocations. One patient [46,XY,t(1;9)(q32.1;q34)] was detected during a systematic survey of old cytogenetic files in Denmark and southern Sweden. The other patient [46,XY,t(9;17)(q34.1;q25)] was reported previously. D9S315 and AK1 were used to isolate YACs, from which endclones were used to isolate PACs. Two overlapping PAC clones span the 9q34 breakpoints in both patients, suggesting that NPS1 is caused by haploinsufficiency due to truncation or otherwise inactivation of a gene at or in the vicinity of the breakpoints.


Subject(s)
Chromosome Fragility , Chromosomes, Human, Pair 9 , Nail-Patella Syndrome/genetics , Chromosomes, Artificial, Yeast , Cloning, Molecular , Humans , In Situ Hybridization, Fluorescence , Infant , Translocation, Genetic
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